Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Microsatellite Instability | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:25701956 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Microsatellite Instability | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:25701956 | |
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# | Reference Title | Reference Citation |
1. | GOAs Human GO annotations | GOA_HUMAN data from the GO Consortium |
2. | The widespread regulation of microRNA biogenesis, function and decay. | Krol J, etal., Nat Rev Genet. 2010 Sep;11(9):597-610. Epub 2010 Jul 27. |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:2011739 | PMID:7568151 | PMID:7774957 | PMID:8455607 | PMID:8723388 | PMID:10330179 | PMID:10759868 | PMID:11060498 | PMID:11228241 | PMID:11438532 | PMID:11443112 | PMID:11641396 |
PMID:12023963 | PMID:12477932 | PMID:12549820 | PMID:14585207 | PMID:14585331 | PMID:15123692 | PMID:15973356 | PMID:16142218 | PMID:16169070 | PMID:16271387 | PMID:16343534 | PMID:16357216 |
PMID:16424907 | PMID:16629595 | PMID:17360756 | PMID:17452327 | PMID:17507929 | PMID:17531811 | PMID:17932509 | PMID:18029348 | PMID:18178619 | PMID:18654987 | PMID:18936160 | PMID:18948111 |
PMID:19047128 | PMID:19060904 | PMID:19138993 | PMID:19422693 | PMID:19668211 | PMID:19716330 | PMID:19804757 | PMID:19820710 | PMID:19836333 | PMID:19953087 | PMID:20211142 | PMID:20211803 |
PMID:20585341 | PMID:20732906 | PMID:20877318 | PMID:21080422 | PMID:21145461 | PMID:21526770 | PMID:21832049 | PMID:21858095 | PMID:21873635 | PMID:21900206 | PMID:21903422 | PMID:22025453 |
PMID:22163034 | PMID:22658674 | PMID:22698405 | PMID:22933564 | PMID:22999255 | PMID:23006623 | PMID:23251028 | PMID:23361462 | PMID:23435228 | PMID:23550157 | PMID:23622242 | PMID:23636329 |
PMID:23658827 | PMID:23661684 | PMID:23671264 | PMID:23690119 | PMID:24025624 | PMID:24141778 | PMID:24563327 | PMID:24563462 | PMID:24778252 | PMID:25043050 | PMID:25277244 | PMID:25416956 |
PMID:25437560 | PMID:25446899 | PMID:25557550 | PMID:25608000 | PMID:25659891 | PMID:25668122 | PMID:25814554 | PMID:25910212 | PMID:26186194 | PMID:26486325 | PMID:26496610 | PMID:26582366 |
PMID:26796812 | PMID:26972000 | PMID:27173435 | PMID:27332119 | PMID:27407113 | PMID:27432908 | PMID:27599909 | PMID:27743889 | PMID:28174252 | PMID:28380382 | PMID:28514442 | PMID:29229926 |
PMID:29231267 | PMID:29348664 | PMID:29373753 | PMID:29395067 | PMID:29509190 | PMID:29939295 | PMID:30390472 | PMID:30657254 | PMID:30927622 | PMID:31300274 | PMID:31495888 | PMID:31527615 |
PMID:31753913 | PMID:31799626 | PMID:32296183 | PMID:32305960 | PMID:32513696 | PMID:32640226 | PMID:32989298 | PMID:32994395 | PMID:33328224 | PMID:33459340 | PMID:33484209 | PMID:33845483 |
PMID:33957083 | PMID:33961781 | PMID:34133714 | PMID:34578187 | PMID:34732716 | PMID:35008634 | PMID:35013218 | PMID:35271311 | PMID:35563538 | PMID:35819319 | PMID:36217029 | PMID:36244648 |
PMID:36543142 |
TARBP2 (Homo sapiens - human) |
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Tarbp2 (Mus musculus - house mouse) |
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Tarbp2 (Rattus norvegicus - Norway rat) |
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Tarbp2 (Chinchilla lanigera - long-tailed chinchilla) |
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TARBP2 (Pan paniscus - bonobo/pygmy chimpanzee) |
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TARBP2 (Canis lupus familiaris - dog) |
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Tarbp2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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TARBP2 (Sus scrofa - pig) |
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TARBP2 (Chlorocebus sabaeus - green monkey) |
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Tarbp2 (Heterocephalus glaber - naked mole-rat) |
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.
