Advanced Search (OLGA)

Gene: Mdga2 (MAM domain containing glycosylphosphatidylinositol anchor 2) Rattus norvegicus

Analyze

Symbol:

Mdga2

Name:

MAM domain containing glycosylphosphatidylinositol anchor 2

RGD ID:

735131

Description:

Involved in regulation of synapse maturation and spinal cord motor neuron differentiation. Is active in glutamatergic synapse and postsynaptic density membrane. Orthologous to human MDGA2 (MAM domain containing glycosylphosphatidylinositol anchor 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; allethrin.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

MAM domain-containing glycosylphosphatidylinositol anchor protein 2; MAM domain-containing protein 1; Mamdc1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	90,482,687 - 91,346,784 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	90,498,119 - 91,344,413 (-)	Ensembl				GRCr8
mRatBN7.2	6	84,746,422 - 85,608,640 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	84,761,941 - 85,608,126 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	85,123,229 - 85,979,390 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	85,422,600 - 86,278,801 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	84,864,059 - 85,717,130 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	88,442,620 - 89,292,454 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	88,447,749 - 88,917,070 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	97,916,163 - 98,773,394 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	88,155,407 - 89,020,699 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	83,298,219 - 84,140,941 (-)	NCBI		Celera
RGSC_v3.1	6	88,158,867 - 89,024,155 (-)	NCBI
Cytogenetic Map	6	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

intellectual disability (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

allethrin (EXP)

androgen antagonist (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (EXP)

Butylbenzyl phthalate (ISO)

Butylparaben (EXP)

cadmium dichloride (EXP)

CGP 52608 (ISO)

choline (ISO)

cyhalothrin (EXP)

cypermethrin (EXP)

DDE (EXP)

dibutyl phthalate (EXP)

dimethylarsinic acid (EXP)

enzacamene (EXP)

epoxiconazole (EXP)

ethanol (ISO)

fenvalerate (EXP)

folic acid (ISO)

L-methionine (ISO)

lead(0) (ISO)

linuron (EXP)

methotrexate (ISO)

O-methyleugenol (ISO)

paracetamol (EXP)

prochloraz (EXP)

procymidone (EXP)

pyrethrins (EXP)

resveratrol (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triclosan (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell differentiation in spinal cord (IEA)

central nervous system neuron differentiation (IEA)

gene expression (ISO)

motor behavior (ISO)

negative regulation of neuron apoptotic process (ISO)

nervous system development (IBA)

neuromuscular process (ISO)

neuron migration (ISO)

pattern specification process (ISO)

regulation of presynapse assembly (ISO)

regulation of synapse maturation (IDA,IEA,IMP)

regulation of synaptic membrane adhesion (ISO)

spinal cord motor neuron differentiation (IEP)

Cellular Component

GABA-ergic synapse (ISO)

glutamatergic synapse (IDA,IMP,ISO)

membrane (IEA)

plasma membrane (IEA)

postsynaptic density membrane (IDA,IMP)

side of membrane (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Identification and characterization of two novel brain-derived immunoglobulin superfamily members with a unique structural organization.	Litwack ED, etal., Mol Cell Neurosci. 2004 Feb;25(2):263-74.
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	MDGAs are fast-diffusing molecules that delay excitatory synapse development by altering neuroligin behavior.	Toledo A, etal., Elife. 2022 May 9;11:e75233. doi: 10.7554/eLife.75233.

Additional References at PubMed

PMID:1633717	PMID:23248271	PMID:25162227	PMID:27608760

Genomics

Comparative Map Data

Mdga2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	90,482,687 - 91,346,784 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	90,498,119 - 91,344,413 (-)	Ensembl				GRCr8
mRatBN7.2	6	84,746,422 - 85,608,640 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	84,761,941 - 85,608,126 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	85,123,229 - 85,979,390 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	85,422,600 - 86,278,801 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	84,864,059 - 85,717,130 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	88,442,620 - 89,292,454 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	88,447,749 - 88,917,070 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	97,916,163 - 98,773,394 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	88,155,407 - 89,020,699 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	83,298,219 - 84,140,941 (-)	NCBI		Celera
RGSC_v3.1	6	88,158,867 - 89,024,155 (-)	NCBI
Cytogenetic Map	6	q24	NCBI

MDGA2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	46,839,623 - 47,675,605 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	46,840,092 - 47,675,605 (-)	Ensembl			hg38	GRCh38
GRCh37	14	47,308,826 - 48,144,808 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	46,379,045 - 46,882,145 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	46,379,045 - 46,882,145	NCBI
Celera	14	27,169,381 - 28,004,719 (-)	NCBI		Celera
Cytogenetic Map	14	q21.3	NCBI
HuRef	14	27,426,615 - 28,261,881 (-)	NCBI		HuRef
CHM1_1	14	47,247,613 - 48,082,719 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	41,038,514 - 41,874,449 (-)	NCBI		T2T-CHM13v2.0

Mdga2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	66,512,832 - 67,269,323 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	66,512,834 - 67,269,323 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	66,459,419 - 67,222,549 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	66,466,060 - 67,222,549 (-)	Ensembl			mm10	GRCm38
MGSCv37	12	67,572,169 - 68,322,190 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	67,389,787 - 68,139,808 (-)	NCBI		MGSCv36	mm8
Celera	12	67,602,561 - 68,352,775 (-)	NCBI		Celera
Cytogenetic Map	12	C2	NCBI
cM Map	12	27.63	NCBI

Mdga2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	14,684,611 - 15,449,388 (+)	Ensembl
ChiLan1.0	NW_004955409	14,684,252 - 15,449,388 (+)	NCBI	ChiLan1.0	ChiLan1.0

MDGA2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	47,971,234 - 48,818,509 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	47,187,743 - 48,036,253 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	27,434,904 - 28,274,969 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	45,752,214 - 46,584,148 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	45,752,214 - 46,583,991 (-)	Ensembl			panPan2	panpan1.1

MDGA2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	23,827,284 - 24,608,003 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	23,832,475 - 24,607,866 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	23,644,302 - 23,948,023 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	23,992,881 - 24,785,403 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	23,999,793 - 24,785,345 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	23,651,714 - 24,434,692 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	23,720,107 - 24,501,367 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	24,049,174 - 24,831,369 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mdga2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	55,878,524 - 56,640,257 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936583	2,048,733 - 2,804,135 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936583	2,048,655 - 2,804,135 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MDGA2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	176,770,071 - 177,593,876 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	176,770,045 - 177,595,012 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	196,939,349 - 197,065,369 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MDGA2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	23,853,710 - 24,705,276 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	23,856,533 - 24,318,531 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	12,230,959 - 13,075,887 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mdga2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	20,951,954 - 21,754,936 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624731	20,951,651 - 21,760,267 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mdga2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	80,226,101 - 81,028,365 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mdga2
5099 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	68
Count of miRNA genes:	59
Interacting mature miRNAs:	65
Transcripts:	ENSRNOT00000000767
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4145119	Mcs25	Mammary carcinoma susceptibility QTL 25		0.0001	mammary gland integrity trait (VT:0010552)	ratio of deaths to total study population during a period of time (CMO:0001023)	6	71278722	116278722	Rat
70176	Mcsm1	Mammary carcinoma susceptibility modifier QTL 1			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	64367996	109367996	Rat
2293088	Iddm28	Insulin dependent diabetes mellitus QTL 28	5.21		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	68767270	135411972	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	88019181	136741135	Rat
10054138	Gmadr3	Adrenal mass QTL 3	3.68	0.00045	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	6	90871046	135871046	Rat
1558641	Cm47	Cardiac mass QTL 47	2.9	0.001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	6	63457441	94939581	Rat
724524	Uae2	Urinary albumin excretion QTL 2	2.7	0.0005	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	79198463	144254945	Rat
4889933	Bss88	Bone structure and strength QTL 88	3.8		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	6	53684921	98684921	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
724513	Uae14	Urinary albumin excretion QTL 14	6.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	46047353	91047353	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
2293837	Kiddil1	Kidney dilation QTL 1	3.7		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	86867923	110125012	Rat
2293842	Kiddil3	Kidney dilation QTL 3	4.3		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	86867923	110125012	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	84490437	129490437	Rat
4889848	Pur25	Proteinuria QTL 25	14	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	63037319	95934232	Rat
10054123	Srcrt6	Stress Responsive Cort QTL 6	2.5	0.0043	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	90871046	135871046	Rat
5684963	Bss99	Bone structure and strength QTL 99	3.1		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	6	53684921	98684921	Rat
1576302	Schws4	Schwannoma susceptibility QTL 4		0.0078	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	78204640	123204640	Rat
5684992	Bmd83	Bone mineral density QTL 82	4.8		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	6	53684921	98684921	Rat
1300075	Glom7	Glomerulus QTL 7	5.6	0.0000002	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	6	76937178	121937178	Rat
1331789	Rf37	Renal function QTL 37	3.224		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	86494122	112380234	Rat
6893332	Cm74	Cardiac mass QTL 74	0.4	0.64	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	6	63457441	94939581	Rat

Markers in Region

D6Rat104

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	6	91,047,225 - 91,047,353 (+)	Marker Load Pipeline
mRatBN7.2	6	85,311,061 - 85,311,189 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	88,996,335 - 88,996,462	NCBI	Rnor6.0
Rnor_5.0	6	98,477,922 - 98,478,049	UniSTS	Rnor5.0
RGSC_v3.4	6	88,723,450 - 88,723,578	RGD	RGSC3.4
RGSC_v3.4	6	88,723,451 - 88,723,578	UniSTS	RGSC3.4
Celera	6	83,844,029 - 83,844,156	UniSTS
RGSC_v3.1	6	88,726,906 - 88,727,034	RGD
SHRSP x BN Map	6	52.2299	RGD
SHRSP x BN Map	6	52.2299	UniSTS
FHH x ACI Map	6	62.43	RGD
Cytogenetic Map	6	q24	UniSTS

D6Got104

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	84,981,008 - 84,981,246 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	88,671,358 - 88,671,595	NCBI	Rnor6.0
Rnor_5.0	6	98,152,816 - 98,153,053	UniSTS	Rnor5.0
RGSC_v3.4	6	88,391,205 - 88,391,443	RGD	RGSC3.4
RGSC_v3.4	6	88,391,206 - 88,391,443	UniSTS	RGSC3.4
Celera	6	83,515,888 - 83,516,125	UniSTS
RGSC_v3.1	6	88,394,662 - 88,394,899	RGD
RH 3.4 Map	6	582.7	UniSTS
RH 3.4 Map	6	582.7	RGD
RH 2.0 Map	6	810.0	RGD
Cytogenetic Map	6	q24	UniSTS

