Pia18 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Pia18 (Pristane induced arthritis QTL 18) Rattus norvegicus

Symbol: Pia18
Name: Pristane induced arthritis QTL 18
RGD ID: 634332
Previously known as: Pia14
Trait: joint integrity trait   (VT:0010548)    
Measurement Type: joint inflammation composite score   (CMO:0000919)    
LOD Score: 4.0
P Value: Not Available
Variance: Not Available
Inheritance Type: dominant
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2875,311,938 - 82,925,521RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0881,414,058 - 89,542,815RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0881,033,305 - 89,073,299RGDRnor5.0
RGSC_v3.4879,347,688 - 87,122,814RGDRGSC3.4
RGSC_v3.1879,366,742 - 87,142,270RGD
Cross Type: backcross
Strains Crossed: DA/ZtmRhd E3/ZtmRhd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition
pristane  (IDA)

Measurement Method

Vertebrate Trait

Rat Strain
DA/ZtmRhd  (IEA)
E3/ZtmRhd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Quest for arthritis-causative genetic factors in the rat. Joe B Physiol Genomics. 2006 Oct 3;27(1):1-11. Epub 2006 Jun 27.
2. Identification and isolation of dominant susceptibility loci for pristane-induced arthritis. Olofsson P, etal., J Immunol 2003 Jul 1;171(1):407-16.
3. The complexity in hunting for candidate genes within QTL that determine susceptibility to arthritis in rats. Xiong Q, etal., Crit Rev Immunol. 2008;28(2):127-57.
4. Genetic and molecular basis of quantitative trait loci of arthritis in rat: genes and polymorphisms. Xiong Q, etal., J Immunol. 2008 Jul 15;181(2):859-64.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
11500987LOC108351747uncharacterized LOC10835174787535503675369526Rat
41024479LOC120094477small nucleolar RNA SNORA4887548632275486467Rat
7736108LOC102549203uncharacterized LOC10254920387558484375590148Rat
2811Onecut1one cut homeobox 187559943275633598Rat
1310552Atosaatos homolog A87569482875772565Rat
71054Arpp19cAMP-regulated phosphoprotein 1987577964075802474Rat
3143Myo5amyosin VA87581198575980049Rat
1309994Myo5cmyosin VC87598949776066485Rat
41342803LOC120094537small nucleolar RNA U387599768175997765Rat
620759Gnb5G protein subunit beta 587607612076105069Rat
621015Bcl2l10Bcl2-like 1087610732676113373Rat
62087Mapk6mitogen-activated protein kinase 687614665076169767Rat
7701876LOC102551227uncharacterized LOC10255122787617741376181522Rat
1549772Leo1LEO1 homolog, Paf1/RNA polymerase II complex component87619954776223983Rat
6487844LOC100912347RNA polymerase-associated protein LEO1-like87622459976242856Rat
1311030Tmod3tropomodulin 387624897876310855Rat
61948Tmod2tropomodulin 287631673676366003Rat
1304585Lysmd2LysM domain containing 287637898476394396Rat
621209Scg3secretogranin III87639977776442015Rat
41304021LOC120094210uncharacterized LOC12009421087647624076510654Rat
1305979Bmp5bone morphogenetic protein 587651716476639925Rat
1565090Hmgcll13-hydroxy-3-methylglutaryl-CoA lyase like 187675730176887300Rat
1565220GfralGDNF family receptor alpha like87691789476963258Rat
41282450LOC120094480small nucleolar RNA SNORA4887692356876923709Rat
2788Hcrtr2hypocretin receptor 287698983477105953Rat
1311988Fam83bfamily with sequence similarity 83, member B87728735177363795Rat
41289644LOC120094498small nucleolar RNA SNORA1787753279877532927Rat
1359482Tinagtubulointerstitial nephritis antigen87780003177885077Rat
41300456LOC120094535U2 spliceosomal RNA87783662177836773Rat
1590513Mlipmuscular LMNA-interacting protein87793508778204725Rat
1549773Lrrc1leucine rich repeat containing 187823989778407347Rat
41110620LOC120094211uncharacterized LOC12009421187843298178450185Rat
11378963LOC108351748uncharacterized LOC10835174887845769978515167Rat
1560540Klhl31kelch-like family member 3187851551478538873Rat
41316372Rpl27a-ps7ribosomal protein L27a, pseudogene 787861910978626011Rat
619868Gclcglutamate-cysteine ligase, catalytic subunit87862989978668547Rat
