Amh (anti-Mullerian hormone) - Rat Genome Database

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Gene: Amh (anti-Mullerian hormone) Rattus norvegicus
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Symbol: Amh
Name: anti-Mullerian hormone
RGD ID: 2108
Description: Enables transforming growth factor beta receptor binding activity. Involved in several processes, including negative regulation of ovarian follicle development; positive regulation of NF-kappaB transcription factor activity; and preantral ovarian follicle growth. Acts upstream of or within urogenital system development. Located in extracellular space. Human ortholog(s) of this gene implicated in disorder of sexual development; ovarian carcinoma; and persistent Mullerian duct syndrome. Orthologous to human AMH (anti-Mullerian hormone); PARTICIPATES IN cytokine mediated signaling pathway; transforming growth factor-beta superfamily mediated signaling pathway; INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: anti - Mullerian hormone; Anti - Mullerian hormone (Mulerian inhibiting substance); anti-Muellerian hormone; MIS; muellerian-inhibiting factor; muellerian-inhibiting substance
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr879,557,451 - 9,559,867 (-)NCBIGRCr8
mRatBN7.278,906,776 - 8,909,192 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl78,906,836 - 8,909,282 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx711,785,516 - 11,787,864 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0713,661,021 - 13,663,369 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0711,527,544 - 11,529,892 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0711,775,155 - 11,777,503 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl711,775,155 - 11,777,503 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0711,942,870 - 11,945,218 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4710,417,325 - 10,419,673 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1710,417,324 - 10,419,673 (-)NCBI
Celera77,089,574 - 7,091,922 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
Notes
Source
Original Reference(s)
AmhRatbreast cancer onsetISOAMH (Homo sapiens)2315637 RGD 
AmhRatdisorder of sexual development susceptibilityISOAMH (Homo sapiens)1601180Persistent Mullerian Duct Syndrome type I more ...RGD 
AmhRatgranulosa cell tumor disease_progressionISOAMH (Homo sapiens)2315639 RGD 
AmhRatobesity  ISOAMH (Homo sapiens)1601182protein:decreased expression:serumRGD 
AmhRatovarian carcinoma treatmentISOAMH (Homo sapiens)2315652 RGD 
AmhRatOvarian Neoplasms  ISOAMH (Homo sapiens)2315638mRNA and protein:increased expression:ovaryRGD 
AmhRatpolycystic ovary syndrome  ISOAMH (Homo sapiens)1601181protein:increased expression:serumRGD 
Object Symbol
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Term
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Reference
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Original Reference(s)
AmhRatgenetic disease  ISOAMH (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 and PMID:28492532
AmhRathereditary breast ovarian cancer syndrome  ISOAMH (Homo sapiens)8554872ClinVar Annotator: match by term: Breast-ovarian cancer more ...ClinVar 
AmhRatMoebius syndrome  ISOAMH (Homo sapiens)8554872ClinVar Annotator: match by term: Oromandibular-limb hypogenesis spectrumClinVarPMID:25741868 and PMID:28492532
AmhRatNeurodevelopmental Disorders  ISOAMH (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
AmhRatpersistent Mullerian duct syndrome  ISOAMH (Homo sapiens)8554872ClinVar more ...ClinVarPMID:11760020 more ...
AmhRatprimary ovarian insufficiency 16  ISOAMH (Homo sapiens)8554872ClinVar Annotator: match by term: Genetic non-acquired premature ovarian failureClinVar 
AmhRatprogressive myoclonus epilepsy 9  ISOAMH (Homo sapiens)8554872ClinVar Annotator: match by term: Progressive myoclonic epilepsy type 9ClinVarPMID:28492532
Object Symbol
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Term
Qualifier
Evidence
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Reference
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Original Reference(s)
AmhRatFemale Urogenital Diseases  ISOAMH (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16002989
AmhRatpersistent Mullerian duct syndrome  ISOAMH (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
Object Symbol
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Original Reference(s)
AmhRatpersistent Mullerian duct syndrome  ISOAMH (Homo sapiens)7240710 OMIM 