Variants in TARBP2
12 total Variants |
Name | Type | Condition(s) | Position(s) | Clinical significance |
GRCh38/hg38 12q13.13(chr12:53099658-53724525)x1 | copy number loss | See cases [RCV000052811] | Chr12:53099658..53724525 [GRCh38] Chr12:53493442..54118309 [GRCh37] Chr12:51779709..52404576 [NCBI36] Chr12:12q13.13 |
pathogenic |
GRCh38/hg38 12q13.13(chr12:53224024-54222450)x1 | copy number loss | See cases [RCV000052812] | Chr12:53224024..54222450 [GRCh38] Chr12:53617808..54616234 [GRCh37] Chr12:51904075..52902501 [NCBI36] Chr12:12q13.13 |
pathogenic |
GRCh38/hg38 12q13.13(chr12:52851850-53558824)x3 | copy number gain | See cases [RCV000138030] | Chr12:52851850..53558824 [GRCh38] Chr12:53245634..53952608 [GRCh37] Chr12:51531901..52238875 [NCBI36] Chr12:12q13.13 |
likely pathogenic |
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 | copy number gain | See cases [RCV000139555] | Chr12:121271..133196807 [GRCh38] Chr12:282465..133773393 [GRCh37] Chr12:100698..132283466 [NCBI36] Chr12:12p13.33-q24.33 |
pathogenic |
GRCh38/hg38 12q13.13-13.3(chr12:53420606-56202942)x3 | copy number gain | See cases [RCV000141435] | Chr12:53420606..56202942 [GRCh38] Chr12:53814390..56596726 [GRCh37] Chr12:52100657..54882993 [NCBI36] Chr12:12q13.13-13.3 |
pathogenic |
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3 | copy number gain | See cases [RCV000258805] | Chr12:1..133851895 [GRCh37] Chr12:12p13.33-q24.33 |
pathogenic|likely pathogenic |
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3 | copy number gain | See cases [RCV000510482] | Chr12:173787..133777902 [GRCh37] Chr12:12p13.33-q24.33 |
pathogenic |
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902) | copy number gain | See cases [RCV000511643] | Chr12:173787..133777902 [GRCh37] Chr12:12p13.33-q24.33 |
pathogenic |
NM_134323.2(TARBP2):c.269T>A (p.Val90Glu) | single nucleotide variant | Inborn genetic diseases [RCV003276395] | Chr12:53503072 [GRCh38] Chr12:53896856 [GRCh37] Chr12:12q13.13 |
uncertain significance |
NC_000012.11:g.26370251_54361538inv | inversion | not specified [RCV000714265] | Chr12:26370251..54361538 [GRCh37] Chr12:12p12.1-q13.13 |
uncertain significance |
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3 | copy number gain | not provided [RCV000750253] | Chr12:621220..133779118 [GRCh37] Chr12:12p13.33-q24.33 |
pathogenic |
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3 | copy number gain | not provided [RCV000750246] | Chr12:191619..133777645 [GRCh37] Chr12:12p13.33-q24.33 |
pathogenic |
Single allele | deletion | Neurodevelopmental disorder [RCV000787381] | Chr12:53784698..54741363 [GRCh37] Chr12:12q13.13 |
pathogenic |
NM_134323.2(TARBP2):c.423-3C>G | single nucleotide variant | not provided [RCV000962472] | Chr12:53504394 [GRCh38] Chr12:53898178 [GRCh37] Chr12:12q13.13 |
benign |
NM_134323.2(TARBP2):c.942T>C (p.Ile314=) | single nucleotide variant | not provided [RCV000957070] | Chr12:53505849 [GRCh38] Chr12:53899633 [GRCh37] Chr12:12q13.13 |
benign |
GRCh37/hg19 12q13.13(chr12:53614278-53971802)x1 | copy number loss | not provided [RCV001259613] | Chr12:53614278..53971802 [GRCh37] Chr12:12q13.13 |
likely pathogenic |
NM_134323.2(TARBP2):c.47T>C (p.Leu16Pro) | single nucleotide variant | Inborn genetic diseases [RCV002749276] | Chr12:53501455 [GRCh38] Chr12:53895239 [GRCh37] Chr12:12q13.13 |
uncertain significance |
NM_134323.2(TARBP2):c.52A>G (p.Ser18Gly) | single nucleotide variant | Inborn genetic diseases [RCV002693084] | Chr12:53501460 [GRCh38] Chr12:53895244 [GRCh37] Chr12:12q13.13 |
uncertain significance |
NM_134323.2(TARBP2):c.977T>C (p.Leu326Pro) | single nucleotide variant | Inborn genetic diseases [RCV002831523] | Chr12:53506024 [GRCh38] Chr12:53899808 [GRCh37] Chr12:12q13.13 |
