Atp13a3 (ATPase 13A3) - Rat Genome Database

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Gene: Atp13a3 (ATPase 13A3) Rattus norvegicus
Analyze
Symbol: Atp13a3
Name: ATPase 13A3
RGD ID: 1590881
Description: Predicted to enable ATPase-coupled monoatomic cation transmembrane transporter activity; P-type transmembrane transporter activity; and polyamine transmembrane transporter activity. Predicted to be involved in intracellular calcium ion homeostasis and polyamine transmembrane transport. Predicted to be located in early endosome membrane and recycling endosome membrane. Predicted to be active in late endosome membrane. Human ortholog(s) of this gene implicated in primary pulmonary hypertension. Orthologous to human ATP13A3 (ATPase 13A3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ATPase type 13A3; LOC360728; polyamine-transporting ATPase 13A3; probable cation-transporting ATPase 13A3; similar to type V P-type ATPase isoform 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81183,860,725 - 83,946,899 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1183,870,218 - 83,944,662 (+)EnsemblGRCr8
mRatBN7.21170,364,998 - 70,442,005 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1170,365,322 - 70,441,235 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1179,209,390 - 79,283,692 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01171,847,200 - 71,918,446 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01170,898,497 - 70,972,793 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01173,936,750 - 73,963,852 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1173,936,750 - 73,963,852 (+)Ensemblrn6Rnor6.0
Rnor_5.01176,998,192 - 77,025,060 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41172,263,084 - 72,290,643 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1169,338,565 - 69,365,886 (+)NCBICelera
Cytogenetic Map11q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-palmitoylglycerol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acetamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amphetamine  (EXP)
aristolochic acid A  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
chlorohydrocarbon  (EXP)
chrysene  (ISO)
cisplatin  (ISO)
copper(II) sulfate  (ISO)
DDE  (ISO)
dexamethasone  (ISO)
diallyl trisulfide  (ISO)
dibutyl phthalate  (ISO)
doxorubicin  (ISO)
folic acid  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
geldanamycin  (ISO)
gentamycin  (EXP)
indometacin  (ISO)
methylmercury chloride  (EXP,ISO)
nickel atom  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
resveratrol  (ISO)
Salinomycin  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sotorasib  (ISO)
succimer  (ISO)
tamibarotene  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
tetraphene  (ISO)
thallium(I) acetate  (ISO)
thimerosal  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
trametinib  (ISO)
triphenyl phosphate  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. A mosaic activating mutation in AKT1 associated with the Proteus syndrome. Lindhurst MJ, etal., N Engl J Med. 2011 Aug 18;365(7):611-9. Epub 2011 Jul 27.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19946888   PMID:33310703  


Genomics

Comparative Map Data
Atp13a3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81183,860,725 - 83,946,899 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1183,870,218 - 83,944,662 (+)EnsemblGRCr8
mRatBN7.21170,364,998 - 70,442,005 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1170,365,322 - 70,441,235 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1179,209,390 - 79,283,692 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01171,847,200 - 71,918,446 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01170,898,497 - 70,972,793 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01173,936,750 - 73,963,852 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1173,936,750 - 73,963,852 (+)Ensemblrn6Rnor6.0
Rnor_5.01176,998,192 - 77,025,060 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41172,263,084 - 72,290,643 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1169,338,565 - 69,365,886 (+)NCBICelera
Cytogenetic Map11q22NCBI
ATP13A3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383194,402,677 - 194,494,334 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3194,402,672 - 194,498,364 (-)Ensemblhg38GRCh38
GRCh373194,123,406 - 194,207,731 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363195,604,692 - 195,670,257 (-)NCBIBuild 36Build 36hg18NCBI36
Celera3192,538,810 - 192,604,327 (-)NCBICelera
Cytogenetic Map3q29NCBI
HuRef3191,502,927 - 191,568,841 (-)NCBIHuRef
CHM1_13194,085,425 - 194,151,835 (-)NCBICHM1_1
T2T-CHM13v2.03197,101,099 - 197,192,872 (-)NCBIT2T-CHM13v2.0
Atp13a3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391630,131,241 - 30,207,674 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1630,131,241 - 30,224,793 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381630,312,423 - 30,388,871 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1630,312,423 - 30,405,975 (-)Ensemblmm10GRCm38
MGSCv371630,312,509 - 30,388,616 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361630,232,149 - 30,325,722 (-)NCBIMGSCv36mm8
Celera1630,819,534 - 30,894,748 (-)NCBICelera
