Zfp322a (zinc finger protein 322a) - Rat Genome Database

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Gene: Zfp322a (zinc finger protein 322a) Rattus norvegicus
Analyze
Symbol: Zfp322a
Name: zinc finger protein 322a
RGD ID: 1594230
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in positive regulation of stem cell population maintenance and regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human ZNF322 (zinc finger protein 322); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC680201; similar to zinc finger protein 322a; zinc finger protein 322
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81742,201,989 - 42,216,060 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1742,200,956 - 42,279,388 (+)EnsemblGRCr8
mRatBN7.21741,773,789 - 41,789,654 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1741,773,782 - 41,790,078 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1741,853,775 - 41,867,788 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01743,457,832 - 43,471,845 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01741,733,195 - 41,747,208 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01744,025,036 - 44,040,900 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1744,025,267 - 44,039,284 (+)Ensemblrn6Rnor6.0
Rnor_5.01745,878,427 - 45,894,295 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41748,978,049 - 48,992,066 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1741,403,651 - 41,417,666 (+)NCBICelera
Cytogenetic Map17p11NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA,ISO)
cytosol  (ISO)
nucleoplasm  (ISO)
nucleus  (IBA,IEA,ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:24550733  


Genomics

Comparative Map Data
Zfp322a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81742,201,989 - 42,216,060 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1742,200,956 - 42,279,388 (+)EnsemblGRCr8
mRatBN7.21741,773,789 - 41,789,654 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1741,773,782 - 41,790,078 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1741,853,775 - 41,867,788 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01743,457,832 - 43,471,845 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01741,733,195 - 41,747,208 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01744,025,036 - 44,040,900 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1744,025,267 - 44,039,284 (+)Ensemblrn6Rnor6.0
Rnor_5.01745,878,427 - 45,894,295 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41748,978,049 - 48,992,066 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1741,403,651 - 41,417,666 (+)NCBICelera
Cytogenetic Map17p11NCBI
ZNF322
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38626,634,383 - 26,659,746 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl626,634,383 - 26,659,759 (-)Ensemblhg38GRCh38
GRCh37626,634,611 - 26,659,974 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36626,742,590 - 26,767,942 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34626,744,497 - 26,767,741NCBI
Celera627,863,913 - 27,889,235 (-)NCBICelera
Cytogenetic Map6p22.2NCBI
HuRef626,578,016 - 26,603,379 (-)NCBIHuRef
CHM1_1626,636,675 - 26,662,014 (-)NCBICHM1_1
T2T-CHM13v2.0626,502,803 - 26,528,154 (-)NCBIT2T-CHM13v2.0
Zfp322a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391323,537,273 - 23,553,378 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1323,537,273 - 23,553,378 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381323,353,103 - 23,369,208 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1323,353,103 - 23,369,208 (-)Ensemblmm10GRCm38
MGSCv371323,444,973 - 23,461,071 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361323,362,807 - 23,376,634 (-)NCBIMGSCv36mm8
Celera1323,585,423 - 23,601,520 (-)NCBICelera
Cytogenetic Map13A3.1NCBI
cM Map139.55NCBI
Znf322
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955483243,819 - 262,593 (+)NCBIChiLan1.0ChiLan1.0
ZNF322
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2541,278,573 - 41,304,377 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1637,280,051 - 37,305,855 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0626,466,052 - 26,491,433 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1627,123,571 - 27,148,816 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl627,126,531 - 27,127,739 (-)EnsemblpanPan2panpan1.1
ZNF322