D6Got103

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	85,094,333 - 85,094,590 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	88,780,298 - 88,780,554	NCBI	Rnor6.0
Rnor_5.0	6	98,261,756 - 98,262,012	UniSTS	Rnor5.0
RGSC_v3.4	6	88,504,522 - 88,504,779	RGD	RGSC3.4
RGSC_v3.4	6	88,504,523 - 88,504,779	UniSTS	RGSC3.4
Celera	6	83,627,621 - 83,627,877	UniSTS
RGSC_v3.1	6	88,507,979 - 88,508,235	RGD
RH 3.4 Map	6	591.5	UniSTS
RH 3.4 Map	6	591.5	RGD
RH 2.0 Map	6	817.4	RGD
Cytogenetic Map	6	q24	UniSTS

RH144396

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	85,008,859 - 85,009,117 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	88,697,746 - 88,698,003	NCBI	Rnor6.0
Rnor_5.0	6	98,179,204 - 98,179,461	UniSTS	Rnor5.0
RGSC_v3.4	6	88,419,054 - 88,419,311	UniSTS	RGSC3.4
Celera	6	83,542,661 - 83,542,918	UniSTS
RH 3.4 Map	6	580.3	UniSTS
Cytogenetic Map	6	q24	UniSTS

RH144515

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	85,212,323 - 85,212,562 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	88,898,084 - 88,898,322	NCBI	Rnor6.0
Rnor_5.0	6	98,380,320 - 98,380,558	UniSTS	Rnor5.0
RGSC_v3.4	6	88,623,384 - 88,623,622	UniSTS	RGSC3.4
Celera	6	83,745,608 - 83,745,846	UniSTS
RH 3.4 Map	6	577.4	UniSTS
Cytogenetic Map	6	q24	UniSTS

AW530832

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	84,766,737 - 84,766,908 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	88,452,546 - 88,452,716	NCBI	Rnor6.0
Rnor_5.0	6	97,936,381 - 97,936,551	UniSTS	Rnor5.0
RGSC_v3.4	6	88,160,239 - 88,160,409	UniSTS	RGSC3.4
Celera	6	83,303,051 - 83,303,221	UniSTS
RH 3.4 Map	6	587.3	UniSTS
Cytogenetic Map	6	q24	UniSTS

RH138320

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	85,388,051 - 85,388,177 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	89,072,354 - 89,072,479	NCBI	Rnor6.0
Rnor_5.0	6	98,553,941 - 98,554,066	UniSTS	Rnor5.0
RGSC_v3.4	6	88,800,671 - 88,800,796	UniSTS	RGSC3.4
Celera	6	83,921,238 - 83,921,363	UniSTS
Cytogenetic Map	6	q24	UniSTS

Satt124

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	85,582,214 - 85,583,701 (+)	MAPPER	mRatBN7.2
mRatBN7.2	6	85,582,214 - 85,583,702 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	89,266,013 - 89,267,500	NCBI	Rnor6.0
Rnor_6.0	6	89,266,013 - 89,267,499	NCBI	Rnor6.0
Rnor_5.0	6	98,747,313 - 98,748,800	UniSTS	Rnor5.0
Rnor_5.0	6	98,747,313 - 98,748,799	UniSTS	Rnor5.0
RGSC_v3.4	6	88,994,685 - 88,996,171	UniSTS	RGSC3.4
RGSC_v3.4	6	88,994,685 - 88,996,172	UniSTS	RGSC3.4
Celera	6	84,114,943 - 84,116,424	UniSTS
Celera	6	84,114,943 - 84,116,423	UniSTS
Cytogenetic Map	6	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
13	10	51	147	60	59	31	23	31	6	213	99	4	126	62	92	28	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_199269	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY371924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000000767 ⟹ ENSRNOP00000000767

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	90,498,119 - 91,344,413 (-)	Ensembl
mRatBN7.2 Ensembl	6	84,761,941 - 85,608,126 (-)	Ensembl
Rnor_6.0 Ensembl	6	88,447,749 - 88,917,070 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116494 ⟹ ENSRNOP00000092110

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	90,498,119 - 91,344,413 (-)	Ensembl
mRatBN7.2 Ensembl	6	84,761,941 - 85,608,126 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000153837 ⟹ ENSRNOP00000100044

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	90,507,450 - 91,344,413 (-)	Ensembl

RefSeq Acc Id:

NM_199269 ⟹ NP_954890

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	90,498,084 - 91,344,393 (-)	NCBI
mRatBN7.2	6	84,761,906 - 85,608,231 (-)	NCBI
Rnor_6.0	6	88,447,714 - 89,292,027 (-)	NCBI
Rnor_5.0	6	97,916,163 - 98,773,394 (-)	NCBI
RGSC_v3.4	6	88,155,407 - 89,020,699 (-)	RGD
Celera	6	83,298,219 - 84,140,941 (-)	RGD

Sequence:

show sequence

GCTCCGCTCACGGCCGCTGATAGGGAAGGACAGACAGACAGCGCTTCCTCCCATTGCTAGCAGT
TCCCGGGCACCTCGACTCGGCCCGGGCACAAGTGGAGCGCGCCTTGCTGGCCGCTGCCCTCCAG
AAGGTCCCACTGCGTCCCTCTTGGGCTGGATATGTTCATGTTCACGTGAAGATGGATTTAGTGT
ACGGTCTCGTGTGGCTGCTGACAGTCCTCCTGGAGGGAATCTCTGGCCAAGGAGTGTACGCTCC
CCCGACGGTTCGGATTGTGCACTCAGGATTGGCCTGTAATATAGAGGAGGAGCGCTACTCGGAA
AGGGTCTATACCATCCGGGAAGGAGAAACGCTAGAGTTGACCTGTCTGGTTACTGGACATCCAC
GCCCACAGATCAGGTGGACCAAAACAGCAGGAAGCGCCTCTGACAGATTCCAAGACTCAAGTGT
CTTCAATGAGACTTTGAGGATTACAAGCATTCAGAGACACCAAGGAGGCCGATATTACTGTAAA
GCAGAGAATGGCTTGGGGTCTCCAGCAATAAAGTCGATCCGAGTGGATGTGTACTACTTGGATG
ATCCTGTAGTAACTGTTCATCAAAGTATAGGTGAAGCTAAAGAACAATTTTACTATGAGAGAAC
AGTGTTCCTCCGATGTGTGGCCAATTCCAACCCCCCTGTGCGCTACAGCTGGAGACGTGGCCAA
GAGGTGTTGCTACAAGGATCAGACAAAGGAGTGGAGATTTACGAGCCCTTTTTTACCCAGGGGG
AAACAAAGATCTTAAAGCTAAAGAATCTCCGACCTCAGGACTATGCTAACTACAGCTGCATTGC
TTCAGTGAGGAACGTGTGTAATATTCCAGACAAGATGGTGTCTTTTAGACTTTCCAATAAAACC
GCTTCTCCGTCAATTAAGCTCTTGGTGGATGACCCTATAGTTGTAAATCCTGGAGAGGCCATAA
CGTTAGTGTGTGTTACAACAGGGGGAGAGCCTATGCCCTCTCTCACCTGGGTCAGGTCCTTCGG
GACTCTGCCTGAAAAGATTGTTTTGAATGGAGGGACATTGACCATACCTGCCATCACCTCTGAT
GATGCTGGGACTTACAGCTGCATTGCCAATAATAATGTGGGAAACCCTGCAAAAAAGTCCACCA
ACATCATTGTGAGAGCATTAAAAAAAGGACGATTTTGGATCACTCCTGATCCTTATCACAAAGA
TGACAACATCCAGATTGGGCGTGAGGTGAAAATATCTTGCCAAGTAGAAGCCGTTCCCTCTGAA
GAGTTAACATTCAGTTGGTTTAAAAACGGCCGTCCATTAAGAAGTTCTGAGCGGATGGTTATTA
CACAGACTGACCCTGATGTGTCCCCCGGAACAACAAATTTGGATATCATTGATTTAAAATTCAC
GGACTTTGGGACTTACACATGCGTGGCCTCTCTGAAGGGAGGAGGAATATCTGATATCAGTATT
GACGTTAACATTTCCAGCAGCACAGTTCCACCCAATCTGACTGTTCCACAGGAAAAATCACCTT
TGGTCACCAGAGAAGGGGACACAATAGAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAAT
CATCCTTTGGTCTAGAGCAGATAAAGAAGTTGCAATGCCTGATGGGACAATGCAAATGGAGAGT
TATGATGGGACCCTCAGGATTGTGAACGTGTCAAGGGAAATGTCTGGGATGTACAGATGCCAGA
CCAGTCAGTACAATGGATTCAACGTGAAGCCCAGAGAAGCCTTGGTGCAGCTCATCGTGCAGTA
TCCCCCAGCTGTGGAACCAGCATTCTTGGAAATCCGTCAAGGACAAGACAGAAGTGTGACCATG
AGCTGTAGGGTTCTAAGAGCCTATCCGATACGTGTGCTGACTTACGAATGGCGTCTGGGCAATA
AATTATTACGGACCGGTCAGTTTGACTCTCAGGAGTATACTGAGTACCCACTAAAGAGTCTTTC
CAATGAAAACTATGGAGTTTATAACTGCAGCATCATTAATGAAGCTGGAGCAGGGAGATGCAGC
TTTCTTGTGACAGGAAAAGCCTATGCCCCAGAGTTCTACTATGACACCTACAACCCTGTGTGGC
AGAACCGACACCGAGTGTATTCTTACAGTCTGCAGTGGACACAAATGAATCCCGATGCAGTGGA
TCGGATTGTCGCATACCGTTTGGGTATTCGGCAGGCTGGACAGCAACGTTGGTGGGAACAGGAG
ATTAAAATAAATGGGAATATTCAAAAGGGAGAACTAATTACATATAACTTGACTGAACTTATAA
AACCAGAGGCCTATGAAGTCCGACTGACTCCTCTCACTAAATTTGGTGAAGGAGATTCAACAAT
TCGTGTAATTAAATATACAGGAGAATTTCACTGTGGATTTGAAGATGGTAATATATGCTTATTC
ACCCAAGATGATACAGATAACTTTGACTGGACAAAGCAAAGTACTGCAACAAGAAATACAAAAT
ACACCCCTAACACAGGTCCCAATGCAGATCGGAGTGGTTCCAAAGAAGGTTTTTATATGTACAT
CGAGACATCGCGACCCAGACTAGAAGGAGAAAAGGCTCGACTTCTCAGCCCTGTATTCAGCATA
GCTCCCAAAAATCCATATGGACCTACCAATAGTGCATATTGTTTCAGTTTCTTCTATCACATGT
ATGGGCAACATATAGGTGTTTTAAATGTATATCTACGTTTGAAAGGGCAGACGACAATAGAGAA
TCCTCTATGGTCTTCGAGTGGGAACAAAGGACAACGATGGAATGAAGCTCATGTTAATATATAT
CCAATTACTTCATTTCAGTTAATTTTTGAAGGCATTCGGGGTCCTGGGATAGAAGGTGACATCG
CCATTGACGATGTGTCAATTGCAGAAGGAGAATGTGCAAAACAAGACCTACCAACTAAGAATTC
CGTGGATGGTGCTGTTGGGATCTTAGTTCATATATGGCTTTTTCCAGTTATCATCCTCATCTCG
ATCTTAAGCCCTCGAAGGTGACCTTATCCTGGCAGAGGCTATAAATGATTCACCAGGCACTGGC
ATGAAGAAAGAGTCTTTGTAAATGGACACTGAAAAAACAAACTACCAAAGATTCCTCCACTGAC
TACTGACTCAAAAATTAAATAATAAGAACAACATTTTTTAAGCACTGGGGATAAAAAAAAGACA
TCTTGGAAATATAACTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAG
CCCTTCAGGTGCTTTTGTGGCTAAAATGATTACAGCTTCATCTGGTTGAACTCTGGAAAAAGAA
AATAAAAGAAAAAGAAAGAAAGAAAAA

hide sequence

RefSeq Acc Id:

XM_008764688 ⟹ XP_008762910

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	90,482,687 - 91,346,784 (-)	NCBI
mRatBN7.2	6	84,746,422 - 85,608,638 (-)	NCBI
Rnor_6.0	6	88,442,620 - 89,292,453 (-)	NCBI

Sequence:

show sequence

CGCGAGTTACTTTGTAAAGGCGAACCCGGGCGAGGGAGCCCCGCTTCGTGCCCGGGTCAGAGGC
CACTTCCTGCTCCCTGGCTGTCCAGCGCGGTTCGCATCGCGCGGCTACCCCGGGGCTTCTGCCC
GCTCCTGCCACTTGCCTGCGACCGGAGCCCGGAGCCGCTTCCCCAAAGAACACTTGTCCTCGCA
GCTCTGCTTCCCATCACCGCCCCCTGCTCCTCCCAGGCGTCTGCGATTTTTCCCAGGCGCCCGG
TGTGAGTGCGGCTTGCGTGTGAGTGCGTGTATCAGGGTATTGTGTAGTGGGAGTGTGTTCGCGC
GTGTGTGTGCTTGTACGTGTGTGTGCTTGTGCGTGTGTGAGTGTGTGAGTGAGTGTGTGTGTGT
GCGTGTGTGTGTGCACGAGTGTGGGGTGTGTGGGGCTCCAGTGCTCCGCTCACGGCCGCTGATA
GGGAAGGACAGACAGACAGCGCTTCCTCCCATTGCTAGCAGTTCCCGGGCACCTCGACTCGGCC
CGGGCACAAGTGGAGCGCGCCTTGCTGGCCGCTGCCCTCCAGAAGGTCCCACTGCGTCCCTCTT
GGGCTGGATATGTTCATGTTCACGTGAAGATGGATTTAGTGTACGGTCTCGTGTGGCTGCTGAC
AGTCCTCCTGGAGGGAATCTCTGGCCAAGGAGTGTACGCTCCCCCGACGGTTCGGATTGTGCAC
TCAGGATTGGCCTGTAATATAGAGGAGGAGCGCTACTCGGAAAGGGTCTATACCATCCGGGAAG
GAGAAACGCTAGAGTTGACCTGTCTGGTTACTGGACATCCACGCCCACAGATCAGGTGGACCAA
AACAGCAGGAAGCGCCTCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGATT
ACAAGCATTCAGAGACACCAAGGAGGCCGATATTACTGTAAAGCAGAGAATGGCTTGGGGTCTC
CAGCAATAAAGTCGATCCGAGTGGATGTGTACTACTTGGATGATCCTGTAGTAACTGTTCATCA
AAGTATAGGTGAAGCTAAAGAACAATTTTACTATGAGAGAACAGTGTTCCTCCGATGTGTGGCC
AATTCCAACCCCCCTGTGCGCTACAGCTGGAGACGTGGCCAAGAGGTGTTGCTACAAGGATCAG
ACAAAGGAGTGGAGATTTACGAGCCCTTTTTTACCCAGGGGGAAACAAAGATCTTAAAGCTAAA
GAATCTCCGACCTCAGGACTATGCTAACTACAGCTGCATTGCTTCAGTGAGGAACGTGTGTAAT
ATTCCAGACAAGATGGTGTCTTTTAGACTTTCCAATAAAACCGCTTCTCCGTCAATTAAGCTCT
TGGTGGATGACCCTATAGTTGTAAATCCTGGAGAGGCCATAACGTTAGTGTGTGTTACAACAGG
GGGAGAGCCTATGCCCTCTCTCACCTGGGTCAGGTCCTTCGGGACTCTGCCTGAAAAGATTGTT
TTGAATGGAGGGACATTGACCATACCTGCCATCACCTCTGATGATGCTGGGACTTACAGCTGCA
TTGCCAATAATAATGTGGGAAACCCTGCAAAAAAGTCCACCAACATCATTGTGAGAGCATTAAA
AAAAGGACGATTTTGGATCACTCCTGATCCTTATCACAAAGATGACAACATCCAGATTGGGCGT
GAGGTGAAAATATCTTGCCAAGTAGAAGCCGTTCCCTCTGAAGAGTTAACATTCAGTTGGTTTA
AAAACGGCCGTCCATTAAGAAGTTCTGAGCGGATGGTTATTACACAGACTGACCCTGATGTGTC
CCCCGGAACAACAAATTTGGATATCATTGATTTAAAATTCACGGACTTTGGGACTTACACATGC
GTGGCCTCTCTGAAGGGAGGAGGAATATCTGATATCAGTATTGACGTTAACATTTCCAGCAGCA
CAGTTCCACCCAATCTGACTGTTCCACAGGAAAAATCACCTTTGGTCACCAGAGAAGGGGACAC
AATAGAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGAT
AAAGAAGTTGCAATGCCTGATGGGACAATGCAAATGGAGAGTTATGATGGGACCCTCAGGATTG
TGAACGTGTCAAGGGAAATGTCTGGGATGTACAGATGCCAGACCAGTCAGTACAATGGATTCAA
CGTGAAGCCCAGAGAAGCCTTGGTGCAGCTCATCGTGCAGTATCCCCCAGCTGTGGAACCAGCA
TTCTTGGAAATCCGTCAAGGACAAGACAGAAGTGTGACCATGAGCTGTAGGGTTCTAAGAGCCT
ATCCGATACGTGTGCTGACTTACGAATGGCGTCTGGGCAATAAATTATTACGGACCGGTCAGTT
TGACTCTCAGGAGTATACTGAGTACCCACTAAAGAGTCTTTCCAATGAAAACTATGGAGTTTAT
AACTGCAGCATCATTAATGAAGCTGGAGCAGGGAGATGCAGCTTTCTTGTGACAGGAAAAGCCT
ATGCCCCAGAGTTCTACTATGACACCTACAACCCTGTGTGGCAGAACCGACACCGAGTGTATTC
TTACAGTCTGCAGTGGACACAAATGAATCCCGATGCAGTGGATCGGATTGTCGCATACCGTTTG
GGTATTCGGCAGGCTGGACAGCAACGTTGGTGGGAACAGGAGATTAAAATAAATGGGAATATTC
AAAAGGGAGAACTAATTACATATAACTTGACTGAACTTATAAAACCAGAGGCCTATGAAGTCCG
ACTGACTCCTCTCACTAAATTTGGTGAAGGAGATTCAACAATTCGTGTAATTAAATATACGGCA
CCTGTAAATCCTCATTTGAGAGAATTTCACTGTGGATTTGAAGATGGTAATATATGCTTATTCA
CCCAAGATGATACAGATAACTTTGACTGGACAAAGCAAAGTACTGCAACAAGAAATACAAAATA
CACCCCTAACACAGGTCCCAATGCAGATCGGAGTGGTTCCAAAGAAGGTTTTTATATGTACATC
GAGACATCGCGACCCAGACTAGAAGGAGAAAAGGCTCGACTTCTCAGCCCTGTATTCAGCATAG
CTCCCAAAAATCCATATGGACCTACCAATAGTGCATATTGTTTCAGTTTCTTCTATCACATGTA
TGGGCAACATATAGGTGTTTTAAATGTATATCTACGTTTGAAAGGGCAGACGACAATAGAGAAT
CCTCTATGGTCTTCGAGTGGGAACAAAGGACAACGATGGAATGAAGCTCATGTTAATATATATC
CAATTACTTCATTTCAGTTAATTTTTGAAGGCATTCGGGGTCCTGGGATAGAAGGTGACATCGC
CATTGACGATGTGTCAATTGCAGAAGGAGAATGTGCAAAACAAGACCTACCAACTAAGAATTCC
GTGGATGGTGCTGTTGGGATCTTAGTTCATATATGGCTTTTTCCAGTTATCATCCTCATCTCGA
TCTTAAGCCCTCGAAGGTGACCTTATCCTGGCAGAGGCTATAAATGATTCACCAGGCACTGGCA
TGAAGAAAGAGTCTTTGTAAATGGACACTGAAAAAACAAACTACCAAAGATTCCTCCACTGACT
ACTGACTCAAAAATTAAATAATAAGAACAACATTTTTTAAGCACTGGGGATAAAAAAAAGACAT
CTTGGAAATATAACTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGC
CCTTCAGGTGCTTTTGTGGCTAAAATGATTACAGCTTCATCTGGTTGAACTCTGGAAAAAGAAA
ATAAAAGAAAAAGAAAGAAAGAAAAAGAAGAAGAAGAAGAAAAAGAGCTATAGAAATCCTCGTC
AAAGCACAAAGTCATGGCTGGTTTTGTTTCAAATGAATAGTTTGCTTGTTACCATGGAAACCTA
ATGGCCTGCCAACAAAAACCTCACTGTAAACAGGGTACGTGGAGAGCTGGCGTTTATTTTCCTT
TCAAGAAGGTTTTATGTAGAGAATTAAATAAATGTAGGCCCTTTTACCTTGGCTGTTACCCTTC
CTTGAAAATACTCCAAACTCGGAATTATTTAAAGGTTTCATATCCCTGCCCGCCTTACCCCACC
CTACTTTTACTGTTGTTTGGGTTTTGTTGTCGTTGTTGTTGTTATTGTTGTTACTGTTTGTTGT
AGTTATTTTCTTTTTTCTTTTTTTTTCTCCCTCCCATGGCTAAGCTAGATAACTGTATGATGTC
TCTTTTTGCATGCACTGCTATCCAGGATGGTAAACCTGGGCTTACATATTACACAGGCTTATCG
GAGTTTGCTTGCGGCCACTTGACACCCAAACTACGTCATCTGTTCCTATGAAGAAACCAAACCA