620583Elovl5ELOVL fatty acid elongase 587879084678857307Rat
41078549LOC120094500small nucleolar RNA SNORA1787888720378887330Rat
61852Gcm1glial cells missing transcription factor 187892568778938924Rat
40952924LOC120094539U4 spliceosomal RNA87893614678936293Rat
1593343Gapdh-ps10Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 1087893957878944018Rat
1310374Fbxo9f-box protein 987895848278984015Rat
71050Cilk1ciliogenesis associated kinase 187898407579042695Rat
1306318Rpl12-ps1ribosomal protein L12, pseudogene 187905946479060196Rat
1309970Gsta4glutathione S-transferase alpha 487906696779084193Rat
1593189Gsta5glutathione S-transferase alpha 587910556179117472Rat
41320357LOC120094562U6 spliceosomal RNA87917794879178051Rat
2754Gsta2glutathione S-transferase alpha 287918453579196827Rat
1305838Dppa5developmental pluripotency associated 587921534179217282Rat
1311103Ooepoocyte expressed protein87922338879224554Rat
1586947Ddx43DEAD-box helicase 4387925500179284468Rat
2321966Trappc14l1trafficking protein particle complex subunit 14 like 187929077079299825Rat
1586939Cgascyclic GMP-AMP synthase87929228279306998Rat
1308830Mto1mitochondrial tRNA translation optimization 187930968179335231Rat
67387Eef1a1eukaryotic translation elongation factor 1 alpha 187934155479344784Rat
1311388Slc17a5solute carrier family 17 member 587939441679429387Rat
1311287Cd109CD109 molecule87945448079569195Rat
41375214Myl6-ps2myosin light chain 6, pseudogene 287962273779623115Rat
1592002Ybx1-ps10Y box binding protein 1, pseudogene 1087986189179870816Rat
41205198LOC120094378uncharacterized LOC12009437888011436080118155Rat
2324749Dynll1l2dynein light chain LC8-type 1 like 288032178380322046Rat
41328102LOC120094401U6 spliceosomal RNA88048534080485445Rat
1585750Rps3a-ps10ribosomal protein S3a, pseudogene 1088051301780513751Rat
2374Col12a1collagen type XII alpha 1 chain88054759280665665Rat
9394113Sec61gl1Sec61 translocon subunit gamma like 188070102980710125Rat
68365Cox7a2cytochrome c oxidase subunit 7A288071682480720922Rat
1303315Tmem30atransmembrane protein 30A88072874980757197Rat
628597Filip1filamin A interacting protein 188076128380956556Rat
41029882LOC120094506small nucleolar RNA SNORA1788084796080848092Rat
9159669LOC1036904855'-nucleotidase domain-containing protein 2 pseudogene88094884780950737Rat
1304565Senp6SUMO specific peptidase 688098867581071606Rat
1560646Myo6myosin VI88108715781242022Rat
620499Impg1interphotoreceptor matrix proteoglycan 188124362481389722Rat
2846Htr1b5-hydroxytryptamine receptor 1B88251357282534670Rat
11422632LOC108351750uncharacterized LOC10835175088256881482571906Rat
1583682Mei4meiotic double-stranded break formation protein 488276566182939649Rat
7661831LOC102553441uncharacterized LOC10255344188285505282951281Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34310D8Mgh414988246075882460899Ratregion
35248D8Rat2617287531177775311938Ratregion
36809D8Rat2314787732119177321328Ratregion
34947D8Rat2216187939519479395351Ratregion
35014D8Rat2411987813815878138314Ratregion
35905D8Rat2114988292552182925667Ratregion
38018D8Rat9619987549650775496705Ratregion
39574D8Rat13924287920677279207003Ratregion
39574D8Rat13924287920677279207003Ratregion
42863D8Rat17821087647486676475064Ratregion
42869D8Rat17734388152287681523213Ratregion
41794D8Rat20522988213076382131000Ratregion
44467D8Got20419787537094475371143Ratregion
44469D8Got11921187780997577810186Ratregion
44471D8Got12028087674004176740321Ratregion
44472D8Got12117787887695378877118Ratregion
44475D8Got12315488071177880711932Ratregion
44476D8Got12519688010971180109907Ratregion
44477D8Got12417588039632080396495Ratregion
44478D8Got12624888001175280012002Ratregion
44479D8Got12716088039633480396494Ratregion
44482D8Got12818188169855781698738Ratregion
44483D8Got13024888287206282872307Ratregion
7205900UniSTS:488216087851688478516993Ratregion
7205900UniSTS:488216087851688478516999Ratregion
5035777PMC166422P133288253307882533410Ratregion
5035943PMC316377P129587560054975600844Ratregion
5036253D9Mit31913887813814778138287Ratregion
5036376Itga2088137050081371432Ratregion
5035683SGC3134313187577161675771747Ratregion
5031320PMC137013P310787769691577697022Ratregion
5026102RH13092019287569882475699016Ratregion
5034746BI27678011087929501779295127Ratregion
5029765BI28467615987885693778857096Ratregion
5025060AW55582111587614668076146795Ratregion
5033063RH13745421487562676775626981Ratregion
502790126.MMHAP76FRA11.seq15287658394476584096Ratregion
5033477RH13897716787569565275695901Ratregion
5025730RH12943821087625100576251215Ratregion
5025906RH13015722087933902479339244Ratregion
5055119RH14361720988073040680730615Ratregion
5054667RH14335624087931133479311648Ratregion
5054841RH14345622288066193480662325Ratregion
5056671RH14451314687943271579432861Ratregion
5052339U4973918888123815681238344Ratregion
5055235RH14368410487911244079112544Ratregion
5055235RH14368410487911244079112544Ratregion
5055235RH14368410487918947679189580Ratregion
5055235RH14368410487918947679189580Ratregion
5055305RH14372515187619977776199928Ratregion
5059180BI27854916787885690778857074Ratregion
5059254BF38788215487840413478404288Ratregion
5044112RH13041718187639405476394235Ratregion
5040936RH12856921787939437579394594Ratregion
5043600RH13011818487922340979223593Ratregion
5041366RH12881620487866827078668474Ratregion
5044076RH13039621388106700781067220Ratregion
5044678RH13074120887849271478492922Ratregion
5047424RH13232015388106631781066470Ratregion
5045094RH13098018787895865578958842Ratregion
5047618RH13243118488054786080548044Ratregion
5049094RH13328218588123946381239648Ratregion
5049804RH13369119188124198781242178Ratregion
5047218RH13220120187597533175975532Ratregion
5042990RH12976618087625084476251024Ratregion
5039992RH12802622087597977275979992Ratregion
5041194RH12871618087580217175802351Ratregion
5072642RH13696818588124171381241898Ratregion
5072492RH13688121688072881180729027Ratregion
5072566RH13692318988076138880761577Ratregion
5074686RH13816013587627405876274193Ratregion
5075282RH13850412487939558079395704Ratregion
5077666RH13988719688077577980775975Ratregion
5079376RH14096020287904135079042505Ratregion
5076654RH13930118087597431175974491Ratregion
5079700RH14115319887610470276104900Ratregion
5079846RH14123719787894012678940323Ratregion
5078786RH14055117988076225180762430Ratregion
5070664RH13463318087904694779047127Ratregion
5073442RH13743818387610422676104409Ratregion
5074440RH13801817387634465476344827Ratregion
5061756AW53302016588124035181240528Ratregion
5061756AW53302016588124036381240528Ratregion
5069764AU02898825888169851881698778Ratregion
5063544BF40433219387628362376283816Ratregion
5063680BE10796116288106864381068805Ratregion
5063776AW53514716287604950676049668Ratregion
5065362BE11511115088062739580627545Ratregion
5063894BE12018515387635795876358111Ratregion
5062636BF40363519388076885880769051Ratregion
5063788AW53517715687632575676325912Ratregion
5065352AA95724819387885708278857275Ratregion
5062756AW53427215188099129080991441Ratregion
5061098AW53230416287931003679310198Ratregion
5064618BF39945118888109392281094110Ratregion
5061468BF39649212087562892575629046Ratregion
5063240BI30156115387645653576456688Ratregion
5087046AW52176914287615075676150898Ratregion
5088090Scg39887639978376399881Ratregion
5089793AU04936723387880941378809650Ratregion
5087947UniSTS:14341511488253168682531800Ratregion
5083191BF39095315387899947478999627Ratregion
5083925AA94312323887632471976324957Ratregion
5084184AI1763349087734122277341312Ratregion
5084218AA89397520788072957780729784Ratregion
5090185AU04960111087682495876825068Ratregion
5090211AU04961628487631476176315109Ratregion
5087636PMC85812P336987560066975601038Ratregion
5085429BE09829116587956984079570005Ratregion
5090877D6S1204E9587896271678963046Ratregion
5080966RH14188620287554110575541307Ratregion
5081080RH14195319687845613078456326Ratregion
5089221AU04902721687569657275696790Ratregion
5083503AI54740624587639988176400126Ratregion