uncertain significance |
NM_134323.2(TARBP2):c.1050G>C (p.Glu350Asp) | single nucleotide variant | Inborn genetic diseases [RCV002920933] | Chr12:53506097 [GRCh38] Chr12:53899881 [GRCh37] Chr12:12q13.13 |
uncertain significance |
NM_134323.2(TARBP2):c.520C>T (p.Arg174Trp) | single nucleotide variant | Inborn genetic diseases [RCV003213060] | Chr12:53504722 [GRCh38] Chr12:53898506 [GRCh37] Chr12:12q13.13 |
uncertain significance |
NM_134323.2(TARBP2):c.298A>G (p.Met100Val) | single nucleotide variant | Inborn genetic diseases [RCV003185573] | Chr12:53503101 [GRCh38] Chr12:53896885 [GRCh37] Chr12:12q13.13 |
uncertain significance |
NM_134323.2(TARBP2):c.1000G>A (p.Ala334Thr) | single nucleotide variant | Inborn genetic diseases [RCV003302637] | Chr12:53506047 [GRCh38] Chr12:53899831 [GRCh37] Chr12:12q13.13 |
uncertain significance |
NM_134323.2(TARBP2):c.25G>A (p.Gly9Ser) | single nucleotide variant | Inborn genetic diseases [RCV003356449] | Chr12:53501433 [GRCh38] Chr12:53895217 [GRCh37] Chr12:12q13.13 |
uncertain significance |
NM_134323.2(TARBP2):c.983A>T (p.Glu328Val) | single nucleotide variant | Inborn genetic diseases [RCV003369603] | Chr12:53506030 [GRCh38] Chr12:53899814 [GRCh37] Chr12:12q13.13 |
uncertain significance |
GRCh37/hg19 12q13.13(chr12:53583828-53922629)x3 | copy number gain | not provided [RCV003484869] | Chr12:53583828..53922629 [GRCh37] Chr12:12q13.13 |
uncertain significance |
GRCh37/hg19 12q13.13(chr12:53502510-54256094)x3 | copy number gain | not specified [RCV003986989] | Chr12:53502510..54256094 [GRCh37] Chr12:12q13.13 |
uncertain significance |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
RH39878 |
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RH120510 |
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G42930 |
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STS-M60801 |
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TARBP2__5191 |
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STS-R72841 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | sensory system | visual system | adipose tissue | appendage | entire extraembryonic component | pharyngeal arch | |
High | ||||||||||||||||||
Medium | 2099 | 1157 | 1528 | 450 | 1255 | 296 | 3278 | 846 | 1866 | 295 | 1427 | 1529 | 168 | 1086 | 1757 | 3 | ||
Low | 338 | 1830 | 197 | 174 | 696 | 169 | 1078 | 1351 | 1861 | 124 | 32 | 82 | 5 | 1 | 118 | 1031 | 3 | 2 |
Below cutoff | 1 | 7 | 1 | 2 | 2 |
RefSeq Transcripts | NM_004178 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_134323 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_134324 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005269114 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005269115 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005269117 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005269120 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005269122 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006719581 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_011538712 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017019910 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017019911 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_047429485 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054373102 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054373103 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054373104 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054373105 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_001748860 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_944695 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC023509 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AF281068 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK290737 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK293728 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK309569 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC002419 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC005860 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC150583 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BI771121 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BT007140 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH471054 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CP068266 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
M60801 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
U08998 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENST00000266987 ⟹ ENSP00000266987 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000394357 ⟹ ENSP00000377885 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000456234 ⟹ ENSP00000416077 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000546763 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000546889 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000547064 ⟹ ENSP00000448199 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000547388 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000547541 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000548971 ⟹ ENSP00000447993 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000549028 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000549572 ⟹ ENSP00000448948 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000549610 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000549679 ⟹ ENSP00000448943 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000550147 ⟹ ENSP00000450320 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000550407 ⟹ ENSP00000447767 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000551157 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000551741 ⟹ ENSP00000447262 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000552650 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000552817 ⟹ ENSP00000458011 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000552857 ⟹ ENSP00000449537 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000710362 ⟹ ENSP00000518233 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_004178 ⟹ NP_004169 | ||||||||||||||||||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_134323 ⟹ NP_599150 | ||||||||||||||||||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_134324 ⟹ NP_599151 | ||||||||||||||||||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_005269115 ⟹ XP_005269172 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_011538712 ⟹ XP_011537014 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017019911 ⟹ XP_016875400 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_047429485 ⟹ XP_047285441 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054373102 ⟹ XP_054229077 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054373103 ⟹ XP_054229078 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054373104 ⟹ XP_054229079 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054373105 ⟹ XP_054229080 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_004169 | (Get FASTA) | NCBI Sequence Viewer |
NP_599150 | (Get FASTA) | NCBI Sequence Viewer | |
NP_599151 | (Get FASTA) | NCBI Sequence Viewer | |
XP_005269172 | (Get FASTA) | NCBI Sequence Viewer | |
XP_011537014 | (Get FASTA) | NCBI Sequence Viewer | |
XP_016875400 | (Get FASTA) | NCBI Sequence Viewer | |
XP_047285441 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054229077 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054229078 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054229079 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054229080 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAA36765 | (Get FASTA) | NCBI Sequence Viewer |
AAB50581 | (Get FASTA) | NCBI Sequence Viewer | |
AAH05860 | (Get FASTA) | NCBI Sequence Viewer | |
AAL55730 | (Get FASTA) | NCBI Sequence Viewer | |
AAL55731 | (Get FASTA) | NCBI Sequence Viewer | |
AAP35804 | (Get FASTA) | NCBI Sequence Viewer | |
BAF83426 | (Get FASTA) | NCBI Sequence Viewer | |
BAH11581 | (Get FASTA) | NCBI Sequence Viewer | |
EAW96717 | (Get FASTA) | NCBI Sequence Viewer | |
EAW96718 | (Get FASTA) | NCBI Sequence Viewer | |
EAW96719 | (Get FASTA) | NCBI Sequence Viewer | |
EAW96720 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSP00000266987 | ||
ENSP00000266987.2 | |||
ENSP00000377885 | |||
ENSP00000377885.2 | |||
ENSP00000416077 | |||
ENSP00000416077.2 | |||
ENSP00000447262.1 | |||
ENSP00000447767 | |||
ENSP00000447767.1 | |||
ENSP00000447993.1 | |||
ENSP00000448199.2 | |||
ENSP00000448943.1 | |||
ENSP00000448948.1 | |||
ENSP00000449537.1 | |||
ENSP00000450320.1 | |||
ENSP00000458011.1 | |||
ENSP00000518233.1 | |||
GenBank Protein | Q15633 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_599150 ⟸ NM_134323 |
- Peptide Label: | isoform a |
- UniProtKB: | Q8WY33 (UniProtKB/Swiss-Prot), Q8WY32 (UniProtKB/Swiss-Prot), Q12878 (UniProtKB/Swiss-Prot), Q9BRY2 (UniProtKB/Swiss-Prot), Q15633 (UniProtKB/Swiss-Prot), A8K3X2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_004169 ⟸ NM_004178 |
- Peptide Label: | isoform b |
- UniProtKB: | A8K3X2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_599151 ⟸ NM_134324 |
- Peptide Label: | isoform b |
- UniProtKB: | A8K3X2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_005269172 ⟸ XM_005269115 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A8K3X2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_011537014 ⟸ XM_011538712 |
- Peptide Label: | isoform X3 |
- Sequence: |
RefSeq Acc Id: | XP_016875400 ⟸ XM_017019911 |
- Peptide Label: | isoform X3 |
- Sequence: |
RefSeq Acc Id: | ENSP00000266987 ⟸ ENST00000266987 |
RefSeq Acc Id: | ENSP00000448199 ⟸ ENST00000547064 |
RefSeq Acc Id: | ENSP00000447993 ⟸ ENST00000548971 |
RefSeq Acc Id: | ENSP00000416077 ⟸ ENST00000456234 |
RefSeq Acc Id: | ENSP00000448943 ⟸ ENST00000549679 |
RefSeq Acc Id: | ENSP00000448948 ⟸ ENST00000549572 |
RefSeq Acc Id: | ENSP00000450320 ⟸ ENST00000550147 |
RefSeq Acc Id: | ENSP00000447767 ⟸ ENST00000550407 |
RefSeq Acc Id: | ENSP00000377885 ⟸ ENST00000394357 |
RefSeq Acc Id: | ENSP00000447262 ⟸ ENST00000551741 |
RefSeq Acc Id: | ENSP00000458011 ⟸ ENST00000552817 |
RefSeq Acc Id: | ENSP00000449537 ⟸ ENST00000552857 |
RefSeq Acc Id: | XP_047285441 ⟸ XM_047429485 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_054229078 ⟸ XM_054373103 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_054229077 ⟸ XM_054373102 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_054229079 ⟸ XM_054373104 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_054229080 ⟸ XM_054373105 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | ENSP00000518233 ⟸ ENST00000710362 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q15633-F1-model_v2 | AlphaFold | Q15633 | 1-366 | view protein structure |
RGD ID: | 6790528 | ||||||||
Promoter ID: | HG_KWN:15765 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4 | ||||||||
Transcripts: | NM_004178, NM_134323, NM_134324, UC001SDQ.1, UC001SDR.1, UC001SDS.1, UC001SDU.1, UC001SDV.1, UC009ZNB.1 | ||||||||
Position: |
|
RGD ID: | 7224135 | ||||||||
Promoter ID: | EPDNEW_H17813 | ||||||||
Type: | initiation region | ||||||||
Name: | TARBP2_3 | ||||||||