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Original Reference(s)
AmhRat(-)-epigallocatechin 3-gallate multiple interactionsISOAMH (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in increased expression of AMH mRNACTDPMID:22079256
AmhRat1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane increases expressionEXP 64804642 more ...CTDPMID:17170213
AmhRat17alpha-ethynylestradiol decreases expressionEXP 6480464Ethinyl Estradiol results in decreased expression of AMH mRNACTDPMID:15834898
AmhRat17alpha-ethynylestradiol multiple interactionsISOAmh (Mus musculus)6480464[Ibuprofen co-treated with hydroxyibuprofen co-treated with Diclofenac co-treated with Ethinyl Estradiol] results in decreased expression of AMH mRNACTDPMID:37844793
AmhRat17beta-estradiol increases expressionISOAMH (Homo sapiens)6480464Estradiol results in increased expression of AMH mRNACTDPMID:21826169
AmhRat17beta-estradiol multiple interactionsEXP 6480464Estradiol inhibits the reaction [Cisplatin results in decreased expression of AMH protein]CTDPMID:36567042
AmhRat17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of AMH mRNA and Estradiol results in increased expression of AMH proteinCTDPMID:29055809
AmhRat17beta-hydroxy-17-methylestra-4,9,11-trien-3-one multiple interactionsISOAMH (Homo sapiens)6480464AMH protein inhibits the reaction [Metribolone results in increased expression of KLK3 mRNA]CTDPMID:16740653
AmhRat17beta-hydroxy-5alpha-androstan-3-one increases secretionEXP 6480464Dihydrotestosterone results in increased secretion of AMH proteinCTDPMID:25667201
AmhRat17beta-hydroxy-5alpha-androstan-3-one multiple interactionsEXP 6480464resveratrol inhibits the reaction [Dihydrotestosterone results in increased secretion of AMH protein]CTDPMID:25667201
AmhRat2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOAmh (Mus musculus)6480464[2 more ...CTDPMID:25510870
AmhRat2,2',5,5'-tetrachlorobiphenyl multiple interactionsISOAmh (Mus musculus)6480464[2 more ...CTDPMID:25510870
AmhRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of AMH mRNACTDPMID:15590112 and PMID:32109520
AmhRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of AMH mRNACTDPMID:32234510
AmhRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of AMH proteinCTDPMID:32234510
AmhRat2-methylcholine affects expressionISOAMH (Homo sapiens)6480464beta-methylcholine affects the expression of AMH mRNACTDPMID:21179406
AmhRat3,3',4,4',5-pentachlorobiphenyl decreases secretionEXP 64804643 more ...CTDPMID:34256052
AmhRat3,3',5-triiodo-L-thyronine multiple interactionsEXP 6480464Triiodothyronine affects the reaction [Propylthiouracil affects the expression of AMH mRNA]CTDPMID:7819453
AmhRat4-nonylphenol decreases expressionISOAmh (Mus musculus)64804644-nonylphenol analog results in decreased expression of AMH mRNACTDPMID:27086933
AmhRat4-vinylcyclohexene dioxide decreases expressionEXP 64804644-vinyl-1-cyclohexene dioxide results in decreased expression of AMH mRNA and 4-vinyl-1-cyclohexene dioxide results in decreased expression of AMH proteinCTDPMID:20816688 more ...

