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Gene: C14h1orf146 (similar to human chromosome 1 open reading frame 146) Rattus norvegicus

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Symbol:

C14h1orf146 (Ensembl: 1700028K03Rik)

Name:

similar to human chromosome 1 open reading frame 146

RGD ID:

1586315

Description:

Predicted to be involved in reciprocal meiotic recombination and synaptonemal complex assembly. Predicted to be active in chromosome. Orthologous to human C1orf146 (chromosome 1 open reading frame 146); INTERACTS WITH bisphenol A; cadmium dichloride; glyphosate.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC689986; LOC689986; uncharacterized protein C1orf146 homolog; uncharacterized protein LOC689986

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	2,375,311 - 2,395,331 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	14	2,374,948 - 2,386,112 (-)	Ensembl				GRCr8
mRatBN7.2	14	2,230,404 - 2,250,420 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	2,231,451 - 2,270,782 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	14	2,109,328 - 2,152,988 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	3,411,143 - 3,454,799 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	2,108,678 - 2,148,055 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	3,247,640 - 3,288,017 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	3,248,080 - 3,288,017 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	14	3,251,076 - 3,291,453 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	14	2,790,182 - 2,829,512 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	14	2,250,008 - 2,289,344 (-)	NCBI		Celera
Cytogenetic Map	14	p22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

male infertility (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP)

glyphosate (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

reciprocal meiotic recombination (ISO)

synaptonemal complex assembly (IEA,ISO)

Cellular Component

chromosome (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:23844656

Genomics

Comparative Map Data

C14h1orf146
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	2,375,311 - 2,395,331 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	14	2,374,948 - 2,386,112 (-)	Ensembl				GRCr8
mRatBN7.2	14	2,230,404 - 2,250,420 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	2,231,451 - 2,270,782 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	14	2,109,328 - 2,152,988 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	3,411,143 - 3,454,799 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	2,108,678 - 2,148,055 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	3,247,640 - 3,288,017 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	3,248,080 - 3,288,017 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	14	3,251,076 - 3,291,453 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	14	2,790,182 - 2,829,512 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	14	2,250,008 - 2,289,344 (-)	NCBI		Celera
Cytogenetic Map	14	p22	NCBI

C1orf146
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	92,217,915 - 92,245,813 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	92,217,915 - 92,245,813 (+)	Ensembl			hg38	GRCh38
GRCh37	1	92,683,472 - 92,711,370 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	92,456,161 - 92,483,955 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	1	90,929,995 - 90,957,788 (+)	NCBI		Celera
Cytogenetic Map	1	p22.1	NCBI
HuRef	1	90,803,785 - 90,831,573 (+)	NCBI		HuRef
CHM1_1	1	92,798,338 - 92,826,125 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	92,062,827 - 92,090,715 (+)	NCBI		T2T-CHM13v2.0

1700028K03Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	107,682,586 - 107,699,415 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	107,682,575 - 107,699,408 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm39 Ensembl	5	107,655,487 - 107,728,462 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	107,534,720 - 107,551,549 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	107,507,621 - 107,580,596 (+)	Ensembl			mm10	GRCm38
GRCm38.p6 Ensembl	5	107,534,709 - 107,551,542 (+)	Ensembl			mm10	GRCm38
MGSCv37	5	107,963,730 - 107,980,561 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	107,775,013 - 107,788,679 (+)	NCBI		MGSCv36	mm8
Celera	5	104,648,002 - 104,664,837 (+)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	52.23	NCBI

CUNH1orf146
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955423	2,233,543 - 2,258,941 (-)	Ensembl
ChiLan1.0	NW_004955423	2,233,445 - 2,251,205 (-)	NCBI	ChiLan1.0	ChiLan1.0

C1H1orf146
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	134,778,217 - 134,832,556 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	133,931,195 - 133,984,147 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	94,876,468 - 94,907,783 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	93,618,905 - 93,646,763 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	93,618,905 - 93,646,763 (+)	Ensembl			panPan2	panpan1.1

C6H1orf146
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	56,665,170 - 56,723,591 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	56,679,039 - 56,723,652 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	59,364,321 - 59,429,209 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	57,042,929 - 57,101,410 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	57,056,957 - 57,076,663 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	56,722,620 - 56,781,046 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	56,701,082 - 56,759,509 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	57,161,694 - 57,220,137 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

CUNH1orf146
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	102,099,320 - 102,119,874 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936537	6,828,102 - 6,848,695 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936537	6,828,179 - 6,848,653 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C4H1orf146
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	124,812,631 - 124,833,375 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	124,813,337 - 124,843,305 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

C20H1orf146
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	41,007,096 - 41,030,494 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	41,007,231 - 41,016,109 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666033	76,981,537 - 76,991,641 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

CUNH1orf146
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624742	5,478,361 - 5,530,606 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

