Rpl32 (ribosomal protein L32) - Rat Genome Database

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Gene: Rpl32 (ribosomal protein L32) Rattus norvegicus
Analyze
Symbol: Rpl32
Name: ribosomal protein L32
RGD ID: 621203
Description: Predicted to be a structural constituent of ribosome. Involved in cellular response to dexamethasone stimulus and liver regeneration. Part of cytosolic large ribosomal subunit. Orthologous to human RPL32 (ribosomal protein L32); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 60S ribosomal protein L32; large ribosomal subunit protein eL32; MGC72905
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Rpl32-ps3  
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84150,536,650 - 150,540,214 (-)NCBIGRCr8
mRatBN7.24148,864,048 - 148,867,612 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4148,864,044 - 148,867,612 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4155,092,786 - 155,096,354 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04150,876,803 - 150,880,371 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04149,499,705 - 149,503,273 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04147,715,480 - 147,719,044 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6145,777,318 - 145,777,767 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl4147,715,473 - 147,719,072 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04210,999,039 - 211,002,603 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44151,941,599 - 151,945,012 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16145,189,431 - 145,189,896 (-)NCBI
Celera4137,754,089 - 137,757,653 (-)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (EXP)
6-propyl-2-thiouracil  (EXP)
amino acid  (ISO)
amiodarone  (EXP)
ammonium chloride  (EXP)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
azoxystrobin  (ISO)
benzbromarone  (EXP)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (EXP,ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
chloropicrin  (ISO)
clofibrate  (EXP,ISO)
clofibric acid  (EXP)
cocaine  (EXP)
copper(II) chloride  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (EXP)
disodium selenite  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
fenpyroximate  (ISO)
fipronil  (EXP)
folic acid  (ISO)
gallic acid  (ISO)
hydrogen peroxide  (ISO)
indometacin  (EXP,ISO)
inulin  (ISO)
ivermectin  (ISO)
L-ethionine  (EXP)
Mesaconitine  (EXP)
methylisothiazolinone  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
omeprazole  (EXP)
paracetamol  (ISO)
parathion  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
pirinixic acid  (EXP)
propiconazole  (ISO)
pyrimidifen  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
sirolimus  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
thapsigargin  (EXP)
thioacetamide  (EXP)
thiram  (ISO)
torin 1  (ISO)
trichloroethene  (EXP)
triphenyl phosphate  (ISO)
tungsten  (ISO)
urethane  (ISO)
ursodeoxycholic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Structures of the human and Drosophila 80S ribosome. Anger AM, etal., Nature. 2013 May 2;497(7447):80-5. doi: 10.1038/nature12104.
2. Coordinate regulation of ribosomal protein mRNA level in regenerating rat liver. Study with the corresponding mouse cloned cDNAs. Faliks D and Meyuhas O, Nucleic Acids Res. 1982 Feb 11;10(3):789-801.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. The primary structure of rat ribosomal protein L32. Rajchel A, etal., Nucleic Acids Res 1988 Mar 25;16(5):2347.
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
11. Dexamethasone stimulates ribosomal protein L32 gene transcription in rat myoblasts. Sienna N, etal., Mol Cell Endocrinol. 2000 Sep 25;167(1-2):127-37.
12. Isolation of eukaryotic ribosomal proteins. Purification and characterization of 60 S ribosomal subunit proteins L3, L6, L7', L8, L10, L15, L17, L18, L19, L23', L25, L27', L28, L29, L31, L32, L34, L35, L36, L36', and L37'. Tsurugi K, etal., J Biol Chem. 1977 Jun 10;252(11):3961-9.
Additional References at PubMed
PMID:6993285   PMID:12477932   PMID:12962325   PMID:15489334   PMID:16854843   PMID:19946888   PMID:22658674   PMID:24930395   PMID:25957688  