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Biological Process
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Original Reference(s)
AmhRatanti-Mullerian hormone receptor signaling pathway involved_inIEAUniProtKB:P03971 and ensembl:ENSP000002214961600115GO_REF:0000107EnsemblGO_REF:0000107
AmhRatanti-Mullerian hormone receptor signaling pathway involved_inISOAMH (Homo sapiens)1624291 PMID:20861221RGDPMID:20861221
AmhRatanti-Mullerian hormone receptor signaling pathway involved_inISSUniProtKB:P039711600115GO_REF:0000024UniProtGO_REF:0000024
AmhRatcell differentiation involved_inIEAUniProtKB-KW:KW-02211600115GO_REF:0000043UniProtGO_REF:0000043
AmhRatgonad development involved_inIEAInterPro:IPR0067991600115GO_REF:0000002InterProGO_REF:0000002
AmhRatgonadal mesoderm development involved_inIEAUniProtKB-KW:KW-03341600115GO_REF:0000043UniProtGO_REF:0000043
AmhRatLeydig cell differentiation involved_inISSUniProtKB:P271061600115GO_REF:0000024UniProtGO_REF:0000024
AmhRatLeydig cell differentiation involved_inISOAmh (Mus musculus)1624291 PMID:9435237RGDPMID:9435237
AmhRatMullerian duct regression  TAS 1298546 RGD 
AmhRatMullerian duct regression involved_inIEAUniProtKB:P03971 and ensembl:ENSP000002214961600115GO_REF:0000107EnsemblGO_REF:0000107
AmhRatMullerian duct regression involved_inIBAPANTHER:PTN000385095 and UniProtKB:P039711600115GO_REF:0000033GO_CentralGO_REF:0000033
AmhRatMullerian duct regression involved_inISOAMH (Homo sapiens)1624291 PMID:14695376 and PMID:34155118RGDPMID:14695376 and PMID:34155118
AmhRatMullerian duct regression involved_inISSUniProtKB:P039711600115GO_REF:0000024UniProtGO_REF:0000024
AmhRatnegative regulation of ovarian follicle development involved_inISOAmh (Mus musculus)1624291 PMID:11861535RGDPMID:11861535
AmhRatnegative regulation of ovarian follicle development  IDA 2315646 RGD 
AmhRatovarian follicle development involved_inISOAmh (Mus musculus)1624291 PMID:11606457RGDPMID:11606457
AmhRatpositive regulation of gene expression involved_inISOAMH (Homo sapiens)1624291 PMID:14695376RGDPMID:14695376
AmhRatpositive regulation of gene expression involved_inIEAUniProtKB:P03971 and ensembl:ENSP000002214961600115GO_REF:0000107EnsemblGO_REF:0000107
AmhRatpositive regulation of NF-kappaB transcription factor activity  IMP 70295 RGD 
AmhRatpositive regulation of SMAD protein signal transduction involved_inISOAMH (Homo sapiens)1624291 PMID:20861221RGDPMID:20861221
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Cellular Component

  
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Original Reference(s)
AmhRatcytoplasm located_inISOAmh (Mus musculus)1624291 PMID:15789443 and PMID:16207837RGDPMID:15789443 and PMID:16207837
AmhRatextracellular region located_inIEAUniProtKB-KW:KW-09641600115GO_REF:0000043UniProtGO_REF:0000043
AmhRatextracellular region located_inIEAUniProtKB-SubCell:SL-02431600115GO_REF:0000044UniProtGO_REF:0000044
AmhRatextracellular space located_inIDA 8554753PMID:11376112MGI 
AmhRatextracellular space  IDA 2315641 RGD 
AmhRatextracellular space located_inIEAUniProtKB:P03971 and ensembl:ENSP000002214961600115GO_REF:0000107EnsemblGO_REF:0000107
AmhRatextracellular space is_active_inIBAPANTHER:PTN000385095 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
AmhRatextracellular space located_inISOAMH (Homo sapiens)1624291 PMID:3754790RGDPMID:3754790

Molecular Function
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Imported Annotations - KEGG (archival)

Object Symbol
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Reference
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Source
Original Reference(s)
AmhRatcytokine mediated signaling pathway  IEA 6907045 KEGGrno:04060
AmhRattransforming growth factor-beta superfamily mediated signaling pathway  IEA 6907045 KEGGrno:04350

