Colq (collagen like tail subunit of asymmetric acetylcholinesterase) - Rat Genome Database

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Gene: Colq (collagen like tail subunit of asymmetric acetylcholinesterase) Rattus norvegicus
Analyze
Symbol: Colq
Name: collagen like tail subunit of asymmetric acetylcholinesterase
RGD ID: 2377
Description: Enables heparin binding activity. Predicted to act upstream of or within establishment of protein localization to membrane; regulation of synaptic assembly at neuromuscular junction; and skeletal muscle acetylcholine-gated channel clustering. Predicted to be located in neuromuscular junction. Predicted to be part of collagen trimer. Human ortholog(s) of this gene implicated in congenital myasthenic syndrome 5. Orthologous to human COLQ (collagen like tail subunit of asymmetric acetylcholinesterase); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: acetylcholinesterase collagenic tail peptide; acetylcholinesterase-associated collagen; AChE Q subunit; collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase; collagen-like tail subunit of asymmetric acetylcholinesterase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,738,251 - 6,830,492 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl166,738,251 - 6,793,501 (-)EnsemblGRCr8
mRatBN7.2166,731,850 - 6,824,973 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,731,858 - 6,787,107 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx166,744,228 - 6,799,552 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0167,889,123 - 7,944,453 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0166,751,954 - 6,807,065 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0167,626,380 - 7,681,621 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,627,603 - 7,681,576 (-)Ensemblrn6Rnor6.0
Rnor_5.0167,553,135 - 7,608,336 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4166,975,587 - 7,035,001 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera168,403,494 - 8,458,629 (+)NCBICelera
RGSC_v3.1166,975,584 - 7,034,999 (-)NCBI
Cytogenetic Map16p16NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Two different heparin-binding domains in the triple-helical domain of ColQ, the collagen tail subunit of synaptic acetylcholinesterase. Deprez P, etal., J Biol Chem 2003 Jun 27;278(26):23233-42.
2. Genetic analysis of collagen Q: roles in acetylcholinesterase and butyrylcholinesterase assembly and in synaptic structure and function. Feng G, etal., J Cell Biol 1999 Mar 22;144(6):1349-60.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. The mammalian gene of acetylcholinesterase-associated collagen. Krejci E, etal., J Biol Chem 1997 Sep 5;272(36):22840-7.
6. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
7. Human endplate acetylcholinesterase deficiency caused by mutations in the collagen-like tail subunit (ColQ) of the asymmetric enzyme. Ohno K, etal., Proc Natl Acad Sci U S A 1998 Aug 4;95(16):9654-9.
8. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
9. Online Mendelian Inheritance in Man, OMIM (TM). Online Mendelian Inheritance in Man, OMIM (TM).
10. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
Additional References at PubMed
PMID:18373559   PMID:18511416   PMID:20053883   PMID:20153305   PMID:20188715   PMID:22944068   PMID:23159887  


