Plekhg4 (pleckstrin homology and RhoGEF domain containing G4) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Pathways
Gene: Plekhg4 (pleckstrin homology and RhoGEF domain containing G4) Rattus norvegicus
Analyze
Symbol: Plekhg4
Name: pleckstrin homology and RhoGEF domain containing G4
RGD ID: 1310790
Description: Predicted to enable guanyl-nucleotide exchange factor activity. Orthologous to human PLEKHG4 (pleckstrin homology and RhoGEF domain containing G4); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; INTERACTS WITH alpha-Zearalanol; atrazine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC307796; pleckstrin homology domain containing, family G (with RhoGef domain) member 4; puratrophin-1; RGD1310790; similar to FLJ00068 protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81950,161,722 - 50,176,491 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1950,159,754 - 50,182,133 (+)EnsemblGRCr8
mRatBN7.21933,251,788 - 33,266,490 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1933,249,706 - 33,266,357 (+)EnsemblmRatBN7.2
Rnor_6.01937,327,395 - 37,345,047 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1937,330,930 - 37,345,040 (+)Ensemblrn6Rnor6.0
Rnor_5.01948,195,669 - 48,210,367 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41935,190,188 - 35,197,607 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1932,677,414 - 32,695,066 (+)NCBICelera
RGSC_v3.11935,190,890 - 35,202,169 (+)NCBI
Cytogenetic Map19q12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Comprehensive gene review and curation RGD comprehensive gene curation
6. Rho GTPases in insulin-stimulated glucose uptake. Satoh T Small GTPases. 2014;5:e28102. doi: 10.4161/sgtp.28102. Epub 2014 Mar 10.
Additional References at PubMed
PMID:23572525   PMID:25025572  


Genomics

Comparative Map Data
Plekhg4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81950,161,722 - 50,176,491 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1950,159,754 - 50,182,133 (+)EnsemblGRCr8
mRatBN7.21933,251,788 - 33,266,490 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1933,249,706 - 33,266,357 (+)EnsemblmRatBN7.2
Rnor_6.01937,327,395 - 37,345,047 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1937,330,930 - 37,345,040 (+)Ensemblrn6Rnor6.0
Rnor_5.01948,195,669 - 48,210,367 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41935,190,188 - 35,197,607 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1932,677,414 - 32,695,066 (+)NCBICelera
RGSC_v3.11935,190,890 - 35,202,169 (+)NCBI
Cytogenetic Map19q12NCBI
PLEKHG4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381667,277,580 - 67,289,480 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1667,277,510 - 67,289,499 (+)Ensemblhg38GRCh38
GRCh371667,312,065 - 67,323,383 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361665,868,914 - 65,880,884 (+)NCBIBuild 36Build 36hg18NCBI36
Celera1651,819,638 - 51,831,669 (+)NCBICelera
Cytogenetic Map16q22.1NCBI
HuRef1653,184,495 - 53,196,466 (+)NCBIHuRef
CHM1_11668,718,769 - 68,730,759 (+)NCBICHM1_1
T2T-CHM13v2.01673,071,877 - 73,083,777 (+)NCBIT2T-CHM13v2.0
Plekhg4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398106,096,272 - 106,109,492 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8106,099,906 - 106,109,494 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm388105,369,640 - 105,382,860 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8105,373,274 - 105,382,862 (+)Ensemblmm10GRCm38
MGSCv378107,899,281 - 107,906,762 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv368108,264,510 - 108,271,991 (+)NCBIMGSCv36mm8
Celera8109,598,528 - 109,606,009 (+)NCBICelera
Cytogenetic Map8D3NCBI
cM Map853.04NCBI
Plekhg4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554849,344,830 - 9,356,182 (-)NCBIChiLan1.0ChiLan1.0
PLEKHG4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21876,804,149 - 76,818,746 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11682,720,546 - 82,731,397 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01647,623,234 - 47,634,704 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11667,013,034 - 67,023,917 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1667,013,926 - 67,023,917 (+)EnsemblpanPan2panpan1.1
PLEKHG4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1582,075,536 - 82,102,846 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl582,075,852 - 82,102,168 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha582,082,780 - 82,092,426 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0582,528,434 - 82,538,080 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl582,510,764 - 82,537,406 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1582,354,537 - 82,364,183 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0582,040,113 - 82,049,760 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0582,679,358 - 82,689,004 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Plekhg4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934941,829,897 - 41,856,261 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493647517,737,734 - 17,746,109 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLEKHG4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl627,923,617 - 27,933,153 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1627,921,598 - 27,932,680 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2625,188,898 - 25,226,383 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PLEKHG4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1560,157,217 - 60,177,105 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl560,163,553 - 60,174,765 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604722,910,275 - 22,930,175 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plekhg4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474619,037,195 - 19,046,741 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Plekhg4