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Reference Title
Reference Citation
1. Parabens inhibit the early phase of folliculogenesis and steroidogenesis in the ovaries of neonatal rats. Ahn HJ, etal., Mol Reprod Dev. 2012 Sep;79(9):626-36. doi: 10.1002/mrd.22070. Epub 2012 Jul 26.
2. Acute effects of metformin therapy include improvement of insulin resistance and ovarian morphology. Bayrak A, etal., Fertil Steril. 2007 Jan 12;.
3. Regulation of gonadotropin gene expression by Mullerian inhibiting substance. Bedecarrats GY, etal., Proc Natl Acad Sci U S A 2003 Aug 5;100(16):9348-53. Epub 2003 Jul 23.
4. Anti-Mullerian hormone inhibits initiation of growth of human primordial ovarian follicles in vitro. Carlsson IB, etal., Hum Reprod. 2006 Sep;21(9):2223-7. Epub 2006 May 23.
5. Variants of the anti-Mullerian hormone gene in a compound heterozygote with the persistent Mullerian duct syndrome and his family. Carre-Eusebe D, etal., Hum Genet. 1992 Dec;90(4):389-94.
6. Serum Mullerian Inhibiting Substance/anti-Mullerian hormone levels in patients with adult granulosa cell tumors directly correlate with aggregate tumor mass as determined by pathology or radiology. Chang HL, etal., Gynecol Oncol. 2009 Jul;114(1):57-60. Epub 2009 Apr 8.
7. Prospective case-control study of serum mullerian inhibiting substance and breast cancer risk. Dorgan JF, etal., J Natl Cancer Inst. 2009 Nov 4;101(21):1501-9. Epub 2009 Oct 9.
8. Association of anti-mullerian hormone levels with obesity in late reproductive-age women. Freeman EW, etal., Fertil Steril. 2007 Jan;87(1):101-6. Epub 2006 Nov 15.
9. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
10. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
11. Isolation of the rat gene for Mullerian inhibiting substance. Haqq C, etal., Genomics 1992 Apr;12(4):665-9.
12. Increased expression of Mullerian-inhibiting substance correlates with inhibition of follicular growth in the developing ovary of rats treated with E2 benzoate. Ikeda Y, etal., Endocrinology 2002 Jan;143(1):304-12.
13. Parabens Accelerate Ovarian Dysfunction in a 4-Vinylcyclohexene Diepoxide-Induced Ovarian Failure Model. Lee JH, etal., Int J Environ Res Public Health. 2017 Feb 8;14(2). pii: ijerph14020161. doi: 10.3390/ijerph14020161.
14. Mullerian inhibitory substance induces growth of rat preantral ovarian follicles. McGee EA, etal., Biol Reprod. 2001 Jan;64(1):293-8.
15. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
16. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
17. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
18. Recombinant human Mullerian inhibiting substance inhibits long-term growth of MIS type II receptor-directed transgenic mouse ovarian cancers in vivo. Pieretti-Vanmarcke R, etal., Clin Cancer Res. 2006 Mar 1;12(5):1593-8.
19. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
20. GOA pipeline RGD automated data pipeline
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PMID:14585814   PMID:14695376   PMID:14750901   PMID:15789443   PMID:16207837   PMID:20816688   PMID:21637711   PMID:25667201   PMID:26753790   PMID:27030385   PMID:31724927   PMID:32387527  
PMID:33709094   PMID:37633225  



Amh
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr879,557,451 - 9,559,867 (-)NCBIGRCr8
mRatBN7.278,906,776 - 8,909,192 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl78,906,836 - 8,909,282 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx711,785,516 - 11,787,864 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0713,661,021 - 13,663,369 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0711,527,544 - 11,529,892 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0711,775,155 - 11,777,503 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl711,775,155 - 11,777,503 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0711,942,870 - 11,945,218 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4710,417,325 - 10,419,673 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1710,417,324 - 10,419,673 (-)NCBI
Celera77,089,574 - 7,091,922 (-)NCBICelera
Cytogenetic Map7q11NCBI
AMH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38192,249,323 - 2,252,073 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl192,249,309 - 2,252,073 (+)EnsemblGRCh38hg38GRCh38
GRCh37192,249,322 - 2,252,072 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36192,200,113 - 2,203,072 (+)NCBINCBI36Build 36hg18NCBI36
Build 34192,200,121 - 2,203,071NCBI
Celera192,183,289 - 2,186,248 (+)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef192,020,229 - 2,023,188 (+)NCBIHuRef
CHM1_1192,248,616 - 2,251,575 (+)NCBICHM1_1
T2T-CHM13v2.0192,222,966 - 2,225,716 (+)NCBIT2T-CHM13v2.0
Amh
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391080,641,074 - 80,643,513 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1080,641,077 - 80,643,482 (+)EnsemblGRCm39 Ensembl
GRCm381080,805,240 - 80,807,679 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1080,805,243 - 80,807,648 (+)EnsemblGRCm38mm10GRCm38
MGSCv371080,267,993 - 80,270,393 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361080,208,377 - 80,210,777 (+)NCBIMGSCv36mm8
Celera1081,823,618 - 81,826,018 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
Amh
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554955,893,446 - 5,895,912 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554955,893,375 - 5,896,152 (-)NCBIChiLan1.0ChiLan1.0
AMH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2206,633,643 - 6,636,931 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1195,862,984 - 5,866,275 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0191,260,219 - 1,263,395 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1192,231,984 - 2,236,130 (+)NCBIpanpan1.1PanPan1.1panPan2
AMH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12056,785,960 - 56,788,815 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2056,581,099 - 56,583,889 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02057,518,896 - 57,521,686 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2057,518,814 - 57,521,686 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12056,570,917 - 56,573,707 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02057,056,052 - 57,058,835 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02057,256,543 - 57,259,332 (-)NCBIUU_Cfam_GSD_1.0
Amh
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118216,489,037 - 216,492,075 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365881,343,085 - 1,345,654 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365881,342,791 - 1,345,746 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AMH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl276,414,427 - 76,418,312 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1276,415,564 - 76,418,315 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2276,982,764 - 76,983,243 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap2q14-q21NCBI
AMH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.162,047,756 - 2,051,073 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl62,048,319 - 2,050,958 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660816,669,905 - 6,672,763 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Amh
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248286,631,420 - 6,637,732 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248286,635,192 - 6,638,104 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Amh
6 total Variants

