Gene: Btbd17 (BTB domain containing 17) Rattus norvegicus
Analyze
Symbol:
Btbd17
Name:
BTB domain containing 17
RGD ID:
1563331
Description:
Predicted to be located in extracellular region. Orthologous to human BTBD17 (BTB domain containing 17); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
BTB (POZ) domain containing 17; BTB/POZ domain-containing protein 17; LOC303660; RGD1563331; similar to CG1841-PA, isoform A
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
BTBD17 (BTB domain containing 17) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):
Btbd17 (BTB domain containing 17) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Btbd17 (BTB domain containing 17) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
BTBD17 (BTB domain containing 17) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
BTBD17 (BTB domain containing 17) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Btbd17 (BTB domain containing 17) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
BTBD17 (BTB domain containing 17) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
BTBD17 (BTB domain containing 17) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Btbd17 (BTB domain containing 17) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Rattus rattus (black rat):
Btbd17 (BTB domain containing 17) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Mus musculus (house mouse):
Btbd17 (BTB domain containing 17)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
BTBD17 (BTB domain containing 17)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
btbd17b (BTB (POZ) domain containing 17b)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
btbd17a (BTB (POZ) domain containing 17a)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
Tango10
Alliance
DIOPT (Ensembl Compara|InParanoid|OrthoFinder|OrthoInspector|PANTHER)
Drosophila melanogaster (fruit fly):
Tango10
Alliance
DIOPT (InParanoid|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
W07A12.4
Alliance
DIOPT (OrthoFinder|OrthoInspector)
Xenopus tropicalis (tropical clawed frog):
btbd17
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
btbd17
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 100,325,177 - 100,331,669 (-) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 10 100,325,177 - 100,331,771 (-) Ensembl GRCr8 mRatBN7.2 10 99,826,132 - 99,832,624 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 99,826,132 - 99,832,624 (-) Ensembl mRatBN7.2 UTH_Rnor_SHR_Utx 10 104,884,580 - 104,891,092 (-) NCBI UTH_Rnor_SHR_Utx UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 104,347,701 - 104,354,213 (-) NCBI UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 99,747,201 - 99,753,689 (-) NCBI UTH_Rnor_WKY_Bbb_1.0 UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 103,334,052 - 103,341,820 (-) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 103,334,052 - 103,340,922 (-) Ensembl rn6 Rnor6.0 Rnor_5.0 10 102,991,771 - 102,999,504 (-) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 10 104,674,002 - 104,680,503 (-) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera 10 98,416,268 - 98,422,760 (-) NCBI Celera Cytogenetic Map 10 q32.1 NCBI
JBrowse:
Only show annotations with direct experimental evidence (0 objects hidden)
Btbd17 Rat 1,2-dichloroethane increases expression ISO Btbd17 (Mus musculus) 6480464 ethylene dichloride results in increased expression of BTBD17 mRNA CTD PMID:28960355 Btbd17 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of BTBD17 mRNA CTD PMID:32109520|PMID:33387578 Btbd17 Rat 2-palmitoylglycerol increases expression ISO BTBD17 (Homo sapiens) 6480464 2-palmitoylglycerol results in increased expression of BTBD17 mRNA CTD PMID:37199045 Btbd17 Rat 4,4'-sulfonyldiphenol increases expression ISO Btbd17 (Mus musculus) 6480464 bisphenol S results in increased expression of BTBD17 