5503462MAPK6_180.284587614744176148286Ratregion
5503480UniSTS:46269051387560023475600747Ratregion
5503631Onecut19587562638175626476Ratregion
5505945UniSTS:49664219087651723476517424Ratregion
5505728UniSTS:491331127988253219882533477Ratregion
5507165UniSTS:22489915287639418276394334Ratregion
5501031PMC124268P188788123730181238188Ratregion
5501285D4S232517788051363780513814Ratregion
5504700PMC56999P140787651725176517658Ratregion
5502202GDB:58061420188253262382532824Ratregion
Position Markers

Flank 1: (D8Rat21)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2882,925,521 - 82,925,667 (+)MAPPER
Rnor_6.0889,542,815 - 89,542,960NCBI
Rnor_5.0889,073,299 - 89,073,444UniSTS
RGSC_v3.4887,122,815 - 87,122,960UniSTS
RGSC_v3.4887,122,814 - 87,122,960RGD
RGSC_v3.1887,142,270 - 87,142,415RGD
Celera882,609,743 - 82,609,896UniSTS
RH 3.4 Map8954.3RGD
RH 3.4 Map8954.3UniSTS
RH 2.0 Map8771.4RGD
SHRSP x BN Map847.1RGD
FHH x ACI Map859.1299RGD
Cytogenetic Map8q31UniSTS
Peak: (D8Mgh11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.28105,647,049 - 105,647,213 (+)MAPPER
Rnor_6.08113,580,399 - 113,580,562NCBI
Rnor_5.08112,967,026 - 112,967,189UniSTS
RGSC_v3.48110,106,284 - 110,106,448RGD
RGSC_v3.48110,106,285 - 110,106,448UniSTS
RGSC_v3.18110,125,739 - 110,125,903RGD
Celera8105,003,697 - 105,003,860UniSTS
RH 3.4 Map81145.3UniSTS
RH 3.4 Map81145.3RGD
RH 2.0 Map8871.2RGD
Cytogenetic Map8q32UniSTS
Flank 2: (D8Rat26)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2875,311,777 - 75,311,938 (+)MAPPER
Rnor_6.0881,413,898 - 81,414,058NCBI
Rnor_5.0881,033,145 - 81,033,305UniSTS
RGSC_v3.4879,347,528 - 79,347,688UniSTS
RGSC_v3.4879,347,527 - 79,347,688RGD
RGSC_v3.1879,366,582 - 79,366,742RGD
Celera875,114,658 - 75,114,819UniSTS
RH 3.4 Map8926.39UniSTS
RH 3.4 Map8926.39RGD
RH 2.0 Map8715.7RGD
FHH x ACI Map853.4999RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2316950Scl66Serum cholesterol level QTL 664.1blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)830848259105647037Rat
737824Hcar10Hepatocarcinoma resistance QTL 102.9liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)84071306682925667Rat
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83085640475856404Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)84186687686866876Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
631653Bp125Blood pressure QTL 1253.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)866142385111142385Rat
631664Hcar3Hepatocarcinoma resistance QTL 32.90.0005liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)85423764499103503Rat
4889938Bss89Bone structure and strength QTL 893.8tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)85009524982460899Rat
5684973Bss100Bone structure and strength QTL 1004.7tibia area (VT:1000281)tibia area measurement (CMO:0001382)85009524982460899Rat
731182Uae24Urinary albumin excretion QTL 246.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)81933115293965294Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)871888757116888757Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)871888757116888757Rat
631271Lecl1Lens clarity QTL 10.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)81898416884531599Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)87531193882925521Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)871888757116888757Rat
8662823Vetf5Vascular elastic tissue fragility QTL 51.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)82824291299525068Rat
10402857Bp380Blood pressure QTL 3800.95arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)85396876598968765Rat
1331838Niddm61Non-insulin dependent diabetes mellitus QTL 613.530.0004blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83646953599083736Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)870513503118219066Rat
1300177Cm2Cardiac mass QTL 23.65heart mass (VT:0007028)heart weight (CMO:0000017)854259986100382532Rat
1549908Neudeg1Neurodegradation QTL 15.50nervous system integrity trait (VT:0010566)logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)83018886794457446Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
1358896Bp262Blood pressure QTL 2622.89arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)82720571599103503Rat
1358906Bp253Blood pressure QTL 25340.0004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)84071306693965294Rat
1582254Kidm31Kidney mass QTL 313kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)85423764485365202Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat
1578755Pur5Proteinuria QTL 53.30.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)830848154101699754Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)882460758122812818Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)846531639119088626Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)869349194112783834Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84269268490165460Rat
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)861290298119084929Rat
2303570Gluco48Glucose level QTL 482blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)84980583194805831Rat
2301402Bp316Blood pressure QTL 3160.005arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)85396876598968765Rat
12879878Bw183Body weight QTL 1830.001body mass (VT:0001259)body weight (CMO:0000012)84329616998968765Rat
1582243Bw66Body weight QTL 663.40.0048body mass (VT:0001259)body weight (CMO:0000012)85423764485365202Rat
1331837Bw23Body weight QTL 234.190.00007body mass (VT:0001259)body weight (CMO:0000012)84653172299083736Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)87531177784531599Rat
1358892Kidm26Kidney mass QTL 263.69kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)82720571599103503Rat
1582222Epfw2Epididymal fat weight QTL 23.20.0005epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)83173772976737729Rat
61358Bp39Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83555193880551938Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83558203280582032Rat
12879879Cm99Cardiac mass QTL 990.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)84329616998968765Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)876468691121468691Rat
1358907Cm40Cardiac mass QTL 401.89heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)82720571599103503Rat
1358912Bw51Body weight QTL 512.95body mass (VT:0001259)body weight (CMO:0000012)851351728107062046Rat
2313046Bss78Bone structure and strength QTL 783.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)83084815482460899Rat
2293697Bmd39Bone mineral density QTL 39femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)85404374498968765Rat
2313067Bss77Bone structure and strength QTL 773.10.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)83084815482460899Rat
2313088Bss75Bone structure and strength QTL 753.10.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)83084815482460899Rat
12879882Am8Aortic mass QTL 80.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)84329616998968765Rat
12879880Cm100Cardiac mass QTL 1000.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)84329616998968765Rat
12879881Cm101Cardiac mass QTL 1010.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)84329616998968765Rat
12879883Kidm65Kidney mass QTL 650.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)84329616998968765Rat
2313057Bss76Bone structure and strength QTL 7630.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)83084815482460899Rat
2313086Bss60Bone structure and strength QTL 604.10.0001tibia length (VT:0004357)tibia length (CMO:0000450)85009524982460899Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Pia18

RGD Curation Notes
Note Type Note Reference
qtl_cross_type backcross  
qtl_gene 52 known and 7 novel genes were found in an analysis based on PubMed and OMIM data 2307198
qtl_general DA allele associates with increased incidences of arthritis 631850