Genomics

Comparative Map Data
Rpl32
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84150,536,650 - 150,540,214 (-)NCBIGRCr8
mRatBN7.24148,864,048 - 148,867,612 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4148,864,044 - 148,867,612 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4155,092,786 - 155,096,354 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04150,876,803 - 150,880,371 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04149,499,705 - 149,503,273 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04147,715,480 - 147,719,044 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6145,777,318 - 145,777,767 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl4147,715,473 - 147,719,072 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04210,999,039 - 211,002,603 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44151,941,599 - 151,945,012 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16145,189,431 - 145,189,896 (-)NCBI
Celera4137,754,089 - 137,757,653 (-)NCBICelera
Cytogenetic Map4q42NCBI
RPL32
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38312,834,485 - 12,841,582 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl312,834,485 - 12,841,582 (-)EnsemblGRCh38hg38GRCh38
GRCh37312,875,984 - 12,883,081 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36312,851,444 - 12,858,081 (-)NCBINCBI36Build 36hg18NCBI36
Build 34312,851,444 - 12,856,949NCBI
Celera312,814,735 - 12,821,372 (-)NCBICelera
Cytogenetic Map3p25.2NCBI
HuRef312,810,357 - 12,816,994 (-)NCBIHuRef
CHM1_1312,826,437 - 12,833,074 (-)NCBICHM1_1
T2T-CHM13v2.0312,835,994 - 12,843,091 (-)NCBIT2T-CHM13v2.0
Rpl32
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396115,782,475 - 115,785,704 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6115,782,466 - 115,785,708 (-)EnsemblGRCm39 Ensembl
GRCm386115,805,514 - 115,808,743 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6115,805,505 - 115,808,747 (-)EnsemblGRCm38mm10GRCm38
MGSCv376115,755,532 - 115,758,761 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366115,771,133 - 115,774,362 (-)NCBIMGSCv36mm8
Celera6117,645,158 - 117,648,387 (-)NCBICelera
Cytogenetic Map6E3NCBI
cM Map653.72NCBI
Rpl32
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542917,885,314 - 17,890,536 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542917,886,048 - 17,890,536 (+)NCBIChiLan1.0ChiLan1.0
RPL32
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2212,818,519 - 12,824,279 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1312,823,281 - 12,829,041 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0312,759,205 - 12,764,800 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1313,103,471 - 13,109,043 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl313,103,471 - 13,109,044 (-)Ensemblpanpan1.1panPan2
Rpl32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494217,923,205 - 17,927,086 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936602982,092 - 986,567 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936602982,633 - 986,458 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPL32
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1368,786,856 - 68,793,204 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11368,788,109 - 68,793,265 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21376,057,726 - 76,061,577 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RPL32
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12248,811,342 - 48,816,905 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2248,811,401 - 48,816,882 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041117,672,080 - 117,677,680 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rpl32
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624872430,302 - 435,365 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624872430,677 - 435,145 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rpl32
26 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:97
Count of miRNA genes:88
Interacting mature miRNAs:93
Transcripts:ENSRNOT00000014493, ENSRNOT00000046799
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4148090542168069246Rat
61446Coreg2Compensatory renal growth QTL 23.5kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)4148423102157580971Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1549827Scl46Serum cholesterol level QTL 463.5blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)4132396220177396220Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4125590636170590636Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4145568712182687754Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4109827074154827074Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482798864152731274Rat
2303623Vencon2Ventilatory control QTL 23.8respiration trait (VT:0001943)minute ventilation (CMO:0000132)4135204660180204660Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4135699135180699135Rat
737978Pia23Pristane induced arthritis QTL 235.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4137755016181392681Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
724535Cm18Cardiac mass QTL 182.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)4118856416163856416Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4105789505150789505Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4109827074154827074Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4124778595169778595Rat
631511Pia7Pristane induced arthritis QTL 74.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
61406Scwia1Streptococcal cell wall induced arthritis QTL 12.3joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)4106805662151805662Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4123143783168143783Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
61422Cia13Collagen induced arthritis QTL 134.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4132642577167139601Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4146565735175236377Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4114627026159627026Rat
12798523Anxrr56Anxiety related response QTL 562.830.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)485253748150276390Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
12798525Anxrr57Anxiety related response QTL 573.210.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4147278504167139601Rat

Markers in Region
RH135298  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24148,863,670 - 148,863,867 (+)MAPPERmRatBN7.2
Rnor_6.04147,715,103 - 147,715,299NCBIRnor6.0
Rnor_5.04210,998,662 - 210,998,858UniSTSRnor5.0
Celera4137,753,712 - 137,753,908UniSTS
RH 3.4 Map4951.41UniSTS
Cytogenetic Map4q42UniSTS
AI012088  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24148,868,008 - 148,868,313 (+)MAPPERmRatBN7.2
Rnor_6.04147,719,441 - 147,719,745NCBIRnor6.0
Rnor_5.04211,003,000 - 211,003,304UniSTSRnor5.0
RGSC_v3.44151,945,409 - 151,945,713UniSTSRGSC3.4
Celera4137,758,050 - 137,758,354UniSTS
RH 3.4 Map4966.9UniSTS
Cytogenetic Map4q42UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
18 21 86 195 132 135 81 38 81 12 346 162 163 70 106 54

