Rpl14 (ribosomal protein L14) - Rat Genome Database

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Gene: Rpl14 (ribosomal protein L14) Rattus norvegicus
Analyze
Symbol: Rpl14
Name: ribosomal protein L14
RGD ID: 621180
Description: Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in rRNA processing and ribosomal large subunit biogenesis. Part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human RPL14 (ribosomal protein L14); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 60S ribosomal protein L14; large ribosomal subunit protein eL14
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88129,163,620 - 129,166,745 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8129,163,317 - 129,167,459 (+)EnsemblGRCr8
mRatBN7.28120,286,035 - 120,289,160 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8120,284,645 - 120,289,064 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8125,863,219 - 125,866,076 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08124,062,237 - 124,065,094 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08121,904,654 - 121,907,538 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08129,240,528 - 129,243,400 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8129,240,528 - 129,243,402 (+)Ensemblrn6Rnor6.0
Rnor_5.08128,438,421 - 128,441,293 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48125,582,095 - 125,584,968 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8119,428,067 - 119,430,939 (+)NCBICelera
RGSC_v3.18125,601,831 - 125,604,704 (+)NCBI
Cytogenetic Map8q32NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,6-dimethoxyphenol  (ISO)
2-hydroxypropanoic acid  (ISO)
3',5'-cyclic UMP  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
Butylbenzyl phthalate  (ISO)
C60 fullerene  (EXP)
cadmium atom  (ISO)
chloropicrin  (ISO)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
clobetasol  (ISO)
coumarin  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
deoxynivalenol  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
dihydroartemisinin  (ISO)
disodium selenite  (ISO)
diuron  (ISO)
elemental selenium  (ISO)
fipronil  (EXP)
flavonoids  (EXP)
flutamide  (EXP)
folic acid  (ISO)
furan  (EXP)
furfural  (ISO)
gentamycin  (EXP)
glafenine  (EXP)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
miconazole  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
Propiverine  (EXP)
rac-lactic acid  (ISO)
rotenone  (EXP,ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (EXP,ISO)
sodium chloride  (ISO)
sodium fluoride  (ISO)
sunitinib  (ISO)
tetrachloromethane  (EXP,ISO)
titanium dioxide  (ISO)
trimellitic anhydride  (ISO)
troglitazone  (ISO)
tungsten  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)
zearalenone  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Structures of the human and Drosophila 80S ribosome. Anger AM, etal., Nature. 2013 May 2;497(7447):80-5. doi: 10.1038/nature12104.
2. The primary structure of rat ribosomal protein L14. Chan YL, etal., Biochem Biophys Res Commun 1996 May 15;222(2):427-31.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. Autoantibody against ribosomal protein L14 in patients with systemic lupus erythematosus. Hasegawa H, etal., Clin Exp Rheumatol. 2002 Mar-Apr;20(2):139-44.
6. Selective high-efficiency cross-linking of mammalian ribosomal proteins with cleavable thiol-directed heterobifunctional reagents: identification and binding directions of major protein complexes. Hultin T Biochim Biophys Acta. 1986 Aug 15;872(3):226-35.
7. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
8. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
9. GOA pipeline RGD automated data pipeline
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:12962325   PMID:18697920   PMID:19946888   PMID:20458337   PMID:21170055   PMID:21700703   PMID:22658674   PMID:22681889   PMID:25468996  


Genomics

Comparative Map Data
Rpl14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88129,163,620 - 129,166,745 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8129,163,317 - 129,167,459 (+)EnsemblGRCr8
mRatBN7.28120,286,035 - 120,289,160 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8120,284,645 - 120,289,064 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8125,863,219 - 125,866,076 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08124,062,237 - 124,065,094 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08121,904,654 - 121,907,538 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08129,240,528 - 129,243,400 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8129,240,528 - 129,243,402 (+)Ensemblrn6Rnor6.0
Rnor_5.08128,438,421 - 128,441,293 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48125,582,095 - 125,584,968 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8119,428,067 - 119,430,939 (+)NCBICelera
RGSC_v3.18125,601,831 - 125,604,704 (+)NCBI
Cytogenetic Map8q32NCBI
RPL14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38340,457,339 - 40,468,587 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl340,457,292 - 40,468,587 (+)Ensemblhg38GRCh38
GRCh37340,498,830 - 40,510,078 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36340,473,805 - 40,478,863 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34340,473,818 - 40,478,862NCBI
Celera340,441,631 - 40,446,697 (+)NCBICelera
Cytogenetic Map3p22.1NCBI
HuRef340,542,849 - 40,547,946 (+)NCBIHuRef
CHM1_1340,449,375 - 40,454,457 (+)NCBICHM1_1
T2T-CHM13v2.0340,472,412 - 40,483,675 (+)NCBIT2T-CHM13v2.0
Rpl14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399120,400,579 - 120,403,724 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9120,400,510 - 120,403,720 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm389120,571,517 - 120,574,653 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9120,571,444 - 120,574,654 (+)Ensemblmm10GRCm38
MGSCv379120,480,634 - 120,483,770 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv369120,420,214 - 120,423,350 (+)NCBIMGSCv36mm8
Celera9121,041,119 - 121,044,256 (+)NCBICelera
Cytogenetic Map9F4NCBI
cM Map971.74NCBI
Rpl14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542029,426,694 - 29,435,126 (-)Ensembl
ChiLan1.0NW_00495542029,430,757 - 29,434,669 (-)NCBIChiLan1.0ChiLan1.0
RPL14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2240,417,822 - 40,422,866 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1340,422,584 - 40,427,631 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0340,362,235 - 40,367,349 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1340,632,699 - 40,637,697 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl340,632,762 - 40,637,697 (+)EnsemblpanPan2panpan1.1
RPL14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1239,907,479 - 9,911,114 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl239,907,479 - 9,911,114 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha239,942,051 - 9,945,706 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02310,194,701 - 10,198,342 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2310,194,701 - 10,198,342 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12310,005,062 - 10,008,711 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02310,142,962 - 10,146,601 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02310,130,617 - 10,134,279 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Rpl14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118196,264,248 - 196,268,799 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647329,402,813 - 29,410,978 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647329,402,874 - 29,406,065 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100739087
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1156,689,050 - 56,689,768 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2163,408,784 - 63,409,444 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RPL14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1221,949,789 - 1,954,518 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl221,949,817 - 1,954,466 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041165,248,722 - 165,263,817 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rpl14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473078,282,230 - 78,288,647 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473078,284,389 - 78,288,242 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Rpl14
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v18111,785,221 - 111,788,450 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:12
Count of miRNA genes:12
Interacting mature miRNAs:12
Transcripts:ENSRNOT00000063787
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)8102413464132782436Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8103375781129871912Rat
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)8105462581132782436Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)891340911131690273Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)884192326129192326Rat

Markers in Region
RH143364  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28120,288,673 - 120,288,961 (+)MAPPERmRatBN7.2
Rnor_6.08129,243,167 - 129,243,454NCBIRnor6.0
Rnor_5.08128,441,060 - 128,441,347UniSTSRnor5.0
RGSC_v3.48125,584,732 - 125,585,019UniSTSRGSC3.4
Celera8119,430,706 - 119,430,993UniSTS
RH 3.4 Map81318.0UniSTS
Cytogenetic Map8q32UniSTS
RH139080  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28120,288,992 - 120,289,132 (+)MAPPERmRatBN7.2
Rnor_6.08129,243,486 - 129,243,625NCBIRnor6.0
Rnor_5.08128,441,379 - 128,441,518UniSTSRnor5.0
RGSC_v3.48125,585,051 - 125,585,190UniSTSRGSC3.4
Celera8119,431,025 - 119,431,164UniSTS
RH 3.4 Map81284.8UniSTS
Cytogenetic Map8q32UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_022949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC058470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC168728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X94242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000063787   ⟹   ENSRNOP00000061747
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8129,163,317 - 129,167,459 (+)Ensembl
mRatBN7.2 Ensembl8120,286,035 - 120,288,912 (+)Ensembl
Rnor_6.0 Ensembl8129,241,109 - 129,243,402 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000083427   ⟹   ENSRNOP00000073315
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8129,163,688 - 129,166,745 (+)Ensembl
mRatBN7.2 Ensembl8120,286,103 - 120,289,064 (+)Ensembl
Rnor_6.0 Ensembl8129,240,528 - 129,243,400 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000104670   ⟹   ENSRNOP00000080242
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8120,284,645 - 120,289,064 (+)Ensembl
RefSeq Acc Id: NM_022949   ⟹   NP_075238
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88129,163,620 - 129,166,745 (+)NCBI
mRatBN7.28120,286,035 - 120,289,160 (+)NCBI
Rnor_6.08129,240,528 - 129,243,400 (+)NCBI
Rnor_5.08128,438,421 - 128,441,293 (+)NCBI
RGSC_v3.48125,582,095 - 125,584,968 (+)RGD
Celera8119,428,067 - 119,430,939 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039082093   ⟹   XP_038938021
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88129,163,667 - 129,166,495 (+)NCBI
mRatBN7.28120,286,291 - 120,288,912 (+)NCBI
Protein Sequences
Protein RefSeqs NP_075238 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938021 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI68728 (Get FASTA)   NCBI Sequence Viewer  
  CAA63926 (Get FASTA)   NCBI Sequence Viewer  
  EDL76856 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000073315
GenBank Protein Q63507 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_075238   ⟸   NM_022949
- UniProtKB: B5DEM5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000061747   ⟸   ENSRNOT00000063787
Ensembl Acc Id: ENSRNOP00000073315   ⟸   ENSRNOT00000083427
RefSeq Acc Id: XP_038938021   ⟸   XM_039082093
- Peptide Label: isoform X1
- UniProtKB: A6I420 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000080242   ⟸   ENSRNOT00000104670
Protein Domains
Large ribosomal subunit protein eL14

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q63507-F1-model_v2 AlphaFold Q63507 1-214 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696387
Promoter ID:EPDNEW_R6910
Type:multiple initiation site
Name:Rpl14_1
Description:ribosomal protein L14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.08129,240,528 - 129,240,588EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621180 AgrOrtholog
BioCyc Gene G2FUF-28733 BioCyc
Ensembl Genes ENSRNOG00000019007 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000083427 ENTREZGENE
Gene3D-CATH 2.30.30.30 UniProtKB/Swiss-Prot
  6.10.250.2270 UniProtKB/Swiss-Prot
InterPro Rib_L2_dom2 UniProtKB/Swiss-Prot
  Ribosomal_L14e_dom UniProtKB/Swiss-Prot
  Ribosomal_protein_L14 UniProtKB/Swiss-Prot
  Translation_prot_SH3-like_sf UniProtKB/Swiss-Prot
NCBI Gene 65043 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L14 UniProtKB/Swiss-Prot
  PTHR11127 UniProtKB/Swiss-Prot
Pfam Ribosomal_L14e UniProtKB/Swiss-Prot
PhenoGen Rpl14 PhenoGen
RatGTEx ENSRNOG00000019007 RatGTEx
Superfamily-SCOP SSF50104 UniProtKB/Swiss-Prot
UniProt A0A0G2K570_RAT UniProtKB/TrEMBL
  A6I420 ENTREZGENE, UniProtKB/TrEMBL
  B5DEM5 ENTREZGENE, UniProtKB/TrEMBL
  F1LSW7_RAT UniProtKB/TrEMBL
  Q63507 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Rpl14  ribosomal protein L14      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Rpl14  ribosomal protein L14      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_homology has homology to a Drosophila L14 homolog whose mutation causes a Minute phenotype 633838
gene_other gene may be present in 6-8 copies 633838