CCATCTTTTATAAATTGCCATGGAAACCAAGTGCCTTCAATGAAACAAGCCTGAATAATTTTCA
ACTCAGAAGCTTGCACTGCTAACAATGGTTTGTGTAAAACTATTTTGTAACCAGACGACACAGC
CTAAATGTGCAAATTACAGGCAAGACACCCTAGCCGCTTCTGAAGAAGAAAGGACCGACGTGCT
GCGTAAACCTACGCAGACAAGATTATTTGTTTCACCTCCTAGACAGCCATGGCCTTTCGGCTTA
ATGTCCATAGAAAGTAACTTCCATTGAGACCAAACATGGGAGCAACACTTTTTTCTTCCAGGTT
ATTAATGGGTCAACCAGAGCAAAAGGTTGTTGAGATAATACTTAGCACAGAAGGTGGTAAAACA
CAGAAGTGATTTTTTACTCTAACCTCCATTTCAAATGAGATTGGCTTTGCCTTTAGAGGGAACA
AGGAAATGTTTGCGATTGCCGTGCATACAAACTCTGCCGCGGAACTGGGCCTGAAAAAAATCTG
CCTTTATTCTAAACACTGAGGGGAATAGGCCTCTGCCCTTTAGTCAGACTCTGTGCAAATTGTG
AAATATTATTTTATTATTTTAACAAGATTAAAAAACACTTTTACAAAAAAACAAAAACCTGTAA
AAATGATTTTGAGCTACCTGAGGACAAACCATAACTTTAACCAGCCAGTTTTCCAATGCATTGT
AAATTTCACTTAAACCTGTTGGTTATGACAATTTGAAGATCTTTTTCCTTAAATTATCACAACT
TTTAACTTCATTTAAAAAAGACTTTTGTCTAAAGAAGAATATTATTATTATCTGTTCTTTCAAC
ACCCCAGGATTTAAAAAAAATACTGATTATGCAAGTAATTGGGATCTAAGTATTAAATTGCAGC
ATTTGCAAATATTAATATAAAAAGCACAACAAAATGTAGTGGAAATGACAAAGCTTGATTTTTT
AAAACAACTGTAGAGATGTTTGTGCAAATTCAATAATTCAACTTAAAATATAATTTTACAGCTC
TGTTCAATAAAGCCTCTTTCCAGGTAAGGTATGAGAAACAGTGTGTGTGTTTGTTGGGCAATAG
TCACCCTTTCATTTAATGAGATTAGTTATGCAATTTACTGGTTTTATTATCTTGGGATAAATCT
TCAGTTCTTCATACACAGTTAATGTTTGCAGGAACAAATTTGAAAAAAACACACCATGTATTCT
CCTTTTATTTTTGTTAAACCTGTTAAAATGTTGTACCTCTGTAGGTAAAATGCAAACCGAAATA
CAAGTGGAAATTTACTATCAAATTTCATAGTCAGCTCAAAAGGGGACATATCAGAATAATTACA
TAGGGATAGAATCAAAATAACCTGTGTCCCATAAATCACACAAAGGAGGCAAATGATTAACCTA
ATTTATTTTAATTAATTAGTTATATTGAAAATCCTTTTTAAATTTCCAAGTCATCCATCTAGTT
TCTCAAATCAAAGATTTACAGTAGGTAATATCTGGGCACTTAGCATGGGAAAGATCTGCATTCA
CCTGCATGTCCGCCATATTGCCACCAACAATAGTTCTGCACTACCCAGGACGAGTAAAAAACAA
ATTCATTAGGTCTTACTTTTTGCATTCTCTCTGCCAGGTCGACAGTACGTGTCTTCTGTTTAAA
GAGAGGCTCGACTTGTTATCTTCTTTCAATTACGTTTAAGTTGATTTGAGTGAGGCTTTTGTAA
ATGAATTTAAAGGAAAAAGACCCCTAAATTCTGAATATCGGAAGGCATACATGTCACTTCAAGA
TAACTTAGTTTTTTTTTCTCCTTCTCAGTTATCCTGAGCAAAGAAGTCGATATGAAAGTTTCAG
TTGTGTCATTAAAGCATTTATCGAACGTAAAAATCTTTCCTAAATTTTCACATAGTAAGAGAAC
ACACTCTGGAAGTTAAAGAGAACTGGCTGGTACTTCAAAATTAATTTTTATTAAACTTCTAAGA
AGTTGCAGATGGTTGTGACGAACACGGGACTATCAGAGGTGAGAGCAGGTGGACGAGAGAGGTG
GAGAGAAACACAATTTCTCACATGAGAGTCACATCATTTAGACTCGCCAATCAACATAATCACT
GTTTTTACATCAGATCAAATGCTCAGTTGCTTTAATGAAAGTAAATGGCTAAAACTGTGGAAAG
TTCTAAATGAGTTGGATACATGAACTGGAAACATTGTGAAATCACCTTGTCTTTAGTAGAAGAA
ATGATGGTGGAACCCTTAAACACCTTCCCATTCCTAACATTGTTATGTTTATCAGAACTGCACC
CACTGCCACCTTCACCTTACCATTTTGCTAATGTGTCAGCATATAATTTGAGAGGCCTGTTCGG
TTCTTTTCTTCTTTTTTTTTTAATGGGGAAGCATTTAGCAATCAGGGTTTTATTTTTGGGAGAA
ACAACATGCTGTGTAATCTCCAGTTACTCACAATAACTGATCCGCGTTAGTTAGGAGTGGTACC
ACTTTCATGGGTTCAGTGATGTTTCTTCACAGGCTAACATTTCTACAGTTGTGTCGACTTTCAT
TGCAGTTAGCAGCACTCTCATGTAGTGATATGAACATGCACACGGGAGCTGAGAAGACCTGAGT
AAGAACATGTAACACTTTGACGAAAGTTGCCAGAATGGTCAAACAATGCCAAATATGATATTTC
CTTGGGAGCTAAGAGTGAGAAAAAATATTGCCCAATCACACTTATCAGATGTATAAATAATCAT
GGACTATGCAGTTTTGAAAAAAAATAACCTACTTACCTTTCTTTTAAAATGTTTTTTTTAAAGA
TGCTTTGCATACATACCTACCCCTGCTTTTCCATTTCCTACCTACTTTTCTGTCTTGTGTTTTT
ATAGTTCCATCCTGGAAATATGTATCCCTGGTCTGCTGTGCTCCCAGGTTCCATAGGGCTTGTA
TTCAACAGATCATGAGTTTGGCCCATGATCAGTTCCTTTAAGAGAACTGATAGATGCTTGGTTA
CAATGTCAGGCAGTGGACCTTGACACTAGTGGCACTTCACTTCACATTTCCCCCAGAATTGGCT
CAGCATAACAATGGATTATATCTGAATTAGGACCTAACTAGTCTGTTATACCATGTAATATACA
GTGAAAATAATTCCATTCTTTACTTGGACATATGATAAAATATAAATTACAGCTGTACTAACTT
TTCATCAAACATGCAATATTATTTTAAATACTTTATAATAATAAACTTATCTGCCAATGAAATG
TGTAATTTGAATAATAATTCATTCATTTCTATACTTGAGACTCTAAACATGACTGTGGTATTAC
TCAGAATCATTTAATTTTGTTTCTCTTGGTAATTTTAAATTTGTGATAAATTGATTTGATTTTG
GAAAAACTTTTCAAATGATCCTCCTAAATTTGTGATTTATGTTCCTTATTACAGAACATTTTTT
TTCTGTGCCTTTCAAATATCAGGGCCACTGAAATAGACATTTAAACTGGAAAAAATTGACCTTC
CCCAAATACATTCTAAATTAATACGACATTCAGCCGTGTCTCAACAAAGCAGAGGGTGTACTCT
TCTTGCAACTGGGCAGTTGATCTCAATGAGGAGTTATTGCATTTTCTGTGAAAACAATAAAGTC
ATAGGGTTCAATCCCAAGCTGCTGCTTTTCCTACAGCATTCCCTCTGTGGCTAGCCCATTTAAC
TCATTTTCTTAGCATTGTTTTTAGAAAGGAATGTCTGTCCTTTTCTACTGTCTTAGAAGGAAAA
TTGCTACAAAATAATTTGATTTTTTTCTCAAATCTCATAGAAAGTTTGTTGTATATTCATAGTA
TATCTACATACAATTGTGTATGTTATTACGTGAGCAGTGAAAAACATAAACGCTTGACACTATA
ATGGGAAGCATGACAGCCAAGAAAGTCCCTAGTGGATTACTTAATGTCTGTTGGAATAGAAGTG
AGAAATTATGGTAAAGCTTCCACATTTCTATAGGAATTACTTTTTGAGCATATGGCCGTTTGAA
GGTTAATAAGACTGTGAGCAGTGGTTTCACTGCTCTGAACCCATATTGAGAATCTCAAACTGGA
ATCCAAAATTTGGAATAGGGCTGAGGTTAAACTCTGGGTAGAAACTGCAATAGTTTTCTCAAGG
ATATATTTGCAACTGATTGAATTTAATTTCAACAGTACTAATTTTCCATGAGTTTATTTGAAAT
GTGTTCTTATTTTTCAAGCGTCGGGAAATTCTATGAGTAGGGCTAAGCTTGGTAGTTTCGCTGG
TTTTCTTGTGGCTCTTTATTGTTGTCCTGGCGCTCCAGGCTTCCCTTTTTATTTCTTGAGTCTC
ACCAGTATATTTAAATGTATAAGTTTAATCAAATATGCATTGTGTTAAATTTATATAAAACATT
GGAGACCATAAAATTTAGATTGAACTTAATTTACATTTTGATATTTTCCTTCTTCCAAATAGTT
TCAGATAGCTGTATGTTATTTTCCTTGGAATTTTTTTCAATAAATGAAATTATGTTAAATACTC