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11725,099,139 - 25,108,082 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Plekhg4
47 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:115
Count of miRNA genes:91
Interacting mature miRNAs:97
Transcripts:ENSRNOT00000022439
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)191922068964220689Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19799775052997750Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)194622677874246245Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)193628974246245Rat
2313395Anxrr26Anxiety related response QTL 26aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)194438513474246245Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)193253961574246245Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)193128753251431640Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)193177788874246245Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19799775052997750Rat
1554318Bmd5Bone mineral density QTL 512.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)192318858668188586Rat
1549835Tcas7Tongue tumor susceptibility QTL 70.001tongue integrity trait (VT:0010553)squamous cell carcinoma of the head and neck tumor number (CMO:0001876)194172254674246245Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19219431774246245Rat
1354633Bw28Body weight QTL 286.04body mass (VT:0001259)body weight (CMO:0000012)194072709254856850Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19799775052997750Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032907674246245Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)19574806450748064Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)193236531174246245Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)192409397369093973Rat
2303628Vencon9Ventilatory control QTL 90.005respiration trait (VT:0001943)minute ventilation (CMO:0000132)192318858668188586Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191083361874246245Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19799775052997750Rat
1354607Gmadr1Adrenal mass QTL 15.83adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)194072709254856850Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)192010930665109306Rat
1354600Salc2Saline consumption QTL 29.910.001drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)194072709254856850Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19219431774246245Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
15 6 46 154 52 51 20 55 20 6 233 130 11 132 63 92 31 14 14

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001431313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006255483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008774228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017587963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017587964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017587965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017587966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017587967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017587968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017587969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063278642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063278643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063278644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063278645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000022439   ⟹   ENSRNOP00000022439
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1950,160,774 - 50,169,868 (+)Ensembl
mRatBN7.2 Ensembl1933,250,853 - 33,259,433 (+)Ensembl
Rnor_6.0 Ensembl1937,330,930 - 37,345,040 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099933   ⟹   ENSRNOP00000076499
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1950,161,773 - 50,182,133 (+)Ensembl
mRatBN7.2 Ensembl1933,252,417 - 33,259,433 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000104759   ⟹   ENSRNOP00000081851
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1950,159,754 - 50,169,868 (+)Ensembl
mRatBN7.2 Ensembl1933,249,706 - 33,266,357 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000111373   ⟹   ENSRNOP00000087289
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1950,162,139 - 50,176,517 (+)Ensembl
mRatBN7.2 Ensembl1933,250,285 - 33,259,433 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000123433   ⟹   ENSRNOP00000102904
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1950,162,139 - 50,169,868 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000161025   ⟹   ENSRNOP00000105691
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1950,159,939 - 50,169,868 (+)Ensembl
RefSeq Acc Id: XM_006255483   ⟹   XP_006255545
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81950,162,064 - 50,176,491 (+)NCBI
mRatBN7.21933,251,789 - 33,266,490 (+)NCBI
Rnor_6.01937,328,701 - 37,345,047 (+)NCBI
Rnor_5.01948,195,669 - 48,210,367 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039098211   ⟹   XP_038954139
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81950,162,064 - 50,176,491 (+)NCBI
mRatBN7.21933,251,788 - 33,266,490 (+)NCBI
RefSeq Acc Id: XM_039098212   ⟹   XP_038954140
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81950,162,064 - 50,169,866 (+)NCBI
mRatBN7.21933,251,789 - 33,259,945 (+)NCBI
RefSeq Acc Id: XM_039098213   ⟹   XP_038954141
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81950,161,820 - 50,176,491 (+)NCBI
mRatBN7.21933,251,788 - 33,266,490 (+)NCBI
RefSeq Acc Id: XM_063278642   ⟹   XP_063134712
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81950,161,722 - 50,176,491 (+)NCBI
RefSeq Acc Id: XM_063278643   ⟹   XP_063134713
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81950,162,064 - 50,169,866 (+)NCBI
RefSeq Acc Id: XM_063278644   ⟹   XP_063134714
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81950,161,722 - 50,176,491 (+)NCBI
RefSeq Acc Id: XM_063278645   ⟹   XP_063134715
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81950,161,722 - 50,169,866 (+)NCBI
RefSeq Acc Id: XP_006255545   ⟸   XM_006255483
- Peptide Label: isoform X3
- UniProtKB: A0A8I5Y027 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000022439   ⟸   ENSRNOT00000022439
RefSeq Acc Id: XP_038954139   ⟸   XM_039098211
- Peptide Label: isoform X1
- UniProtKB: A0A8I5Y027 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038954141   ⟸   XM_039098213
- Peptide Label: isoform X4
- UniProtKB: D3ZQ60 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038954140   ⟸   XM_039098212
- Peptide Label: isoform X2
- UniProtKB: A0A8I5Y027 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000087289   ⟸   ENSRNOT00000111373
Ensembl Acc Id: ENSRNOP00000076499   ⟸   ENSRNOT00000099933
Ensembl Acc Id: ENSRNOP00000081851   ⟸   ENSRNOT00000104759
RefSeq Acc Id: XP_063134712   ⟸   XM_063278642
- Peptide Label: isoform X4
- UniProtKB: D3ZQ60 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063134714   ⟸   XM_063278644
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063134715   ⟸   XM_063278645
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063134713   ⟸   XM_063278643
- Peptide Label: isoform X5
- UniProtKB: A0A8I6AG98 (UniProtKB/TrEMBL),   A0A8I5Y027 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000102904   ⟸   ENSRNOT00000123433
Ensembl Acc Id: ENSRNOP00000105691   ⟸   ENSRNOT00000161025
Protein Domains
DH   PH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZQ60-F1-model_v2 AlphaFold D3ZQ60 1-1163 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310790 AgrOrtholog
BioCyc Gene G2FUF-5833 BioCyc
Ensembl Genes ENSRNOG00000016479 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000022439 ENTREZGENE
  ENSRNOT00000022439.8 UniProtKB/TrEMBL
  ENSRNOT00000099933 ENTREZGENE
  ENSRNOT00000099933.2 UniProtKB/TrEMBL
  ENSRNOT00000104759.2 UniProtKB/TrEMBL
  ENSRNOT00000111373 ENTREZGENE
  ENSRNOT00000111373.2 UniProtKB/TrEMBL
  ENSRNOT00000123433 ENTREZGENE
  ENSRNOT00000123433.1 UniProtKB/TrEMBL
  ENSRNOT00000161025.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.900.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
InterPro DBL_dom_sf UniProtKB/TrEMBL
  DH-domain UniProtKB/TrEMBL
  PH_type UniProtKB/TrEMBL
  Pleckstrin_homology UniProtKB/TrEMBL
  Rho_GEF_signaling-related UniProtKB/TrEMBL
  SOS1_NGEF_PH UniProtKB/TrEMBL
NCBI Gene 307796 ENTREZGENE
PANTHER PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING, FAMILY G (WITH RHOGEF DOMAIN) MEMBER 4 UniProtKB/TrEMBL
  RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR-RELATED UniProtKB/TrEMBL
Pfam RhoGEF UniProtKB/TrEMBL
  SOS1_NGEF_PH UniProtKB/TrEMBL
PhenoGen Plekhg4 PhenoGen
PROSITE DH_2 UniProtKB/TrEMBL
  PH_DOMAIN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000016479 RatGTEx
SMART RhoGEF UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
Superfamily-SCOP DH-domain UniProtKB/TrEMBL
  PH domain-like UniProtKB/TrEMBL
UniProt A0A8I5Y027 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZTC9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AG98 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LL84_RAT UniProtKB/TrEMBL
  A0ABK0LME9_RAT UniProtKB/TrEMBL
  A6IYP6 ENTREZGENE, UniProtKB/TrEMBL
  D3ZQ60 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-30 Plekhg4  pleckstrin homology and RhoGEF domain containing G4  Plekhg4  pleckstrin homology domain containing, family G (with RhoGef domain) member 4  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Plekhg4  pleckstrin homology domain containing, family G (with RhoGef domain) member 4   Plekhg4_predicted  pleckstrin homology domain containing, family G (with RhoGef domain) member 4 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Plekhg4_predicted  pleckstrin homology domain containing, family G (with RhoGef domain) member 4 (predicted)  RGD1310790_predicted  similar to FLJ00068 protein (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1310790_predicted  similar to FLJ00068 protein (predicted)  LOC307796_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC307796_predicted  similar to FLJ00068 protein (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL