Amigo3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 117,620,499 - 117,622,025 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 108,741,899 - 108,743,425 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 108,693,060 - 108,744,555 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 114,368,162 - 114,369,688 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 112,567,486 - 112,569,012 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 110,410,126 - 110,411,652 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 116,830,773 - 116,832,299 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 116,185,095 - 116,186,621 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 113,321,258 - 113,322,784 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 113,340,712 - 113,342,239 (+) | NCBI | | | | | Celera | 8 | 108,046,611 - 108,048,137 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q32 | NCBI | | | | |
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AMIGO3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 49,716,829 - 49,719,684 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 49,716,829 - 49,719,684 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 49,754,262 - 49,757,117 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 49,729,969 - 49,732,127 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 3 | 49,718,958 - 49,721,929 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | p21.31 | NCBI | | | | | HuRef | 3 | 49,813,243 - 49,816,214 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 49,706,322 - 49,709,293 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 49,746,115 - 49,748,970 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Amigo3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 9 | 107,930,358 - 107,932,900 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 107,930,358 - 107,932,900 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 108,053,159 - 108,055,701 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 108,053,159 - 108,055,701 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 107,955,490 - 107,958,032 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 107,911,260 - 107,913,802 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 107,663,009 - 107,665,551 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | F1 | NCBI | | | | | cM Map | 9 | 59.07 | NCBI | | | | |
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Amigo3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955532 | 1,619,532 - 1,621,064 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955532 | 1,618,659 - 1,621,706 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AMIGO3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 49,703,422 - 49,707,110 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 49,708,212 - 49,711,890 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 49,648,967 - 49,652,285 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 50,884,810 - 50,888,081 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 50,885,925 - 50,887,439 (-) | Ensembl | panpan1.1 | | panPan2 | |
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AMIGO3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 39,554,028 - 39,557,129 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 39,554,629 - 39,556,155 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 39,474,061 - 39,478,072 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 39,910,656 - 39,914,667 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 39,912,148 - 39,913,674 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 39,277,728 - 39,281,739 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 39,681,098 - 39,685,108 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 39,960,928 - 39,964,939 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Amigo3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405602 | 64,571,400 - 64,574,166 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936529 | 1,332,874 - 1,334,403 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936529 | 1,331,610 - 1,335,058 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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AMIGO3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 22 | 11,111,871 - 11,115,104 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 11,112,953 - 11,114,467 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 155,885,731 - 155,888,589 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Amigo3 (Heterocephalus glaber - naked mole-rat) |
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