Bri3 (brain protein I3) - Rat Genome Database

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Gene: Bri3 (brain protein I3) Rattus norvegicus
Analyze
Symbol: Bri3
Name: brain protein I3
RGD ID: 1309187
Description: Predicted to enable identical protein binding activity. Predicted to be located in lysosomal membrane and perinuclear region of cytoplasm. Orthologous to human BRI3 (brain protein I3); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC304284; membrane protein BRI3; MGC105711
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81215,454,673 - 15,478,319 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1215,454,673 - 15,478,319 (-)EnsemblGRCr8
mRatBN7.21210,341,007 - 10,364,655 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1210,341,011 - 10,364,735 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1211,148,230 - 11,171,735 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01211,771,517 - 11,795,029 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01210,795,272 - 10,818,603 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01212,322,247 - 12,330,929 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,322,243 - 12,330,939 (-)Ensemblrn6Rnor6.0
Rnor_5.01214,374,635 - 14,383,317 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41210,670,023 - 10,678,698 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1212,141,016 - 12,149,572 (-)NCBICelera
RGSC_v3.11210,699,950 - 10,708,633 (-)NCBI
Cytogenetic Map12p11NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15606899   PMID:26617783  


Genomics

Comparative Map Data
Bri3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81215,454,673 - 15,478,319 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1215,454,673 - 15,478,319 (-)EnsemblGRCr8
mRatBN7.21210,341,007 - 10,364,655 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1210,341,011 - 10,364,735 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1211,148,230 - 11,171,735 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01211,771,517 - 11,795,029 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01210,795,272 - 10,818,603 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01212,322,247 - 12,330,929 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,322,243 - 12,330,939 (-)Ensemblrn6Rnor6.0
Rnor_5.01214,374,635 - 14,383,317 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41210,670,023 - 10,678,698 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1212,141,016 - 12,149,572 (-)NCBICelera
RGSC_v3.11210,699,950 - 10,708,633 (-)NCBI
Cytogenetic Map12p11NCBI
BRI3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38798,281,686 - 98,323,430 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl798,252,379 - 98,310,441 (+)Ensemblhg38GRCh38
GRCh37797,910,998 - 97,922,275 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36797,748,923 - 97,758,775 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34797,555,637 - 97,565,490NCBI
Celera792,604,881 - 92,616,177 (+)NCBICelera
Cytogenetic Map7q21.3NCBI
HuRef792,511,488 - 92,522,664 (+)NCBIHuRef
CHM1_1797,841,014 - 97,852,283 (+)NCBICHM1_1
T2T-CHM13v2.0799,512,427 - 99,562,122 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2797,235,846 - 97,247,141 (+)NCBI
Bri3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395144,181,247 - 144,383,567 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5144,181,247 - 144,383,567 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm385144,244,437 - 144,264,573 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5144,244,437 - 144,446,757 (+)Ensemblmm10GRCm38
MGSCv375145,005,306 - 145,025,442 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv365144,508,763 - 144,518,100 (+)NCBIMGSCv36mm8
Celera5141,229,097 - 141,249,588 (+)NCBICelera
Cytogenetic Map5G2NCBI
cM Map583.19NCBI
Bri3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546014,157,685 - 14,174,192 (+)Ensembl
ChiLan1.0NW_00495546014,165,874 - 14,174,464 (+)NCBIChiLan1.0ChiLan1.0
BRI3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26116,128,238 - 116,137,820 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17164,392,910 - 164,402,454 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v076,231,026 - 6,240,581 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17103,735,482 - 103,756,479 (+)NCBIPanPan1.1PanPan1.1panPan2
BRI3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1611,046,861 - 11,065,180 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl611,054,189 - 11,064,137 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha612,673,327 - 12,691,622 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0611,047,430 - 11,065,691 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl611,054,733 - 11,064,667 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1610,916,158 - 10,934,403 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0610,895,944 - 10,914,209 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0611,138,327 - 11,148,254 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Bri3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344139,116,195 - 139,130,531 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936750814,786 - 829,065 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936750814,786 - 829,066 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BRI3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl35,463,675 - 5,471,391 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.135,463,609 - 5,471,398 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.235,512,287 - 5,526,773 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BRI3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12814,877,849 - 14,904,057 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660701,189,681 - 1,199,847 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bri3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474031,849,909 - 31,858,430 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474031,797,055 - 31,886,488 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Bri3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1168,919,539 - 8,942,178 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Bri3
123 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:39
Count of miRNA genes:33
Interacting mature miRNAs:39
Transcripts:ENSRNOT00000001336
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12592191825247790Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121120049452308831Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)12129775522Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
1357337Gluco3Glucose level QTL 30.0004adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)12116966671Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12348941648489416Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12138687564Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049752308831Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)121526424852308831Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12133700600Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)121174352852308831Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)121186960016966542Rat
61334Gluco17Glucose level QTL 176.3adipocyte glucose uptake trait (VT:0004185)adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)12116966671Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)12138635130Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12128133365Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)121223300030490641Rat
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)12128606299Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)12133700556Rat
724526Uae3Urinary albumin excretion QTL 34.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)12115486827Rat
1331763Wbc2White blood cell count QTL 23.162leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)121120049452308831Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)12124849755Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)61120049452308831Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12141361854Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12274769447747694Rat
2303568Bw88Body weight QTL 883body mass (VT:0001259)body weight (CMO:0000012)12128606299Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12308718048087180Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)12563330650633306Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12790162533938215Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat

Markers in Region
D12Rat37  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81215,486,654 - 15,486,827 (+)Marker Load Pipeline
mRatBN7.21210,372,993 - 10,373,166 (+)MAPPERmRatBN7.2
Rnor_6.01212,355,318 - 12,355,490NCBIRnor6.0
Rnor_5.01214,407,326 - 14,407,498UniSTSRnor5.0
RGSC_v3.41210,701,028 - 10,701,201RGDRGSC3.4
RGSC_v3.41210,701,029 - 10,701,201UniSTSRGSC3.4
Celera1212,172,750 - 12,172,922UniSTS
RGSC_v3.11210,730,957 - 10,731,129RGD
RH 3.4 Map12138.2UniSTS
RH 3.4 Map12138.2RGD
RH 2.0 Map12105.5RGD
FHH x ACI Map120.0RGD
Cytogenetic Map12p11UniSTS
D12Got14  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81215,469,067 - 15,469,259 (+)Marker Load Pipeline
mRatBN7.21210,355,403 - 10,355,595 (+)MAPPERmRatBN7.2
Rnor_6.01212,336,634 - 12,336,825NCBIRnor6.0
Rnor_5.01214,389,278 - 14,389,469UniSTSRnor5.0
Celera1212,155,267 - 12,155,460UniSTS
RH 3.4 Map12128.6RGD
RH 3.4 Map12128.6UniSTS
RH 2.0 Map12108.0RGD
Cytogenetic Map12p11UniSTS
RH128891  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21210,359,352 - 10,359,550 (+)MAPPERmRatBN7.2
Rnor_6.01212,340,583 - 12,340,780NCBIRnor6.0
Rnor_5.01214,393,227 - 14,393,424UniSTSRnor5.0
RGSC_v3.41210,688,160 - 10,688,357UniSTSRGSC3.4
Celera1212,159,228 - 12,159,425UniSTS
RH 3.4 Map6237.1UniSTS
Cytogenetic Map12p11UniSTS
RH134396  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21210,358,026 - 10,358,239 (+)MAPPERmRatBN7.2
Rnor_6.01212,339,257 - 12,339,469NCBIRnor6.0
Rnor_5.01214,391,901 - 14,392,113UniSTSRnor5.0
RGSC_v3.41210,686,834 - 10,687,046UniSTSRGSC3.4
Celera1212,157,902 - 12,158,114UniSTS
RH 3.4 Map12141.4UniSTS
Cytogenetic Map12p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 161 91 90 59 92 59 6 356 192 11 140 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000001336   ⟹   ENSRNOP00000001336
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1215,454,673 - 15,463,365 (-)Ensembl
mRatBN7.2 Ensembl1210,341,011 - 10,349,693 (-)Ensembl
Rnor_6.0 Ensembl1212,322,247 - 12,330,929 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092249
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1212,330,471 - 12,330,939 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092432
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1212,322,248 - 12,330,929 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092487
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1215,454,673 - 15,478,319 (-)Ensembl
mRatBN7.2 Ensembl1210,341,011 - 10,364,735 (-)Ensembl
Rnor_6.0 Ensembl1212,322,243 - 12,330,457 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092576
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1212,322,343 - 12,330,929 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092687
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1212,325,629 - 12,326,154 (-)Ensembl
RefSeq Acc Id: NM_001009604   ⟹   NP_001009604
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,454,673 - 15,463,365 (-)NCBI
mRatBN7.21210,341,007 - 10,349,699 (-)NCBI
Rnor_6.01212,322,247 - 12,330,929 (-)NCBI
Rnor_5.01214,374,635 - 14,383,317 (-)NCBI
RGSC_v3.41210,670,023 - 10,678,698 (-)RGD
Celera1212,141,016 - 12,149,572 (-)RGD
Sequence:
RefSeq Acc Id: NM_001393811   ⟹   NP_001380740
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,454,673 - 15,478,319 (-)NCBI
mRatBN7.21210,341,007 - 10,364,655 (-)NCBI
RefSeq Acc Id: NP_001009604   ⟸   NM_001009604
- Peptide Label: isoform 1
- UniProtKB: Q5PPK1 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000001336   ⟸   ENSRNOT00000001336
RefSeq Acc Id: NP_001380740   ⟸   NM_001393811
- Peptide Label: isoform 2
- UniProtKB: A0A8I6AW69 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5PPK1-F1-model_v2 AlphaFold Q5PPK1 1-125 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698430
Promoter ID:EPDNEW_R8950
Type:initiation region
Name:Bri3_1
Description:brain protein I3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01212,330,940 - 12,331,000EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309187 AgrOrtholog
BioCyc Gene G2FUF-20036 BioCyc
Ensembl Genes ENSRNOG00000001009 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000001336 ENTREZGENE
  ENSRNOT00000001336.7 UniProtKB/Swiss-Prot
  ENSRNOT00000092487 ENTREZGENE
IMAGE_CLONE IMAGE:7311234 IMAGE-MGC_LOAD
InterPro Brain_I3 UniProtKB/Swiss-Prot
KEGG Report rno:304284 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105711 IMAGE-MGC_LOAD
NCBI Gene 304284 ENTREZGENE
PANTHER BRAIN PROTEIN I3 UniProtKB/Swiss-Prot
  PTHR13551 UniProtKB/Swiss-Prot
Pfam DUF2367 UniProtKB/Swiss-Prot
PhenoGen Bri3 PhenoGen
RatGTEx ENSRNOG00000001009 RatGTEx
UniProt A0A8I6AW69 ENTREZGENE, UniProtKB/TrEMBL
  A6K1H4_RAT UniProtKB/TrEMBL
  A6K1H8_RAT UniProtKB/TrEMBL
  BRI3_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Bri3  brain protein I3  Bri3_predicted  brain protein I3 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Bri3_predicted  brain protein I3 (predicted)      Symbol and Name status set to approved 70820 APPROVED