mRNA CTD PMID:30951980 Btbd17 Rat 4,4'-sulfonyldiphenol decreases methylation ISO Btbd17 (Mus musculus) 6480464 bisphenol S results in decreased methylation of BTBD17 exon CTD PMID:33297965 Btbd17 Rat 6-propyl-2-thiouracil decreases expression EXP 6480464 Propylthiouracil results in decreased expression of BTBD17 mRNA CTD PMID:24780913 Btbd17 Rat acrylamide decreases expression ISO BTBD17 (Homo sapiens) 6480464 Acrylamide results in decreased expression of BTBD17 mRNA CTD PMID:32763439 Btbd17 Rat aldehydo-D-glucose multiple interactions ISO Btbd17 (Mus musculus) 6480464 [lard co-treated with Cholesterol, Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose] more ... CTD PMID:37567420 Btbd17 Rat amitrole decreases expression EXP 6480464 Amitrole results in decreased expression of BTBD17 mRNA CTD PMID:38685447 Btbd17 Rat benzo[a]pyrene decreases expression EXP 6480464 Benzo(a)pyrene results in decreased expression of BTBD17 mRNA CTD PMID:21839799 Btbd17 Rat benzo[a]pyrene affects methylation ISO BTBD17 (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of BTBD17 promoter CTD PMID:27901495 Btbd17 Rat benzo[a]pyrene decreases expression ISO Btbd17 (Mus musculus) 6480464 Benzo(a)pyrene results in decreased expression of BTBD17 mRNA CTD PMID:27195522 Btbd17 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of BTBD17 mRNA CTD PMID:25181051 Btbd17 Rat bisphenol A decreases expression ISO Btbd17 (Mus musculus) 6480464 bisphenol A results in decreased expression of BTBD17 mRNA CTD PMID:35598803 Btbd17 Rat bisphenol A increases methylation ISO Btbd17 (Mus musculus) 6480464 bisphenol A results in increased methylation of BTBD17 promoter CTD PMID:27312807 Btbd17 Rat bisphenol F increases expression ISO Btbd17 (Mus musculus) 6480464 bisphenol F results in increased expression of BTBD17 mRNA CTD PMID:30951980 Btbd17 Rat butanal increases expression ISO BTBD17 (Homo sapiens) 6480464 butyraldehyde results in increased expression of BTBD17 mRNA CTD PMID:26079696 Btbd17 Rat cadmium atom multiple interactions ISO BTBD17 (Homo sapiens) 6480464 [Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of BTBD17 more ... CTD PMID:31738976 Btbd17 Rat cadmium dichloride multiple interactions ISO BTBD17 (Homo sapiens) 6480464 [Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of BTBD17 more ... CTD PMID:31738976 Btbd17 Rat carbon nanotube increases expression ISO Btbd17 (Mus musculus) 6480464 Nanotubes, Carbon analog results in increased expression of BTBD17 mRNA; Nanotubes, Carbon results in increased more ... CTD PMID:25554681 Btbd17 Rat copper atom multiple interactions EXP 6480464 [Copper co-treated with Dietary Sucrose] results in increased expression of BTBD17 mRNA CTD PMID:26033743 Btbd17 Rat copper atom increases expression EXP 6480464 Copper deficiency results in increased expression of BTBD17 mRNA CTD PMID:26033743 Btbd17 Rat copper(0) multiple interactions EXP 6480464 [Copper co-treated with Dietary Sucrose] results in increased expression of BTBD17 mRNA CTD PMID:26033743 Btbd17 Rat copper(0) increases expression EXP 6480464 Copper deficiency results in increased expression of BTBD17 mRNA CTD PMID:26033743 Btbd17 Rat crocidolite asbestos increases expression ISO Btbd17 (Mus musculus) 6480464 Asbestos, Crocidolite results in increased expression of BTBD17 mRNA CTD PMID:19446018 Btbd17 Rat Cuprizon decreases expression EXP 6480464 Cuprizone results in decreased expression of BTBD17 mRNA CTD PMID:26577399|PMID:27523638 Btbd17 Rat D-glucose multiple interactions ISO Btbd17 (Mus musculus) 6480464 [lard co-treated with Cholesterol, Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose] more ... CTD PMID:37567420 Btbd17 Rat dorsomorphin multiple interactions ISO BTBD17 (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ... CTD PMID:27188386 Btbd17 Rat ethanol increases expression ISO Btbd17 (Mus musculus) 6480464 Ethanol results in increased expression of BTBD17 mRNA CTD PMID:30319688 Btbd17 Rat fructose multiple interactions ISO Btbd17 (Mus musculus) 6480464 [lard co-treated with Cholesterol, Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose] more ... CTD PMID:37567420 Btbd17 Rat genistein decreases expression ISO Btbd17 (Mus musculus) 6480464 Genistein results in decreased expression of BTBD17 mRNA CTD PMID:32186404 Btbd17 Rat gentamycin decreases expression EXP 6480464 Gentamicins results in decreased expression of BTBD17 mRNA CTD PMID:33387578 Btbd17 Rat glucose multiple interactions ISO Btbd17 (Mus musculus) 6480464 [lard co-treated with Cholesterol, Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose] more ... CTD PMID:37567420 Btbd17 Rat pentanal increases expression ISO BTBD17 (Homo sapiens) 6480464 pentanal results in increased expression of BTBD17 mRNA CTD PMID:26079696 Btbd17 Rat potassium dichromate increases expression ISO Btbd17 (Mus musculus) 6480464 Potassium Dichromate results in increased expression of BTBD17 mRNA CTD PMID:23608068 Btbd17 Rat propanal increases expression ISO BTBD17 (Homo sapiens) 6480464 propionaldehyde results in increased expression of BTBD17 mRNA CTD PMID:26079696 Btbd17 Rat SB 431542 multiple interactions ISO BTBD17 (Homo sapiens) 6480464 [LDN 193189 co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide co-treated with FGF2 protein] results in increased expression of BTBD17 more ... CTD PMID:27188386|PMID:37664457 Btbd17 Rat sodium arsenate increases expression ISO Btbd17 (Mus musculus) 6480464 sodium arsenate results in increased expression of BTBD17 mRNA CTD PMID:39847705 Btbd17 Rat titanium dioxide decreases expression ISO Btbd17 (Mus musculus) 6480464 titanium dioxide results in decreased expression of BTBD17 mRNA CTD PMID:29264374 Btbd17 Rat titanium dioxide increases methylation ISO Btbd17 (Mus musculus) 6480464 titanium dioxide results in increased methylation of BTBD17 gene CTD PMID:35295148 Btbd17 Rat titanium dioxide decreases methylation ISO Btbd17 (Mus musculus) 6480464 titanium dioxide results in decreased methylation of BTBD17 gene CTD PMID:35295148 Btbd17 Rat trichloroethene increases expression EXP 6480464 Trichloroethylene results in increased expression of BTBD17 mRNA CTD PMID:33387578 Btbd17 Rat trichostatin A decreases expression ISO BTBD17 (Homo sapiens) 6480464 trichostatin A results in decreased expression of BTBD17 mRNA CTD PMID:24935251 Btbd17 Rat triptonide increases expression ISO Btbd17 (Mus musculus) 6480464 triptonide results in increased expression of BTBD17 mRNA CTD PMID:33045310 Btbd17 Rat valproic acid affects expression ISO Btbd17 (Mus musculus) 6480464 Valproic Acid affects the expression of BTBD17 mRNA CTD PMID:17963808 Btbd17 Rat valproic acid increases methylation ISO BTBD17 (Homo sapiens) 6480464 Valproic Acid results in increased methylation of BTBD17 gene CTD PMID:29154799 Btbd17 Rat valproic acid decreases expression ISO BTBD17 (Homo sapiens) 6480464 Valproic Acid results in decreased expression of BTBD17 mRNA CTD PMID:23179753|PMID:26272509|PMID:28001369 Btbd17 Rat valproic acid multiple interactions ISO BTBD17 (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ... CTD PMID:27188386
References
Genomics
Comparative Map Data
Btbd17 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 100,325,177 - 100,331,669 (-) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 10 100,325,177 - 100,331,771 (-) Ensembl GRCr8 mRatBN7.2 10 99,826,132 - 99,832,624 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 99,826,132 - 99,832,624 (-) Ensembl mRatBN7.2 UTH_Rnor_SHR_Utx 10 104,884,580 - 104,891,092 (-) NCBI UTH_Rnor_SHR_Utx UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 104,347,701 - 104,354,213 (-) NCBI UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 99,747,201 - 99,753,689 (-) NCBI UTH_Rnor_WKY_Bbb_1.0 UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 103,334,052 - 103,341,820 (-) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 103,334,052 - 103,340,922 (-) Ensembl rn6 Rnor6.0 Rnor_5.0 10 102,991,771 - 102,999,504 (-) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 10 104,674,002 - 104,680,503 (-) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera 10 98,416,268 - 98,422,760 (-) NCBI Celera Cytogenetic Map 10 q32.1 NCBI