Cytogenetic Map16B2NCBI
cM Map1621.26NCBI
Atp13a3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542014,295,768 - 14,375,325 (+)Ensembl
ChiLan1.0NW_00495542014,295,844 - 14,375,325 (+)NCBIChiLan1.0ChiLan1.0
ATP13A3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22192,324,642 - 192,424,715 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13192,329,359 - 192,429,436 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03191,698,896 - 191,782,643 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13202,013,625 - 202,096,319 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3202,013,633 - 202,096,324 (-)EnsemblpanPan2panpan1.1
ATP13A3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13331,196,666 - 31,294,880 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3331,197,343 - 31,293,826 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3331,226,003 - 31,320,688 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03331,455,378 - 31,553,674 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3331,481,012 - 31,553,660 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13331,249,819 - 31,344,727 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03331,283,607 - 31,378,336 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03331,910,811 - 32,005,691 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Atp13a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602123,849,430 - 123,923,827 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936711354,020 - 397,145 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936711325,978 - 400,374 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP13A3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13131,391,798 - 131,493,623 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113131,391,793 - 131,476,123 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213140,973,289 - 141,022,702 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATP13A3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11588,497,643 - 88,584,833 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1588,497,648 - 88,557,494 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604162,184,585 - 62,271,757 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atp13a3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473063,310,273 - 63,379,978 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473063,290,423 - 63,378,868 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Atp13a3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1415,226,947 - 15,279,152 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Atp13a3
285 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:153
Count of miRNA genes:114
Interacting mature miRNAs:126
Transcripts:ENSRNOT00000002350
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)117330848796070872Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)114644316891443168Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)115892833699753367Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113294306789836615Rat
1549848Bvd6Brain ventricular dilatation QTL 63.10.0001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)117961851999753367Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)117385089499753367Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)115893182292356038Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)115441539196071021Rat
1354656Bvd3Brain ventricular dilatation QTL 33.640.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)118295102896351019Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)115775483796071021Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)116796218499753367Rat
631506Bp104Blood pressure QTL 1042.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)117330831599753367Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)116859932196497754Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)116985594399753367Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)115107102196071021Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000002350   ⟹   ENSRNOP00000002350
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1173,936,750 - 73,963,852 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000098527   ⟹   ENSRNOP00000089051
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1183,870,218 - 83,944,517 (+)Ensembl
mRatBN7.2 Ensembl1170,365,322 - 70,441,235 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108436   ⟹   ENSRNOP00000090335
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1183,870,218 - 83,944,662 (+)Ensembl
mRatBN7.2 Ensembl1170,365,322 - 70,441,235 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000164180   ⟹   ENSRNOP00000111054
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1183,870,218 - 83,944,662 (+)Ensembl
RefSeq Acc Id: NM_001109369   ⟹   NP_001102839
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,870,218 - 83,944,517 (+)NCBI
mRatBN7.21170,365,322 - 70,439,623 (+)NCBI
Rnor_6.01173,936,750 - 73,963,852 (+)NCBI
Rnor_5.01176,998,192 - 77,025,060 (+)NCBI
RGSC_v3.41172,263,084 - 72,290,643 (+)ENTREZGENE
Celera1169,338,565 - 69,365,886 (+)ENTREZGENE
Sequence:
RefSeq Acc Id: XM_039088615   ⟹   XP_038944543
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,869,893 - 83,946,899 (+)NCBI
