BRI3 (brain protein I3) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: BRI3 (brain protein I3) Homo sapiens
Analyze
Symbol: BRI3
Name: brain protein I3
RGD ID: 1319388
HGNC Page HGNC:1109
Description: Enables identical protein binding activity. Predicted to be located in azurophil granule membrane and plasma membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: I3; membrane protein BRI3; pRGR2; RP11-307C18.1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: BRI3P1   BRI3P2   BRI3P3  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38798,281,686 - 98,323,430 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl798,252,379 - 98,310,441 (+)EnsemblGRCh38hg38GRCh38
GRCh37797,910,998 - 97,922,275 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36797,748,923 - 97,758,775 (+)NCBINCBI36Build 36hg18NCBI36
Build 34797,555,637 - 97,565,490NCBI
Celera792,604,881 - 92,616,177 (+)NCBICelera
Cytogenetic Map7q21.3NCBI
HuRef792,511,488 - 92,522,664 (+)NCBIHuRef
CHM1_1797,841,014 - 97,852,283 (+)NCBICHM1_1
T2T-CHM13v2.0799,512,427 - 99,562,122 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2797,235,846 - 97,247,141 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8076819   PMID:9847074   PMID:11860200   PMID:12477932   PMID:14592447   PMID:15489334   PMID:15606899   PMID:16341674   PMID:16508092   PMID:17390049   PMID:18452648   PMID:19366692  
PMID:20538055   PMID:23251661   PMID:30983867   PMID:32160551   PMID:32296183   PMID:32393512  


Genomics

Comparative Map Data
BRI3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38798,281,686 - 98,323,430 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl798,252,379 - 98,310,441 (+)EnsemblGRCh38hg38GRCh38
GRCh37797,910,998 - 97,922,275 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36797,748,923 - 97,758,775 (+)NCBINCBI36Build 36hg18NCBI36
Build 34797,555,637 - 97,565,490NCBI
Celera792,604,881 - 92,616,177 (+)NCBICelera
Cytogenetic Map7q21.3NCBI
HuRef792,511,488 - 92,522,664 (+)NCBIHuRef
CHM1_1797,841,014 - 97,852,283 (+)NCBICHM1_1
T2T-CHM13v2.0799,512,427 - 99,562,122 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2797,235,846 - 97,247,141 (+)NCBI
Bri3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395144,181,247 - 144,383,567 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5144,181,247 - 144,383,567 (+)EnsemblGRCm39 Ensembl
GRCm385144,244,437 - 144,264,573 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5144,244,437 - 144,446,757 (+)EnsemblGRCm38mm10GRCm38
MGSCv375145,005,306 - 145,025,442 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365144,508,763 - 144,518,100 (+)NCBIMGSCv36mm8
Celera5141,229,097 - 141,249,588 (+)NCBICelera
Cytogenetic Map5G2NCBI
Bri3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81215,454,673 - 15,478,319 (-)NCBIGRCr8
mRatBN7.21210,341,007 - 10,364,655 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1210,341,011 - 10,364,735 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1211,148,230 - 11,171,735 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01211,771,517 - 11,795,029 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01210,795,272 - 10,818,603 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01212,322,247 - 12,330,929 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,322,243 - 12,330,939 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01214,374,635 - 14,383,317 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41210,670,023 - 10,678,698 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11210,699,950 - 10,708,633 (-)NCBI
Celera1212,141,016 - 12,149,572 (-)NCBICelera
Cytogenetic Map12p11NCBI
Bri3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546014,157,685 - 14,174,192 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546014,165,874 - 14,174,464 (+)NCBIChiLan1.0ChiLan1.0
BRI3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26116,128,238 - 116,137,820 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17164,392,910 - 164,402,454 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v076,231,026 - 6,240,581 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17103,735,482 - 103,756,479 (+)NCBIpanpan1.1PanPan1.1panPan2
BRI3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1611,046,861 - 11,065,180 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl611,054,189 - 11,064,137 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha612,673,327 - 12,691,622 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0611,047,430 - 11,065,691 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl611,054,733 - 11,064,667 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1610,916,158 - 10,934,403 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0610,895,944 - 10,914,209 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0611,138,327 - 11,148,254 (-)NCBIUU_Cfam_GSD_1.0
Bri3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344139,116,195 - 139,130,531 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936750814,786 - 829,065 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936750814,786 - 829,066 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BRI3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl35,463,675 - 5,471,391 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.135,463,609 - 5,471,398 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.235,512,287 - 5,526,773 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BRI3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12814,877,849 - 14,904,057 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660701,189,681 - 1,199,847 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bri3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474031,849,909 - 31,858,430 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474031,797,055 - 31,886,488 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in BRI3
44 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 7p22.3-q36.3(chr7:53985-159282531)x1 copy number loss See cases [RCV000052250] Chr7:53985..159282531 [GRCh38]
Chr7:53985..159075220 [GRCh37]
Chr7:149068..158767981 [NCBI36]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7q21.3-22.1(chr7:98288474-101259804)x3 copy number gain See cases [RCV000053573] Chr7:98288474..101259804 [GRCh38]
Chr7:97917786..100903085 [GRCh37]
Chr7:97755722..100689805 [NCBI36]
Chr7:7q21.3-22.1		 pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:54185-159282390)x1 copy number loss See cases [RCV000135401] Chr7:54185..159282390 [GRCh38]
Chr7:54185..159075079 [GRCh37]
Chr7:149268..158767840 [NCBI36]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7q21.3-36.3(chr7:97419852-158923762)x3 copy number gain See cases [RCV000136717] Chr7:97419852..158923762 [GRCh38]
Chr7:97049164..158716453 [GRCh37]
Chr7:96887100..158409214 [NCBI36]
Chr7:7q21.3-36.3		 pathogenic
NC_000007.14:g.98304289_98528307dup duplication Normal pregnancy [RCV000161490] Chr7:98304289..98528307 [GRCh38]
Chr7:97933601..98157619 [GRCh37]
Chr7:7q21.3-22.1		 not provided
TMEM106B-BRAF fusion deletion Pleomorphic xanthoastrocytoma [RCV000454357] Chr7:12258147..140494267 [GRCh37]
Chr7:7p21.3-q34		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43360-159119707)x1 copy number loss See cases [RCV000446044] Chr7:43360..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
NM_018842.5(BAIAP2L1):c.487-10_487-9insA insertion not specified [RCV000455616] Chr7:98315621..98315622 [GRCh38]
Chr7:97944933..97944934 [GRCh37]
Chr7:7q21.3		 benign
NM_018842.5(BAIAP2L1):c.487-14_487-13insATTA insertion not specified [RCV000456008] Chr7:98315625..98315626 [GRCh38]
Chr7:97944937..97944938 [GRCh37]
Chr7:7q21.3		 benign
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707) copy number gain See cases [RCV000510686] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707)x3 copy number gain See cases [RCV000511549] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
NM_015379.5(BRI3):c.26A>G (p.Glu9Gly) single nucleotide variant not specified [RCV004332812] Chr7:98281821 [GRCh38]
Chr7:97911133 [GRCh37]
Chr7:7q21.3		 uncertain significance
GRCh37/hg19 7q21.2-22.1(chr7:92445452-99686985)x1 copy number loss Split hand-foot malformation 1 [RCV000656540] Chr7:92445452..99686985 [GRCh37]
Chr7:7q21.2-22.1		 pathogenic
NM_015379.5(BRI3):c.13C>G (p.Pro5Ala) single nucleotide variant not specified [RCV004298807] Chr7:98281808 [GRCh38]
Chr7:97911120 [GRCh37]