BTBD17 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 17 74,356,416 - 74,363,327 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 74,356,416 - 74,361,868 (-) Ensembl hg38 GRCh38 GRCh37 17 72,352,555 - 72,358,007 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 17 69,864,150 - 69,869,553 (-) NCBI Build 36 Build 36 hg18 NCBI36 Celera 17 68,945,277 - 68,950,680 (-) NCBI Celera Cytogenetic Map 17 q25.1 NCBI HuRef 17 67,762,254 - 67,767,273 (-) NCBI HuRef CHM1_1 17 72,417,197 - 72,422,598 (-) NCBI CHM1_1 T2T-CHM13v2.0 17 75,247,050 - 75,253,964 (-) NCBI T2T-CHM13v2.0
Btbd17 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 114,681,495 - 114,692,738 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 114,682,043 - 114,686,771 (-) Ensembl GRCm39 Ensembl GRCm39 GRCm38 11 114,790,669 - 114,801,916 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 114,791,217 - 114,795,945 (-) Ensembl mm10 GRCm38 MGSCv37 11 114,651,983 - 114,657,206 (-) NCBI MGSCv37 MGSCv37 mm9 NCBIm37 MGSCv36 11 114,606,759 - 114,611,982 (-) NCBI MGSCv36 mm8 Celera 11 126,551,653 - 126,556,876 (-) NCBI Celera Cytogenetic Map 11 E2 NCBI cM Map 11 80.54 NCBI
Btbd17 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955553 1,247,702 - 1,252,581 (-) Ensembl ChiLan1.0 NW_004955553 1,247,702 - 1,271,777 (-) NCBI ChiLan1.0 ChiLan1.0
BTBD17 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 19 90,386,874 - 90,402,269 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 17 95,209,808 - 95,225,216 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 17 68,295,368 - 68,302,595 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 17 73,853,405 - 73,858,760 (-) NCBI PanPan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 17 73,853,645 - 73,858,684 (-) Ensembl panPan2 panpan1.1
BTBD17 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 9 6,046,811 - 6,052,843 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 9 6,047,911 - 6,052,088 (+) Ensembl canFam3 CanFam3.1 Dog10K_Boxer_Tasha 9 6,668,812 - 6,674,822 (+) NCBI Dog10K_Boxer_Tasha Dog10K_Boxer_Tasha ROS_Cfam_1.0 9 6,719,394 - 6,725,404 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 9 6,720,247 - 6,724,688 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 9 6,759,917 - 6,765,926 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 9 6,863,516 - 6,869,577 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 9 6,923,390 - 6,929,270 (+) NCBI UU_Cfam_GSD_1.0 UU_Cfam_GSD_1.0
Btbd17
BTBD17 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 12 6,770,172 - 6,775,152 (+) Ensembl susScr11 Sscrofa11.1 Sscrofa11.1 12 6,770,105 - 6,775,595 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 12 6,735,809 - 6,741,912 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
BTBD17 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 16 47,262,362 - 47,277,915 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 16 47,272,495 - 47,277,672 (+) Ensembl ChlSab1.1 Ensembl chlSab2 Vervet-AGM Vero_WHO_p1.0 NW_023666077 18,075,667 - 18,091,150 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Btbd17
Btbd17
miRNA Target Status (No longer updated)
Predicted Target Of
Count of predictions: 357 Count of miRNA genes: 188 Interacting mature miRNAs: 232 Transcripts: ENSRNOT00000004191 Prediction methods: Microtar, Miranda, Targetscan Result types: miRGate_prediction 