Genomics

Comparative Map Data
Colq
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,738,251 - 6,830,492 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl166,738,251 - 6,793,501 (-)EnsemblGRCr8
mRatBN7.2166,731,850 - 6,824,973 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,731,858 - 6,787,107 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx166,744,228 - 6,799,552 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0167,889,123 - 7,944,453 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0166,751,954 - 6,807,065 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0167,626,380 - 7,681,621 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,627,603 - 7,681,576 (-)Ensemblrn6Rnor6.0
Rnor_5.0167,553,135 - 7,608,336 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4166,975,587 - 7,035,001 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera168,403,494 - 8,458,629 (+)NCBICelera
RGSC_v3.1166,975,584 - 7,034,999 (-)NCBI
Cytogenetic Map16p16NCBI
COLQ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38315,450,133 - 15,521,706 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl315,450,132 - 15,521,928 (-)Ensemblhg38GRCh38
GRCh37315,491,640 - 15,563,213 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36315,466,644 - 15,538,262 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34315,466,644 - 15,538,262NCBI
Celera315,429,870 - 15,501,486 (-)NCBICelera
Cytogenetic Map3p25.1NCBI
HuRef315,426,974 - 15,498,632 (-)NCBIHuRef
CHM1_1315,442,518 - 15,514,124 (-)NCBICHM1_1
T2T-CHM13v2.0315,452,540 - 15,524,108 (-)NCBIT2T-CHM13v2.0
Colq
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391431,245,039 - 31,299,820 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1431,245,039 - 31,313,300 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381431,523,082 - 31,577,863 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1431,523,082 - 31,591,343 (-)Ensemblmm10GRCm38
MGSCv371432,336,270 - 32,390,569 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361430,352,091 - 30,406,392 (-)NCBIMGSCv36mm8
Celera1427,782,091 - 27,835,024 (-)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.18NCBI
Colq
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554301,956,375 - 2,019,598 (-)Ensembl
ChiLan1.0NW_0049554301,956,833 - 2,019,581 (-)NCBIChiLan1.0ChiLan1.0
COLQ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2215,430,081 - 15,506,898 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1315,434,653 - 15,511,662 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0315,373,589 - 15,447,613 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1315,712,630 - 15,784,299 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl315,712,630 - 15,784,299 (-)EnsemblpanPan2panpan1.1
Colq
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118169,757,170 - 169,802,383 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364732,877,568 - 2,939,840 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364732,877,543 - 2,941,374 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COLQ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl132,677,740 - 2,755,307 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1132,677,738 - 2,755,635 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2132,604,003 - 2,681,981 (-)NCBISscrofa10.2Sscrofa10.2susScr3
COLQ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11560,284,557 - 60,395,745 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604133,316,392 - 33,386,225 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Colq
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248225,163,506 - 5,222,134 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248225,162,989 - 5,222,140 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Colq
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1137,247,179 - 7,283,609 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Colq
841 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:162
Count of miRNA genes:125
Interacting mature miRNAs:136
Transcripts:ENSRNOT00000026550, ENSRNOT00000066434
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16423421216278352Rat
1549842Bp248Blood pressure QTL 2480.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1638712345387123Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133425095Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139568015Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16423421253708481Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16474422249744222Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16423421216278352Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16126734272Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126734272Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16435482249354822Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)1638712345387123Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16423421249757901Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16423421266955197Rat
737825Alc13Alcohol consumption QTL 134.5consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16423421216061395Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139568015Rat
631524Bp75Blood pressure QTL 750.05arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)161177108157035Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683908666195506Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338679049757901Rat
1300133Rf24Renal function QTL 243.64blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)16338679026128267Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683908666195506Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683908666195506Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126734272Rat
61372Bp40Blood pressure QTL 402.2blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)16423433317730812Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683908652786090Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683908666195506Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16330168348301683Rat

Markers in Region
D16Got91  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,771,741 - 6,771,917 (+)MAPPERmRatBN7.2
Rnor_6.0167,666,258 - 7,666,433NCBIRnor6.0
Rnor_5.0167,592,973 - 7,593,148UniSTSRnor5.0
RGSC_v3.4167,019,148 - 7,019,324RGDRGSC3.4
RGSC_v3.4167,019,149 - 7,019,324UniSTSRGSC3.4
Celera168,418,608 - 8,418,885UniSTS
RGSC_v3.1167,019,147 - 7,019,322RGD
RH 3.4 Map1656.6UniSTS
RH 3.4 Map1656.6RGD
RH 2.0 Map1610.7RGD
Cytogenetic Map16p16UniSTS
AI228720  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,756,204 - 6,756,335 (+)MAPPERmRatBN7.2
Rnor_6.0167,650,722 - 7,650,852NCBIRnor6.0
Rnor_5.0167,577,437 - 7,577,567UniSTSRnor5.0
RGSC_v3.4167,003,613 - 7,003,743UniSTSRGSC3.4
Celera168,434,297 - 8,434,427UniSTS
RH 3.4 Map1657.7UniSTS
Cytogenetic Map16p16UniSTS
RH137426  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,732,934 - 6,733,128 (+)MAPPERmRatBN7.2
Rnor_6.0167,627,370 - 7,627,563NCBIRnor6.0
Rnor_5.0167,554,125 - 7,554,318UniSTSRnor5.0
RGSC_v3.4166,976,665 - 6,976,858UniSTSRGSC3.4
Celera168,457,446 - 8,457,639UniSTS
RH 3.4 Map1659.6UniSTS
Cytogenetic Map16p16UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
14 12 77 175 76 77 46 73 46 6 342 181 11 160 93 98 31 22 22