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13524,374,689 - 24,397,793 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3524,377,632 - 24,378,840 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3524,231,531 - 24,254,037 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03524,558,280 - 24,580,611 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3524,558,285 - 24,580,957 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13524,339,187 - 24,361,722 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03524,391,102 - 24,413,664 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03525,855,769 - 25,878,333 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Znf322
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049461,305,576 - 1,337,434 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366712,284,119 - 2,315,994 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF322
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl721,127,869 - 21,143,387 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1721,128,040 - 21,143,404 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2722,517,285 - 22,522,066 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF322
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11745,560,042 - 45,585,154 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1745,580,979 - 45,582,184 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604426,565,248 - 26,590,353 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf322
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624756248,724 - 265,583 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Znf322
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11442,351,774 - 42,367,591 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Zfp322a
414 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:195
Count of miRNA genes:128
Interacting mature miRNAs:152
Transcripts:ENSRNOT00000023268
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552966Pigfal18Plasma insulin-like growth factor 1 level QTL 188.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)171286094257860942Rat
2302377Scl61Serum cholesterol level QTL 614.36blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)17622199858177198Rat
1354654Spl7Serum phospholipid level QTL 75.5blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)173803135483031354Rat
70157Niddm32Non-insulin dependent diabetes mellitus QTL 324.34blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)172266079955604694Rat
9589151Insul30Insulin level QTL 308.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)171286094257860942Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174096801789341781Rat
1354628Stl13Serum triglyceride level QTL 133.8blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)172149899450592236Rat
1354629Scl31Serum cholesterol level QTL 314.1blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)173803135483031354Rat
1600398Edcs5Endometrial carcinoma susceptibility QTL 52.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)173544694975762341Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172385892668858926Rat
9590154Scort9Serum corticosterone level QTL 923.570.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)171286094257860942Rat
152025238Slep14Serum leptin concentration QTL 144.62blood leptin amount (VT:0005667)172439059584432719Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)173803135483031354Rat
1354635Bp245Blood pressure QTL 2456arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)173803135483031354Rat
1331765Hrtrt15Heart rate QTL 154.094heart pumping trait (VT:2000009)heart rate (CMO:0000002)171553702560531414Rat
7411666Foco31Food consumption QTL 3111.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)171286094257860942Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17473353449733534Rat
4889955Bss93Bone structure and strength QTL 934.4tibia size trait (VT:0100001)tibia cortical bone volume to tibia total bone volume ratio (CMO:0001727)172723344565155015Rat
1300129Rf25Renal function QTL 253.03blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)174106235286062352Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17143999106Rat
1354663Bvd5Brain ventricular dilatation QTL 53.510.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)173219953486201342Rat
152023740Bp406Blood pressure QTL 4066.06arterial blood pressure trait (VT:2000000)172413612784432719Rat
7488966Bp370Blood pressure QTL 3700.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172385892668858926Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17143999106Rat
152023737Bp405Blood pressure QTL 4055.06arterial blood pressure trait (VT:2000000)2413612784432719Rat
152023736Bp404Blood pressure QTL 4043.78arterial blood pressure trait (VT:2000000)172413612784432719Rat
724528Uae4Urinary albumin excretion QTL 44.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)173604553781045537Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17143999106Rat
70210Cm15Cardiac mass QTL 156.5heart right ventricle mass (VT:0007033)heart right ventricle wet weight (CMO:0000072)173006647275066472Rat
152023626Bp403Blood pressure QTL 4033.86arterial blood pressure trait (VT:2000000)172413612784432719Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)173310464578104645Rat
724549Niddm56Non-insulin dependent diabetes mellitus QTL 560.03blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)173219953449497050Rat
1581512Cm55Cardiac mass QTL 552.80.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172723344583975845Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17473353449733534Rat
61394Bp8Blood pressure QTL 82.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172328632264246472Rat
9589057Scfw6Subcutaneous fat weight QTL 68.620.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)171286094257860942Rat
2317045Aia11Adjuvant induced arthritis QTL 114.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)172652205171522051Rat
10450503Bp386Blood pressure QTL 3860.28arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172201970567019705Rat
9590088Insglur7Insulin/glucose ratio QTL 720.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)171286094257860942Rat
2313854Bp343Blood pressure QTL 3433.9life span trait (VT:0005372)age at time of death (CMO:0001193)173219953455604694Rat
2317053Aia25Adjuvant induced arthritis QTL 252.69joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)171060469455604694Rat
8552928Pigfal9Plasma insulin-like growth factor 1 level QTL 99blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)173310464578104645Rat
12903980Cm120Cardiac mass QTL 1200.002heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)172385892668858926Rat
4889891Eae32Experimental allergic encephalomyelitis QTL 324.80.0002nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)172723344572233445Rat
12903981Am17Aortic mass QTL 170.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)172385892668858926Rat
12903982Kidm70Kidney mass QTL 700.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)172385892668858926Rat
12903978Cm118Cardiac mass QTL 1180.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)172385892668858926Rat
1354619Bp242Blood pressure QTL 2426.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)173768787782687877Rat
12903979Cm119Cardiac mass QTL 1190.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172385892668858926Rat

Markers in Region
RH130258  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21741,773,159 - 41,773,347 (+)MAPPERmRatBN7.2
Rnor_6.01744,024,407 - 44,024,594NCBIRnor6.0
Rnor_5.01745,877,802 - 45,877,989UniSTSRnor5.0
RGSC_v3.41748,977,189 - 48,977,376UniSTSRGSC3.4
Celera1741,402,791 - 41,402,978UniSTS
Cytogenetic Map17q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 91 59 6 355 191 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000023268   ⟹   ENSRNOP00000060068
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1742,203,021 - 42,217,685 (+)Ensembl
mRatBN7.2 Ensembl1741,773,782 - 41,790,078 (+)Ensembl
Rnor_6.0 Ensembl1744,025,267 - 44,039,284 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097405   ⟹   ENSRNOP00000092506
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1742,201,083 - 42,279,388 (+)Ensembl
mRatBN7.2 Ensembl1741,773,782 - 41,790,078 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000098781   ⟹   ENSRNOP00000077432
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1741,781,687 - 41,786,597 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108275   ⟹   ENSRNOP00000097563
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1742,201,083 - 42,279,388 (+)Ensembl
mRatBN7.2 Ensembl1741,773,991 - 41,790,078 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000135935   ⟹   ENSRNOP00000111273
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1742,202,005 - 42,263,201 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000142591   ⟹   ENSRNOP00000111576
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1742,201,218 - 42,220,308 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000146695   ⟹   ENSRNOP00000110848
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1742,200,956 - 42,220,308 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000157343   ⟹   ENSRNOP00000100759
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1742,201,083 - 42,276,333 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000168360   ⟹   ENSRNOP00000107249
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1742,201,083 - 42,279,388 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000169148   ⟹   ENSRNOP00000100976