Description: | TARBP2, RISC loading complex RNA binding subunit | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H17814 EPDNEW_H17816 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
RGD ID: | 7224137 | ||||||||
Promoter ID: | EPDNEW_H17814 | ||||||||
Type: | initiation region | ||||||||
Name: | TARBP2_1 | ||||||||
Description: | TARBP2, RISC loading complex RNA binding subunit | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H17813 EPDNEW_H17816 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
RGD ID: | 7224141 | ||||||||
Promoter ID: | EPDNEW_H17816 | ||||||||
Type: | initiation region | ||||||||
Name: | TARBP2_2 | ||||||||
Description: | TARBP2, RISC loading complex RNA binding subunit | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H17813 EPDNEW_H17814 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | HGNC:11569 | AgrOrtholog |
COSMIC | TARBP2 | COSMIC |
Ensembl Genes | ENSG00000139546 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENST00000266987 | ENTREZGENE |
ENST00000266987.7 | UniProtKB/Swiss-Prot | |
ENST00000394357 | ENTREZGENE | |
ENST00000394357.6 | UniProtKB/Swiss-Prot | |
ENST00000456234 | ENTREZGENE | |
ENST00000456234.6 | UniProtKB/Swiss-Prot | |
ENST00000547064.5 | UniProtKB/TrEMBL | |
ENST00000548971.5 | UniProtKB/TrEMBL | |
ENST00000549572.5 | UniProtKB/TrEMBL | |
ENST00000549679.5 | UniProtKB/TrEMBL | |
ENST00000550147.5 | UniProtKB/TrEMBL | |
ENST00000550407 | ENTREZGENE | |
ENST00000550407.1 | UniProtKB/TrEMBL | |
ENST00000551741.5 | UniProtKB/TrEMBL | |
ENST00000552817.5 | UniProtKB/TrEMBL | |
ENST00000552857.5 | UniProtKB/TrEMBL | |
ENST00000710362.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 3.30.160.20 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
GTEx | ENSG00000139546 | GTEx |
HGNC ID | HGNC:11569 | ENTREZGENE |
Human Proteome Map | TARBP2 | Human Proteome Map |
InterPro | dsRBD_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
TRBP2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
TRBP2_DSRM_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
TRBP2_DSRM_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
TRBP2_DSRM_3 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | hsa:6895 | UniProtKB/Swiss-Prot |
NCBI Gene | 6895 | ENTREZGENE |
OMIM | 605053 | OMIM |
PANTHER | LOQUACIOUS, ISOFORM B | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR46205:SF1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | dsrm | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PharmGKB | PA36334 | PharmGKB |
PROSITE | DS_RBD | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SMART | DSRM | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | dsRNA-binding domain-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0AA34QVS4_HUMAN | UniProtKB/TrEMBL |
A8K3X2 | ENTREZGENE, UniProtKB/TrEMBL | |
F8VP94_HUMAN | UniProtKB/TrEMBL | |
F8VSA1_HUMAN | UniProtKB/TrEMBL | |
F8VTT7_HUMAN | UniProtKB/TrEMBL | |
F8VW32_HUMAN | UniProtKB/TrEMBL | |
F8VYK3_HUMAN | UniProtKB/TrEMBL | |
F8VYK6_HUMAN | UniProtKB/TrEMBL | |
F8VZ57_HUMAN | UniProtKB/TrEMBL | |
F8VZZ7_HUMAN | UniProtKB/TrEMBL | |
H3BV98_HUMAN | UniProtKB/TrEMBL | |
Q12878 | ENTREZGENE | |
Q15633 | ENTREZGENE | |
Q8WY32 | ENTREZGENE | |
Q8WY33 | ENTREZGENE | |
Q9BRY2 | ENTREZGENE | |
TRBP2_HUMAN | UniProtKB/Swiss-Prot | |
UniProt Secondary | Q12878 | UniProtKB/Swiss-Prot |
Q8WY32 | UniProtKB/Swiss-Prot | |
Q8WY33 | UniProtKB/Swiss-Prot | |
Q9BRY2 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2019-02-19 | TARBP2 | TARBP2 subunit of RISC loading complex | TARBP2 | TARBP2, RISC loading complex RNA binding subunit | Symbol and/or name change | 5135510 | APPROVED |
2016-05-19 | TARBP2 | TARBP2, RISC loading complex RNA binding subunit | TARBP2 | TAR (HIV-1) RNA binding protein 2 | Symbol and/or name change | 5135510 | APPROVED |