Predicted Target Of
Summary Value
Count of predictions:42
Count of miRNA genes:40
Interacting mature miRNAs:42
Transcripts:ENSRNOT00000026220
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 13 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7144782185Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)766427026029351Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7532901950329019Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
10755438Coatc9Coat color QTL 90coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7352928048529280Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7131962314Rat
10059592Kidm45Kidney mass QTL 453.950.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)7757398552573985Rat
2317047Wbc4White blood cell count QTL 40.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)7135342956Rat
10755440Coatc10Coat color QTL 100coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7749649952496499Rat

1 to 10 of 13 rows
PMC203309P1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.278,907,628 - 8,907,816 (+)MAPPERmRatBN7.2
Rnor_6.0711,775,948 - 11,776,135NCBIRnor6.0
Rnor_5.0711,943,663 - 11,943,850UniSTSRnor5.0
RGSC_v3.4710,418,118 - 10,418,305UniSTSRGSC3.4
Celera77,090,367 - 7,090,554UniSTS
Cytogenetic Map7q11UniSTS
UniSTS:547550  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.278,908,033 - 8,908,431 (+)MAPPERmRatBN7.2
Rnor_6.0711,776,353 - 11,776,750NCBIRnor6.0
Rnor_5.0711,944,068 - 11,944,465UniSTSRnor5.0
Celera77,090,772 - 7,091,169UniSTS
Cytogenetic Map7q11UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 47 112 80 77 48 25 48 6 199 95 92 39 60 29



Ensembl Acc Id: ENSRNOT00000026220   ⟹   ENSRNOP00000026220
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl78,906,836 - 8,909,282 (-)Ensembl
Rnor_6.0 Ensembl711,775,155 - 11,777,503 (-)Ensembl
RefSeq Acc Id: NM_012902   ⟹   NP_037034
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr879,557,451 - 9,559,867 (-)NCBI
mRatBN7.278,906,776 - 8,909,192 (-)NCBI
Rnor_6.0711,775,155 - 11,777,503 (-)NCBI
Rnor_5.0711,942,870 - 11,945,218 (-)NCBI
RGSC_v3.4710,417,325 - 10,419,673 (-)RGD
Celera77,089,574 - 7,091,922 (-)RGD
Sequence:
Protein RefSeqs NP_037034 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB22104 (Get FASTA)   NCBI Sequence Viewer  
  EDL89230 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000026220
  ENSRNOP00000026220.1
GenBank Protein P49000 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_037034   ⟸   NM_012902
- Peptide Label: precursor
- UniProtKB: P49000 (UniProtKB/Swiss-Prot),   A6K8G0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000026220   ⟸   ENSRNOT00000026220
TGF-beta family profile

Name Modeler Protein Id AA Range Protein Structure
AF-P49000-F1-model_v2 AlphaFold P49000 1-553 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13695003
Promoter ID:EPDNEW_R5528
Type:single initiation site
Name:Amh_1
Description:anti-Mullerian hormone
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0711,777,488 - 11,777,548EPDNEW


1 to 25 of 25 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-34968 BioCyc
Ensembl Genes ENSRNOG00000019377 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000026220 ENTREZGENE
  ENSRNOT00000026220.3 UniProtKB/Swiss-Prot
Gene3D-CATH 2.10.90.10 UniProtKB/Swiss-Prot
InterPro AMH_N UniProtKB/Swiss-Prot
  Cystine-knot_cytokine UniProtKB/Swiss-Prot
  Muellerian-inhibiting_factor UniProtKB/Swiss-Prot
  TGF-b_C UniProtKB/Swiss-Prot
  TGFb_CS UniProtKB/Swiss-Prot
KEGG Report rno:25378 UniProtKB/Swiss-Prot
NCBI Gene 25378 ENTREZGENE
PANTHER MUELLERIAN-INHIBITING FACTOR UniProtKB/Swiss-Prot
  PTHR15009 UniProtKB/Swiss-Prot
Pfam AMH_N UniProtKB/Swiss-Prot
  TGF_beta UniProtKB/Swiss-Prot
PhenoGen Amh PhenoGen
PIRSF Muellerian-inhibiting_factor UniProtKB/Swiss-Prot
PROSITE TGF_BETA_1 UniProtKB/Swiss-Prot
  TGF_BETA_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000019377 RatGTEx
SMART TGFB UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57501 UniProtKB/Swiss-Prot
UniProt A6K8G0 ENTREZGENE, UniProtKB/TrEMBL
  MIS_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-02-26 Amh  anti-Mullerian hormone    anti-mullerian hormone  Symbol and Name status set to approved 625702 APPROVED
2002-06-10 Amh  anti-mullerian hormone      Name updated 70585 PROVISIONAL

Note Type Note Reference
gene_disease inhibits human breast cancer cell growth in vitro through interference with cell cycle progression and induction of apoptosis 70295
gene_disease inhibits human breast cancer cell growth in vitro through interference with cell cycle progression and induction of apoptosis 70576
gene_expression produced by Sertoli cells of the testis (males); in females, synthesized by granulosa cells of the ovary and persists until menopause 70295
gene_expression produced by Sertoli cells of the testis (males); in females, synthesized by granulosa cells of the ovary and persists until menopause 70576
gene_expression expressed in the granulosa small growing follicles in the ovary 70295
gene_expression expressed in the granulosa small growing follicles in the ovary 70576
gene_expression expression is high in the 1-day-postnatal testis and decreases to a low level in the adult testis 1298546
gene_function testicular glycoprotein ligand for MIS receptor II that causes regression of Mullerian duct, the fallopian tubes and part of the vagina 1298546
gene_process responsible for the regression of Mullerian duct in male embryos 70295
gene_process responsible for the regression of Mullerian duct in male embryos 70576
gene_process plays a key role in male sexual development and differentiation 1298546
gene_process regulates such hypothalamic/pituitary/gonadal axis processes as steroidogenesis, breast and prostate growth, and ovarian follicle recruitment 1298576
gene_process enhances the effect of gonadotropin-releasing hormone (GnRH) agonist on the FSHbeta gene promoter and synergizes with the GnRH agonist to stimulate LHbeta gene promoter activity 1298576
gene_process regulates follicular growth 70576
gene_process contributes to ovarian development 70576
gene_process impedes cell cycle progression and apoptosis induction and thus breast cancer cell growth 70295
gene_process induces NFkappaB to bind to its cognate DNA sequence 70295
gene_process enhances IEX-1S mRNA expression in breast tissue 70295
gene_process increases apoptosis in the mouse mammary ductal epithelium 70295
gene_process potential endogenous hormonal regulator of NFkappaB signaling and growth in breast tissue 70295
gene_product member of the transforming growth factor b family  
gene_regulation mRNA and protein expression in ovary increased by E2 benzoate; reduction is correlated with the inhibotory effect of EB on the follicular stratification 70295
gene_regulation mRNA and protein expression in ovary increased by E2 benzoate; reduction is correlated with the inhibotory effect of EB on the follicular stratification 70576
gene_regulation transcription is estrogen responsive 70576
gene_regulation activated by steroidogenic factor 1 70576