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1742,201,083 - 42,277,984 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000173593   ⟹   ENSRNOP00000105492
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1742,201,083 - 42,279,388 (+)Ensembl
RefSeq Acc Id: NM_001135084   ⟹   NP_001128556
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81742,202,043 - 42,216,060 (+)NCBI
mRatBN7.21741,774,020 - 41,788,038 (+)NCBI
Rnor_6.01744,025,267 - 44,039,284 (+)NCBI
Rnor_5.01745,878,427 - 45,894,295 (+)NCBI
RGSC_v3.41748,978,049 - 48,992,066 (+)RGD
Celera1741,403,651 - 41,417,666 (+)RGD
Sequence:
RefSeq Acc Id: XM_006253974   ⟹   XP_006254036
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81742,202,135 - 42,215,713 (+)NCBI
mRatBN7.21741,773,789 - 41,789,654 (+)NCBI
Rnor_6.01744,025,036 - 44,040,900 (+)NCBI
Rnor_5.01745,878,427 - 45,894,295 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063276731   ⟹   XP_063132801
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81742,202,139 - 42,215,713 (+)NCBI
RefSeq Acc Id: XM_063276732   ⟹   XP_063132802
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81742,201,989 - 42,215,713 (+)NCBI
RefSeq Acc Id: XM_063276733   ⟹   XP_063132803
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81742,202,255 - 42,215,713 (+)NCBI
RefSeq Acc Id: NP_001128556   ⟸   NM_001135084
- UniProtKB: D3ZJ04 (UniProtKB/TrEMBL),   A6KLQ9 (UniProtKB/TrEMBL),   A0A8I5Y159 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006254036   ⟸   XM_006253974
- Peptide Label: isoform X1
- UniProtKB: D3ZJ04 (UniProtKB/TrEMBL),   A6KLQ9 (UniProtKB/TrEMBL),   A0A8I5Y159 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000060068   ⟸   ENSRNOT00000023268
Ensembl Acc Id: ENSRNOP00000092506   ⟸   ENSRNOT00000097405
Ensembl Acc Id: ENSRNOP00000077432   ⟸   ENSRNOT00000098781
Ensembl Acc Id: ENSRNOP00000097563   ⟸   ENSRNOT00000108275
RefSeq Acc Id: XP_063132802   ⟸   XM_063276732
- Peptide Label: isoform X1
- UniProtKB: A6KLQ9 (UniProtKB/TrEMBL),   D3ZJ04 (UniProtKB/TrEMBL),   A0A8I5Y159 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132801   ⟸   XM_063276731
- Peptide Label: isoform X1
- UniProtKB: A6KLQ9 (UniProtKB/TrEMBL),   D3ZJ04 (UniProtKB/TrEMBL),   A0A8I5Y159 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132803   ⟸   XM_063276733
- Peptide Label: isoform X1
- UniProtKB: A6KLQ9 (UniProtKB/TrEMBL),   D3ZJ04 (UniProtKB/TrEMBL),   A0A8I5Y159 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000110848   ⟸   ENSRNOT00000146695
Ensembl Acc Id: ENSRNOP00000111576   ⟸   ENSRNOT00000142591
Ensembl Acc Id: ENSRNOP00000100976   ⟸   ENSRNOT00000169148
Ensembl Acc Id: ENSRNOP00000105492   ⟸   ENSRNOT00000173593
Ensembl Acc Id: ENSRNOP00000100759   ⟸   ENSRNOT00000157343
Ensembl Acc Id: ENSRNOP00000107249   ⟸   ENSRNOT00000168360
Ensembl Acc Id: ENSRNOP00000111273   ⟸   ENSRNOT00000135935
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZJ04-F1-model_v2 AlphaFold D3ZJ04 1-399 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700473
Promoter ID:EPDNEW_R10996
Type:multiple initiation site
Name:Zfp322a_1
Description:zinc finger protein 322a
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01744,025,229 - 44,025,289EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1594230 AgrOrtholog
BioCyc Gene G2FUF-9315 BioCyc
Ensembl Genes ENSRNOG00000017318 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000023268 ENTREZGENE
  ENSRNOT00000023268.7 UniProtKB/TrEMBL
  ENSRNOT00000097405.2 UniProtKB/TrEMBL
  ENSRNOT00000108275.2 UniProtKB/TrEMBL
  ENSRNOT00000135935 ENTREZGENE
  ENSRNOT00000135935.1 UniProtKB/TrEMBL
  ENSRNOT00000142591 ENTREZGENE
  ENSRNOT00000142591.1 UniProtKB/TrEMBL
  ENSRNOT00000146695 ENTREZGENE
  ENSRNOT00000146695.1 UniProtKB/TrEMBL
  ENSRNOT00000157343.1 UniProtKB/TrEMBL
  ENSRNOT00000168360.1 UniProtKB/TrEMBL
  ENSRNOT00000169148 ENTREZGENE
  ENSRNOT00000169148.1 UniProtKB/TrEMBL
  ENSRNOT00000173593.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Zinc_finger UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
KEGG Report rno:680201 UniProtKB/TrEMBL
NCBI Gene 680201 ENTREZGENE
PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  PR DOMAIN ZINC FINGER PROTEIN UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
PhenoGen Zfp322a PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000017318 RatGTEx
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A8I5Y159 ENTREZGENE
  A6KLQ9 ENTREZGENE, UniProtKB/TrEMBL
  D3ZJ04 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-05 Zfp322a  zinc finger protein 322a  LOC680201  similar to zinc finger protein 322a  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC680201  similar to zinc finger protein 322a      Symbol and Name status set to provisional 70820 PROVISIONAL