Sequence


Ensembl Acc Id: ENSRNOT00000026550   ⟹   ENSRNOP00000026550
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,738,251 - 6,793,501 (-)Ensembl
mRatBN7.2 Ensembl166,731,858 - 6,787,107 (-)Ensembl
Rnor_6.0 Ensembl167,627,603 - 7,681,576 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000116491   ⟹   ENSRNOP00000079120
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,738,251 - 6,793,501 (-)Ensembl
mRatBN7.2 Ensembl166,731,858 - 6,787,107 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000116928   ⟹   ENSRNOP00000097353
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,738,251 - 6,774,408 (-)Ensembl
mRatBN7.2 Ensembl166,731,858 - 6,767,868 (-)Ensembl
RefSeq Acc Id: NM_019274   ⟹   NP_062147
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,738,251 - 6,793,501 (-)NCBI
mRatBN7.2166,731,850 - 6,787,107 (-)NCBI
Rnor_6.0167,626,380 - 7,681,621 (-)NCBI
Rnor_5.0167,553,135 - 7,608,336 (-)NCBI
RGSC_v3.4166,975,587 - 7,035,001 (-)RGD
Celera168,403,494 - 8,458,629 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039094438   ⟹   XP_038950366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,738,258 - 6,785,803 (-)NCBI
mRatBN7.2166,731,850 - 6,779,275 (-)NCBI
RefSeq Acc Id: XM_039094439   ⟹   XP_038950367
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,738,258 - 6,785,803 (-)NCBI
mRatBN7.2166,731,850 - 6,772,035 (-)NCBI
RefSeq Acc Id: XM_039094440   ⟹   XP_038950368
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,738,258 - 6,830,492 (-)NCBI
mRatBN7.2166,731,850 - 6,824,973 (-)NCBI
RefSeq Acc Id: XM_063275284   ⟹   XP_063131354
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,738,258 - 6,785,801 (-)NCBI
RefSeq Acc Id: XM_063275285   ⟹   XP_063131355
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,752,369 - 6,793,487 (-)NCBI
RefSeq Acc Id: NP_062147   ⟸   NM_019274
- Peptide Label: precursor
- UniProtKB: O35167 (UniProtKB/Swiss-Prot),   F1M6X2 (UniProtKB/TrEMBL),   A6KFY6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000026550   ⟸   ENSRNOT00000026550
RefSeq Acc Id: XP_038950368   ⟸   XM_039094440
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038950366   ⟸   XM_039094438
- Peptide Label: isoform X1
- UniProtKB: O35167 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038950367   ⟸   XM_039094439
- Peptide Label: isoform X2
- UniProtKB: O35167 (UniProtKB/Swiss-Prot),   A0A8I6GM12 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000079120   ⟸   ENSRNOT00000116491
Ensembl Acc Id: ENSRNOP00000097353   ⟸   ENSRNOT00000116928
RefSeq Acc Id: XP_063131354   ⟸   XM_063275284
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063131355   ⟸   XM_063275285
- Peptide Label: isoform X4
Protein Domains
Collagen-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35167-F1-model_v2 AlphaFold O35167 1-458 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2377 AgrOrtholog
BioCyc Gene G2FUF-12138 BioCyc
Ensembl Genes ENSRNOG00000019615 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000026550 ENTREZGENE
  ENSRNOT00000116928 ENTREZGENE
InterPro Collagen UniProtKB/Swiss-Prot
  Collagen_superfamily UniProtKB/Swiss-Prot
  Myxo_disulph_rpt UniProtKB/Swiss-Prot
KEGG Report rno:29755 UniProtKB/Swiss-Prot
NCBI Gene 29755 ENTREZGENE
PANTHER ACETYLCHOLINESTERASE COLLAGENIC TAIL PEPTIDE UniProtKB/Swiss-Prot
  COLLAGEN ALPHA UniProtKB/Swiss-Prot
Pfam Collagen UniProtKB/Swiss-Prot
PhenoGen Colq PhenoGen
RatGTEx ENSRNOG00000019615 RatGTEx
TIGR TC230759
UniProt A0A8I5ZM34_RAT UniProtKB/TrEMBL
  A0A8I6GM12 ENTREZGENE, UniProtKB/TrEMBL
  A6KFY5_RAT UniProtKB/TrEMBL
  A6KFY6 ENTREZGENE, UniProtKB/TrEMBL
  COLQ_RAT UniProtKB/Swiss-Prot
  F1M6X2 ENTREZGENE, UniProtKB/TrEMBL
  O35167 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-29 Colq  collagen like tail subunit of asymmetric acetylcholinesterase  Colq  collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Colq  collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase      Name updated 70584 APPROVED