hide sequence

RefSeq Acc Id:

XM_039112248 ⟹ XP_038968176

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	90,503,294 - 91,346,784 (-)	NCBI
mRatBN7.2	6	84,767,112 - 85,608,640 (-)	NCBI

RefSeq Acc Id:

XR_001838167

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	90,482,687 - 91,346,784 (-)	NCBI
mRatBN7.2	6	84,746,422 - 85,608,638 (-)	NCBI
Rnor_6.0	6	88,442,620 - 89,292,453 (-)	NCBI

Sequence:

show sequence

CGCGAGTTACTTTGTAAAGGCGAACCCGGGCGAGGGAGCCCCGCTTCGTGCCCGGGTCAGAGGC
CACTTCCTGCTCCCTGGCTGTCCAGCGCGGTTCGCATCGCGCGGCTACCCCGGGGCTTCTGCCC
GCTCCTGCCACTTGCCTGCGACCGGAGCCCGGAGCCGCTTCCCCAAAGAACACTTGTCCTCGCA
GCTCTGCTTCCCATCACCGCCCCCTGCTCCTCCCAGGCGTCTGCGATTTTTCCCAGGCGCCCGG
TGTGAGTGCGGCTTGCGTGTGAGTGCGTGTATCAGGGTATTGTGTAGTGGGAGTGTGTTCGCGC
GTGTGTGTGCTTGTACGTGTGTGTGCTTGTGCGTGTGTGAGTGTGTGAGTGAGTGTGTGTGTGT
GCGTGTGTGTGTGCACGAGTGTGGGGTGTGTGGGGCTCCAGTGCTCCGCTCACGGCCGCTGATA
GGGAAGGACAGACAGACAGCGCTTCCTCCCATTGCTAGCAGTTCCCGGGCACCTCGACTCGGCC
CGGGCACAAGTGGAGCGCGCCTTGCTGGCCGCTGCCCTCCAGAAGGTCCCACTGCGTCCCTCTT
GGGCTGGATATGTTCATGTTCACGTGAAGATGGATTTAGTGTACGGTCTCGTGTGGCTGCTGAC
AGTCCTCCTGGAGGGAATCTCTGGCCAAGGAGTGTACGCTCCCCCGACGGTTCGGATTGTGCAC
TCAGGATTGGCCTGTAATATAGAGGAGGAGCGCTACTCGGAAAGGGTCTATACCATCCGGGAAG
GAGAAACGCTAGAGTTGACCTGTCTGGTTACTGGACATCCACGCCCACAGATCAGGTGGACCAA
AACAGCAGGAAGCGCCTCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGATT
ACAAGCATTCAGAGACACCAAGGAGGCCGATATTACTGTAAAGCAGAGAATGGCTTGGGGTCTC
CAGCAATAAAGTCGATCCGAGTGGATGTGTACTACTTGGATGATCCTGTAGTAACTGTTCATCA
AAGTATAGGTGAAGCTAAAGAACAATTTTACTATGAGAGAACAGTGTTCCTCCGATGTGTGGCC
AATTCCAACCCCCCTGTGCGCTACAGCTGGAGACGTGGCCAAGAGGTGTTGCTACAAGGATCAG
ACAAAGGAGTGGAGATTTACGAGCCCTTTTTTACCCAGGGGGAAACAAAGATCTTAAAGCTAAA
GAATCTCCGACCTCAGGACTATGCTAACTACAGCTGCATTGCTTCAGTGAGGAACGTGTGTAAT
ATTCCAGACAAGATGGTGTCTTTTAGACTTTCCAATAAAACCGCTTCTCCGTCAATTAAGCTCT
TGGTGGATGACCCTATAGTTGTAAATCCTGGAGAGGCCATAACGTTAGTGTGTGTTACAACAGG
GGGAGAGCCTATGCCCTCTCTCACCTGGGTCAGGTCCTTCGGGACTCTGCCTGAAAAGATTGTT
TTGAATGGAGGGACATTGACCATACCTGCCATCACCTCTGATGATGCTGGGACTTACAGCTGCA
TTGCCAATAATAATGTGGGAAACCCTGCAAAAAAGTCCACCAACATCATTGTGAGAGCATTAAA
AAAAGGACGATTTTGGATCACTCCTGATCCTTATCACAAAGATGACAACATCCAGATTGGGCGT
GAGGTGAAAATATCTTGCCAAGTAGAAGCCGTTCCCTCTGAAGAGTTAACATTCAGTTGGTTTA
AAAACGGCCGTCCATTAAGAAGTTCTGAGCGGATGGTTATTACACAGACTGACCCTGATGTGTC
CCCCGGAACAACAAATTTGGATATCATTGATTTAAAATTCACGGACTTTGGGACTTACACATGC
GTGGCCTCTCTGAAGGGAGGAGGAATATCTGATATCAGTATTGACGTTAACATTTCCAGCAGCA
CAGTTCCACCCAATCTGACTGTTCCACAGGAAAAATCACCTTTGGTCACCAGAGAAGGGGACAC
AATAGAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGAT
AAAGAAGTTGCAATGCCTGATGGGACAATGCAAATGGAGAGTTATGATGGGACCCTCAGGATTG
TGAACGTGTCAAGGGAAATGTCTGGGATGTACAGATGCCAGACCAGTCAGTACAATGGATTCAA
CGTGAAGCCCAGAGAAGCCTTGGTGCAGCTCATCGTGCAGTATCCCCCAGCTGTGGAACCAGCA
TTCTTGGAAATCCGTCAAGGACAAGACAGAAGTGTGACCATGAGCTGTAGGGTTCTAAGAGCCT
ATCCGATACGTGTGCTGACTTACGAATGGCGTCTGGGCAATAAATTATTACGGACCGGTCAGTT
TGACTCTCAGGAGTATACTGAGTACCCACTAAAGAGTCTTTCCAATGAAAACTATGGAGTTTAT
AACTGCAGCATCATTAATGAAGCTGGAGCAGGGAGATGCAGCTTTCTTGTGACAGGAAAAGCCT
ATGCCCCAGAGTTCTACTATGACACCTACAACCCTGTGTGGCAGAACCGACACCGAGTGTATTC
TTACAGTCTGCAGTGGACACAAATGAATCCCGATGCAGTGGATCGGATTGTCGCATACCGTTTG
GGTATTCGGCAGGCTGGACAGCAACGTTGGTGGGAACAGGAGATTAAAATAAATGGGAATATTC
AAAAGGGAGAACTAATTACATATAACTTGACTGAACTTATAAAACCAGAGGCCTATGAAGTCCG
ACTGACTCCTCTCACTAAATTTGGTGAAGGAGATTCAACAATTCGTGTAATTAAATATACGGCA
CCTGTAAATCCTCATTTGAGAGAATTTCACTGTGGATTTGAAGATGGTAATATATGCTTATTCA
CCCAAGATGATACAGATAACTTTGACTGGACAAAGCAAAGTACTGCAACAAGAAATACAAAATA
CACCCCTAACACAGGTCCCAATGCAGATCGGAGTGGTTCCAAAGAAGGTTTTTATATGTACATC
GAGACATCGCGACCCAGACTAGAAGGAGAAAAGGCTCGACTTCTCAGCCCTGTATTCAGCATAG
CTCCCAAAAATCCATATGGACCTACCAATAGTGCATATTGTTTCAGTTTCTTCTATCACATGTA
TGGGCAACATATAGGTGTTTTAAATGTATATCTACGTTTGAAAGGGCAGACGACAATAGAGAAT
CCTCTATGGTCTTCGAGTGGGAACAAAGGACAACGATGGAATGAAGCTCATGTTAATATATATC
CAATTACTTCATTTCAGTTAATTTTTGAAGGCATTCGGGGTCCTGGGATAGAAGGTGACATCGC
CATTGACGATGTGTCAATTGCAGAAGGAGAATGTGCAAAACAAGACCTACCAACTAAGAATTCC
GTGGATGGTGCTGTTGGGATCTTAGTTCATATATGGCTTTTTCCAGTTATCATCCTCATCTCGA
TCTTAAGCCCTCGAAGGTGACCTTATCCTGGCAGAGGCTATAAATGATTCACCAGGCACTGGCA
TGAAGAAAGAGTCTTTGTAAATGGACACTGAAAAAACAAACTACCAAAGATTCCTCCACTGACT
ACTGACTCAAAAATTAAATAATAAGAACAACATTTTTTAAGCACTGGGGATAAAAAAAAGACAT
CTTGGAAATATAACTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGC
CCTTCAGGTGCTTTTGTGGCTAAAATGATTACAGCTTCATCTGGTTGAACTCTGGAAAAAGAAA
ATAAAAGAAAAAGAAAGAAAGAAAAAGAAGAAGAAGAAGAAAAAGAGCTATAGAAATCCTCGTC
AAAGCACAAAGTCATGGCTGGTTTTGTTTCAAATGAATAGTTTGCTTGTTACCATGGAAACCTA
ATGGCCTGCCAACAAAAACCTCACTGTAAACAGGGATGGTAAACCTGGGCTTACATATTACACA
GGCTTATCGGAGTTTGCTTGCGGCCACTTGACACCCAAACTACGTCATCTGTTCCTATGAAGAA
ACCAAACCACCATCTTTTATAAATTGCCATGGAAACCAAGTGCCTTCAATGAAACAAGCCTGAA
