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Gene: Tarbp2 (Tarbp2 subunit of RISC loading complex) Rattus norvegicus

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Symbol:

Tarbp2

Name:

Tarbp2 subunit of RISC loading complex

RGD ID:

1307375

Description:

Predicted to enable several functions, including RNA binding activity; protein homodimerization activity; and protein sequestering activity. Predicted to contribute to pre-miRNA binding activity. Predicted to be involved in several processes, including positive regulation of viral genome replication; regulation of defense response; and regulation of gene expression. Predicted to act upstream of or within several processes, including cytoplasmic pattern recognition receptor signaling pathway; protein K63-linked ubiquitination; and regulation of gene expression. Predicted to be located in perinuclear region of cytoplasm. Predicted to be part of RISC complex and RISC-loading complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human TARBP2 (TARBP2 subunit of RISC loading complex); PARTICIPATES IN microRNA pathway; INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC363006; MGC124970; RISC-loading complex subunit TARBP2; TAR (HIV) RNA binding protein 2; TAR (HIV-1) RNA binding protein 2; TARBP2, RISC loading complex RNA binding subunit

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TARBP2 (TARBP2 subunit of RISC loading complex)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):	Tarbp2 (TARBP2, RISC loading complex RNA binding subunit)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tarbp2 (TARBP2 subunit of RISC loading complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TARBP2 (TARBP2 subunit of RISC loading complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TARBP2 (TARBP2 subunit of RISC loading complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tarbp2 (TARBP2 subunit of RISC loading complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TARBP2 (TARBP2 subunit of RISC loading complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TARBP2 (TARBP2 subunit of RISC loading complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tarbp2 (TARBP2 subunit of RISC loading complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TARBP2 (TARBP2 subunit of RISC loading complex)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tarbp2 (TARBP2, RISC loading complex RNA binding subunit)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tarbp2 (TAR (HIV) RNA binding protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	loqs	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rde-4	Alliance	DIOPT (OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	tarbp2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	135,527,710 - 135,532,826 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	135,527,589 - 135,533,323 (+)	Ensembl				GRCr8
mRatBN7.2	7	133,649,118 - 133,654,306 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	133,649,090 - 133,654,314 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	135,404,936 - 135,410,051 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	137,634,303 - 137,639,418 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	137,620,556 - 137,625,671 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	144,121,688 - 144,126,860 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	144,121,744 - 144,126,857 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	141,912,728 - 141,918,855 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	141,272,043 - 141,273,188 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	130,076,808 - 130,081,909 (+)	NCBI		Celera
RGSC_v3.1	7	141,348,156 - 141,349,625 (+)	NCBI
Cytogenetic Map	7	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Microsatellite Instability (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (ISO)

17beta-estradiol (EXP)

17beta-estradiol 3-benzoate (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-trinitrotoluene (EXP)

2,4-dinitrotoluene (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

4-amino-2,6-dinitrotoluene (EXP)

aflatoxin B1 (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

caffeine (ISO)

cannabidiol (ISO)

chlordecone (ISO)

cocaine (EXP)

coumarin (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

diclofenac (ISO)

dioxygen (ISO)

diquat (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

FR900359 (ISO)

ibuprofen (ISO)

indometacin (ISO)

ivermectin (ISO)

Mesaconitine (EXP)

methamphetamine (ISO)

methylseleninic acid (ISO)

oxaliplatin (EXP)

pirinixic acid (ISO)

rotenone (ISO)

selenium atom (ISO)

sodium arsenite (EXP)

Soman (EXP)

thiram (ISO)

titanium dioxide (ISO)

topotecan (EXP)

triptonide (ISO)

valproic acid (ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

global gene silencing by mRNA cleavage (IEA,ISO,ISS)

miRNA processing (IEA,ISO)

multicellular organism growth (ISO)

negative regulation of cytoplasmic pattern recognition receptor signaling pathway (IEA,ISO)

negative regulation of defense response to virus by host (IEA,ISO,ISS)

neural precursor cell proliferation (ISO)

positive regulation of muscle cell differentiation (ISO)

positive regulation of translation (ISO)

positive regulation of viral genome replication (IEA,ISO,ISS)

post-transcriptional regulation of gene expression (IEA)

pre-miRNA processing (IEA,ISO,ISS)

regulation of gene expression (IEA)

regulation of miRNA processing (IEA,ISO)

regulation of primary metabolic process (IEA)

regulation of protein metabolic process (IEA)

regulation of regulatory ncRNA processing (IBA)

regulation of siRNA processing (IEA)

regulation of translation (IEA)

regulation of viral transcription (IEA,ISO,ISS)

regulatory ncRNA-mediated gene silencing (IEA)

RISC complex assembly (IEA,ISO)

single fertilization (ISO)

siRNA processing (IBA,IEA,ISO,ISS)

skeletal muscle tissue regeneration (ISO)

spermatid development (ISO)

Cellular Component

cytoplasm (IBA,IEA,ISO,ISS)

nucleoplasm (IEA,ISO)

nucleus (IBA,IEA)

perinuclear region of cytoplasm (IEA)

RISC complex (IBA,IEA,ISO,ISS)

RISC-loading complex (IBA,IEA,ISO,ISS)

Molecular Function

double-stranded RNA binding (IBA,IEA,ISO)

enzyme binding (IEA,ISO)

identical protein binding (IEA,ISO)

miRNA binding (IEA)

pre-miRNA binding (IEA,ISO)

protein binding (ISO)

protein homodimerization activity (IEA,ISO)

protein sequestering activity (IEA,ISO)

RNA binding (IEA)

siRNA binding (IBA,IEA,ISO,ISS)

Molecular Pathway Annotations Click to see Annotation Detail View

microRNA pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	The widespread regulation of microRNA biogenesis, function and decay.	Krol J, etal., Nat Rev Genet. 2010 Sep;11(9):597-610. Epub 2010 Jul 27.
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:10369260	PMID:11641396	PMID:12477932	PMID:15973356	PMID:16357216	PMID:16424907	PMID:17452327	PMID:17531811	PMID:18178619	PMID:19820710	PMID:22503104	PMID:23435228
PMID:23661684	PMID:25416956	PMID:25557550	PMID:25608000	PMID:27159388	PMID:28174252

Genomics

Comparative Map Data

Tarbp2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	135,527,710 - 135,532,826 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	135,527,589 - 135,533,323 (+)	Ensembl				GRCr8
mRatBN7.2	7	133,649,118 - 133,654,306 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	133,649,090 - 133,654,314 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	135,404,936 - 135,410,051 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	137,634,303 - 137,639,418 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	137,620,556 - 137,625,671 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	144,121,688 - 144,126,860 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	144,121,744 - 144,126,857 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	141,912,728 - 141,918,855 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	141,272,043 - 141,273,188 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	130,076,808 - 130,081,909 (+)	NCBI		Celera
RGSC_v3.1	7	141,348,156 - 141,349,625 (+)	NCBI
Cytogenetic Map	7	q36	NCBI

TARBP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	53,500,923 - 53,506,431 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	53,500,921 - 53,506,431 (+)	Ensembl			hg38	GRCh38
GRCh37	12	53,894,707 - 53,900,215 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	52,180,972 - 52,186,482 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	12	52,180,971 - 52,186,480	NCBI
Celera	12	53,545,063 - 53,550,573 (+)	NCBI		Celera
Cytogenetic Map	12	q13.13	NCBI
HuRef	12	50,934,287 - 50,939,797 (+)	NCBI		HuRef
CHM1_1	12	53,861,761 - 53,867,271 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	53,466,928 - 53,472,436 (+)	NCBI		T2T-CHM13v2.0

Tarbp2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	102,423,327 - 102,432,112 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	102,426,627 - 102,432,111 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm39 Ensembl	15	102,419,768 - 102,426,523 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	102,516,077 - 102,523,676 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	102,518,192 - 102,523,676 (+)	Ensembl			mm10	GRCm38
MGSCv37	15	102,348,677 - 102,354,107 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	102,346,493 - 102,351,708 (+)	NCBI		MGSCv36	mm8
Celera	15	104,676,011 - 104,681,441 (+)	NCBI		Celera
Cytogenetic Map	15	F3	NCBI
cM Map	15	57.65	NCBI

Tarbp2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	793,759 - 798,806 (+)	Ensembl
ChiLan1.0	NW_004955458	793,753 - 798,755 (+)	NCBI	ChiLan1.0	ChiLan1.0

TARBP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	40,678,185 - 40,683,408 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	40,674,949 - 40,681,391 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	35,246,937 - 35,253,378 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	36,031,822 - 36,038,080 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	36,031,818 - 36,038,008 (-)	Ensembl			panPan2	panpan1.1

TARBP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	1,715,157 - 1,720,050 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	1,715,158 - 1,726,885 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	44,530,279 - 44,535,121 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	1,719,078 - 1,723,920 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	1,719,077 - 1,723,754 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	1,736,610 - 1,741,453 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	1,719,877 - 1,724,720 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	44,931,979 - 44,936,821 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tarbp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	62,384,789 - 62,390,032 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936512	10,774,213 - 10,796,268 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936512	10,774,793 - 10,780,041 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TARBP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	18,718,688 - 18,723,839 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	18,718,588 - 18,723,843 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	19,154,223 - 19,159,472 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TARBP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	49,601,634 - 49,607,097 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	49,602,113 - 49,606,816 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	196,446,953 - 196,453,171 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tarbp2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624904	1,597,428 - 1,603,504 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624904	1,598,422 - 1,603,494 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	71
Count of miRNA genes:	53
Interacting mature miRNAs:	68
Transcripts:	ENSRNOT00000064661
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354582	Stl11	Serum triglyceride level QTL 11	3.42		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	121393075	137014596	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	132099939	137014596	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	98549867	137014596	Rat
1300112	Bp183	Blood pressure QTL 183	3.51		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	119280025	135560836	Rat
61428	Scl3	Serum cholesterol level QTL 3	3.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	100548246	137014596	Rat
61397	Bw17	Body weight QTL 17	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	7	95485047	137014596	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	115313999	136544683	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	92362341	137014596	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	71827901	136544683	Rat
1357339	Stl14	Serum triglyceride level QTL 14	3.45	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	135371291	137014596	Rat

Markers in Region

RH134482

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,654,086 - 133,654,303 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,126,641 - 144,126,857	NCBI	Rnor6.0
Rnor_5.0	7	141,918,636 - 141,918,852	UniSTS	Rnor5.0
Celera	7	130,081,690 - 130,081,906	UniSTS
RH 3.4 Map	7	1051.41	UniSTS
Cytogenetic Map	7	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001034941	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079657	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079660	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC109743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC104690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000064661 ⟹ ENSRNOP00000061329

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,527,589 - 135,532,921 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,649,090 - 133,654,296 (+)	Ensembl
Rnor_6.0 Ensembl	7	144,121,744 - 144,126,857 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103193 ⟹ ENSRNOP00000095105

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,527,589 - 135,533,323 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,649,090 - 133,654,314 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107019 ⟹ ENSRNOP00000076381

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,527,589 - 135,532,823 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,649,090 - 133,654,296 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118634 ⟹ ENSRNOP00000079010

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,527,622 - 135,532,823 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,649,198 - 133,654,306 (+)	Ensembl

RefSeq Acc Id:

NM_001034941 ⟹ NP_001030113

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,527,710 - 135,532,826 (+)	NCBI
mRatBN7.2	7	133,649,190 - 133,654,306 (+)	NCBI
Rnor_6.0	7	144,121,744 - 144,126,860 (+)	NCBI
Rnor_5.0	7	141,912,728 - 141,918,855 (+)	NCBI
RGSC_v3.4	7	141,272,043 - 141,273,188 (+)	RGD
Celera	7	130,076,808 - 130,081,909 (+)	RGD

Sequence:

show sequence

CCGGCCGCGACTCCGGGCTTGGCCCCGGCCCTAGCTCGTCGGCGGTGTACTGGGGTGCGTGGAG
ACTGTAGTCACGGTGGCGCCCGCGGGGACGGAGGAGGGAATGAGTGAAGAGGATCAGGGCTCCG
GCTCTACTACAGGCTGCGGGCTGCCCAGCATAGAGCAAATGCTGGCCGCCAACCCGGGCAAGAC
CCCGATCAGCCTTCTTCAGGAGTATGGGACCAGAATAGGGAAGACGCCCGTGTACGACCTTCTC
AAAGCCGAGGGCCAAGCCCATCAACCTAATTTCACCTTCCGGGTCACCGTTGGCGACACCAGCT
GCACTGGTCAGGGCCCCAGCAAGAAGGCAGCCAAGCACAAGGCAGCTGAGGTGGCCCTCAAACA
CCTCAAAGGGGGGAGCATGCTGGAACCAGCCCTGGAGGACAGCAGTTCTTTTTCTCTCCTAGAC
TCTTCAGTGCCTGAGGACACTGCTGTCATTGCTGCAGAAGCTGCTGCCCCTGTTCCATCTGCTT
TACTAACCAGGAGCCCTCCCATGGAGATGCAGCCCCCTGTCTCTCCTCAGCAGTCTGAGTGCAA
CCCTGTTGGTGCTCTGCAGGAGCTGGTGGTGCAGAAAGGCTGGCGTTTGCCAGAGTACATGGTG
ACCCAGGAGTCTGGGCCTGCTCACCGCAAAGAGTTCACCATGACCTGCCGGGTGGAGCGTTTCA
TTGAGATTGGCAGTGGGACCTCCAAGAAGCTGGCAAAGCGCAACGCGGCAGCTAAGATGCTGCT
TCGAGTGCACACGGTACCTCTGGATGCCCGCGACGGCAACGAGGCTGAACCTGATGACGATCAT
TTTTCCATTGGCGTGAGCTCCCGCCTGGATGGACTAAGGAACCGTGGGCCAGGCTGCACCTGGG
ATTCCTTACGGAATTCTGTGGGAGAAAAGATCCTGTCCCTTCGCAATTGCTCCGTGGGCTCTCT
GGGGTCTTTGGGCTCTGCCTGCTGCAGCATCCTCAGTGAGCTCTCTGCGGAGCAGGCTTTCCAT
GTCAGCTATCTGGATATTGAGGAACTGAGCCTGAGTGGGCTCTGCCAGTGTCTAGTGGAGCTGT
CCACGCAGCCAGCCACTGTGTGTTATGGTTCTGCCACTACCAGGGAGGCAGCCCGAGGTGATGC
TGCTCGCCGCGCACTACAGTACCTCAGGATCATGGCCGGTAGCAAATAGCACCCACTACAGTGA
TGGATATCTGTTACTTCTTGCTCCTTCTGCCCTGGGTCTATGCGTCTGCCTAGCTCTGGTGCCC
TCCAGAGGTGCCATCTCTACCTCTGACACAGCTTGCCTGCCTTGAGACTGAGGAAGGCAAAGGC
AAGCAAGGAGCCATGAACCACAGGGCCCCAGCCAGCGCAGGGTTTGCCCTCATTCCATGGATGA
TGAATGAAAGGAAATTGGAATTCTATTGGAATCCAGAATAAATGCTGCTCTTTGGCTTCTTAAA
AAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006242429 ⟹ XP_006242491

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,527,725 - 135,532,826 (+)	NCBI
mRatBN7.2	7	133,649,133 - 133,654,306 (+)	NCBI
Rnor_6.0	7	144,121,692 - 144,126,860 (+)	NCBI
Rnor_5.0	7	141,912,728 - 141,918,855 (+)	NCBI

Sequence:

show sequence

AGTCGGGTGGGCGGGGGACTCCAGATCCCAGCATGCCCCGCGGCGGGCCCTACCGGCCGCGACT
CCGGGCTTGGCCCCGGCCCTAGCTCGTCGGCGGTGTACTGGGGTGCGTGGAGACTGTAGTCACG
GTGGCGCCCGCGGGGACGGAGGAGGGAATGAGTGAAGAGGATCAGGGCTCCGGCTCTACTACAG
GCTGCGGGCTGCCCAGCATAGAGCAAATGCTGGCCGCCAACCCGGGCAAGACCCCGATCAGCCT
TCTTCAGGAGTATGGGACCAGAATAGGGAAGACGCCCGTGTACGACCTTCTCAAAGCCGAGGGC
CAAGCCCATCAACCTAATTTCACCTTCCGGGTCACCGTTGGCGACACCAGCTGCACTGACTCTT
CAGTGCCTGAGGACACTGCTGTCATTGCTGCAGAAGCTGCTGCCCCTGTTCCATCTGCTTTACT
AACCAGGAGCCCTCCCATGGAGATGCAGCCCCCTGTCTCTCCTCAGCAGTCTGAGTGCAACCCT
GTTGGTGCTCTGCAGGAGCTGGTGGTGCAGAAAGGCTGGCGTTTGCCAGAGTACATGGTGACCC
AGGAGTCTGGGCCTGCTCACCGCAAAGAGTTCACCATGACCTGCCGGGTGGAGCGTTTCATTGA
GATTGGCAGTGGGACCTCCAAGAAGCTGGCAAAGCGCAACGCGGCAGCTAAGATGCTGCTTCGA
GTGCACACGGTACCTCTGGATGCCCGCGACGGCAACGAGGCTGAACCTGATGACGATCATTTTT
CCATTGGCGTGAGCTCCCGCCTGGATGGACTAAGGAACCGTGGGCCAGGCTGCACCTGGGATTC
CTTACGGAATTCTGTGGGAGAAAAGATCCTGTCCCTTCGCAATTGCTCCGTGGGCTCTCTGGGG
TCTTTGGGCTCTGCCTGCTGCAGCATCCTCAGTGAGCTCTCTGCGGAGCAGGCTTTCCATGTCA
GCTATCTGGATATTGAGGAACTGAGCCTGAGTGGGCTCTGCCAGTGTCTAGTGGAGCTGTCCAC
GCAGCCAGCCACTGTGTGTTATGGTTCTGCCACTACCAGGGAGGCAGCCCGAGGTGATGCTGCT
CGCCGCGCACTACAGTACCTCAGGATCATGGCCGGTAGCAAATAGCACCCACTACAGTGATGGA
TATCTGTTACTTCTTGCTCCTTCTGCCCTGGGTCTATGCGTCTGCCTAGCTCTGGTGCCCTCCA
GAGGTGCCATCTCTACCTCTGACACAGCTTGCCTGCCTTGAGACTGAGGAAGGCAAAGGCAAGC
AAGGAGCCATGAACCACAGGGCCCCAGCCAGCGCAGGGTTTGCCCTCATTCCATGGATGATGAA
TGAAAGGAAATTGGAATTCTATTGGAATCCAGAATAAATGCTGCTCTTTGGCTTCTTAAA

hide sequence

RefSeq Acc Id:

XM_006242430 ⟹ XP_006242492

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,527,727 - 135,532,826 (+)	NCBI
mRatBN7.2	7	133,649,197 - 133,654,306 (+)	NCBI
Rnor_6.0	7	144,121,688 - 144,126,860 (+)	NCBI
Rnor_5.0	7	141,912,728 - 141,918,855 (+)	NCBI

Sequence:

show sequence

AAGGAGTCGGGTGGGCGGGGGACTCCAGATCCCAGCATGCCCCGCGGCGGGCCCTACCGGCCGC
GACTCCGGGCTTGGCCCCGGCCCTAGCTCGTCGGCGGTGTACTGGGGTGCGTGGAGACTGTAGT
CACGGTGGCGCCCGCGGGGACGGAGGAGGGAATGAGTGAAGAGGATCAGGGCTCCGGCTCTACT
ACAGGCTGCGGGCTGCCCAGTTCTTTTTCTCTCCTAGACTCTTCAGTGCCTGAGGACACTGCTG
TCATTGCTGCAGAAGCTGCTGCCCCTGTTCCATCTGCTTTACTAACCAGGAGCCCTCCCATGGA
GATGCAGCCCCCTGTCTCTCCTCAGCAGTCTGAGTGCAACCCTGTTGGTGCTCTGCAGGAGCTG
GTGGTGCAGAAAGGCTGGCGTTTGCCAGAGTACATGGTGACCCAGGAGTCTGGGCCTGCTCACC
GCAAAGAGTTCACCATGACCTGCCGGGTGGAGCGTTTCATTGAGATTGGCAGTGGGACCTCCAA
GAAGCTGGCAAAGCGCAACGCGGCAGCTAAGATGCTGCTTCGAGTGCACACGGTACCTCTGGAT
GCCCGCGACGGCAACGAGGCTGAACCTGATGACGATCATTTTTCCATTGGCGTGAGCTCCCGCC
TGGATGGACTAAGGAACCGTGGGCCAGGCTGCACCTGGGATTCCTTACGGAATTCTGTGGGAGA
AAAGATCCTGTCCCTTCGCAATTGCTCCGTGGGCTCTCTGGGGTCTTTGGGCTCTGCCTGCTGC
AGCATCCTCAGTGAGCTCTCTGCGGAGCAGGCTTTCCATGTCAGCTATCTGGATATTGAGGAAC
TGAGCCTGAGTGGGCTCTGCCAGTGTCTAGTGGAGCTGTCCACGCAGCCAGCCACTGTGTGTTA
TGGTTCTGCCACTACCAGGGAGGCAGCCCGAGGTGATGCTGCTCGCCGCGCACTACAGTACCTC
AGGATCATGGCCGGTAGCAAATAGCACCCACTACAGTGATGGATATCTGTTACTTCTTGCTCCT
TCTGCCCTGGGTCTATGCGTCTGCCTAGCTCTGGTGCCCTCCAGAGGTGCCATCTCTACCTCTG
ACACAGCTTGCCTGCCTTGAGACTGAGGAAGGCAAAGGCAAGCAAGGAGCCATGAACCACAGGG
CCCCAGCCAGCGCAGGGTTTGCCCTCATTCCATGGATGATGAATGAAAGGAAATTGGAATTCTA
TTGGAATCCAGAATAAATGCTGCTCTTTGGCTTCTTAAA

hide sequence

RefSeq Acc Id:

XM_039079657 ⟹ XP_038935585

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,527,729 - 135,532,826 (+)	NCBI
mRatBN7.2	7	133,649,120 - 133,654,306 (+)	NCBI

RefSeq Acc Id:

XM_039079660 ⟹ XP_038935588

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,528,499 - 135,532,826 (+)	NCBI
mRatBN7.2	7	133,649,537 - 133,654,306 (+)	NCBI

RefSeq Acc Id:

XM_039079661 ⟹ XP_038935589

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,527,851 - 135,532,826 (+)	NCBI
mRatBN7.2	7	133,649,196 - 133,654,306 (+)	NCBI

RefSeq Acc Id:

XM_039079665 ⟹ XP_038935593

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,527,726 - 135,532,826 (+)	NCBI
mRatBN7.2	7	133,649,195 - 133,654,306 (+)	NCBI

RefSeq Acc Id:

XM_063264005 ⟹ XP_063120075

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,529,714 - 135,532,826 (+)	NCBI

RefSeq Acc Id:

XM_063264007 ⟹ XP_063120077

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,528,521 - 135,532,826 (+)	NCBI

RefSeq Acc Id:

XM_063264008 ⟹ XP_063120078

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,527,725 - 135,531,781 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001030113	(Get FASTA)	NCBI Sequence Viewer
	XP_006242491	(Get FASTA)	NCBI Sequence Viewer
	XP_006242492	(Get FASTA)	NCBI Sequence Viewer
	XP_038935585	(Get FASTA)	NCBI Sequence Viewer
	XP_038935588	(Get FASTA)	NCBI Sequence Viewer
	XP_038935589	(Get FASTA)	NCBI Sequence Viewer
	XP_038935593	(Get FASTA)	NCBI Sequence Viewer
	XP_063120075	(Get FASTA)	NCBI Sequence Viewer
	XP_063120077	(Get FASTA)	NCBI Sequence Viewer
	XP_063120078	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI04691	(Get FASTA)	NCBI Sequence Viewer
	EDL86826	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000061329
	ENSRNOP00000061329.2
	ENSRNOP00000079010
GenBank Protein	Q3SWU0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001030113 ⟸ NM_001034941

- UniProtKB:

Q3SWU0 (UniProtKB/Swiss-Prot), A0A8I5Y6G0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSEEDQGSGSTTGCGLPSIEQMLAANPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTF
RVTVGDTSCTGQGPSKKAAKHKAAEVALKHLKGGSMLEPALEDSSSFSLLDSSVPEDTAVIAAE
AAAPVPSALLTRSPPMEMQPPVSPQQSECNPVGALQELVVQKGWRLPEYMVTQESGPAHRKEFT
MTCRVERFIEIGSGTSKKLAKRNAAAKMLLRVHTVPLDARDGNEAEPDDDHFSIGVSSRLDGLR
NRGPGCTWDSLRNSVGEKILSLRNCSVGSLGSLGSACCSILSELSAEQAFHVSYLDIEELSLSG
LCQCLVELSTQPATVCYGSATTREAARGDAARRALQYLRIMAGSK

hide sequence

RefSeq Acc Id:	XP_006242491 ⟸ XM_006242429
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5Y6G0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEEDQGSGSTTGCGLPSIEQMLAANPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTF RVTVGDTSCTDSSVPEDTAVIAAEAAAPVPSALLTRSPPMEMQPPVSPQQSECNPVGALQELVV QKGWRLPEYMVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKMLLRVHTVPLDAR DGNEAEPDDDHFSIGVSSRLDGLRNRGPGCTWDSLRNSVGEKILSLRNCSVGSLGSLGSACCSI LSELSAEQAFHVSYLDIEELSLSGLCQCLVELSTQPATVCYGSATTREAARGDAARRALQYLRI MAGSK hide sequence

RefSeq Acc Id:	XP_006242492 ⟸ XM_006242430
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZPX6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEEDQGSGSTTGCGLPSSFSLLDSSVPEDTAVIAAEAAAPVPSALLTRSPPMEMQPPVSPQQS ECNPVGALQELVVQKGWRLPEYMVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAK MLLRVHTVPLDARDGNEAEPDDDHFSIGVSSRLDGLRNRGPGCTWDSLRNSVGEKILSLRNCSV GSLGSLGSACCSILSELSAEQAFHVSYLDIEELSLSGLCQCLVELSTQPATVCYGSATTREAAR GDAARRALQYLRIMAGSK hide sequence

Ensembl Acc Id:

ENSRNOP00000061329 ⟸ ENSRNOT00000064661

RefSeq Acc Id:	XP_038935585 ⟸ XM_039079657
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038935593 ⟸ XM_039079665
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038935589 ⟸ XM_039079661
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038935588 ⟸ XM_039079660
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000076381 ⟸ ENSRNOT00000107019

Ensembl Acc Id:

ENSRNOP00000079010 ⟸ ENSRNOT00000118634

Ensembl Acc Id:

ENSRNOP00000095105 ⟸ ENSRNOT00000103193

RefSeq Acc Id:	XP_063120078 ⟸ XM_063264008
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063120077 ⟸ XM_063264007
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063120075 ⟸ XM_063264005
- Peptide Label:	isoform X4

Protein Domains

DRBM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q3SWU0-F1-model_v2	AlphaFold	Q3SWU0	1-365	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695703

Promoter ID:

EPDNEW_R6228

Type:

initiation region

Name:

Tarbp2_1

Description:

TARBP2, RISC loading complex RNA binding subunit

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	144,121,714 - 144,121,774	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307375	AgrOrtholog
BioCyc Gene	G2FUF-31932	BioCyc
Ensembl Genes	ENSRNOG00000042355	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000064661	ENTREZGENE
	ENSRNOT00000064661.3	UniProtKB/Swiss-Prot
	ENSRNOT00000118634	ENTREZGENE
Gene3D-CATH	3.30.160.20	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7107060	IMAGE-MGC_LOAD
InterPro	dsRBD_dom	UniProtKB/Swiss-Prot
	RLC_Component	UniProtKB/Swiss-Prot
	TRBP2	UniProtKB/Swiss-Prot
	TRBP2_DSRM_1	UniProtKB/Swiss-Prot
	TRBP2_DSRM_2	UniProtKB/Swiss-Prot
	TRBP2_DSRM_3	UniProtKB/Swiss-Prot
KEGG Report	rno:363006	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:124970	IMAGE-MGC_LOAD
NCBI Gene	363006	ENTREZGENE
PANTHER	LOQUACIOUS, ISOFORM B	UniProtKB/Swiss-Prot
	PTHR46205:SF1	UniProtKB/Swiss-Prot
Pfam	dsrm	UniProtKB/Swiss-Prot
PhenoGen	Tarbp2	PhenoGen
PROSITE	DS_RBD	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000042355	RatGTEx
SMART	DSRM	UniProtKB/Swiss-Prot
Superfamily-SCOP	dsRNA-binding domain-like	UniProtKB/Swiss-Prot
UniProt	A0A8I5Y6G0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZPX6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AKV0_RAT	UniProtKB/TrEMBL
	Q3SWU0	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-05-05	Tarbp2	Tarbp2 subunit of RISC loading complex	Tarbp2	TARBP2 subunit of RISC loading complex	Name changed	629549	APPROVED
2019-04-02	Tarbp2	TARBP2 subunit of RISC loading complex	Tarbp2	TARBP2, RISC loading complex RNA binding subunit	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2016-05-23	Tarbp2	TARBP2, RISC loading complex RNA binding subunit	Tarbp2	TAR (HIV-1) RNA binding protein 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-10-30	Tarbp2	TAR (HIV-1) RNA binding protein 2	Tarbp2	TAR (HIV) RNA binding protein 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Tarbp2	TAR (HIV) RNA binding protein 2	Tarbp2_predicted	TAR (HIV) RNA binding protein 2 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Tarbp2_predicted	TAR (HIV) RNA binding protein 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

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Imported Disease Annotations - CTD

RGD Manual Annotations