Chr7:7q21.3		 uncertain significance
NC_000007.13:g.(20954043_21001537)_(114528369_114556605)inv inversion Childhood apraxia of speech [RCV000234948] Chr7:21001537..114528369 [GRCh37]
Chr7:7p15.3-q31.1		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:44935-159126310)x3 copy number gain not provided [RCV000746280] Chr7:44935..159126310 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:10704-159122532)x3 copy number gain not provided [RCV000746278] Chr7:10704..159122532 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7q21.3(chr7:97912218-97915635)x3 copy number gain not provided [RCV000746910] Chr7:97912218..97915635 [GRCh37]
Chr7:7q21.3		 benign
NM_015379.5(BRI3):c.180C>T (p.His60=) single nucleotide variant not provided [RCV000969218] Chr7:98282388 [GRCh38]
Chr7:97911700 [GRCh37]
Chr7:7q21.3		 benign
GRCh37/hg19 7p22.3-q36.3(chr7:10365-159119707)x3 copy number gain not provided [RCV000848126] Chr7:10365..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
NM_018842.5(BAIAP2L1):c.1282G>A (p.Glu428Lys) single nucleotide variant not specified [RCV004302309] Chr7:98304336 [GRCh38]
Chr7:97933648 [GRCh37]
Chr7:7q21.3		 uncertain significance
GRCh37/hg19 7q21.12-22.1(chr7:87477185-100333327) copy number gain Isolated Pierre-Robin syndrome [RCV001352649] Chr7:87477185..100333327 [GRCh37]
Chr7:7q21.12-22.1		 pathogenic
NC_000007.13:g.(?_97816327)_(99382096_?)dup duplication not provided [RCV001916368] Chr7:97816327..99382096 [GRCh37]
Chr7:7q21.3-22.1		 uncertain significance
NM_018842.5(BAIAP2L1):c.1157C>G (p.Ser386Cys) single nucleotide variant not specified [RCV004301687] Chr7:98307695 [GRCh38]
Chr7:97937007 [GRCh37]
Chr7:7q21.3		 uncertain significance
GRCh37/hg19 7p22.3-q36.3(chr7:56604613-96692931)x1 copy number loss See cases [RCV002287832] Chr7:56604613..96692931 [GRCh37]
Chr7:7p22.3-q36.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.490G>A (p.Val164Met) single nucleotide variant not specified [RCV004293389] Chr7:98315609 [GRCh38]
Chr7:97944921 [GRCh37]
Chr7:7q21.3		 uncertain significance
GRCh37/hg19 7q21.2-22.1(chr7:92721627-98311537)x1 copy number loss not provided [RCV002474498] Chr7:92721627..98311537 [GRCh37]
Chr7:7q21.2-22.1		 pathogenic
NM_018842.5(BAIAP2L1):c.1348G>A (p.Asp450Asn) single nucleotide variant not specified [RCV004218669] Chr7:98304270 [GRCh38]
Chr7:97933582 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.986C>T (p.Ser329Leu) single nucleotide variant not specified [RCV004145475] Chr7:98307866 [GRCh38]
Chr7:97937178 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.1226C>A (p.Thr409Asn) single nucleotide variant not specified [RCV004118465] Chr7:98306454 [GRCh38]
Chr7:97935766 [GRCh37]
Chr7:7q21.3		 uncertain significance
GRCh37/hg19 7q21.3-22.1(chr7:97786282-98313434)x3 copy number gain not provided [RCV002475711] Chr7:97786282..98313434 [GRCh37]
Chr7:7q21.3-22.1		 uncertain significance
NM_018842.5(BAIAP2L1):c.1307C>A (p.Pro436Gln) single nucleotide variant not specified [RCV004102274] Chr7:98304311 [GRCh38]
Chr7:97933623 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.730G>A (p.Glu244Lys) single nucleotide variant not specified [RCV004112010] Chr7:98312174 [GRCh38]
Chr7:97941486 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.1350C>A (p.Asp450Glu) single nucleotide variant not specified [RCV004230450] Chr7:98304268 [GRCh38]
Chr7:97933580 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.1152C>A (p.Asp384Glu) single nucleotide variant not specified [RCV004089215] Chr7:98307700 [GRCh38]
Chr7:97937012 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.1373C>T (p.Thr458Met) single nucleotide variant not specified [RCV004072330] Chr7:98304245 [GRCh38]
Chr7:97933557 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.743C>A (p.Thr248Asn) single nucleotide variant not specified [RCV004109470] Chr7:98312161 [GRCh38]
Chr7:97941473 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.1190C>T (p.Thr397Met) single nucleotide variant not specified [RCV004091584] Chr7:98306490 [GRCh38]
Chr7:97935802 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.509G>A (p.Arg170His) single nucleotide variant not specified [RCV004195374] Chr7:98315590 [GRCh38]