TAATTTTCAACTCAGAAGCTTGCACTGCTAACAATGGTTTGTGTAAAACTATTTTGTAACCAGA
CGACACAGCCTAAATGTGCAAATTACAGGCAAGACACCCTAGCCGCTTCTGAAGAAGAAAGGAC
CGACGTGCTGCGTAAACCTACGCAGACAAGATTATTTGTTTCACCTCCTAGACAGCCATGGCCT
TTCGGCTTAATGTCCATAGAAAGTAACTTCCATTGAGACCAAACATGGGAGCAACACTTTTTTC
TTCCAGGTTATTAATGGGTCAACCAGAGCAAAAGGTTGTTGAGATAATACTTAGCACAGAAGGT
GGTAAAACACAGAAGTGATTTTTTACTCTAACCTCCATTTCAAATGAGATTGGCTTTGCCTTTA
GAGGGAACAAGGAAATGTTTGCGATTGCCGTGCATACAAACTCTGCCGCGGAACTGGGCCTGAA
AAAAATCTGCCTTTATTCTAAACACTGAGGGGAATAGGCCTCTGCCCTTTAGTCAGACTCTGTG
CAAATTGTGAAATATTATTTTATTATTTTAACAAGATTAAAAAACACTTTTACAAAAAAACAAA
AACCTGTAAAAATGATTTTGAGCTACCTGAGGACAAACCATAACTTTAACCAGCCAGTTTTCCA
ATGCATTGTAAATTTCACTTAAACCTGTTGGTTATGACAATTTGAAGATCTTTTTCCTTAAATT
ATCACAACTTTTAACTTCATTTAAAAAAGACTTTTGTCTAAAGAAGAATATTATTATTATCTGT
TCTTTCAACACCCCAGGATTTAAAAAAAATACTGATTATGCAAGTAATTGGGATCTAAGTATTA
AATTGCAGCATTTGCAAATATTAATATAAAAAGCACAACAAAATGTAGTGGAAATGACAAAGCT
TGATTTTTTAAAACAACTGTAGAGATGTTTGTGCAAATTCAATAATTCAACTTAAAATATAATT
TTACAGCTCTGTTCAATAAAGCCTCTTTCCAGGTAAGGTATGAGAAACAGTGTGTGTGTTTGTT
GGGCAATAGTCACCCTTTCATTTAATGAGATTAGTTATGCAATTTACTGGTTTTATTATCTTGG
GATAAATCTTCAGTTCTTCATACACAGTTAATGTTTGCAGGAACAAATTTGAAAAAAACACACC
ATGTATTCTCCTTTTATTTTTGTTAAACCTGTTAAAATGTTGTACCTCTGTAGGTAAAATGCAA
ACCGAAATACAAGTGGAAATTTACTATCAAATTTCATAGTCAGCTCAAAAGGGGACATATCAGA
ATAATTACATAGGGATAGAATCAAAATAACCTGTGTCCCATAAATCACACAAAGGAGGCAAATG
ATTAACCTAATTTATTTTAATTAATTAGTTATATTGAAAATCCTTTTTAAATTTCCAAGTCATC
CATCTAGTTTCTCAAATCAAAGATTTACAGTAGGTAATATCTGGGCACTTAGCATGGGAAAGAT
CTGCATTCACCTGCATGTCCGCCATATTGCCACCAACAATAGTTCTGCACTACCCAGGACGAGT
AAAAAACAAATTCATTAGGTCTTACTTTTTGCATTCTCTCTGCCAGGTCGACAGTACGTGTCTT
CTGTTTAAAGAGAGGCTCGACTTGTTATCTTCTTTCAATTACGTTTAAGTTGATTTGAGTGAGG
CTTTTGTAAATGAATTTAAAGGAAAAAGACCCCTAAATTCTGAATATCGGAAGGCATACATGTC
ACTTCAAGATAACTTAGTTTTTTTTTCTCCTTCTCAGTTATCCTGAGCAAAGAAGTCGATATGA
AAGTTTCAGTTGTGTCATTAAAGCATTTATCGAACGTAAAAATCTTTCCTAAATTTTCACATAG
TAAGAGAACACACTCTGGAAGTTAAAGAGAACTGGCTGGTACTTCAAAATTAATTTTTATTAAA
CTTCTAAGAAGTTGCAGATGGTTGTGACGAACACGGGACTATCAGAGGTGAGAGCAGGTGGACG
AGAGAGGTGGAGAGAAACACAATTTCTCACATGAGAGTCACATCATTTAGACTCGCCAATCAAC
ATAATCACTGTTTTTACATCAGATCAAATGCTCAGTTGCTTTAATGAAAGTAAATGGCTAAAAC
TGTGGAAAGTTCTAAATGAGTTGGATACATGAACTGGAAACATTGTGAAATCACCTTGTCTTTA
GTAGAAGAAATGATGGTGGAACCCTTAAACACCTTCCCATTCCTAACATTGTTATGTTTATCAG
AACTGCACCCACTGCCACCTTCACCTTACCATTTTGCTAATGTGTCAGCATATAATTTGAGAGG
CCTGTTCGGTTCTTTTCTTCTTTTTTTTTTAATGGGGAAGCATTTAGCAATCAGGGTTTTATTT
TTGGGAGAAACAACATGCTGTGTAATCTCCAGTTACTCACAATAACTGATCCGCGTTAGTTAGG
AGTGGTACCACTTTCATGGGTTCAGTGATGTTTCTTCACAGGCTAACATTTCTACAGTTGTGTC
GACTTTCATTGCAGTTAGCAGCACTCTCATGTAGTGATATGAACATGCACACGGGAGCTGAGAA
GACCTGAGTAAGAACATGTAACACTTTGACGAAAGTTGCCAGAATGGTCAAACAATGCCAAATA
TGATATTTCCTTGGGAGCTAAGAGTGAGAAAAAATATTGCCCAATCACACTTATCAGATGTATA
AATAATCATGGACTATGCAGTTTTGAAAAAAAATAACCTACTTACCTTTCTTTTAAAATGTTTT
TTTTAAAGATGCTTTGCATACATACCTACCCCTGCTTTTCCATTTCCTACCTACTTTTCTGTCT
TGTGTTTTTATAGTTCCATCCTGGAAATATGTATCCCTGGTCTGCTGTGCTCCCAGGTTCCATA
GGGCTTGTATTCAACAGATCATGAGTTTGGCCCATGATCAGTTCCTTTAAGAGAACTGATAGAT
GCTTGGTTACAATGTCAGGCAGTGGACCTTGACACTAGTGGCACTTCACTTCACATTTCCCCCA
GAATTGGCTCAGCATAACAATGGATTATATCTGAATTAGGACCTAACTAGTCTGTTATACCATG
TAATATACAGTGAAAATAATTCCATTCTTTACTTGGACATATGATAAAATATAAATTACAGCTG
TACTAACTTTTCATCAAACATGCAATATTATTTTAAATACTTTATAATAATAAACTTATCTGCC
AATGAAATGTGTAATTTGAATAATAATTCATTCATTTCTATACTTGAGACTCTAAACATGACTG
TGGTATTACTCAGAATCATTTAATTTTGTTTCTCTTGGTAATTTTAAATTTGTGATAAATTGAT
TTGATTTTGGAAAAACTTTTCAAATGATCCTCCTAAATTTGTGATTTATGTTCCTTATTACAGA
ACATTTTTTTTCTGTGCCTTTCAAATATCAGGGCCACTGAAATAGACATTTAAACTGGAAAAAA
TTGACCTTCCCCAAATACATTCTAAATTAATACGACATTCAGCCGTGTCTCAACAAAGCAGAGG
GTGTACTCTTCTTGCAACTGGGCAGTTGATCTCAATGAGGAGTTATTGCATTTTCTGTGAAAAC
AATAAAGTCATAGGGTTCAATCCCAAGCTGCTGCTTTTCCTACAGCATTCCCTCTGTGGCTAGC
CCATTTAACTCATTTTCTTAGCATTGTTTTTAGAAAGGAATGTCTGTCCTTTTCTACTGTCTTA
GAAGGAAAATTGCTACAAAATAATTTGATTTTTTTCTCAAATCTCATAGAAAGTTTGTTGTATA
TTCATAGTATATCTACATACAATTGTGTATGTTATTACGTGAGCAGTGAAAAACATAAACGCTT
GACACTATAATGGGAAGCATGACAGCCAAGAAAGTCCCTAGTGGATTACTTAATGTCTGTTGGA
ATAGAAGTGAGAAATTATGGTAAAGCTTCCACATTTCTATAGGAATTACTTTTTGAGCATATGG
CCGTTTGAAGGTTAATAAGACTGTGAGCAGTGGTTTCACTGCTCTGAACCCATATTGAGAATCT
CAAACTGGAATCCAAAATTTGGAATAGGGCTGAGGTTAAACTCTGGGTAGAAACTGCAATAGTT
TTCTCAAGGATATATTTGCAACTGATTGAATTTAATTTCAACAGTACTAATTTTCCATGAGTTT
ATTTGAAATGTGTTCTTATTTTTCAAGCGTCGGGAAATTCTATGAGTAGGGCTAAGCTTGGTAG
TTTCGCTGGTTTTCTTGTGGCTCTTTATTGTTGTCCTGGCGCTCCAGGCTTCCCTTTTTATTTC
TTGAGTCTCACCAGTATATTTAAATGTATAAGTTTAATCAAATATGCATTGTGTTAAATTTATA
TAAAACATTGGAGACCATAAAATTTAGATTGAACTTAATTTACATTTTGATATTTTCCTTCTTC
CAAATAGTTTCAGATAGCTGTATGTTATTTTCCTTGGAATTTTTTTCAATAAATGAAATTATGT
TAAATACTC