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_013226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063285653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC061562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC082797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ226474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X06483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000014493   ⟹   ENSRNOP00000014493
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4148,864,044 - 148,867,612 (-)Ensembl
Rnor_6.0 Ensembl4147,715,473 - 147,719,072 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000046799   ⟹   ENSRNOP00000041638
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3112,494,810 - 112,495,467 (+)Ensembl
Rnor_6.0 Ensembl6145,777,318 - 145,777,767 (-)Ensembl
RefSeq Acc Id: NM_013226   ⟹   NP_037358
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84150,536,650 - 150,540,214 (-)NCBI
mRatBN7.24148,864,048 - 148,867,612 (-)NCBI
Rnor_6.04147,715,480 - 147,719,044 (-)NCBI
Rnor_5.04210,999,039 - 211,002,603 (-)NCBI
RGSC_v3.44151,941,599 - 151,945,012 (-)RGD
Celera4137,754,089 - 137,757,653 (-)RGD
Sequence:
RefSeq Acc Id: XM_063285653   ⟹   XP_063141723
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84150,536,650 - 150,540,180 (-)NCBI
RefSeq Acc Id: NP_037358   ⟸   NM_013226
- UniProtKB: Q63ZV8 (UniProtKB/Swiss-Prot),   P62912 (UniProtKB/Swiss-Prot),   A6IKZ7 (UniProtKB/TrEMBL),   A0A8L2ULN5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000014493   ⟸   ENSRNOT00000014493
Ensembl Acc Id: ENSRNOP00000041638   ⟸   ENSRNOT00000046799
RefSeq Acc Id: XP_063141723   ⟸   XM_063285653
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P62912-F1-model_v2 AlphaFold P62912 1-135 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693326
Promoter ID:EPDNEW_R3851
Type:multiple initiation site
Name:Rpl32_1
Description:ribosomal protein L32
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.04147,719,044 - 147,719,104EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621203 AgrOrtholog
BioCyc Gene G2FUF-43313 BioCyc
Ensembl Genes ENSRNOG00000010746 Ensembl, UniProtKB/Swiss-Prot
  ENSRNOG00000032605 UniProtKB/TrEMBL
  ENSRNOG00055005203 UniProtKB/Swiss-Prot
  ENSRNOG00055005211 UniProtKB/Swiss-Prot
  ENSRNOG00055009330 UniProtKB/Swiss-Prot
  ENSRNOG00055032561 UniProtKB/Swiss-Prot
  ENSRNOG00060015036 UniProtKB/Swiss-Prot
  ENSRNOG00060027611 UniProtKB/Swiss-Prot
  ENSRNOG00060031677 UniProtKB/Swiss-Prot
  ENSRNOG00065007447 UniProtKB/Swiss-Prot
  ENSRNOG00065032088 UniProtKB/Swiss-Prot
  ENSRNOG00065033462 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000014493.6 UniProtKB/Swiss-Prot
  ENSRNOT00000046799.3 UniProtKB/TrEMBL
  ENSRNOT00055008352 UniProtKB/Swiss-Prot
  ENSRNOT00055008360 UniProtKB/Swiss-Prot
  ENSRNOT00055015775 UniProtKB/Swiss-Prot
  ENSRNOT00055056278 UniProtKB/Swiss-Prot
  ENSRNOT00060025770 UniProtKB/Swiss-Prot
  ENSRNOT00060047897 UniProtKB/Swiss-Prot
  ENSRNOT00060054885 UniProtKB/Swiss-Prot
  ENSRNOT00065011614 UniProtKB/Swiss-Prot
  ENSRNOT00065055261 UniProtKB/Swiss-Prot
  ENSRNOT00065057523 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:6921029 IMAGE-MGC_LOAD
  IMAGE:7301263 IMAGE-MGC_LOAD
InterPro Ribosomal_L32e UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_L32e_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_L32e_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:28298 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:105483 IMAGE-MGC_LOAD
  MGC:72905 IMAGE-MGC_LOAD
NCBI Gene 28298 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L32 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
Pfam Ribosomal_L32e UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rpl32 PhenoGen
PROSITE RIBOSOMAL_L32E UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000010746 RatGTEx
  ENSRNOG00000032605 RatGTEx
  ENSRNOG00055005203 RatGTEx
  ENSRNOG00055005211 RatGTEx
  ENSRNOG00055009330 RatGTEx
  ENSRNOG00055032561 RatGTEx
  ENSRNOG00060015036 RatGTEx
  ENSRNOG00060027611 RatGTEx
  ENSRNOG00060031677 RatGTEx
  ENSRNOG00065007447 RatGTEx
  ENSRNOG00065032088 RatGTEx
  ENSRNOG00065033462 RatGTEx
SMART Ribosomal_L32e UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Ribosomal protein L32e UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A0A8L2ULN5 ENTREZGENE, UniProtKB/TrEMBL
  A6IKZ7 ENTREZGENE, UniProtKB/TrEMBL
  P62912 ENTREZGENE
  Q63ZV8 ENTREZGENE
  RL32_RAT UniProtKB/Swiss-Prot
UniProt Secondary P02433 UniProtKB/Swiss-Prot
  Q63ZV8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Rpl32  ribosomal protein L32      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Rpl32  ribosomal protein L32      Symbol and Name status set to provisional 70820 PROVISIONAL