Asmt (acetylserotonin O-methyltransferase) - Rat Genome Database

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Gene: Asmt (acetylserotonin O-methyltransferase) Rattus norvegicus
Analyze
Symbol: Asmt
Name: acetylserotonin O-methyltransferase
RGD ID: 708472
Description: Enables acetylserotonin O-methyltransferase activity. Involved in melatonin biosynthetic process. Orthologous to human ASMT (acetylserotonin O-methyltransferase); PARTICIPATES IN methionine cycle/metabolic pathway; tryptophan metabolic pathway; INTERACTS WITH acetamide; acrylamide; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: acetylserotonin O-methyltransferase variant 2; acetylserotonin O-methyltransferase variant 3; hydroxyindole O-methyltransferase; hydroxyindole-O-methyltransferase; LOC246281
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81221,418,477 - 21,423,336 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1221,418,487 - 21,423,336 (-)EnsemblGRCr8
mRatBN7.21216,304,719 - 16,309,568 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1216,304,719 - 16,309,568 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1217,121,663 - 17,126,630 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01217,745,387 - 17,750,355 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01216,808,300 - 16,813,148 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1222,900,733 - 22,905,700 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive1222,826,548 - 22,831,515 (-)NCBILyon_Normotensive
Lyon_Hypertensive1221,686,405 - 21,691,371 (-)NCBILyon_Hypertensive
F344_StmMcwi1232,275,864 - 32,280,831 (-)NCBIF344_StmMcwi
Rnor_6.01218,521,383 - 18,527,036 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1218,521,401 - 18,526,250 (-)Ensemblrn6Rnor6.0
Rnor_5.01220,506,337 - 20,511,600 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41216,811,892 - 16,817,186 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1218,054,424 - 18,059,273 (-)NCBICelera
RGSC_v3.11216,841,819 - 16,847,116 (-)NCBI
Cytogenetic Map12q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Circadian regulation of hydroxyindole-O-methyltransferase mRNA levels in rat pineal and retina. Gauer F and Craft CM, Brain Res 1996 Oct 21;737(1-2):99-109.
3. Stimulatory effects of LH on release of melatonin and activities of its synthesizing enzymes NAT and HIOMT in organ-cultured pineal glands of female rats. Hosaka T, etal., Horm Metab Res 2002 Aug;34(8):441-5.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
6. GOA pipeline RGD automated data pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:3941912   PMID:20308563   PMID:21437622   PMID:22775292   PMID:26950199   PMID:31124080   PMID:39149125  


Genomics

Comparative Map Data
Asmt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81221,418,477 - 21,423,336 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1221,418,487 - 21,423,336 (-)EnsemblGRCr8
mRatBN7.21216,304,719 - 16,309,568 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1216,304,719 - 16,309,568 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1217,121,663 - 17,126,630 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01217,745,387 - 17,750,355 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01216,808,300 - 16,813,148 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1222,900,733 - 22,905,700 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive1222,826,548 - 22,831,515 (-)NCBILyon_Normotensive
Lyon_Hypertensive1221,686,405 - 21,691,371 (-)NCBILyon_Hypertensive
F344_StmMcwi1232,275,864 - 32,280,831 (-)NCBIF344_StmMcwi
Rnor_6.01218,521,383 - 18,527,036 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1218,521,401 - 18,526,250 (-)Ensemblrn6Rnor6.0
Rnor_5.01220,506,337 - 20,511,600 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41216,811,892 - 16,817,186 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1218,054,424 - 18,059,273 (-)NCBICelera
RGSC_v3.11216,841,819 - 16,847,116 (-)NCBI
Cytogenetic Map12q11NCBI
ASMT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38Y1,615,059 - 1,643,081 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38X1,615,059 - 1,643,081 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX1,615,059 - 1,643,081 (+)Ensemblhg38GRCh38
GRCh38.p14 EnsemblY1,615,059 - 1,643,081 (+)Ensemblhg38GRCh38
GRCh37X1,733,952 - 1,761,974 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh37Y1,683,952 - 1,711,974 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36Y1,674,348 - 1,721,974 (+)NCBIBuild 36Build 36hg18NCBI36
Build 36X1,674,348 - 1,721,974 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34Y1,758,174 - 1,805,801NCBI
CeleraX5,992,483 - 6,035,986 (+)NCBICelera
Cytogenetic MapX;YNCBI
CHM1_1X1,744,907 - 1,789,431 (+)NCBICHM1_1
T2T-CHM13v2.0X1,416,353 - 1,441,907 (+)NCBIT2T-CHM13v2.0
T2T-CHM13v2.0Y1,478,823 - 1,502,882 (+)NCBIT2T-CHM13v2.0
Asmt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X169,106,379 - 169,111,787 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX169,106,280 - 169,112,125 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38X170,672,644 - 170,678,054 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX170,672,644 - 170,678,054 (+)Ensemblmm10GRCm38
Cytogenetic MapXF5NCBI
Asmt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554991,131,588 - 1,152,802 (+)Ensembl
ChiLan1.0NW_0049554991,131,637 - 1,151,861 (+)NCBIChiLan1.0ChiLan1.0
ASMT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X1,498,204 - 1,540,311 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1-v2Y45,410,535 - 45,444,147 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1Y1,514,466 - 1,544,183 (+)NCBINHGRI_mPanPan1
NHGRI_mPanPan1X1,513,326 - 1,543,959 (+)NCBINHGRI_mPanPan1
PanPan1.1X1,737,699 - 1,772,983 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX1,749,371 - 1,772,916 (+)EnsemblpanPan2panpan1.1
ASMT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X1,012,952 - 1,025,684 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX1,012,961 - 1,025,263 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_TashaX957,221 - 969,532 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0X927,859 - 940,066 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX927,859 - 940,057 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X919,275 - 931,589 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X936,207 - 948,529 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X972,568 - 984,887 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Asmt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404953666,394 - 669,387 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366443,707,365 - 3,708,601 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC110258194
(Sus scrofa - pig)		 No map positions available.
ASMT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X1,838 - 12,924 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660561,759,444 - 1,802,665 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Asmt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624834747,233 - 757,071 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Asmt
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11614,891,895 - 14,897,203 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Asmt
22 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:139
Count of miRNA genes:104
Interacting mature miRNAs:108
Transcripts:ENSRNOT00000001791
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12592191825247790Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)122013902826430640Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121120049452308831Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)12129775522Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12348941648489416Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12138687564Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121847304152308831Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049752308831Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)121526424852308831Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12133700600Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)121174352852308831Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)12138635130Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12128133365Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)121223300030490641Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121746497946784661Rat
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)12128606299Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121618743852308831Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)12133700556Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121613502952308831Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121618743851213550Rat
1331763Wbc2White blood cell count QTL 23.162leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)121120049452308831Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121874946936488809Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)12124849755Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)61120049452308831Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12141361854Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121874946934312613Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12274769447747694Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121847304152308831Rat
2303568Bw88Body weight QTL 883body mass (VT:0001259)body weight (CMO:0000012)12128606299Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12308718048087180Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)12563330650633306Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121613502952308831Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12790162533938215Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121618743833700556Rat

Markers in Region
RH130065  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21216,304,348 - 16,304,544 (+)MAPPERmRatBN7.2
Rnor_6.01218,521,031 - 18,521,226NCBIRnor6.0
Rnor_5.01220,505,985 - 20,506,180UniSTSRnor5.0
RGSC_v3.41216,811,522 - 16,811,717UniSTSRGSC3.4
Celera1218,054,054 - 18,054,249UniSTS
Cytogenetic Map12q11UniSTS
RH131804  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21216,310,433 - 16,310,614 (+)MAPPERmRatBN7.2
Rnor_6.01218,527,116 - 18,527,296NCBIRnor6.0
Rnor_5.01220,512,070 - 20,512,250UniSTSRnor5.0
RGSC_v3.41216,818,052 - 16,818,232UniSTSRGSC3.4
Celera1218,060,139 - 18,060,319UniSTS
RH 3.4 Map12255.7UniSTS
Cytogenetic Map12q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
14 11 60 152 54 52 22 65 22 6 273 158 11 129 72 92 30 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000001791   ⟹   ENSRNOP00000001791
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1221,418,487 - 21,423,336 (-)Ensembl
mRatBN7.2 Ensembl1216,304,719 - 16,309,568 (-)Ensembl
Rnor_6.0 Ensembl1218,521,401 - 18,526,250 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000118860   ⟹   ENSRNOP00000086577
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1221,418,487 - 21,423,336 (-)Ensembl
mRatBN7.2 Ensembl1216,304,719 - 16,309,568 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000160133   ⟹   ENSRNOP00000110283
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1221,418,487 - 21,423,336 (-)Ensembl
RefSeq Acc Id: NM_144759   ⟹   NP_653360
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81221,418,487 - 21,423,336 (-)NCBI
mRatBN7.21216,304,719 - 16,309,568 (-)NCBI
Dahl_SR_JrHsd1222,900,733 - 22,905,700 (-)NCBI
Lyon_Normotensive1222,826,548 - 22,831,515 (-)NCBI
Lyon_Hypertensive1221,686,405 - 21,691,371 (-)NCBI
F344_StmMcwi1232,275,864 - 32,280,831 (-)NCBI
Rnor_6.01218,521,401 - 18,526,250 (-)NCBI
Rnor_5.01220,506,337 - 20,511,600 (-)NCBI
RGSC_v3.41216,811,892 - 16,817,186 (-)RGD
Celera1218,054,424 - 18,059,273 (-)RGD
Sequence:
RefSeq Acc Id: XM_063271046   ⟹   XP_063127116
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81221,418,477 - 21,422,784 (-)NCBI
RefSeq Acc Id: NP_653360   ⟸   NM_144759
- UniProtKB: O09179 (UniProtKB/Swiss-Prot),   B3GSH5 (UniProtKB/Swiss-Prot),   A0A3G1CV13 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000001791   ⟸   ENSRNOT00000001791
Ensembl Acc Id: ENSRNOP00000086577   ⟸   ENSRNOT00000118860
RefSeq Acc Id: XP_063127116   ⟸   XM_063271046
- Peptide Label: isoform X1
- UniProtKB: A0A3G1CV13 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000110283   ⟸   ENSRNOT00000160133
Protein Domains
O-methyltransferase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B3GSH5-F1-model_v2 AlphaFold B3GSH5 1-432 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:708472 AgrOrtholog
BioCyc Gene G2FUF-19849 BioCyc
BioCyc Pathway PWY-6030 [serotonin and melatonin biosynthesis] BioCyc
BioCyc Pathway Image PWY-6030 BioCyc
Ensembl Genes ENSRNOG00000001324 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000001791 ENTREZGENE
  ENSRNOT00000001791.7 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.10.10 UniProtKB/Swiss-Prot
  3.40.50.150 UniProtKB/Swiss-Prot
InterPro O-MeTrfase_COMT UniProtKB/Swiss-Prot
  O_MeTrfase_dom UniProtKB/Swiss-Prot
  Plant_O-MeTrfase_dimerisation UniProtKB/Swiss-Prot
  SAM-dependent_MTases UniProtKB/Swiss-Prot
  WH-like_DNA-bd_sf UniProtKB/Swiss-Prot
  WH_DNA-bd_sf UniProtKB/Swiss-Prot
KEGG Report rno:246281 UniProtKB/Swiss-Prot
NCBI Gene 246281 ENTREZGENE
PANTHER O-METHYLTRANSFERASE CICE UniProtKB/Swiss-Prot
  PUTATIVE (AFU_ORTHOLOGUE AFUA_4G14580)-RELATED UniProtKB/Swiss-Prot
Pfam Dimerisation UniProtKB/Swiss-Prot
  Methyltransf_2 UniProtKB/Swiss-Prot
PhenoGen Asmt PhenoGen
PROSITE SAM_OMT_II UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000001324 RatGTEx
Superfamily-SCOP SSF46785 UniProtKB/Swiss-Prot
  SSF53335 UniProtKB/Swiss-Prot
UniProt A0A3G1CV13 ENTREZGENE, UniProtKB/TrEMBL
  A0A3G1CV17_RAT UniProtKB/TrEMBL
  A0ABK0LYF5_RAT UniProtKB/TrEMBL
  ASMT_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  O09179 ENTREZGENE
UniProt Secondary O09179 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Asmt  acetylserotonin O-methyltransferase  LOC246281  hydroxyindole-O-methyltransferase  Symbol and Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_expression expressed in pineal and retina 1299464