mRatBN7.21170,364,998 - 70,442,005 (+)NCBI
RefSeq Acc Id: XM_039088616   ⟹   XP_038944544
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,869,893 - 83,946,899 (+)NCBI
mRatBN7.21170,364,998 - 70,442,005 (+)NCBI
RefSeq Acc Id: XM_039088617   ⟹   XP_038944545
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,869,893 - 83,946,899 (+)NCBI
mRatBN7.21170,364,998 - 70,442,005 (+)NCBI
RefSeq Acc Id: XM_039088618   ⟹   XP_038944546
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,869,893 - 83,936,925 (+)NCBI
mRatBN7.21170,364,998 - 70,432,027 (+)NCBI
RefSeq Acc Id: XM_039088619   ⟹   XP_038944547
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,904,100 - 83,946,899 (+)NCBI
mRatBN7.21170,399,213 - 70,442,005 (+)NCBI
RefSeq Acc Id: XM_063270760   ⟹   XP_063126830
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,860,725 - 83,946,899 (+)NCBI
RefSeq Acc Id: XM_063270761   ⟹   XP_063126831
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,869,893 - 83,946,899 (+)NCBI
RefSeq Acc Id: NP_001102839   ⟸   NM_001109369
- UniProtKB: A0A8I6AAY5 (UniProtKB/TrEMBL),   A6JRU7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000002350   ⟸   ENSRNOT00000002350
RefSeq Acc Id: XP_038944544   ⟸   XM_039088616
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AAY5 (UniProtKB/TrEMBL),   A0A8I6ADK9 (UniProtKB/TrEMBL),   A6JRU6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038944543   ⟸   XM_039088615
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AAY5 (UniProtKB/TrEMBL),   A0A8I6ADK9 (UniProtKB/TrEMBL),   A6JRU6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038944545   ⟸   XM_039088617
- Peptide Label: isoform X3
- UniProtKB: A0A8I6AAY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038944546   ⟸   XM_039088618
- Peptide Label: isoform X4
- UniProtKB: A0A8I6AAY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038944547   ⟸   XM_039088619
- Peptide Label: isoform X5
Ensembl Acc Id: ENSRNOP00000089051   ⟸   ENSRNOT00000098527
Ensembl Acc Id: ENSRNOP00000090335   ⟸   ENSRNOT00000108436
RefSeq Acc Id: XP_063126830   ⟸   XM_063270760
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ADK9 (UniProtKB/TrEMBL),   A6JRU6 (UniProtKB/TrEMBL),   A0A8I6AAY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063126831   ⟸   XM_063270761
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AAY5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000111054   ⟸   ENSRNOT00000164180
Protein Domains
Cation-transporting P-type ATPase N-terminal   P5B-type ATPase N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V677-F1-model_v2 AlphaFold G3V677 1-134 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1590881 AgrOrtholog
BioCyc Gene G2FUF-21004 BioCyc
Ensembl Genes ENSRNOG00000001724 Ensembl
  ENSRNOG00000066681 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000098527 ENTREZGENE
  ENSRNOT00000098527.2 UniProtKB/TrEMBL
  ENSRNOT00000108436 ENTREZGENE
  ENSRNOT00000108436.2 UniProtKB/TrEMBL
  ENSRNOT00000164180 ENTREZGENE
  ENSRNOT00000164180.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.1110.10 UniProtKB/TrEMBL
  3.40.50.1000 UniProtKB/TrEMBL
  Calcium-transporting ATPase, cytoplasmic transduction domain A UniProtKB/TrEMBL
  Calcium-transporting ATPase, transmembrane domain UniProtKB/TrEMBL
InterPro ATPase_P-typ_cation-transptr_N UniProtKB/TrEMBL
  ATPase_P-typ_cyto_dom_N UniProtKB/TrEMBL
  ATPase_P-typ_P_site UniProtKB/TrEMBL
  ATPase_P-typ_TM_dom_sf UniProtKB/TrEMBL
  ATPase_P-typ_transduc_dom_A_sf UniProtKB/TrEMBL
  HAD-like_sf UniProtKB/TrEMBL
  HAD_sf UniProtKB/TrEMBL
  P-type_TPase_V UniProtKB/TrEMBL
  P5A-ATPase_N UniProtKB/TrEMBL
  P5B-type_ATPase UniProtKB/TrEMBL
  P_typ_ATPase UniProtKB/TrEMBL
  P_typ_ATPase_HD_dom UniProtKB/TrEMBL
KEGG Report rno:678704 UniProtKB/TrEMBL
NCBI Gene Atp13a3 ENTREZGENE
PANTHER CATION-TRANSPORTING ATPASE-RELATED UniProtKB/TrEMBL
  POLYAMINE-TRANSPORTING ATPASE 13A3 UniProtKB/TrEMBL
Pfam Cation_ATPase UniProtKB/TrEMBL
  Cation_ATPase_N UniProtKB/TrEMBL
  E1-E2_ATPase UniProtKB/TrEMBL
  P5-ATPase UniProtKB/TrEMBL
PhenoGen Atp13a3 PhenoGen
PRINTS CATATPASE UniProtKB/TrEMBL
PROSITE ATPASE_E1_E2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001724 RatGTEx
  ENSRNOG00000066681 RatGTEx
Superfamily-SCOP SSF56784 UniProtKB/TrEMBL
  SSF81653 UniProtKB/TrEMBL
  SSF81660 UniProtKB/TrEMBL
  SSF81665 UniProtKB/TrEMBL
UniProt A0A8I6AAY5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ADK9 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LXC3_RAT UniProtKB/TrEMBL
  A6JRU6 ENTREZGENE, UniProtKB/TrEMBL
  A6JRU7 ENTREZGENE, UniProtKB/TrEMBL
  A6JRV0_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-17 Atp13a3  ATPase 13A3  Atp13a3  ATPase type 13A3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-10-27 Atp13a3  ATPase type 13A3  LOC678704  hypothetical protein LOC678704  Data merged from RGD:1596980 737654 APPROVED
2008-03-05 Atp13a3  ATPase type 13A3  LOC360728  similar to type V P-type ATPase isoform 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC678704  hypothetical protein LOC678704      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC360728  similar to type V P-type ATPase isoform 3      Symbol and Name status set to provisional 70820 PROVISIONAL