Chr7:97944902 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.998C>T (p.Ala333Val) single nucleotide variant not specified [RCV004147980] Chr7:98307854 [GRCh38]
Chr7:97937166 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.623A>G (p.His208Arg) single nucleotide variant not specified [RCV004082630] Chr7:98315476 [GRCh38]
Chr7:97944788 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_015379.5(BRI3):c.154C>G (p.His52Asp) single nucleotide variant not specified [RCV004133721] Chr7:98282362 [GRCh38]
Chr7:97911674 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.515G>C (p.Ser172Thr) single nucleotide variant not specified [RCV004290365] Chr7:98315584 [GRCh38]
Chr7:97944896 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.581G>C (p.Cys194Ser) single nucleotide variant not specified [RCV004272424] Chr7:98315518 [GRCh38]
Chr7:97944830 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_015379.5(BRI3):c.296T>C (p.Ile99Thr) single nucleotide variant not specified [RCV004276731] Chr7:98291161 [GRCh38]
Chr7:97920473 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.1068G>T (p.Lys356Asn) single nucleotide variant not specified [RCV004256326] Chr7:98307784 [GRCh38]
Chr7:97937096 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_015379.5(BRI3):c.147A>G (p.Ile49Met) single nucleotide variant not specified [RCV004352906] Chr7:98282355 [GRCh38]
Chr7:97911667 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.227T>G (p.Ile76Arg) single nucleotide variant not specified [RCV004339211] Chr7:98320286 [GRCh38]
Chr7:97949598 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.1347C>T (p.Ala449=) single nucleotide variant not provided [RCV003433949] Chr7:98304271 [GRCh38]
Chr7:97933583 [GRCh37]
Chr7:7q21.3		 likely benign
NM_018842.5(BAIAP2L1):c.487-6_487-3del deletion not provided [RCV003662991] Chr7:98315615..98315618 [GRCh38]
Chr7:97944927..97944930 [GRCh37]
Chr7:7q21.3		 benign
NM_018842.5(BAIAP2L1):c.1442C>T (p.Ala481Val) single nucleotide variant not provided [RCV003490509] Chr7:98294092 [GRCh38]
Chr7:97923404 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.487-14_487-13insATTATTATTA insertion not provided [RCV003662992] Chr7:98315625..98315626 [GRCh38]
Chr7:97944937..97944938 [GRCh37]
Chr7:7q21.3		 likely benign
NM_018842.5(BAIAP2L1):c.1150G>A (p.Asp384Asn) single nucleotide variant not specified [RCV004423777] Chr7:98307702 [GRCh38]
Chr7:97937014 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.1270G>A (p.Val424Met) single nucleotide variant not specified [RCV004423778] Chr7:98304348 [GRCh38]
Chr7:97933660 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.452G>A (p.Arg151Gln) single nucleotide variant not specified [RCV004423780] Chr7:98317253 [GRCh38]
Chr7:97946565 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.1364C>T (p.Ser455Leu) single nucleotide variant not specified [RCV004423779] Chr7:98304254 [GRCh38]
Chr7:97933566 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.714A>C (p.Lys238Asn) single nucleotide variant not specified [RCV004423781] Chr7:98312190 [GRCh38]
Chr7:97941502 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_015379.5(BRI3):c.154C>T (p.His52Tyr) single nucleotide variant not specified [RCV004434376] Chr7:98282362 [GRCh38]
Chr7:97911674 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_015379.5(BRI3):c.316T>C (p.Phe106Leu) single nucleotide variant not specified [RCV004434377] Chr7:98291181 [GRCh38]
Chr7:97920493 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.671G>A (p.Arg224Gln) single nucleotide variant not specified [RCV004253745] Chr7:98312233 [GRCh38]
Chr7:97941545 [GRCh37]
Chr7:7q21.3		 uncertain significance
NM_018842.5(BAIAP2L1):c.856C>T (p.Pro286Ser) single nucleotide variant not specified [RCV004162363] Chr7:98310544 [GRCh38]
Chr7:97939856 [GRCh37]
Chr7:7q21.3		 uncertain significance
Single allele complex Ring chromosome 7 [RCV002280646] Chr7:43360..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
NM_018842.5(BAIAP2L1):c.755C>T (p.Thr252Ile) single nucleotide variant not specified [RCV004136406] Chr7:98312149 [GRCh38]
Chr7:97941461 [GRCh37]
Chr7:7q21.3		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1252
Count of miRNA genes:692
Interacting mature miRNAs:790
Transcripts:ENST00000297290, ENST00000456357, ENST00000473967, ENST00000474291, ENST00000485422, ENST00000491463, ENST00000539286
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH79669  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37797,921,008 - 97,921,157UniSTSGRCh37
Build 36797,758,944 - 97,759,093RGDNCBI36
Celera792,614,910 - 92,615,059RGD
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map7q21.3UniSTS
HuRef792,521,397 - 92,521,546UniSTS
CRA_TCAGchr7v2797,245,874 - 97,246,023UniSTS
GeneMap99-GB4 RH Map7510.61UniSTS
SGC31939  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371100,679,374 - 100,679,479UniSTSGRCh37
GRCh37797,920,702 - 97,920,807UniSTSGRCh37
Build 361100,451,962 - 100,452,067RGDNCBI36
Celera198,936,218 - 98,936,323RGD
Celera792,614,604 - 92,614,709UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map7q22.1UniSTS
HuRef792,521,091 - 92,521,196UniSTS
HuRef198,802,047 - 98,802,152UniSTS
CRA_TCAGchr7v2797,245,568 - 97,245,673UniSTS
Whitehead-RH Map7470.6UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 2
Medium 2430 2910 1715 619 1850 461 4354 2130 3266 413 1445 1604 171 1204 2787 4
Low 9 81 11 5 101 4 3 67 468 6 13 9 4 1 1 2 2
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001159491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_015379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017011931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017011932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017011933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017011934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017011935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017011936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054357759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054357760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054357761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054357762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054357763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054357764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007059996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007059997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007059998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007059999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007060000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB055977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC004841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC091654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC093169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC093799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF041430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF106966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF108440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF432881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ018487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ083249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB054862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB528682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH236956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000297290   ⟹   ENSP00000297290
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl798,281,686 - 98,291,545 (+)Ensembl
RefSeq Acc Id: ENST00000456357
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl798,252,379 - 98,291,524 (+)Ensembl
RefSeq Acc Id: ENST00000473967
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl798,281,836 - 98,291,545 (+)Ensembl
RefSeq Acc Id: ENST00000474291
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl798,281,822 - 98,282,706 (+)Ensembl
RefSeq Acc Id: ENST00000485422
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl798,306,522 - 98,310,441 (+)Ensembl
RefSeq Acc Id: ENST00000491463   ⟹   ENSP00000459133
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl798,282,383 - 98,307,449 (+)Ensembl
RefSeq Acc Id: ENST00000539286   ⟹   ENSP00000440936
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl798,281,667 - 98,292,963 (+)Ensembl
RefSeq Acc Id: NM_001159491   ⟹   NP_001152963
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,292,963 (+)NCBI
GRCh37797,910,972 - 97,952,972 (+)NCBI
Celera792,604,881 - 92,616,177 (+)RGD
HuRef792,511,488 - 92,522,664 (+)ENTREZGENE
CHM1_1797,841,014 - 97,852,283 (+)NCBI
T2T-CHM13v2.0799,512,427 - 99,523,710 (+)NCBI
CRA_TCAGchr7v2797,235,846 - 97,247,141 (+)ENTREZGENE
Sequence:
RefSeq Acc Id: NM_015379   ⟹   NP_056194
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,291,545 (+)NCBI
GRCh37797,910,972 - 97,952,972 (+)NCBI
Build 36797,748,923 - 97,758,775 (+)NCBI Archive
Celera792,604,881 - 92,616,177 (+)RGD
HuRef792,511,488 - 92,522,664 (+)ENTREZGENE
CHM1_1797,841,014 - 97,850,847 (+)NCBI
T2T-CHM13v2.0799,512,427 - 99,522,292 (+)NCBI
CRA_TCAGchr7v2797,235,846 - 97,247,141 (+)ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017011931   ⟹   XP_016867420
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,323,430 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017011932   ⟹   XP_016867421
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,310,443 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017011933   ⟹   XP_016867422
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,323,430 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017011934   ⟹   XP_016867423
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,309,220 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017011936   ⟹   XP_016867425
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,310,443 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047420116   ⟹   XP_047276072
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,291,545 (+)NCBI
RefSeq Acc Id: XM_047420117   ⟹   XP_047276073
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,323,430 (+)NCBI
RefSeq Acc Id: XM_054357759   ⟹   XP_054213734
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,465 - 99,562,122 (+)NCBI
RefSeq Acc Id: XM_054357760   ⟹   XP_054213735
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,465 - 99,522,292 (+)NCBI
RefSeq Acc Id: XM_054357761   ⟹   XP_054213736
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,465 - 99,541,181 (+)NCBI
RefSeq Acc Id: XM_054357762   ⟹   XP_054213737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,465 - 99,539,960 (+)NCBI
RefSeq Acc Id: XM_054357763   ⟹   XP_054213738
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,427 - 99,541,181 (+)NCBI
RefSeq Acc Id: XM_054357764   ⟹   XP_054213739
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,427 - 99,562,119 (+)NCBI
RefSeq Acc Id: XR_007059996
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,310,443 (+)NCBI
RefSeq Acc Id: XR_007059997
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,310,443 (+)NCBI
RefSeq Acc Id: XR_007059998
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,310,443 (+)NCBI
RefSeq Acc Id: XR_007059999
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,323,430 (+)NCBI
RefSeq Acc Id: XR_007060000
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,310,443 (+)NCBI
RefSeq Acc Id: XR_008487550
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,465 - 99,541,181 (+)NCBI
RefSeq Acc Id: XR_008487551
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,465 - 99,541,181 (+)NCBI
RefSeq Acc Id: XR_008487552
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,427 - 99,541,181 (+)NCBI
RefSeq Acc Id: XR_008487553
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,427 - 99,562,119 (+)NCBI
RefSeq Acc Id: XR_008487554
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0799,512,427 - 99,541,181 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001152963 (Get FASTA)   NCBI Sequence Viewer  
  NP_056194 (Get FASTA)   NCBI Sequence Viewer  
  XP_016867420 (Get FASTA)   NCBI Sequence Viewer  
  XP_016867421 (Get FASTA)   NCBI Sequence Viewer  
  XP_016867422 (Get FASTA)   NCBI Sequence Viewer  
  XP_016867423 (Get FASTA)   NCBI Sequence Viewer  
  XP_016867425 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276072 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276073 (Get FASTA)   NCBI Sequence Viewer  
  XP_054213734 (Get FASTA)   NCBI Sequence Viewer  
  XP_054213735 (Get FASTA)   NCBI Sequence Viewer  
  XP_054213736 (Get FASTA)   NCBI Sequence Viewer  
  XP_054213737 (Get FASTA)   NCBI Sequence Viewer  
  XP_054213738 (Get FASTA)   NCBI Sequence Viewer  
  XP_054213739 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD05167 (Get FASTA)   NCBI Sequence Viewer  
  AAF18565 (Get FASTA)   NCBI Sequence Viewer  
  AAH18737 (Get FASTA)   NCBI Sequence Viewer  
  AAH62370 (Get FASTA)   NCBI Sequence Viewer  
  BAB32785 (Get FASTA)   NCBI Sequence Viewer  
  EAW76713 (Get FASTA)   NCBI Sequence Viewer  
  EAW76714 (Get FASTA)   NCBI Sequence Viewer  
  EAW76715 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000297290
  ENSP00000297290.3
  ENSP00000440936
  ENSP00000440936.1
  ENSP00000459133.1
GenBank Protein O95415 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001152963   ⟸   NM_001159491
- Peptide Label: isoform b
- UniProtKB: F5GXW6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_056194   ⟸   NM_015379
- Peptide Label: isoform a
- UniProtKB: Q8WV52 (UniProtKB/Swiss-Prot),   F5GXW6 (UniProtKB/Swiss-Prot),   D6W5R8 (UniProtKB/Swiss-Prot),   Q9UIC6 (UniProtKB/Swiss-Prot),   O95415 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016867425   ⟸   XM_017011936
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_016867422   ⟸   XM_017011933
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_016867420   ⟸   XM_017011931
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016867423   ⟸   XM_017011934
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_016867421   ⟸   XM_017011932
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSP00000459133   ⟸   ENST00000491463
RefSeq Acc Id: ENSP00000297290   ⟸   ENST00000297290
RefSeq Acc Id: ENSP00000440936   ⟸   ENST00000539286
RefSeq Acc Id: XP_047276073   ⟸   XM_047420117
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047276072   ⟸   XM_047420116
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054213739   ⟸   XM_054357764
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054213738   ⟸   XM_054357763
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054213734   ⟸   XM_054357759
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054213736   ⟸   XM_054357761
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054213737   ⟸   XM_054357762
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054213735   ⟸   XM_054357760
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O95415-F1-model_v2 AlphaFold O95415 1-125 view protein structure

Promoters
RGD ID:6805285
Promoter ID:HG_KWN:58747
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001159491,   NM_015379,   OTTHUMT00000334675,   OTTHUMT00000334676
Position:
Human AssemblyChrPosition (strand)Source
Build 36797,748,381 - 97,749,112 (+)MPROMDB
RGD ID:6813151
Promoter ID:HG_ACW:73459
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:BRI3.LAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 36797,750,531 - 97,751,031 (+)MPROMDB
RGD ID:7211167
Promoter ID:EPDNEW_H11329
Type:initiation region
Name:BRI3_1
Description:brain protein I3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H11328  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38798,281,686 - 98,281,746EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:1109 AgrOrtholog
COSMIC BRI3 COSMIC
Ensembl Genes ENSG00000164713 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000297290 ENTREZGENE
  ENST00000297290.4 UniProtKB/Swiss-Prot
  ENST00000491463.4 UniProtKB/TrEMBL
  ENST00000539286 ENTREZGENE
  ENST00000539286.5 UniProtKB/Swiss-Prot
GTEx ENSG00000164713 GTEx
HGNC ID HGNC:1109 ENTREZGENE
Human Proteome Map BRI3 Human Proteome Map
InterPro Brain_I3 UniProtKB/Swiss-Prot
KEGG Report hsa:25798 UniProtKB/Swiss-Prot
NCBI Gene 25798 ENTREZGENE
OMIM 615628 OMIM
PANTHER BRAIN PROTEIN I3 UniProtKB/Swiss-Prot
  PTHR13551 UniProtKB/Swiss-Prot
Pfam DUF2367 UniProtKB/Swiss-Prot
PharmGKB PA25422 PharmGKB
UniProt BRI3_HUMAN UniProtKB/Swiss-Prot
  D6W5R8 ENTREZGENE
  F5GXW6 ENTREZGENE
  I3L1V6_HUMAN UniProtKB/TrEMBL
  O95415 ENTREZGENE
  Q8WV52 ENTREZGENE
  Q9UIC6 ENTREZGENE
UniProt Secondary D6W5R8 UniProtKB/Swiss-Prot
  F5GXW6 UniProtKB/Swiss-Prot
  Q8WV52 UniProtKB/Swiss-Prot
  Q9UIC6 UniProtKB/Swiss-Prot