hide sequence

RefSeq Acc Id:

XR_001838168

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	90,482,687 - 91,346,784 (-)	NCBI
mRatBN7.2	6	84,746,422 - 85,608,638 (-)	NCBI
Rnor_6.0	6	88,442,620 - 89,292,453 (-)	NCBI

Sequence:

show sequence

CGCGAGTTACTTTGTAAAGGCGAACCCGGGCGAGGGAGCCCCGCTTCGTGCCCGGGTCAGAGGC
CACTTCCTGCTCCCTGGCTGTCCAGCGCGGTTCGCATCGCGCGGCTACCCCGGGGCTTCTGCCC
GCTCCTGCCACTTGCCTGCGACCGGAGCCCGGAGCCGCTTCCCCAAAGAACACTTGTCCTCGCA
GCTCTGCTTCCCATCACCGCCCCCTGCTCCTCCCAGGCGTCTGCGATTTTTCCCAGGCGCCCGG
TGTGAGTGCGGCTTGCGTGTGAGTGCGTGTATCAGGGTATTGTGTAGTGGGAGTGTGTTCGCGC
GTGTGTGTGCTTGTACGTGTGTGTGCTTGTGCGTGTGTGAGTGTGTGAGTGAGTGTGTGTGTGT
GCGTGTGTGTGTGCACGAGTGTGGGGTGTGTGGGGCTCCAGTGCTCCGCTCACGGCCGCTGATA
GGGAAGGACAGACAGACAGCGCTTCCTCCCATTGCTAGCAGTTCCCGGGCACCTCGACTCGGCC
CGGGCACAAGTGGAGCGCGCCTTGCTGGCCGCTGCCCTCCAGAAGGTCCCACTGCGTCCCTCTT
GGGCTGGATATGTTCATGTTCACGTGAAGATGGATTTAGTGTACGGTCTCGTGTGGCTGCTGAC
AGTCCTCCTGGAGGGAATCTCTGGCCAAGGAGTGTACGCTCCCCCGACGGTTCGGATTGTGCAC
TCAGGATTGGCCTGTAATATAGAGGAGGAGCGCTACTCGGAAAGGGTCTATACCATCCGGGAAG
GAGAAACGCTAGAGTTGACCTGTCTGGTTACTGGACATCCACGCCCACAGATCAGGTGGACCAA
AACAGCAGGAAGCGCCTCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGATT
ACAAGCATTCAGAGACACCAAGGAGGCCGATATTACTGTAAAGCAGAGAATGGCTTGGGGTCTC
CAGCAATAAAGTCGATCCGAGTGGATGTGTACTACTTGGATGATCCTGTAGTAACTGTTCATCA
AAGTATAGGTGAAGCTAAAGAACAATTTTACTATGAGAGAACAGTGTTCCTCCGATGTGTGGCC
AATTCCAACCCCCCTGTGCGCTACAGCTGGAGACGTGGCCAAGAGGTGTTGCTACAAGGATCAG
ACAAAGGAGTGGAGATTTACGAGCCCTTTTTTACCCAGGGGGAAACAAAGATCTTAAAGCTAAA
GAATCTCCGACCTCAGGACTATGCTAACTACAGCTGCATTGCTTCAGTGAGGAACGTGTGTAAT
ATTCCAGACAAGATGGTGTCTTTTAGACTTTCCAATAAAACCGCTTCTCCGTCAATTAAGCTCT
TGGTGGATGACCCTATAGTTGTAAATCCTGGAGAGGCCATAACGTTAGTGTGTGTTACAACAGG
GGGAGAGCCTATGCCCTCTCTCACCTGGGTCAGGTCCTTCGGGACTCTGCCTGAAAAGATTGTT
TTGAATGGAGGGACATTGACCATACCTGCCATCACCTCTGATGATGCTGGGACTTACAGCTGCA
TTGCCAATAATAATGTGGGAAACCCTGCAAAAAAGTCCACCAACATCATTGTGAGAGCATTAAA
AAAAGGACGATTTTGGATCACTCCTGATCCTTATCACAAAGATGACAACATCCAGATTGGGCGT
GAGGTGAAAATATCTTGCCAAGTAGAAGCCGTTCCCTCTGAAGAGTTAACATTCAGTTGGTTTA
AAAACGGCCGTCCATTAAGAAGTTCTGAGCGGATGGTTATTACACAGACTGACCCTGATGTGTC
CCCCGGAACAACAAATTTGGATATCATTGATTTAAAATTCACGGACTTTGGGACTTACACATGC
GTGGCCTCTCTGAAGGGAGGAGGAATATCTGATATCAGTATTGACGTTAACATTTCCAGCAGCA
CAGTTCCACCCAATCTGACTGTTCCACAGGAAAAATCACCTTTGGTCACCAGAGAAGGGGACAC
AATAGAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGAT
AAAGAAGTTGCAATGCCTGATGGGACAATGCAAATGGAGAGTTATGATGGGACCCTCAGGATTG
TGAACGTGTCAAGGGAAATGTCTGGGATGTACAGATGCCAGACCAGTCAGTACAATGGATTCAA
CGTGAAGCCCAGAGAAGCCTTGGTGCAGCTCATCGTGCAGTATCCCCCAGCTGTGGAACCAGCA
TTCTTGGAAATCCGTCAAGGACAAGACAGAAGTGTGACCATGAGCTGTAGGGTTCTAAGAGCCT
ATCCGATACGTGTGCTGACTTACGAATGGCGTCTGGGCAATAAATTATTACGGACCGGTCAGTT
TGACTCTCAGGAGTATACTGAGTACCCACTAAAGAGTCTTTCCAATGAAAACTATGGAGTTTAT
AACTGCAGCATCATTAATGAAGCTGGAGCAGGGAGATGCAGCTTTCTTGTGACAGGAAAAGCCT
ATGCCCCAGAGTTCTACTATGACACCTACAACCCTGTGTGGCAGAACCGACACCGAGTGTATTC
TTACAGTCTGCAGTGGACACAAATGAATCCCGATGCAGTGGATCGGATTGTCGCATACCGTTTG
GGTATTCGGCAGGCTGGACAGCAACGTTGGTGGGAACAGGAGATTAAAATAAATGGGAATATTC
AAAAGGGAGAACTAATTACATATAACTTGACTGAACTTATAAAACCAGAGGCCTATGAAGTCCG
ACTGACTCCTCTCACTAAATTTGGTGAAGGAGATTCAACAATTCGTGTAATTAAATATACGGCA
CCTGTAAATCCTCATTTGAGAGAATTTCACTGTGGATTTGAAGATGGTAATATATGCTTATTCA
CCCAAGATGATACAGATAACTTTGACTGGACAAAGCAAAGTACTGCAACAAGAAATACAAAATA
CACCCCTAACACAGGTCCCAATGCAGATCGGAGTGGTTCCAAAGAAGGTTTTTATATGTACATC
GAGACATCGCGACCCAGACTAGAAGGAGAAAAGGCTCGACTTCTCAGCCCTGTATTCAGCATAG
CTCCCAAAAATCCATATGGACCTACCAATAGTGCATATTGTTTCAGTTTCTTCTATCACATGTA
TGGGCAACATATAGGTGTTTTAAATGTATATCTACGTTTGAAAGGGCAGACGACAATAGAGAAT
CCTCTATGGTCTTCGAGTGGGAACAAAGGACAACGATGGAATGAAGCTCATGTTAATATATATC
CAATTACTTCATTTCAGTTAATTTTTGAAGGCATTCGGGGTCCTGGGATAGAAGGTGACATCGC
CATTGACGATGTGTCAATTGCAGAAGGAGAATGTGCAAAACAAGACCTACCAACTAAGAATTCC
GTGGATGGTGCTGTTGGGATCTTAGTTCATATATGGCTTTTTCCAGTTATCATCCTCATCTCGA
TCTTAAGCCCTCGAAGGTGACCTTATCCTGGCAGAGGCTATAAATGATTCACCAGGCACTGGCA
TGAAGAAAGAGTCTTTGTAAATGGACACTGAAAAAACAAACTACCAAAGATTCCTCCACTGACT
ACTGACTCAAAAATTAAATAATAAGAACAACATTTTTTAAGCACTGGGGATAAAAAAAAGACAT
CTTGGAAATATAACTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGC
CCTTCAGGTGCTTTTGTGGCTAAAATGATTACAGCTTCATCTGGTTGAACTCTGGAAAAAGAAA
ATAAAAGAAAAAGAAAGAAAGAAAAAGAAGAAGAAGAAGAAAAAGAGCTATAGAAATCCTCGTC
AAAGCACAAAGTCATGGCTGGTTTTGTTTCAAATGAATAGTTTGCTTGTTACCATGGAAACCTA
ATGGCCTGCCAACAAAAACCTCACTGTAAACAGGGCTTATCGGAGTTTGCTTGCGGCCACTTGA
CACCCAAACTACGTCATCTGTTCCTATGAAGAAACCAAACCACCATCTTTTATAAATTGCCATG
GAAACCAAGTGCCTTCAATGAAACAAGCCTGAATAATTTTCAACTCAGAAGCTTGCACTGCTAA
CAATGGTTTGTGTAAAACTATTTTGTAACCAGACGACACAGCCTAAATGTGCAAATTACAGGCA
AGACACCCTAGCCGCTTCTGAAGAAGAAAGGACCGACGTGCTGCGTAAACCTACGCAGACAAGA
TTATTTGTTTCACCTCCTAGACAGCCATGGCCTTTCGGCTTAATGTCCATAGAAAGTAACTTCC
ATTGAGACCAAACATGGGAGCAACACTTTTTTCTTCCAGGTTATTAATGGGTCAACCAGAGCAA
AAGGTTGTTGAGATAATACTTAGCACAGAAGGTGGTAAAACACAGAAGTGATTTTTTACTCTAA
CCTCCATTTCAAATGAGATTGGCTTTGCCTTTAGAGGGAACAAGGAAATGTTTGCGATTGCCGT
GCATACAAACTCTGCCGCGGAACTGGGCCTGAAAAAAATCTGCCTTTATTCTAAACACTGAGGG
GAATAGGCCTCTGCCCTTTAGTCAGACTCTGTGCAAATTGTGAAATATTATTTTATTATTTTAA
CAAGATTAAAAAACACTTTTACAAAAAAACAAAAACCTGTAAAAATGATTTTGAGCTACCTGAG
GACAAACCATAACTTTAACCAGCCAGTTTTCCAATGCATTGTAAATTTCACTTAAACCTGTTGG
TTATGACAATTTGAAGATCTTTTTCCTTAAATTATCACAACTTTTAACTTCATTTAAAAAAGAC
TTTTGTCTAAAGAAGAATATTATTATTATCTGTTCTTTCAACACCCCAGGATTTAAAAAAAATA
CTGATTATGCAAGTAATTGGGATCTAAGTATTAAATTGCAGCATTTGCAAATATTAATATAAAA
AGCACAACAAAATGTAGTGGAAATGACAAAGCTTGATTTTTTAAAACAACTGTAGAGATGTTTG
TGCAAATTCAATAATTCAACTTAAAATATAATTTTACAGCTCTGTTCAATAAAGCCTCTTTCCA
GGTAAGGTATGAGAAACAGTGTGTGTGTTTGTTGGGCAATAGTCACCCTTTCATTTAATGAGAT
TAGTTATGCAATTTACTGGTTTTATTATCTTGGGATAAATCTTCAGTTCTTCATACACAGTTAA
TGTTTGCAGGAACAAATTTGAAAAAAACACACCATGTATTCTCCTTTTATTTTTGTTAAACCTG
TTAAAATGTTGTACCTCTGTAGGTAAAATGCAAACCGAAATACAAGTGGAAATTTACTATCAAA
TTTCATAGTCAGCTCAAAAGGGGACATATCAGAATAATTACATAGGGATAGAATCAAAATAACC
TGTGTCCCATAAATCACACAAAGGAGGCAAATGATTAACCTAATTTATTTTAATTAATTAGTTA
TATTGAAAATCCTTTTTAAATTTCCAAGTCATCCATCTAGTTTCTCAAATCAAAGATTTACAGT
AGGTAATATCTGGGCACTTAGCATGGGAAAGATCTGCATTCACCTGCATGTCCGCCATATTGCC
ACCAACAATAGTTCTGCACTACCCAGGACGAGTAAAAAACAAATTCATTAGGTCTTACTTTTTG
CATTCTCTCTGCCAGGTCGACAGTACGTGTCTTCTGTTTAAAGAGAGGCTCGACTTGTTATCTT
CTTTCAATTACGTTTAAGTTGATTTGAGTGAGGCTTTTGTAAATGAATTTAAAGGAAAAAGACC
CCTAAATTCTGAATATCGGAAGGCATACATGTCACTTCAAGATAACTTAGTTTTTTTTTCTCCT
TCTCAGTTATCCTGAGCAAAGAAGTCGATATGAAAGTTTCAGTTGTGTCATTAAAGCATTTATC
GAACGTAAAAATCTTTCCTAAATTTTCACATAGTAAGAGAACACACTCTGGAAGTTAAAGAGAA
CTGGCTGGTACTTCAAAATTAATTTTTATTAAACTTCTAAGAAGTTGCAGATGGTTGTGACGAA
CACGGGACTATCAGAGGTGAGAGCAGGTGGACGAGAGAGGTGGAGAGAAACACAATTTCTCACA
TGAGAGTCACATCATTTAGACTCGCCAATCAACATAATCACTGTTTTTACATCAGATCAAATGC
TCAGTTGCTTTAATGAAAGTAAATGGCTAAAACTGTGGAAAGTTCTAAATGAGTTGGATACATG
AACTGGAAACATTGTGAAATCACCTTGTCTTTAGTAGAAGAAATGATGGTGGAACCCTTAAACA
CCTTCCCATTCCTAACATTGTTATGTTTATCAGAACTGCACCCACTGCCACCTTCACCTTACCA
TTTTGCTAATGTGTCAGCATATAATTTGAGAGGCCTGTTCGGTTCTTTTCTTCTTTTTTTTTTA
ATGGGGAAGCATTTAGCAATCAGGGTTTTATTTTTGGGAGAAACAACATGCTGTGTAATCTCCA
GTTACTCACAATAACTGATCCGCGTTAGTTAGGAGTGGTACCACTTTCATGGGTTCAGTGATGT
TTCTTCACAGGCTAACATTTCTACAGTTGTGTCGACTTTCATTGCAGTTAGCAGCACTCTCATG
TAGTGATATGAACATGCACACGGGAGCTGAGAAGACCTGAGTAAGAACATGTAACACTTTGACG
AAAGTTGCCAGAATGGTCAAACAATGCCAAATATGATATTTCCTTGGGAGCTAAGAGTGAGAAA
AAATATTGCCCAATCACACTTATCAGATGTATAAATAATCATGGACTATGCAGTTTTGAAAAAA
AATAACCTACTTACCTTTCTTTTAAAATGTTTTTTTTAAAGATGCTTTGCATACATACCTACCC
CTGCTTTTCCATTTCCTACCTACTTTTCTGTCTTGTGTTTTTATAGTTCCATCCTGGAAATATG
TATCCCTGGTCTGCTGTGCTCCCAGGTTCCATAGGGCTTGTATTCAACAGATCATGAGTTTGGC
CCATGATCAGTTCCTTTAAGAGAACTGATAGATGCTTGGTTACAATGTCAGGCAGTGGACCTTG
ACACTAGTGGCACTTCACTTCACATTTCCCCCAGAATTGGCTCAGCATAACAATGGATTATATC
TGAATTAGGACCTAACTAGTCTGTTATACCATGTAATATACAGTGAAAATAATTCCATTCTTTA
CTTGGACATATGATAAAATATAAATTACAGCTGTACTAACTTTTCATCAAACATGCAATATTAT
TTTAAATACTTTATAATAATAAACTTATCTGCCAATGAAATGTGTAATTTGAATAATAATTCAT
TCATTTCTATACTTGAGACTCTAAACATGACTGTGGTATTACTCAGAATCATTTAATTTTGTTT
CTCTTGGTAATTTTAAATTTGTGATAAATTGATTTGATTTTGGAAAAACTTTTCAAATGATCCT
CCTAAATTTGTGATTTATGTTCCTTATTACAGAACATTTTTTTTCTGTGCCTTTCAAATATCAG
GGCCACTGAAATAGACATTTAAACTGGAAAAAATTGACCTTCCCCAAATACATTCTAAATTAAT
ACGACATTCAGCCGTGTCTCAACAAAGCAGAGGGTGTACTCTTCTTGCAACTGGGCAGTTGATC
TCAATGAGGAGTTATTGCATTTTCTGTGAAAACAATAAAGTCATAGGGTTCAATCCCAAGCTGC
TGCTTTTCCTACAGCATTCCCTCTGTGGCTAGCCCATTTAACTCATTTTCTTAGCATTGTTTTT
AGAAAGGAATGTCTGTCCTTTTCTACTGTCTTAGAAGGAAAATTGCTACAAAATAATTTGATTT
TTTTCTCAAATCTCATAGAAAGTTTGTTGTATATTCATAGTATATCTACATACAATTGTGTATG
TTATTACGTGAGCAGTGAAAAACATAAACGCTTGACACTATAATGGGAAGCATGACAGCCAAGA
AAGTCCCTAGTGGATTACTTAATGTCTGTTGGAATAGAAGTGAGAAATTATGGTAAAGCTTCCA
CATTTCTATAGGAATTACTTTTTGAGCATATGGCCGTTTGAAGGTTAATAAGACTGTGAGCAGT
GGTTTCACTGCTCTGAACCCATATTGAGAATCTCAAACTGGAATCCAAAATTTGGAATAGGGCT
GAGGTTAAACTCTGGGTAGAAACTGCAATAGTTTTCTCAAGGATATATTTGCAACTGATTGAAT
TTAATTTCAACAGTACTAATTTTCCATGAGTTTATTTGAAATGTGTTCTTATTTTTCAAGCGTC
GGGAAATTCTATGAGTAGGGCTAAGCTTGGTAGTTTCGCTGGTTTTCTTGTGGCTCTTTATTGT
TGTCCTGGCGCTCCAGGCTTCCCTTTTTATTTCTTGAGTCTCACCAGTATATTTAAATGTATAA
GTTTAATCAAATATGCATTGTGTTAAATTTATATAAAACATTGGAGACCATAAAATTTAGATTG
AACTTAATTTACATTTTGATATTTTCCTTCTTCCAAATAGTTTCAGATAGCTGTATGTTATTTT
CCTTGGAATTTTTTTCAATAAATGAAATTATGTTAAATACTC

hide sequence

Protein Sequences


Protein RefSeqs	NP_954890	(Get FASTA)	NCBI Sequence Viewer
	XP_008762910	(Get FASTA)	NCBI Sequence Viewer
	XP_038968176	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAQ75750	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000000767
	ENSRNOP00000000767.6
	ENSRNOP00000092110
	ENSRNOP00000100044
GenBank Protein	P60756	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_954890 ⟸ NM_199269
- Peptide Label:	precursor
- UniProtKB:	P60756 (UniProtKB/Swiss-Prot), A0A0H2UH93 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLVYGLVWLLTVLLEGISGQGVYAPPTVRIVHSGLACNIEEERYSERVYTIREGETLELTCLV TGHPRPQIRWTKTAGSASDRFQDSSVFNETLRITSIQRHQGGRYYCKAENGLGSPAIKSIRVDV YYLDDPVVTVHQSIGEAKEQFYYERTVFLRCVANSNPPVRYSWRRGQEVLLQGSDKGVEIYEPF FTQGETKILKLKNLRPQDYANYSCIASVRNVCNIPDKMVSFRLSNKTASPSIKLLVDDPIVVNP GEAITLVCVTTGGEPMPSLTWVRSFGTLPEKIVLNGGTLTIPAITSDDAGTYSCIANNNVGNPA KKSTNIIVRALKKGRFWITPDPYHKDDNIQIGREVKISCQVEAVPSEELTFSWFKNGRPLRSSE RMVITQTDPDVSPGTTNLDIIDLKFTDFGTYTCVASLKGGGISDISIDVNISSSTVPPNLTVPQ EKSPLVTREGDTIELQCQVTGKPKPIILWSRADKEVAMPDGTMQMESYDGTLRIVNVSREMSGM YRCQTSQYNGFNVKPREALVQLIVQYPPAVEPAFLEIRQGQDRSVTMSCRVLRAYPIRVLTYEW RLGNKLLRTGQFDSQEYTEYPLKSLSNENYGVYNCSIINEAGAGRCSFLVTGKAYAPEFYYDTY NPVWQNRHRVYSYSLQWTQMNPDAVDRIVAYRLGIRQAGQQRWWEQEIKINGNIQKGELITYNL TELIKPEAYEVRLTPLTKFGEGDSTIRVIKYTGEFHCGFEDGNICLFTQDDTDNFDWTKQSTAT RNTKYTPNTGPNADRSGSKEGFYMYIETSRPRLEGEKARLLSPVFSIAPKNPYGPTNSAYCFSF FYHMYGQHIGVLNVYLRLKGQTTIENPLWSSSGNKGQRWNEAHVNIYPITSFQLIFEGIRGPGI EGDIAIDDVSIAEGECAKQDLPTKNSVDGAVGILVHIWLFPVIILISILSPRR hide sequence

RefSeq Acc Id:	XP_008762910 ⟸ XM_008764688
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AD32 (UniProtKB/TrEMBL), A0A0H2UH93 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLVYGLVWLLTVLLEGISGQGVYAPPTVRIVHSGLACNIEEERYSERVYTIREGETLELTCLV TGHPRPQIRWTKTAGSASDRFQDSSVFNETLRITSIQRHQGGRYYCKAENGLGSPAIKSIRVDV YYLDDPVVTVHQSIGEAKEQFYYERTVFLRCVANSNPPVRYSWRRGQEVLLQGSDKGVEIYEPF FTQGETKILKLKNLRPQDYANYSCIASVRNVCNIPDKMVSFRLSNKTASPSIKLLVDDPIVVNP GEAITLVCVTTGGEPMPSLTWVRSFGTLPEKIVLNGGTLTIPAITSDDAGTYSCIANNNVGNPA KKSTNIIVRALKKGRFWITPDPYHKDDNIQIGREVKISCQVEAVPSEELTFSWFKNGRPLRSSE RMVITQTDPDVSPGTTNLDIIDLKFTDFGTYTCVASLKGGGISDISIDVNISSSTVPPNLTVPQ EKSPLVTREGDTIELQCQVTGKPKPIILWSRADKEVAMPDGTMQMESYDGTLRIVNVSREMSGM YRCQTSQYNGFNVKPREALVQLIVQYPPAVEPAFLEIRQGQDRSVTMSCRVLRAYPIRVLTYEW RLGNKLLRTGQFDSQEYTEYPLKSLSNENYGVYNCSIINEAGAGRCSFLVTGKAYAPEFYYDTY NPVWQNRHRVYSYSLQWTQMNPDAVDRIVAYRLGIRQAGQQRWWEQEIKINGNIQKGELITYNL TELIKPEAYEVRLTPLTKFGEGDSTIRVIKYTAPVNPHLREFHCGFEDGNICLFTQDDTDNFDW TKQSTATRNTKYTPNTGPNADRSGSKEGFYMYIETSRPRLEGEKARLLSPVFSIAPKNPYGPTN SAYCFSFFYHMYGQHIGVLNVYLRLKGQTTIENPLWSSSGNKGQRWNEAHVNIYPITSFQLIFE GIRGPGIEGDIAIDDVSIAEGECAKQDLPTKNSVDGAVGILVHIWLFPVIILISILSPRR hide sequence

Ensembl Acc Id:

ENSRNOP00000000767 ⟸ ENSRNOT00000000767

RefSeq Acc Id:	XP_038968176 ⟸ XM_039112248
- Peptide Label:	isoform X2
- UniProtKB:	A0A0H2UH93 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000092110 ⟸ ENSRNOT00000116494

Ensembl Acc Id:

ENSRNOP00000100044 ⟸ ENSRNOT00000153837

Protein Domains

Fibronectin type-III Ig-like MAM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P60756-F1-model_v2	AlphaFold	P60756	1-949	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:735131	AgrOrtholog
BioCyc Gene	G2FUF-37293	BioCyc
Ensembl Genes	ENSRNOG00000000618	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000000767	ENTREZGENE
	ENSRNOT00000000767.6	UniProtKB/Swiss-Prot
	ENSRNOT00000116494	ENTREZGENE
	ENSRNOT00000153837	ENTREZGENE
Gene3D-CATH	2.60.120.200	UniProtKB/Swiss-Prot
	2.60.40.10	UniProtKB/Swiss-Prot
InterPro	Cell_Adh-Cytoskel_Orgn	UniProtKB/Swiss-Prot
	ConA-like_dom_sf	UniProtKB/Swiss-Prot
	FN3_dom	UniProtKB/Swiss-Prot
	FN3_sf	UniProtKB/Swiss-Prot
	Ig-like_dom	UniProtKB/Swiss-Prot
	Ig-like_dom_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Ig_I-set	UniProtKB/Swiss-Prot
	Ig_sub	UniProtKB/Swiss-Prot
	Ig_sub2	UniProtKB/Swiss-Prot
	MAM_dom	UniProtKB/Swiss-Prot
KEGG Report	rno:314180	UniProtKB/Swiss-Prot
NCBI Gene	314180	ENTREZGENE
PANTHER	CONTACTIN 5	UniProtKB/Swiss-Prot
	MAM DOMAIN-CONTAINING GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR 2	UniProtKB/Swiss-Prot
Pfam	I-set	UniProtKB/Swiss-Prot
	Ig_3	UniProtKB/Swiss-Prot
	MAM	UniProtKB/Swiss-Prot
PhenoGen	Mdga2	PhenoGen
PROSITE	FN3	UniProtKB/Swiss-Prot
	IG_LIKE	UniProtKB/Swiss-Prot
	MAM_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000000618	RatGTEx
SMART	IGc2	UniProtKB/Swiss-Prot
	MAM	UniProtKB/Swiss-Prot
	SM00409	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48726	UniProtKB/Swiss-Prot
	SSF49265	UniProtKB/Swiss-Prot
	SSF49899	UniProtKB/Swiss-Prot
UniProt	A0A0H2UH93	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AD32	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LFV7_RAT	UniProtKB/TrEMBL
	MDGA2_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-06	Mdga2	MAM domain containing glycosylphosphatidylinositol anchor 2	Mamdc1	MAM domain containing glycosylphosphatidylinositol anchor 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Mamdc1	MAM domain containing glycosylphosphatidylinositol anchor 2	Mdga2		Symbol and Name updated	1299863	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar