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Gene: Kiaa0319 (KIAA0319 homolog) Rattus norvegicus

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Symbol:

Kiaa0319

Name:

KIAA0319 homolog

RGD ID:

1307443

Description:

Predicted to be involved in negative regulation of dendrite development and neuron migration. Predicted to act upstream of or within several processes, including central nervous system development; negative regulation of axon extension involved in regeneration; and positive regulation of SMAD protein signal transduction. Predicted to be located in early endosome. Predicted to be active in cytoplasmic vesicle and plasma membrane. Orthologous to human KIAA0319 (KIAA0319); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; endosulfan.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

dyslexia susceptibility 2; dyslexia-associated protein KIAA0319 homolog; KIAA0319 protein; LOC361244; RGD1307443; similar to mKIAA0319 protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KIAA0319 (KIAA0319)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	D130043K22Rik (RIKEN cDNA D130043K22 gene)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Kiaa0319 (KIAA0319 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KIAA0319 (KIAA0319 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KIAA0319 (KIAA0319)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Kiaa0319 (KIAA0319 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KIAA0319 (KIAA0319)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KIAA0319 (KIAA0319 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Kiaa0319 (KIAA0319 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Kiaa0319 (KIAA0319 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	DHX15 (DEAH-box helicase 15)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	D130043K22Rik (RIKEN cDNA D130043K22 gene)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	KIAA0319	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:ch73-215d9.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:ch73-215d9.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG7565	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	kiaa0319	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	kiaa0319	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	40,587,001 - 40,654,525 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	40,590,546 - 40,653,679 (-)	Ensembl				GRCr8
mRatBN7.2	17	40,162,512 - 40,226,666 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	40,165,084 - 40,225,653 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	40,233,213 - 40,293,842 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	41,837,269 - 41,897,887 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	40,120,468 - 40,181,116 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	42,163,245 - 42,226,725 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	42,165,817 - 42,226,377 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	44,031,044 - 44,094,370 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	47,226,680 - 47,287,240 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	39,802,603 - 39,862,958 (-)	NCBI		Celera
RGSC_v3.1	17	47,230,128 - 47,279,391 (-)	NCBI
Cytogenetic Map	17	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP)

butanal (ISO)

cisplatin (ISO)

Dibutyl phosphate (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

formaldehyde (ISO)

gentamycin (EXP)

ketamine (EXP)

Lasiocarpine (ISO)

lead(0) (ISO)

lipopolysaccharide (ISO)

methapyrilene (ISO)

okadaic acid (ISO)

pentanal (ISO)

phenylmercury acetate (ISO)

propanal (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

sunitinib (ISO)

trichloroethene (EXP)

triclosan (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of axon extension (ISO)

negative regulation of axon extension involved in regeneration (ISO)

negative regulation of dendrite development (IEA,ISO)

nervous system development (IEA)

neuron migration (IBA,IEA,ISO)

positive regulation of SMAD protein signal transduction (ISO)

response to auditory stimulus (IEA)

Cellular Component

cytoplasmic vesicle (IBA)

early endosome (IEA,ISO)

early endosome membrane (IEA)

plasma membrane (IBA,IEA,ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15057822	PMID:16600991	PMID:16989952	PMID:19419997	PMID:19679544	PMID:23220223	PMID:23395846	PMID:24871331	PMID:27510895	PMID:28334068	PMID:29045729

Genomics

Comparative Map Data

Kiaa0319
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	40,587,001 - 40,654,525 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	40,590,546 - 40,653,679 (-)	Ensembl				GRCr8
mRatBN7.2	17	40,162,512 - 40,226,666 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	40,165,084 - 40,225,653 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	40,233,213 - 40,293,842 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	41,837,269 - 41,897,887 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	40,120,468 - 40,181,116 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	42,163,245 - 42,226,725 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	42,165,817 - 42,226,377 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	44,031,044 - 44,094,370 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	47,226,680 - 47,287,240 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	39,802,603 - 39,862,958 (-)	NCBI		Celera
RGSC_v3.1	17	47,230,128 - 47,279,391 (-)	NCBI
Cytogenetic Map	17	p11	NCBI

KIAA0319
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	24,540,141 - 24,646,191 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	24,544,104 - 24,646,191 (-)	Ensembl			hg38	GRCh38
GRCh37	6	24,544,335 - 24,646,419 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	24,652,311 - 24,754,362 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	6	25,777,709 - 25,879,725 (-)	NCBI		Celera
Cytogenetic Map	6	p22.3	NCBI
HuRef	6	24,493,749 - 24,595,804 (-)	NCBI		HuRef
CHM1_1	6	24,548,492 - 24,650,521 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	24,414,072 - 24,516,155 (-)	NCBI		T2T-CHM13v2.0

D130043K22Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	25,029,114 - 25,085,422 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	25,029,118 - 25,085,253 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	24,845,131 - 24,901,439 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	24,845,135 - 24,901,270 (+)	Ensembl			mm10	GRCm38
MGSCv37	13	24,937,000 - 24,993,139 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	24,852,596 - 24,908,735 (+)	NCBI		MGSCv36	mm8
Celera	13	25,075,796 - 25,131,935 (+)	NCBI		Celera
Cytogenetic Map	13	A3.1	NCBI
cM Map	13	10.72	NCBI

Kiaa0319
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955483	2,413,181 - 2,462,735 (+)	Ensembl
ChiLan1.0	NW_004955483	2,404,061 - 2,463,210 (+)	NCBI	ChiLan1.0	ChiLan1.0

KIAA0319
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	39,194,856 - 39,296,821 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	35,194,572 - 35,296,284 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	24,377,666 - 24,483,388 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	24,713,922 - 24,815,300 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	24,713,922 - 24,815,300 (-)	Ensembl			panPan2	panpan1.1

KIAA0319
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	22,589,103 - 22,689,549 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	35	22,591,353 - 22,652,292 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	35	22,556,996 - 22,657,004 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	35	22,711,229 - 22,811,382 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	35	22,711,238 - 22,810,979 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	35	22,516,640 - 22,574,230 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	35	22,564,620 - 22,664,450 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	35	24,000,847 - 24,100,756 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Kiaa0319
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	2,708,741 - 2,751,526 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936671	870,695 - 912,727 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936671	870,107 - 912,727 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KIAA0319
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	19,383,196 - 19,486,265 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	19,383,189 - 19,487,669 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	20,533,670 - 20,639,029 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KIAA0319
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	47,603,506 - 47,702,154 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	47,603,705 - 47,696,302 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	24,471,322 - 24,576,965 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kiaa0319
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624756	2,377,846 - 2,459,936 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624756	2,377,573 - 2,464,766 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Kiaa0319
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	43,900,258 - 43,951,075 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Kiaa0319
734 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	80
Count of miRNA genes:	67
Interacting mature miRNAs:	76
Transcripts:	ENSRNOT00000024536
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8552966	Pigfal18	Plasma insulin-like growth factor 1 level QTL 18	8.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	17	12860942	57860942	Rat
1300123	Bp194	Blood pressure QTL 194	2.82		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	2120843	42054133	Rat
2302377	Scl61	Serum cholesterol level QTL 61	4.36		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	17	6221998	58177198	Rat
1354654	Spl7	Serum phospholipid level QTL 7	5.5		blood phospholipid amount (VT:0006084)	blood phospholipid level (CMO:0001169)	17	38031354	83031354	Rat
70157	Niddm32	Non-insulin dependent diabetes mellitus QTL 32	4.34		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	17	22660799	55604694	Rat
9589151	Insul30	Insulin level QTL 30	8.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	17	12860942	57860942	Rat
1354628	Stl13	Serum triglyceride level QTL 13	3.8		blood triglyceride amount (VT:0002644)	blood triglyceride level (CMO:0000118)	17	21498994	50592236	Rat
1354629	Scl31	Serum cholesterol level QTL 31	4.1		blood cholesterol amount (VT:0000180)	blood total cholesterol level (CMO:0000051)	17	38031354	83031354	Rat
1600398	Edcs5	Endometrial carcinoma susceptibility QTL 5	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	17	35446949	75762341	Rat
9590154	Scort9	Serum corticosterone level QTL 9	23.57	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	12860942	57860942	Rat
1559055	Bp278	Blood pressure QTL 278		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	23858926	68858926	Rat
152025238	Slep14	Serum leptin concentration QTL 14	4.62		blood leptin amount (VT:0005667)		17	24390595	84432719	Rat
1354638	Insul1	Insulin level QTL 1	4.8		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	17	38031354	83031354	Rat
1354635	Bp245	Blood pressure QTL 245	6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	38031354	83031354	Rat
1331765	Hrtrt15	Heart rate QTL 15	4.094		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	17	15537025	60531414	Rat
7411666	Foco31	Food consumption QTL 31	11.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	17	12860942	57860942	Rat
2303627	Vencon8	Ventilatory control QTL 8		0.001	respiration trait (VT:0001943)	tidal volume (CMO:0000222)	17	4733534	49733534	Rat
4889955	Bss93	Bone structure and strength QTL 93	4.4		tibia size trait (VT:0100001)	tibia cortical bone volume to tibia total bone volume ratio (CMO:0001727)	17	27233445	65155015	Rat
1354662	Rf49	Renal function QTL 49	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	17	1	43999106	Rat
152023740	Bp406	Blood pressure QTL 406	6.06		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
1354663	Bvd5	Brain ventricular dilatation QTL 5	3.51	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	17	32199534	86201342	Rat
7488966	Bp370	Blood pressure QTL 370		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	23858926	68858926	Rat
1354658	Spl8	Serum phospholipid level QTL 8	3.8		blood VLDL phospholipid amount (VT:0010507)	blood very low density lipoprotein phospholipid level (CMO:0001571)	17	1	43999106	Rat
152023737	Bp405	Blood pressure QTL 405	5.06		arterial blood pressure trait (VT:2000000)			24136127	84432719	Rat
152023736	Bp404	Blood pressure QTL 404	3.78		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
724528	Uae4	Urinary albumin excretion QTL 4	4.9	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	17	36045537	81045537	Rat
1354581	Bp247	Blood pressure QTL 247	4.5		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	17	1	43999106	Rat
2300002	Iddm36	Insulin dependent diabetes mellitus QTL 36	1.98		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	17	9266755	40968173	Rat
70210	Cm15	Cardiac mass QTL 15	6.5		heart right ventricle mass (VT:0007033)	heart right ventricle wet weight (CMO:0000072)	17	30066472	75066472	Rat
152023626	Bp403	Blood pressure QTL 403	3.86		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
9590107	Sffal7	Serum free fatty acids level QTL 7	4.81	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	17	33104645	78104645	Rat
724549	Niddm56	Non-insulin dependent diabetes mellitus QTL 56		0.03	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	17	32199534	49497050	Rat
1581512	Cm55	Cardiac mass QTL 55	2.8	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	17	27233445	83975845	Rat
10054088	Scort28	Serum corticosterone level QTL 28	2.04	0.0102	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	4733534	49733534	Rat
61394	Bp8	Blood pressure QTL 8	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	23286322	64246472	Rat
9589057	Scfw6	Subcutaneous fat weight QTL 6	8.62	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	17	12860942	57860942	Rat
2317045	Aia11	Adjuvant induced arthritis QTL 11	4.06		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	17	26522051	71522051	Rat
10450503	Bp386	Blood pressure QTL 386		0.28	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	22019705	67019705	Rat
9590088	Insglur7	Insulin/glucose ratio QTL 7	20.38	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	17	12860942	57860942	Rat
2313854	Bp343	Blood pressure QTL 343	3.9		life span trait (VT:0005372)	age at time of death (CMO:0001193)	17	32199534	55604694	Rat
2317053	Aia25	Adjuvant induced arthritis QTL 25	2.69		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	17	10604694	55604694	Rat
8552928	Pigfal9	Plasma insulin-like growth factor 1 level QTL 9	9		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	17	33104645	78104645	Rat
12903980	Cm120	Cardiac mass QTL 120		0.002	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	17	23858926	68858926	Rat
12903981	Am17	Aortic mass QTL 17		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	17	23858926	68858926	Rat
4889891	Eae32	Experimental allergic encephalomyelitis QTL 32	4.8	0.0002	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	17	27233445	72233445	Rat
12903982	Kidm70	Kidney mass QTL 70		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	17	23858926	68858926	Rat
12903978	Cm118	Cardiac mass QTL 118		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	17	23858926	68858926	Rat
12903979	Cm119	Cardiac mass QTL 119		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	17	23858926	68858926	Rat
1354619	Bp242	Blood pressure QTL 242	6.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	37687877	82687877	Rat

Markers in Region

D17Rat19

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	17	40,651,980 - 40,652,135 (+)	Marker Load Pipeline
mRatBN7.2	17	40,223,952 - 40,224,109 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	42,224,679 - 42,224,833	NCBI	Rnor6.0
Rnor_5.0	17	44,092,478 - 44,092,632	UniSTS	Rnor5.0
RGSC_v3.4	17	47,285,541 - 47,285,696	RGD	RGSC3.4
RGSC_v3.4	17	47,285,542 - 47,285,696	UniSTS	RGSC3.4
Celera	17	39,861,260 - 39,861,414	UniSTS
RGSC_v3.1	17	47,288,382 - 47,288,537	RGD
SHRSP x BN Map	17	30.3699	RGD
SHRSP x BN Map	17	30.3699	UniSTS
FHH x ACI Map	17	34.46	RGD
Cytogenetic Map	17	p11	UniSTS

D17Got45

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	40,200,266 - 40,200,450 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	42,200,997 - 42,201,180	NCBI	Rnor6.0
Rnor_5.0	17	44,068,796 - 44,068,979	UniSTS	Rnor5.0
RGSC_v3.4	17	47,261,859 - 47,262,043	RGD	RGSC3.4
RGSC_v3.4	17	47,261,860 - 47,262,043	UniSTS	RGSC3.4
Celera	17	39,837,565 - 39,837,748	UniSTS
RGSC_v3.1	17	47,264,700 - 47,264,884	RGD
RH 2.0 Map	17	314.3	RGD
Cytogenetic Map	17	p11	UniSTS

BF403768

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	40,165,643 - 40,165,808 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	42,166,377 - 42,166,541	NCBI	Rnor6.0
Rnor_5.0	17	44,034,176 - 44,034,340	UniSTS	Rnor5.0
RGSC_v3.4	17	47,227,240 - 47,227,404	UniSTS	RGSC3.4
Celera	17	39,803,163 - 39,803,327	UniSTS
Cytogenetic Map	17	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	8	24	148	53	52	22	61	22	6	193	112	7	129	36	82	30	12	12

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001197023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000024536 ⟹ ENSRNOP00000024536

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	40,590,546 - 40,653,679 (-)	Ensembl
mRatBN7.2 Ensembl	17	40,165,084 - 40,225,653 (-)	Ensembl
Rnor_6.0 Ensembl	17	42,165,817 - 42,226,377 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115483 ⟹ ENSRNOP00000082823

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	40,590,546 - 40,640,970 (-)	Ensembl
mRatBN7.2 Ensembl	17	40,165,084 - 40,212,941 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000123476 ⟹ ENSRNOP00000108764

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	40,590,546 - 40,653,679 (-)	Ensembl

RefSeq Acc Id:

NM_001197023 ⟹ NP_001183952

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,590,546 - 40,653,679 (-)	NCBI
mRatBN7.2	17	40,162,512 - 40,225,653 (-)	NCBI
Rnor_6.0	17	42,165,817 - 42,226,377 (-)	NCBI
Rnor_5.0	17	44,031,044 - 44,094,370 (-)	NCBI
Celera	17	39,802,603 - 39,862,958 (-)	NCBI

Sequence:

show sequence

GCGCTGAATCACCAGCACCCGCTGGCAGCATCTGTGCAGCCTCAGGGGTGGGCAGGTGTCGCCT
GCAGGTGTGCCTCGCAGGTGGCCCGACCGGACCTCAGCTACTGGGCAGTCTGGAGCAGCACGGA
GCCTGGAGATCGCTGGGAATGGAGTTCTAGAAGGCTACATCTGACTGGCTCATCAACCATCAAA
GAGAGTCTTTCTAAATCCACTGCCTTGGAAGCCTCATCCTGTGTGAGGCAGAATGGTGTCCCCA
CCAGGAGTACTGTCTTCCTTGCTGCTGCTGGCAGCCATGGCAGGTGGCAGCTCTCAGCAGTGCT
CTGAGGGCAGGACTTACTCCGACGCCATCATTTCACCTAACCTGGAAAGCATTAGAATCATGCG
GGTGTCTCACACCTTCTCTGTGGGAGACTGTACAGCAGCTTGCTGTGACTTGCCCAGCTGTGAC
CTGGCCTGGTGGTTTGAGGGCAGCTGCTATCTGGTGAACTGCATGCGCCCGGAGAACTGCGAGC
CCAGGACCACAGGCCCCATCCGATCTTACCTCACTTTCGTGCGCAGACCTGTCCAGAGGTCTGG
GCAGCTGCTGGACTATGGAGACATGATGCTAGGCAGGGGCTCCCCTTCAGGAGCTTGGGGAGAC
TCCCTTGAGGACCTCAGGAAGGACTTGCCCTTTCTAGGCAAAGATGGGGGGCCAGAGGAGACTG
CTGAGTACTCGGATGATTACAAGGAACTGGAGCGGGGCCTCCTGCAACCCTCCAACCAACAAGA
CCCCAGAGGCAGCGCAGAGTACCCCGACTGGAGCCTGCTGCCCAGCAGTGATGGAGATTTCAAT
GCTTCAGCTACGGGAGACAACTCAGCTGCTTCCACAGAGAAGCTGCAGGACCTCACGCCCTACC
CACTGGACCAGGAGCAGCTGCAGTCCCTGAATGAGTCAACTTGGTCCCCTACACCCAGACACTC
TGAAATGAGCAGTATGTGGCCTTCCTCTGTGACTGCATCACCTACAGAAGAGGGACTGGAGGGA
GAAGAGACTTTACAGCTCCAAGAGCAACCAAACAATAGTTCTGGAAAAAAGGTTCCAATGCCTT
CCCATAATCCTTCCCCTGCCAGCCTGGAGTCTAGCCCAACCACGGTGGAAAAGAGCTCCATTTT
TACAGTCACTCCATGGAGCAGAGATCCTGGCACCCCAACATTTCCTGCCAGTACAGTCCTCCCT
GGGCTGATCTCACCTTCGTGGCCCTTGTCACCTACCACTTCCAGGACAGTAAAGGCTCTTGCTG
TGTCTGCTGGAGATAACTTAGTACTAACCTTACCCAATGGAGAAGCAGAACTGAAGGCCTCTGT
TGAGCCAGCGCCCCCTGCAGACACAGCTTACACCTATGAATGGAGTTTAATGAGCCATCCTGTA
GACTTCCAAGGTAAAATCAAACAAGAAAACAAGCCGACTCTTCACCTTTCTCAGTTGTCTGTGG
GTCTCTATGCCTTCAGAGTGGCTGTTTCTGGTGAGAATGCATTTGGAGAAGGATATGTCAATGT
CACAGTTATGCCAGCTGCAAGAATCAATCAGCCACCTGTAGCTATTGTTTCTCCCCAGATACAA
GAGCTCAGTTTGCCTTTGACCTCAGCCCTGATTGACGGCAGCCAAAGTACAGATGATGCTGAAA
TTGTGAGTTACCACTGGGAAGAAGTCGACGGGCCCTTCCTAGGAGAGGCCTTTCTGGACGATTC
CCCACTCTTACGATTGTCGAATCTAGATCCTGGTAACTACACTTTTAGGTTGACCATCACAGAC
TCAGATGGCGCTACTAACTCCACCACTGCAGCCCTCATCATCCGTGGTTCTTTGGACTACCCAC
CTGTTGCCAATGCAGGACCAAATCAGACCATCACTTTGCCCCAAAACACCATCATACTGAACGG
GAACCAGAGCAGTGATGATCACCAGATTGTCCTCTATGAGTGGTTCCCAGACCCTGGTGGTGAG
AGCAAGGAGATGGTCATGCAGGGAGCACAGACCCCATACCTCCACTTGTCTGAGCTGCAGGAAG
GAGAGTACACGTTCCAACTGATGGTGACGGATTCCTCAGGACAGCAATCCACTGCTTTGGTCAC
TCTGACTGTCCAGGCTGAAAACAACCAGGCTCCGGTGGCTGTGGCAGGCCCTGATAAGGAGCTG
GTTTTCCCAGTGCAGAGTGCTATGCTGGATGGGAGCAGGAGCAGTGATGATCACGGCATTGTCT
GCTACCGCTGGGAGCACATCAGAGGCCCCAGTGCAGTGGAGATGGAGAATGTGGACAAAGCCAT
AGCCACTGTCACCGGGCTTCAGGTGGGTACCTACCACTTCCGGCTAACTGTGAGAGACCAGCAG
GGTCTGAGCAGCACATCCACCCTCACTGTGGCTGTGAAGAAGGAAAATAATAGTCCTCCCAGAG
CCCAGGCTGGTGGCAGACATGTTCTTATGCTTCCCAATAATTCCATTACTTTGGACGGTTCAAG
GTCTACTGATGACCGAGGAATTGTGTCCTATCTATGGATCCGGGATGGCCAGAGTCCAGCTGCT
GGAGATATCATTGGAAGCTCTGACAACGGGGCGGCTCTGCAGCTCACCAATCTGGTGGAAGGAG
TCTACACTTTTCACTTGCTGGTCACTGACAGTCAGGGGGCCTCCGACTCAGACACTGCCATTGT
GGAGGTGCTGCCAGACCCCAAGAAGGATGGCATGGTGGAGTTGATCCTGCAGGTTGGTGTTGAG
CAGCTGACAGAGCAGCAGAAGGAAACTCTAGTGAGGCAACTGGCTGTGCTTCTGAATGTGCTAG
ACTCAGACGTGAAAGTGTTGAAGATCCAGGCTCACACGGATGTCAGCACTGTGATTGTATTTTA
TGTACAGAGTGGGTCACCTTTCAAGGTTCTCAGAGCTGCTGACGTGGCCAGGAATCTGCACAAG
CGGCTTTCCAAGGAGAAGGGGGCTTTCCTGCTTTTCAAGGTCTTGAGGATAGACACAGCAGGAT
GCCTTCTCAAGTGTTCAGGCCATGGTCACTGTGACCCCATCACAAAGCGTTGCATTTGCTCCCA
GCTGTGGATGGAGAACCTCCTACAGCGGTACATGTGGGATGGCGAGAGCAACTGTGAGTGGAGT
GTATTCTACGTGGCAGCTCTGGCGTTGACCCTAACAGTGCTAACTGGAGCTGTGACTTGGGTGT
GCATCTGCTGTTGCAGGAGACGAAAAAGGACTAAGATAAGGAAGAAAACAAAGTACACCATCCT
AGACAACATGGATGAACAGGAAAGAATGGAACTGAGGCCCAAATACGGTATCAAGCACAGGAGC
ACCGAGCACAACTCCAGTCTGATGGTGTCGGAGTCTGAGTTTGAAAGCGACCAGGACACACTAT
TCAGCCAAGAAAGGATGGAGAGAGGAGTTCTGAAGGGTTCCCTGAATGGCTCTGCTAGAAGTGG
AGTTTCCTTTGGTTATTACTCAAAGGACAGATAACAGGATGTTGTGGAAGGACCTCACGAGCTT
GTGACTCAGTACCGGATGCTGGGAGTTATCACAAAGCTGACTCCTGCTTGGCACAGTGCATTGG
CACCTCTCTCCAGGGGCCTTGCTCTGTGCTCCACAGAGTGATTCAAAGACCCAGGTTTTTGGAA
CTTTCAAGACACAAAACAAAATCCTGCTTATTCAACTGATGCTCATCAATAGAGAAAAGGGGTG
CATAAAACCTCTGCGGAGTCGACTGAAAAGTTTTGTGTCTCCGTAGCGAACACTTTATTATAGT
TATTGTCCATGATGAAATTAGGCTAACACCCGTTTCTATTTCTAGCCCACAGGAAAGACAAGTT
AAGAAGGGTTGATTCTCTATAGAAGCTGTGACTGCCTTTAAGAACCTTCCAGAAGCAGCTTCTC
AGAGGCCCTGCAGGATCAATGTGTAGTTCATCTGCGAGGGAGGAACCATCTGTGTGTAGCTTCC
TGTCTGTGATGCAGCTAGGTGTGGCTAGCTAGAAGGTCAGGAACTAAGGAAGCAGCAGAATCTA
AGGACAGCAGGCAATAGAGATGGGGAGGGGCGAATGACCTGCAGGTTAAGTGTTGAAGGTAGCC
TT

hide sequence

RefSeq Acc Id:

XM_006253936 ⟹ XP_006253998

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,587,001 - 40,654,519 (-)	NCBI
mRatBN7.2	17	40,162,512 - 40,226,659 (-)	NCBI
Rnor_6.0	17	42,163,245 - 42,226,725 (-)	NCBI
Rnor_5.0	17	44,031,044 - 44,094,370 (-)	NCBI

Sequence:

show sequence

TCCTTGATTTGAAAGCAGCACTTATAATCAAGTAGATAAATTATGAGGGTGGAAGGGGTGTCAT
GCAAAAGGCTTGGCTGAAAACAAGACTTGAATAGTCAGGTGACTTGACTGAGTAGTCTGAGGCA
AGCAGTGCTTGCTATCGGGTGGAGCATTTTTCTAGGAGACCTGTCCATCCTTTCACCAGTTTAG
AACCATGGCAGGAAAGAGGTGGGCCAGGGACCAGAGCAAGGAAACAAATGGAGGCCCCTCTGTT
TAGTGGGGCAGTGCGGGCTGCGGCACAGGCCATCCCTAGGGGCGTGTATGCGCGTGCGTATGCG
TCGCCCTGGTAACCCGGGAGGCAGAAAGGCGCTGAATCACCAGCACCCGCTGGCAGCATCTGTG
CAGCCTCAGGGGTGGGCAGGTGTCGCCTGCAGGTGTGCCTCGCAGGTGGCCCGACCGGACCTCA
GCTACTGGGCAGTCTGGAGCAGCACGGAGCCTGGAGATCGCTGGGAATGGAGTTCTAGAAGGCT
ACATCTGACTGGCTCATCAACCATCAAAGAGAGTCTTTCTAAATCCACTGCCTTGGAAGCCTCA
TCCTGTGTGAGGCAGAATGGTGTCCCCACCAGGAGTACTGTCTTCCTTGCTGCTGCTGGCAGCC
ATGGCAGGTGGCAGCTCTCAGCAGTGCTCTGAGGGCAGGACTTACTCCGACGCCATCATTTCAC
CTAACCTGGAAAGCATTAGAATCATGCGGGTGTCTCACACCTTCTCTGTGGGAGACTGTACAGC
AGCTTGCTGTGACTTGCCCAGCTGTGACCTGGCCTGGTGGTTTGAGGGCAGCTGCTATCTGGTG
AACTGCATGCGCCCGGAGAACTGCGAGCCCAGGACCACAGGCCCCATCCGATCTTACCTCACTT
TCGTGCGCAGACCTGTCCAGAGGTCTGGGCAGCTGCTGGACTATGGAGACATGATGCTAGGCAG
GGGCTCCCCTTCAGGAGCTTGGGGAGACTCCCTTGAGGACCTCAGGAAGGACTTGCCCTTTCTA
GGCAAAGATGGGGGGCCAGAGGAGACTGCTGAGTACTCGGATGATTACAAGGAACTGGAGCGGG
GCCTCCTGCAACCCTCCAACCAACAAGACCCCAGAGGCAGCGCAGAGTACCCCGACTGGAGCCT
GCTGCCCAGCAGTGATGGAGATTTCAATGCTTCAGCTACGGGAGACAACTCAGCTGCTTCCACA
GAGAAGCTGCAGGACCTCACGCCCTACCCACTGGACCAGGAGCAGCTGCAGTCCCTGAATGAGT
CAACTTGGTCCCCTACACCCAGACACTCTGAAATGAGCAGTATGTGGCCTTCCTCTGTGACTGC
ATCACCTACAGAAGAGGGACTGGAGGGAGAAGAGACTTTACAGCTCCAAGAGCAACCAAACAAT
AGTTCTGGAAAAAAGGTTCCAATGCCTTCCCATAATCCTTCCCCTGCCAGCCTGGAGTCTAGCC
CAACCACGGTGGAAAAGAGCTCCATTTTTACAGTCACTCCATGGAGCAGAGATCCTGGCACCCC
AACATTTCCTGCCAGTACAGTCCTCCCTGGGCTGATCTCACCTTCGTGGCCCTTGTCACCTACC
ACTTCCAGGACAGTAAAGGCTCTTGCTGTGTCTGCTGGAGATAACTTAGTACTAACCTTACCCA
ATGGAGAAGCAGAACTGAAGGCCTCTGTTGAGCCAGCGCCCCCTGCAGACACAGCTTACACCTA
TGAATGGAGTTTAATGAGCCATCCTGTAGACTTCCAAGGTAAAATCAAACAAGAAAACAAGCCG
ACTCTTCACCTTTCTCAGTTGTCTGTGGGTCTCTATGCCTTCAGAGTGGCTGTTTCTGGTGAGA
ATGCATTTGGAGAAGGATATGTCAATGTCACAGTTATGCCAGCTGCAAGAATCAATCAGCCACC
TGTAGCTATTGTTTCTCCCCAGATACAAGAGCTCAGTTTGCCTTTGACCTCAGCCCTGATTGAC
GGCAGCCAAAGTACAGATGATGCTGAAATTGTGAGTTACCACTGGGAAGAAGTCGACGGGCCCT
TCCTAGGAGAGGCCTTTCTGGACGATTCCCCACTCTTACGATTGTCGAATCTAGATCCTGGTAA
CTACACTTTTAGGTTGACCATCACAGACTCAGATGGCGCTACTAACTCCACCACTGCAGCCCTC
ATCATCCGTGGTTCTTTGGACTACCCACCTGTTGCCAATGCAGGACCAAATCAGACCATCACTT
TGCCCCAAAACACCATCATACTGAACGGGAACCAGAGCAGTGATGATCACCAGATTGTCCTCTA
TGAGTGGTTCCCAGACCCTGGTGGTGAGAGCAAGGAGATGGTCATGCAGGGAGCACAGACCCCA
TACCTCCACTTGTCTGAGCTGCAGGAAGGAGAGTACACGTTCCAACTGATGGTGACGGATTCCT
CAGGACAGCAATCCACTGCTTTGGTCACTCTGACTGTCCAGGCTGAAAACAACCAGGCTCCGGT
GGCTGTGGCAGGCCCTGATAAGGAGCTGGTTTTCCCAGTGCAGAGTGCTATGCTGGATGGGAGC
AGGAGCAGTGATGATCACGGCATTGTCTGCTACCGCTGGGAGCACATCAGAGGCCCCAGTGCAG
TGGAGATGGAGAATGTGGACAAAGCCATAGCCACTGTCACCGGGCTTCAGGTGGGTACCTACCA
CTTCCGGCTAACTGTGAGAGACCAGCAGGGTCTGAGCAGCACATCCACCCTCACTGTGGCTGTG
AAGAAGGAAAATAATAGTCCTCCCAGAGCCCAGGCTGGTGGCAGACATGTTCTTATGCTTCCCA
ATAATTCCATTACTTTGGACGGTTCAAGGTCTACTGATGACCGAGGAATTGTGTCCTATCTATG
GATCCGGGATGGCCAGAGTCCAGCTGCTGGAGATATCATTGGAAGCTCTGACAACGGGGCGGCT
CTGCAGCTCACCAATCTGGTGGAAGGAGTCTACACTTTTCACTTGCTGGTCACTGACAGTCAGG
GGGCCTCCGACTCAGACACTGCCATTGTGGAGGTGCTGCCAGACCCCAAGAAGGATGGCATGGT
GGAGTTGATCCTGCAGGTTGGTGTTGAGCAGCTGACAGAGCAGCAGAAGGAAACTCTAGTGAGG
CAACTGGCTGTGCTTCTGAATGTGCTAGACTCAGACGTGAAAGTGTTGAAGATCCAGGCTCACA
CGGATGTCAGCACTGTGATTGTATTTTATGTACAGAGTGGGTCACCTTTCAAGGTTCTCAGAGC
TGCTGACGTGGCCAGGAATCTGCACAAGCGGCTTTCCAAGGAGAAGGGGGCTTTCCTGCTTTTC
AAGGTCTTGAGGATAGACACAGCAGAGTGGAGTGTATTCTACGTGGCAGCTCTGGCGTTGACCC
TAACAGTGCTAACTGGAGCTGTGACTTGGGTGTGCATCTGCTGTTGCAGGAGACGAAAAAGGAC
TAAGATAAGGAAGAAAACAAAGTACACCATCCTAGACAACATGGATGAACAGGAAAGAATGGAA
CTGAGGCCCAAATACGGTATCAAGCACAGGAGCACCGAGCACAACTCCAGTCTGATGGTGTCGG
AGTCTGAGTTTGAAAGCGACCAGGACACACTATTCAGCCAAGAAAGGATGGAGAGAGGAGTTCT
GAAGGGTTCCCTGAATGGCTCTGCTAGAAGTGGAGTTTCCTTTGGTTATTACTCAAAGGACAGA
TAACAGGATGTTGTGGAAGGACCTCACGAGCTTGTGACTCAGTACCGGATGCTGGGAGTTATCA
CAAAGCTGACTCCTGCTTGGCACAGTGCATTGGCACCTCTCTCCAGGGGCCTTGCTCTGTGCTC
CACAGAGTGATTCAAAGACCCAGGTTTTTGGAACTTTCAAGACACAAAACAAAATCCTGCTTAT
TCAACTGATGCTCATCAATAGAGAAAAGGGGTGCATAAAACCTCTGCGGAGTCGACTGAAAAGT
TTTGTGTCTCCGTAGCGAACACTTTATTATAGTTATTGTCCATGATGAAATTAGGCTAACACCC
GTTTCTATTTCTAGCCCACAGGAAAGACAAGTTAAGAAGGGTTGATTCTCTATAGAAGCTGTGA
CTGCCTTTAAGAACCTTCCAGAAGCAGCTTCTCAGAGGCCCTGCAGGATCAATGTGTAGTTCAT
CTGCGAGGGAGGAACCATCTGTGTGTAGCTTCCTGTCTGTGATGCAGCTAGGTGTGGCTAGCTA
GAAGGTCAGGAACTAAGGAAGCAGCAGAATCTAAGGACAGCAGGCAATAGAGATGGGGAGGGGC
GAATGACCTGCAGGTTAAGTGTTGAAGGTAGCCTTTAACATTTTTCTCATTCACTTTCTCTAAG
AAAAAGAAACCACGACTGCTTATTATTGTAACTTTTATTGAGAACACTGTGTAGCACTTCCATG
GAAAGCAGGGAGGACTGGGTGATCACAGACATATTCCCAAACTTTAAAATATACTCCTAATGAG
GGGACTGTGGTCACCATGTTCTGAGCCCCTACAAAGACTTCCTAGTGAAATAACTGGACAGAAC
ATTCACCATTTATGCTTAAAAACTTATTTAAGGGACTGGAGAAATGGCTATATATAAGACCTCA
TGGCTCTTGCAGAAGACCTTGGTTCAGTCACCCTTACAATTGTCCAGAACTCCACTTTCTGGTC
TCTGGCAGCAGCAGCAGCATGAGGAATGTGCAGAGTTCATGCATGTAGTTCATACATGAGCATT
AAAAAAATCTTAAAAACATGTTTAAAAATCAAAGAACTAAATTTTATATTAGTTCTTTACACAA
AAAAGATTTATACAATGTCCCCCGAAAAAGCTCCCGCTCTCCCCCCTCAGCCATGAACTGGAGA
TGATTACAGCCTGAGATGTTGATCAGGTTATAGTAGTTGCCCATGGCCCCGAGACTGCTGGCCT
TGGCAATGCCCTTGGCGTTTAGAGAGTGGAAGAGCAGTACGTACGGTAGTCTGAGCTTAGAGAA
AGAGAGTAGAGTGTAGCAGGAATTCAGTGCTAGCCTTGGCCATACAACAGGTTTGAGGGCAACC
TGGACTATATGAGATCCTATGTTAAAAAATGAAAAAAGGAAAAGGTAAAAGAATTAGAATCACA
ATTTAAATTTTAGTAATAGAATTTTCTATTTCTGAGCTGAAAACTCAAAAAACCAAAAATTCAG
AGGCCCCAGTGTATTATACTTTACTGGCGAATTGATCAAATAAAAACGTGTAGGAATATACTTT
TATTTTAAAAGTAATATCTTTATGTCTATATATCATAGTTCAATATTATCTATAATGTTAGAGG
AACAGTGATTTTTTTTTTATTTTAGCACTAGTATTTAGCTTCATAAGCAGAATCTTCCCTATCC
AATGACCAGACTGAGGCTAGTTTAGTGGGTAACCGGACGTTTCTGGCACAGAGAATCCAATAAA
GCATCAAGCTGAAGCCTGTGAACCCTGCTGCTTTATGTGCACGAGTGTGCATCACTCATAGTTG
ACCTTCCCAAGTAATCCTGAAAGAAAACATTCCTCTGTGTTAGGCACCCACCGCAGGTCCAGGG
AGCATAAGTGATTTCCACAGGGATGGAGTCAGTAGATCTGGGAATCGAGTGCTAAGGCCTACTT
TACAGTGCATGAAGAAGTCCAGACATGTTGGAGGGCAAGTCTTGGAGAACCTTCTAGACCCCTG
AAAGTTCTGTTGCTGGGATGAAGAGGAAAGCTTTGAGTGTGCCTGAGAGCAAAAGACAAGTAGG
GGACCATGGACCTGGTGTCTCCCACAGGATCCAGCACACTCTAAGCCACCCATCCTCTAGGTTT
GTAGTGGGCTTGCTGGTTCTGTCCCTGGCTGTCTCAGCCTGGTCTCTCTGATCTATTCATCACA
AAAGAACCTTGAGTCTATAGTGAATCAGAAATAAACATCACAGTGGTTACTGGAAAATGGATCC
TGTCTTGTGACCCACTTGTTCTCGGGGACTGAAAAGGGGGTAAGCCCTCAGCATCCATCTGGTG
CTATCTTGAGACCTGAAGACTCTAAGCTGTTGACAAAGAGAGAAAAACATGTCTCTAGAGCAGC
GATTCTGCGACCCTTTAATACAGCTCCTCATGTTGTGATCCACACTGCAAATTATTGCTTCCTC
ATAACTGTAATTTTGCTACTGTTTTGAATCGTATTGCAAATACCTGCTCTCTGACTCCTCTGGA
GGTTGCAGCCCATGGGCTGAGAAACTGCCGTGGAGGGTGGGAGAACATTTATAGGGTTCAGAGG
CTGAGAGCACAGCTACTTTCTGATTTAGACAAAGATCAAATGCCAGCATTCCCCAACCGAGTAT
GTTTAAAACACCTTAAAGACACACATTGAGGAAAGCCGTCACTTGTGATTCTAGCACTTGAAAG
GTGGCAGGAGGAAGATCAGGGGTTTAAGAGCACCGTGCACAGCTACATACTGTATTCAAGGCCA
GCCCAGGATACAGTCTCAAGCAAGCAAACAACCATCTAGTGAAATAAGAAAATGGTGACATAAA
TCAGCAGGGAAAGACCCCTGCTGCCAAACTTGGGTTTGATTCCTAGGACCCACATGGTAGAGGG
AAAGAACCAATGCCCAAAAGTTGCCTTCTGGCCTTCACACAAAATATTTGGCAGTGTATGCTTA
CACATGCAAGTGTGTACACACACATACAATCATAATTTAAAAATATGTATTCCTCCATACTTCC
TTCACATGGCGAGGAGGACCTTTGTTGTTGTTTTTTTTTTTTTTCCTTAATGTGACCAAGATAT
CTTGGATTTTGAGTCTTGATTTTATTCTTTTAAGTGTATTATTTTCCACATGTTTTGAATAACA
AGGTATTGATTCTTGTATAAGATTATTAAATACATATGCTGACCTAA

hide sequence

RefSeq Acc Id:

XM_017600604 ⟹ XP_017456093

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,587,001 - 40,654,517 (-)	NCBI
mRatBN7.2	17	40,162,512 - 40,226,658 (-)	NCBI
Rnor_6.0	17	42,163,245 - 42,226,724 (-)	NCBI

Sequence:

show sequence

CCTTGATTTGAAAGCAGCACTTATAATCAAGTAGATAAATTATGAGGGTGGAAGGGGTGTCATG
CAAAAGGCTTGGCTGAAAACAAGACTTGAATAGTCAGGTGACTTGACTGAGTAGTCTGAGGCAA
GCAGTGCTTGCTATCGGGTGGAGCATTTTTCTAGGAGACCTGTCCATCCTTTCACCAGTTTAGA
ACCATGGCAGGAAAGAGGTGGGCCAGGGACCAGAGCAAGGAAACAAATGGAGGCCCCTCTGTTT
AGTGGGGCAGTGCGGGCTGCGGCACAGGCCATCCCTAGGGGCGTGTATGCGCGTGCGTATGCGT
CGCCCTGGTAACCCGGGAGGCAGAAAGGCGCTGAATCACCAGCACCCGCTGGCAGCATCTGTGC
AGCCTCAGGGGTGGGCAGGTGTCGCCTGCAGGTGTGCCTCGCAGGTGGCCCGACCGGACCTCAG
CTACTGGGCAGTCTGGAGCAGCACGGAGCCTGGAGATCGCTGGGAATGGAGGAATGGCACAGAT
TTATCGGGATGATAAAGCTGGAATCACTAGTCATCATTCTCAACACCTTTTGTTCTCCTAATTG
TATGAAGGGAGAAAGCAAGCGCGATCATATTCATGCTCATCTTTGCTGCTGGCTTTATCGAACA
TTTGCAGTTCTAGAAGGCTACATCTGACTGGCTCATCAACCATCAAAGAGAGTCTTTCTAAATC
CACTGCCTTGGAAGCCTCATCCTGTGTGAGGCAGAATGGTGTCCCCACCAGGAGTACTGTCTTC
CTTGCTGCTGCTGGCAGCCATGGCAGGTGGCAGCTCTCAGCAGTGCTCTGAGGGCAGGACTTAC
TCCGACGCCATCATTTCACCTAACCTGGAAAGCATTAGAATCATGCGGGTGTCTCACACCTTCT
CTGTGGGAGACTGTACAGCAGCTTGCTGTGACTTGCCCAGCTGTGACCTGGCCTGGTGGTTTGA
GGGCAGCTGCTATCTGGTGAACTGCATGCGCCCGGAGAACTGCGAGCCCAGGACCACAGGCCCC
ATCCGATCTTACCTCACTTTCGTGCGCAGACCTGTCCAGAGGTCTGGGCAGCTGCTGGACTATG
GAGACATGATGCTAGGCAGGGGCTCCCCTTCAGGAGCTTGGGGAGACTCCCTTGAGGACCTCAG
GAAGGACTTGCCCTTTCTAGGCAAAGATGGGGGGCCAGAGGAGACTGCTGAGTACTCGGATGAT
TACAAGGAACTGGAGCGGGGCCTCCTGCAACCCTCCAACCAACAAGACCCCAGAGGCAGCGCAG
AGTACCCCGACTGGAGCCTGCTGCCCAGCAGTGATGGAGATTTCAATGCTTCAGCTACGGGAGA
CAACTCAGCTGCTTCCACAGAGAAGCTGCAGGACCTCACGCCCTACCCACTGGACCAGGAGCAG
CTGCAGTCCCTGAATGAGTCAACTTGGTCCCCTACACCCAGACACTCTGAAATGAGCAGTATGT
GGCCTTCCTCTGTGACTGCATCACCTACAGAAGAGGGACTGGAGGGAGAAGAGACTTTACAGCT
CCAAGAGCAACCAAACAATAGTTCTGGAAAAAAGGTTCCAATGCCTTCCCATAATCCTTCCCCT
GCCAGCCTGGAGTCTAGCCCAACCACGGTGGAAAAGAGCTCCATTTTTACAGTCACTCCATGGA
GCAGAGATCCTGGCACCCCAACATTTCCTGCCAGTACAGTCCTCCCTGGGCTGATCTCACCTTC
GTGGCCCTTGTCACCTACCACTTCCAGGACAGTAAAGGCTCTTGCTGTGTCTGCTGGAGATAAC
TTAGTACTAACCTTACCCAATGGAGAAGCAGAACTGAAGGCCTCTGTTGAGCCAGCGCCCCCTG
CAGACACAGCTTACACCTATGAATGGAGTTTAATGAGCCATCCTGTAGACTTCCAAGGTAAAAT
CAAACAAGAAAACAAGCCGACTCTTCACCTTTCTCAGTTGTCTGTGGGTCTCTATGCCTTCAGA
GTGGCTGTTTCTGGTGAGAATGCATTTGGAGAAGGATATGTCAATGTCACAGTTATGCCAGCTG
CAAGAATCAATCAGCCACCTGTAGCTATTGTTTCTCCCCAGATACAAGAGCTCAGTTTGCCTTT
GACCTCAGCCCTGATTGACGGCAGCCAAAGTACAGATGATGCTGAAATTGTGAGTTACCACTGG
GAAGAAGTCGACGGGCCCTTCCTAGGAGAGGCCTTTCTGGACGATTCCCCACTCTTACGATTGT
CGAATCTAGATCCTGGTAACTACACTTTTAGGTTGACCATCACAGACTCAGATGGCGCTACTAA
CTCCACCACTGCAGCCCTCATCATCCGTGGTTCTTTGGACTACCCACCTGTTGCCAATGCAGGA
CCAAATCAGACCATCACTTTGCCCCAAAACACCATCATACTGAACGGGAACCAGAGCAGTGATG
ATCACCAGATTGTCCTCTATGAGTGGTTCCCAGACCCTGGTGGTGAGAGCAAGGAGATGGTCAT
GCAGGGAGCACAGACCCCATACCTCCACTTGTCTGAGCTGCAGGAAGGAGAGTACACGTTCCAA
CTGATGGTGACGGATTCCTCAGGACAGCAATCCACTGCTTTGGTCACTCTGACTGTCCAGGCTG
AAAACAACCAGGCTCCGGTGGCTGTGGCAGGCCCTGATAAGGAGCTGGTTTTCCCAGTGCAGAG
TGCTATGCTGGATGGGAGCAGGAGCAGTGATGATCACGGCATTGTCTGCTACCGCTGGGAGCAC
ATCAGAGGCCCCAGTGCAGTGGAGATGGAGAATGTGGACAAAGCCATAGCCACTGTCACCGGGC
TTCAGGTGGGTACCTACCACTTCCGGCTAACTGTGAGAGACCAGCAGGGTCTGAGCAGCACATC
CACCCTCACTGTGGCTGTGAAGAAGGAAAATAATAGTCCTCCCAGAGCCCAGGCTGGTGGCAGA
CATGTTCTTATGCTTCCCAATAATTCCATTACTTTGGACGGTTCAAGGTCTACTGATGACCGAG
GAATTGTGTCCTATCTATGGATCCGGGATGGCCAGAGTCCAGCTGCTGGAGATATCATTGGAAG
CTCTGACAACGGGGCGGCTCTGCAGCTCACCAATCTGGTGGAAGGAGTCTACACTTTTCACTTG
CTGGTCACTGACAGTCAGGGGGCCTCCGACTCAGACACTGCCATTGTGGAGGTGCTGCCAGACC
CCAAGAAGGATGGCATGGTGGAGTTGATCCTGCAGGTTGGTGTTGAGCAGCTGACAGAGCAGCA
GAAGGAAACTCTAGTGAGGCAACTGGCTGTGCTTCTGAATGTGCTAGACTCAGACGTGAAAGTG
TTGAAGATCCAGGCTCACACGGATGTCAGCACTGTGATTGTATTTTATGTACAGAGTGGGTCAC
CTTTCAAGGTTCTCAGAGCTGCTGACGTGGCCAGGAATCTGCACAAGCGGCTTTCCAAGGAGAA
GGGGGCTTTCCTGCTTTTCAAGGTCTTGAGGATAGACACAGCAGGATGCCTTCTCAAGTGTTCA
GGCCATGGTCACTGTGACCCCATCACAAAGCGTTGCATTTGCTCCCAGCTGTGGATGGAGAACC
TCCTACAGCGGTACATGTGGGATGGCGAGAGCAACTGTGAGTGGAGTGTATTCTACGTGGCAGC
TCTGGCGTTGACCCTAACAGTGCTAACTGGAGCTGTGACTTGGGTGTGCATCTGCTGTTGCAGG
AGACGAAAAAGGACTAAGATAAGGAAGAAAACAAAGTACACCATCCTAGACAACATGGATGAAC
AGGAAAGAATGGAACTGAGGCCCAAATACGGTATCAAGCACAGGAGCACCGAGCACAACTCCAG
TCTGATGGTGTCGGAGTCTGAGTTTGAAAGCGACCAGGACACACTATTCAGCCAAGAAAGGATG
GAGAGAGGAGTTCTGAAGGGTTCCCTGAATGGCTCTGCTAGAAGTGGAGTTTCCTTTGGTTATT
ACTCAAAGGACAGATAACAGGATGTTGTGGAAGGACCTCACGAGCTTGTGACTCAGTACCGGAT
GCTGGGAGTTATCACAAAGCTGACTCCTGCTTGGCACAGTGCATTGGCACCTCTCTCCAGGGGC
CTTGCTCTGTGCTCCACAGAGTGATTCAAAGACCCAGGTTTTTGGAACTTTCAAGACACAAAAC
AAAATCCTGCTTATTCAACTGATGCTCATCAATAGAGAAAAGGGGTGCATAAAACCTCTGCGGA
GTCGACTGAAAAGTTTTGTGTCTCCGTAGCGAACACTTTATTATAGTTATTGTCCATGATGAAA
TTAGGCTAACACCCGTTTCTATTTCTAGCCCACAGGAAAGACAAGTTAAGAAGGGTTGATTCTC
TATAGAAGCTGTGACTGCCTTTAAGAACCTTCCAGAAGCAGCTTCTCAGAGGCCCTGCAGGATC
AATGTGTAGTTCATCTGCGAGGGAGGAACCATCTGTGTGTAGCTTCCTGTCTGTGATGCAGCTA
GGTGTGGCTAGCTAGAAGGTCAGGAACTAAGGAAGCAGCAGAATCTAAGGACAGCAGGCAATAG
AGATGGGGAGGGGCGAATGACCTGCAGGTTAAGTGTTGAAGGTAGCCTTTAACATTTTTCTCAT
TCACTTTCTCTAAGAAAAAGAAACCACGACTGCTTATTATTGTAACTTTTATTGAGAACACTGT
GTAGCACTTCCATGGAAAGCAGGGAGGACTGGGTGATCACAGACATATTCCCAAACTTTAAAAT
ATACTCCTAATGAGGGGACTGTGGTCACCATGTTCTGAGCCCCTACAAAGACTTCCTAGTGAAA
TAACTGGACAGAACATTCACCATTTATGCTTAAAAACTTATTTAAGGGACTGGAGAAATGGCTA
TATATAAGACCTCATGGCTCTTGCAGAAGACCTTGGTTCAGTCACCCTTACAATTGTCCAGAAC
TCCACTTTCTGGTCTCTGGCAGCAGCAGCAGCATGAGGAATGTGCAGAGTTCATGCATGTAGTT
CATACATGAGCATTAAAAAAATCTTAAAAACATGTTTAAAAATCAAAGAACTAAATTTTATATT
AGTTCTTTACACAAAAAAGATTTATACAATGTCCCCCGAAAAAGCTCCCGCTCTCCCCCCTCAG
CCATGAACTGGAGATGATTACAGCCTGAGATGTTGATCAGGTTATAGTAGTTGCCCATGGCCCC
GAGACTGCTGGCCTTGGCAATGCCCTTGGCGTTTAGAGAGTGGAAGAGCAGTACGTACGGTAGT
CTGAGCTTAGAGAAAGAGAGTAGAGTGTAGCAGGAATTCAGTGCTAGCCTTGGCCATACAACAG
GTTTGAGGGCAACCTGGACTATATGAGATCCTATGTTAAAAAATGAAAAAAGGAAAAGGTAAAA
GAATTAGAATCACAATTTAAATTTTAGTAATAGAATTTTCTATTTCTGAGCTGAAAACTCAAAA
AACCAAAAATTCAGAGGCCCCAGTGTATTATACTTTACTGGCGAATTGATCAAATAAAAACGTG
TAGGAATATACTTTTATTTTAAAAGTAATATCTTTATGTCTATATATCATAGTTCAATATTATC
TATAATGTTAGAGGAACAGTGATTTTTTTTTTATTTTAGCACTAGTATTTAGCTTCATAAGCAG
AATCTTCCCTATCCAATGACCAGACTGAGGCTAGTTTAGTGGGTAACCGGACGTTTCTGGCACA
GAGAATCCAATAAAGCATCAAGCTGAAGCCTGTGAACCCTGCTGCTTTATGTGCACGAGTGTGC
ATCACTCATAGTTGACCTTCCCAAGTAATCCTGAAAGAAAACATTCCTCTGTGTTAGGCACCCA
CCGCAGGTCCAGGGAGCATAAGTGATTTCCACAGGGATGGAGTCAGTAGATCTGGGAATCGAGT
GCTAAGGCCTACTTTACAGTGCATGAAGAAGTCCAGACATGTTGGAGGGCAAGTCTTGGAGAAC
CTTCTAGACCCCTGAAAGTTCTGTTGCTGGGATGAAGAGGAAAGCTTTGAGTGTGCCTGAGAGC
AAAAGACAAGTAGGGGACCATGGACCTGGTGTCTCCCACAGGATCCAGCACACTCTAAGCCACC
CATCCTCTAGGTTTGTAGTGGGCTTGCTGGTTCTGTCCCTGGCTGTCTCAGCCTGGTCTCTCTG
ATCTATTCATCACAAAAGAACCTTGAGTCTATAGTGAATCAGAAATAAACATCACAGTGGTTAC
TGGAAAATGGATCCTGTCTTGTGACCCACTTGTTCTCGGGGACTGAAAAGGGGGTAAGCCCTCA
GCATCCATCTGGTGCTATCTTGAGACCTGAAGACTCTAAGCTGTTGACAAAGAGAGAAAAACAT
GTCTCTAGAGCAGCGATTCTGCGACCCTTTAATACAGCTCCTCATGTTGTGATCCACACTGCAA
ATTATTGCTTCCTCATAACTGTAATTTTGCTACTGTTTTGAATCGTATTGCAAATACCTGCTCT
CTGACTCCTCTGGAGGTTGCAGCCCATGGGCTGAGAAACTGCCGTGGAGGGTGGGAGAACATTT
ATAGGGTTCAGAGGCTGAGAGCACAGCTACTTTCTGATTTAGACAAAGATCAAATGCCAGCATT
CCCCAACCGAGTATGTTTAAAACACCTTAAAGACACACATTGAGGAAAGCCGTCACTTGTGATT
CTAGCACTTGAAAGGTGGCAGGAGGAAGATCAGGGGTTTAAGAGCACCGTGCACAGCTACATAC
TGTATTCAAGGCCAGCCCAGGATACAGTCTCAAGCAAGCAAACAACCATCTAGTGAAATAAGAA
AATGGTGACATAAATCAGCAGGGAAAGACCCCTGCTGCCAAACTTGGGTTTGATTCCTAGGACC
CACATGGTAGAGGGAAAGAACCAATGCCCAAAAGTTGCCTTCTGGCCTTCACACAAAATATTTG
GCAGTGTATGCTTACACATGCAAGTGTGTACACACACATACAATCATAATTTAAAAATATGTAT
TCCTCCATACTTCCTTCACATGGCGAGGAGGACCTTTGTTGTTGTTTTTTTTTTTTTTCCTTAA
TGTGACCAAGATATCTTGGATTTTGAGTCTTGATTTTATTCTTTTAAGTGTATTATTTTCCACA
TGTTTTGAATAACAAGGTATTGATTCTTGTATAAGATTATTAAATACATATGCTGACCTAA

hide sequence

RefSeq Acc Id:

XM_063276602 ⟹ XP_063132672

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,587,001 - 40,654,517 (-)	NCBI

RefSeq Acc Id:

XM_063276604 ⟹ XP_063132674

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,593,847 - 40,654,521 (-)	NCBI

RefSeq Acc Id:

XM_063276605 ⟹ XP_063132675

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,620,968 - 40,654,525 (-)	NCBI

RefSeq Acc Id:

XM_063276606 ⟹ XP_063132676

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,587,001 - 40,632,134 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001183952	(Get FASTA)	NCBI Sequence Viewer
	XP_006253998	(Get FASTA)	NCBI Sequence Viewer
	XP_017456093	(Get FASTA)	NCBI Sequence Viewer
	XP_063132672	(Get FASTA)	NCBI Sequence Viewer
	XP_063132674	(Get FASTA)	NCBI Sequence Viewer
	XP_063132675	(Get FASTA)	NCBI Sequence Viewer
	XP_063132676	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL86494	(Get FASTA)	NCBI Sequence Viewer
	EDL86495	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000024536
	ENSRNOP00000024536.6
	ENSRNOP00000108764
GenBank Protein	P0CI71	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001183952 ⟸ NM_001197023
- Peptide Label:	precursor
- UniProtKB:	P0CI71 (UniProtKB/Swiss-Prot), A0A8I5ZUN7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVSPPGVLSSLLLLAAMAGGSSQQCSEGRTYSDAIISPNLESIRIMRVSHTFSVGDCTAACCDL PSCDLAWWFEGSCYLVNCMRPENCEPRTTGPIRSYLTFVRRPVQRSGQLLDYGDMMLGRGSPSG AWGDSLEDLRKDLPFLGKDGGPEETAEYSDDYKELERGLLQPSNQQDPRGSAEYPDWSLLPSSD GDFNASATGDNSAASTEKLQDLTPYPLDQEQLQSLNESTWSPTPRHSEMSSMWPSSVTASPTEE GLEGEETLQLQEQPNNSSGKKVPMPSHNPSPASLESSPTTVEKSSIFTVTPWSRDPGTPTFPAS TVLPGLISPSWPLSPTTSRTVKALAVSAGDNLVLTLPNGEAELKASVEPAPPADTAYTYEWSLM SHPVDFQGKIKQENKPTLHLSQLSVGLYAFRVAVSGENAFGEGYVNVTVMPAARINQPPVAIVS PQIQELSLPLTSALIDGSQSTDDAEIVSYHWEEVDGPFLGEAFLDDSPLLRLSNLDPGNYTFRL TITDSDGATNSTTAALIIRGSLDYPPVANAGPNQTITLPQNTIILNGNQSSDDHQIVLYEWFPD PGGESKEMVMQGAQTPYLHLSELQEGEYTFQLMVTDSSGQQSTALVTLTVQAENNQAPVAVAGP DKELVFPVQSAMLDGSRSSDDHGIVCYRWEHIRGPSAVEMENVDKAIATVTGLQVGTYHFRLTV RDQQGLSSTSTLTVAVKKENNSPPRAQAGGRHVLMLPNNSITLDGSRSTDDRGIVSYLWIRDGQ SPAAGDIIGSSDNGAALQLTNLVEGVYTFHLLVTDSQGASDSDTAIVEVLPDPKKDGMVELILQ VGVEQLTEQQKETLVRQLAVLLNVLDSDVKVLKIQAHTDVSTVIVFYVQSGSPFKVLRAADVAR NLHKRLSKEKGAFLLFKVLRIDTAGCLLKCSGHGHCDPITKRCICSQLWMENLLQRYMWDGESN CEWSVFYVAALALTLTVLTGAVTWVCICCCRRRKRTKIRKKTKYTILDNMDEQERMELRPKYGI KHRSTEHNSSLMVSESEFESDQDTLFSQERMERGVLKGSLNGSARSGVSFGYYSKDR hide sequence

RefSeq Acc Id:	XP_006253998 ⟸ XM_006253936
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZUN7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVSPPGVLSSLLLLAAMAGGSSQQCSEGRTYSDAIISPNLESIRIMRVSHTFSVGDCTAACCDL PSCDLAWWFEGSCYLVNCMRPENCEPRTTGPIRSYLTFVRRPVQRSGQLLDYGDMMLGRGSPSG AWGDSLEDLRKDLPFLGKDGGPEETAEYSDDYKELERGLLQPSNQQDPRGSAEYPDWSLLPSSD GDFNASATGDNSAASTEKLQDLTPYPLDQEQLQSLNESTWSPTPRHSEMSSMWPSSVTASPTEE GLEGEETLQLQEQPNNSSGKKVPMPSHNPSPASLESSPTTVEKSSIFTVTPWSRDPGTPTFPAS TVLPGLISPSWPLSPTTSRTVKALAVSAGDNLVLTLPNGEAELKASVEPAPPADTAYTYEWSLM SHPVDFQGKIKQENKPTLHLSQLSVGLYAFRVAVSGENAFGEGYVNVTVMPAARINQPPVAIVS PQIQELSLPLTSALIDGSQSTDDAEIVSYHWEEVDGPFLGEAFLDDSPLLRLSNLDPGNYTFRL TITDSDGATNSTTAALIIRGSLDYPPVANAGPNQTITLPQNTIILNGNQSSDDHQIVLYEWFPD PGGESKEMVMQGAQTPYLHLSELQEGEYTFQLMVTDSSGQQSTALVTLTVQAENNQAPVAVAGP DKELVFPVQSAMLDGSRSSDDHGIVCYRWEHIRGPSAVEMENVDKAIATVTGLQVGTYHFRLTV RDQQGLSSTSTLTVAVKKENNSPPRAQAGGRHVLMLPNNSITLDGSRSTDDRGIVSYLWIRDGQ SPAAGDIIGSSDNGAALQLTNLVEGVYTFHLLVTDSQGASDSDTAIVEVLPDPKKDGMVELILQ VGVEQLTEQQKETLVRQLAVLLNVLDSDVKVLKIQAHTDVSTVIVFYVQSGSPFKVLRAADVAR NLHKRLSKEKGAFLLFKVLRIDTAEWSVFYVAALALTLTVLTGAVTWVCICCCRRRKRTKIRKK TKYTILDNMDEQERMELRPKYGIKHRSTEHNSSLMVSESEFESDQDTLFSQERMERGVLKGSLN GSARSGVSFGYYSKDR hide sequence

RefSeq Acc Id:	XP_017456093 ⟸ XM_017600604
- Peptide Label:	isoform X1
- UniProtKB:	P0CI71 (UniProtKB/Swiss-Prot), A0A8I5ZUN7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVSPPGVLSSLLLLAAMAGGSSQQCSEGRTYSDAIISPNLESIRIMRVSHTFSVGDCTAACCDL PSCDLAWWFEGSCYLVNCMRPENCEPRTTGPIRSYLTFVRRPVQRSGQLLDYGDMMLGRGSPSG AWGDSLEDLRKDLPFLGKDGGPEETAEYSDDYKELERGLLQPSNQQDPRGSAEYPDWSLLPSSD GDFNASATGDNSAASTEKLQDLTPYPLDQEQLQSLNESTWSPTPRHSEMSSMWPSSVTASPTEE GLEGEETLQLQEQPNNSSGKKVPMPSHNPSPASLESSPTTVEKSSIFTVTPWSRDPGTPTFPAS TVLPGLISPSWPLSPTTSRTVKALAVSAGDNLVLTLPNGEAELKASVEPAPPADTAYTYEWSLM SHPVDFQGKIKQENKPTLHLSQLSVGLYAFRVAVSGENAFGEGYVNVTVMPAARINQPPVAIVS PQIQELSLPLTSALIDGSQSTDDAEIVSYHWEEVDGPFLGEAFLDDSPLLRLSNLDPGNYTFRL TITDSDGATNSTTAALIIRGSLDYPPVANAGPNQTITLPQNTIILNGNQSSDDHQIVLYEWFPD PGGESKEMVMQGAQTPYLHLSELQEGEYTFQLMVTDSSGQQSTALVTLTVQAENNQAPVAVAGP DKELVFPVQSAMLDGSRSSDDHGIVCYRWEHIRGPSAVEMENVDKAIATVTGLQVGTYHFRLTV RDQQGLSSTSTLTVAVKKENNSPPRAQAGGRHVLMLPNNSITLDGSRSTDDRGIVSYLWIRDGQ SPAAGDIIGSSDNGAALQLTNLVEGVYTFHLLVTDSQGASDSDTAIVEVLPDPKKDGMVELILQ VGVEQLTEQQKETLVRQLAVLLNVLDSDVKVLKIQAHTDVSTVIVFYVQSGSPFKVLRAADVAR NLHKRLSKEKGAFLLFKVLRIDTAGCLLKCSGHGHCDPITKRCICSQLWMENLLQRYMWDGESN CEWSVFYVAALALTLTVLTGAVTWVCICCCRRRKRTKIRKKTKYTILDNMDEQERMELRPKYGI KHRSTEHNSSLMVSESEFESDQDTLFSQERMERGVLKGSLNGSARSGVSFGYYSKDR hide sequence

Ensembl Acc Id:

ENSRNOP00000024536 ⟸ ENSRNOT00000024536

Ensembl Acc Id:

ENSRNOP00000082823 ⟸ ENSRNOT00000115483

RefSeq Acc Id:	XP_063132672 ⟸ XM_063276602
- Peptide Label:	isoform X1
- UniProtKB:	P0CI71 (UniProtKB/Swiss-Prot), A0A8I5ZUN7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132676 ⟸ XM_063276606
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063132674 ⟸ XM_063276604
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZUN7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132675 ⟸ XM_063276605
- Peptide Label:	isoform X4
- UniProtKB:	A6KLE9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000108764 ⟸ ENSRNOT00000123476

Protein Domains

MANSC PKD

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P0CI71-F1-model_v2	AlphaFold	P0CI71	1-1081	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307443	AgrOrtholog
BioCyc Gene	G2FUF-9425	BioCyc
Ensembl Genes	ENSRNOG00000018141	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000024536	ENTREZGENE
	ENSRNOT00000024536.7	UniProtKB/Swiss-Prot
	ENSRNOT00000123476	ENTREZGENE
Gene3D-CATH	2.60.40.10	UniProtKB/Swiss-Prot
InterPro	Ig-like_fold	UniProtKB/Swiss-Prot
	KIAA0319-like	UniProtKB/Swiss-Prot
	KIAA0319-like_C	UniProtKB/Swiss-Prot
	MANSC_dom	UniProtKB/Swiss-Prot
	MANSC_N	UniProtKB/Swiss-Prot
	PKD/Chitinase_dom	UniProtKB/Swiss-Prot
	PKD_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:361244	UniProtKB/Swiss-Prot
NCBI Gene	361244	ENTREZGENE
PANTHER	DYSLEXIA-ASSOCIATED PROTEIN KIAA0319	UniProtKB/Swiss-Prot
	PTHR46182	UniProtKB/Swiss-Prot
Pfam	K319L-like_PKD	UniProtKB/Swiss-Prot
	KIAA0319	UniProtKB/Swiss-Prot
	KIAA0319_N	UniProtKB/Swiss-Prot
PhenoGen	Kiaa0319	PhenoGen
PROSITE	MANSC	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000018141	RatGTEx
SMART	MANEC	UniProtKB/Swiss-Prot
	PKD	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF49299	UniProtKB/Swiss-Prot
UniProt	A0A8I5ZUN7	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LDF5_RAT	UniProtKB/TrEMBL
	A6KLE9	ENTREZGENE, UniProtKB/TrEMBL
	K0319_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-09-19	Kiaa0319	KIAA0319 homolog	RGD1307443	similar to mKIAA0319 protein	Symbol and Name Changed	1299863	APPROVED
2008-04-30	RGD1307443	similar to mKIAA0319 protein	RGD1307443_predicted	similar to mKIAA0319 protein (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1307443_predicted	similar to mKIAA0319 protein (predicted)	LOC361244_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC361244_predicted	similar to mKIAA0319 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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