C11H1orf146
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	11	17,303,368 - 17,316,009 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in C14h1orf146
28 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	13
Count of miRNA genes:	13
Interacting mature miRNAs:	13
Transcripts:	ENSRNOT00000002824
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7411573	Bw139	Body weight QTL 139	4.7	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	14	1	40068101	Rat
9589814	Gluco67	Glucose level QTL 67	4.54	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	14	1	40068101	Rat
634352	Apr6	Acute phase response QTL 6	3.7		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	14	1	41415516	Rat
71115	Niddm15	Non-insulin dependent diabetes mellitus QTL 15	4.8		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	14	1	11334906	Rat
71117	Niddm17	Non-insulin dependent diabetes mellitus QTL 17	2.35		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	14	1	17877928	Rat
70204	Niddm20	Non-insulin dependent diabetes mellitus QTL 20	5.1	0.000008	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	1	31893212	Rat

Markers in Region

RH138122

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	14	2,238,466 - 2,238,623 (+)	MAPPER	mRatBN7.2
Rnor_6.0	14	3,255,703 - 3,255,859	NCBI	Rnor6.0
Rnor_5.0	14	3,259,139 - 3,259,295	UniSTS	Rnor5.0
RGSC_v3.4	14	2,797,198 - 2,797,354	UniSTS	RGSC3.4
Celera	14	2,257,024 - 2,257,180	UniSTS
RH 3.4 Map	14	37.2	UniSTS
Cytogenetic Map	14	p22	UniSTS

RH140566

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	14	2,266,833 - 2,267,032 (+)	MAPPER	mRatBN7.2
Rnor_6.0	14	3,284,069 - 3,284,267	NCBI	Rnor6.0
Rnor_5.0	14	3,287,505 - 3,287,703	UniSTS	Rnor5.0
RGSC_v3.4	14	2,825,564 - 2,825,762	UniSTS	RGSC3.4
Celera	14	2,285,396 - 2,285,594	UniSTS
RH 3.4 Map	14	40.3	UniSTS
Cytogenetic Map	14	p22	UniSTS

AU048436

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	14	2,252,775 - 2,252,875 (+)	MAPPER	mRatBN7.2
Rnor_6.0	14	3,270,011 - 3,270,110	NCBI	Rnor6.0
Rnor_5.0	14	3,273,447 - 3,273,546	UniSTS	Rnor5.0
RGSC_v3.4	14	2,811,506 - 2,811,605	UniSTS	RGSC3.4
Celera	14	2,271,338 - 2,271,437	UniSTS
Cytogenetic Map	14	p22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
9	10	23	98	59	58	27	37	27	6	148	82	78	22	61	31	10	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001109563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039092477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC106605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000002824 ⟹ ENSRNOP00000002824

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	14	3,248,080 - 3,262,696 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000080452 ⟹ ENSRNOP00000074211

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	14	2,231,451 - 2,270,782 (-)	Ensembl
Rnor_6.0 Ensembl	14	3,248,687 - 3,288,017 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000156313 ⟹ ENSRNOP00000106554

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	2,374,948 - 2,386,112 (-)	Ensembl

RefSeq Acc Id:

NM_001109563 ⟹ NP_001103033

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,376,358 - 2,395,326 (-)	NCBI
mRatBN7.2	14	2,231,451 - 2,250,420 (-)	NCBI
Rnor_6.0	14	3,248,687 - 3,288,017 (-)	NCBI
Rnor_5.0	14	3,251,076 - 3,291,453 (-)	NCBI
RGSC_v3.4	14	2,790,182 - 2,829,512 (-)	RGD
Celera	14	2,250,008 - 2,289,344 (-)	RGD

Sequence:

show sequence

GATCGCAAGGAGAGTCGCCACACTCAGTAAAATCTTCCATATCTTCAAGGCAGTCTGATGAAAG
CGTAACAAGGTTGAGGCACGGAACGGACAAACAGATGCCTAAGAGAAAAGTTGTCAAGCAAGGA
CACGCAACTTTGCAGAAGGTTAATGCAAAGCCAACACCTAAAAACCCAAGTCAGTCCACGAAAG
GTGGAACCATGACCAGTAAAGACTCAAAACAAAAAGTGCTTCCTGGACAAGTTACGCTGCAAAG
TCAGGCTTCTCAACGGCCTTCCAACCCCGAAGCAGCCACCACACAGAGAAGCGTGCTTCATGGT
GTGAATGACAACAGGAGCCAGGTCTTTAAACAGAGGCCTCCTGAGTCCCTGGTTAACCTTGCTA
GTGACACCAATGGTCCTGAAGCATCCCCGTCACCCTGCAGACCTCAACCACAAAGTCCGTTAGG
CAATCAGGAGAAAACGAGACAGGAGCGAGAACACCAAGATGGGTCAACCCTGGGTGATTCAGTA
AAACATGAGCTGAGGTCAGAACTGACCAGTATAGAGCAAAGCCACACACCCGCTTACAAGGTCT
CAAGTCAGTGCAGTGCAAACCCAAACTGTGGGTGCATCGCTTCTCTGAAACCCGTGACTTCAAA
TCCAAGTGAAAACTGGATCAACTCCAACACAGCAAATACAGACCAAGTCTGTGTATCAGACAGA
GAGAGACAAACGGGGAGAAAAGGCACAGATCGTGAACCAAGTGTGAACTGTGTGGCCAGGAAAG
CAGCTTTACCGAGTGTTCCTGCAGGGATGAGTGGTACCCTAAAGTCTGCTCAGGACGACAGAAA
ACTCCCATTTCACAGAGAAGAACTCTCAGCTCAAGGCCACTTACCTCATGACTGTGCCACAGAG
GACAGTAAATGTGCTACACCCACCTCAGCTGTTTCCTCCAGATGTCTCTTGGGACAACCATCTG
AAAAAGGTTATAAAAATATGGAAGCATCAGGAACCTCAGAGAGCCATGAAGCTCCGGAAGCTCC
ATTCATGGGTCCCTGGGATTTGAACACCAGTGCCACACATCAGAGAGAGAGTCCAGAATCCGAC
ACTGGCAGCGCTACCACATCCTCAGACGACATAAAGCCCCGCTCCGAAGACTATGACGCTGGGG
GGTCTCAGGATGACGAGGGCTCCCATGACAGAGGCGTCTCCAAGTGCAGCACGGCGCTGTGCCA
TGACTTCCTTGGGAGAAGCAGCAGCGACACCAGCACCCCTGAGGAGTTGAAGGTGCATGAAGGT
GACCTCAGAACCGAAGTCAGAGTGAGAAAGCCGGGTGGGGGAGACCTCCCGCTCCACTCGGCAA
GTGATGATGAGACCCCTAGGAAGAAGCCAGATCCCTGGTCTCGATCTACGATAGTCCACCCCAG
GGAGAAGGGAAGTGCTCCACGGGGCAGTGTCCCATCTGCTCAGGAAGTAGACCAGGTTTCTTCT
TCAGCAGATGAGACAGAAGATGAAAGATCTGAAGCAGAAAACGTTAGGGAACACTCCTCTCCGT
CCAACTCAGGTACTCAGCACGTTCAGGGGATAATTAACTTAGCTTTTGAAGATGGAACTGAACA
TGAAAGTCGTGAGTTTTCTGCGACTAAGAAGTTTAGAAGGTCAGTGTTGCTCTCGGTAGATGAG
TGTGAAGAAGTGGGGTCTGACGAAGGCGAAGGCCATACCCCCCTCCAGCCCTCCCTAGATTCTC
TTTCACCTTCTGATGTTTTTGATGGTGTTTCCTATGAGCATCATGGAAGGACAGGCTACTCCAG
GTTTTTCAAAGAAAATGAAGCGACTACTGCAGAGCACAAATACAGTAGAGGCAACGATGGGCAT
AAAAATGAAGGTTTTCTCCTGAGCCCTAGGAGCAGAGACTTCCCAAGACAAGGTAAGCAGTGTG
TCTCAACAGGTGAGAAGACCAGGTTAGATGTCCCGCCCAAAGCGAGCCAACAGCCTTTTCCAGA
AAGTAAAGACATGACTAGTAAACGTGAGGTGGCTCACGGCTTGCAGCAGCACGGCACGCTCACG
GACGGGGACACCAGATCTCAAGAACGGCCATGTCATTTGGAACTCCACCAGAGAGAACCCAGCT
CCACCATACCAAAGATCAGCTCAGCGAGATCTCTCGACTCCTGTCCCAGCCAGGTGCTGCCTCA
GGACGGTCAAGTGACAGCCACCCACCCCACACCTCCCAAGAGAGCTAATAATGCTGTGTTTTCA
GATTGCAGCATCCTTAGAAGCTGGGCTTATCCATCGGCATGTCAATGGATGGGCGTGGTGGGAA
AGAAAGAGCAAAATGGACAACCACCATTATTATCAGCTCATCTCTTAAGAGTAATGAAATTGCA
ACTGCCCTAGAAAGTCGAAGCCACAAGGTTCGGTATTCTGACACGTTGGAAAGTGGATCAATTG
TATTCTCTCTCTCCGGAGTTGCGTTTCTGTTGATGGATGCCAAGGCGTGCATGACATCAGCTGA
GGAAGTATTTCTAACCAAAATCGAGAAGTTTATTAACATTCACCAAAATAGTTTTTTGGTTCTA
TTTGCCCCACTCCATGGACCTGAAGAAAGGAATCTCATGTTCAGGATTCATCAGAGATCCCTGG
GCAGTAATTTACGAATACTTCCAGTACACAACACAGTAAATGCTGTTGATCTTATGTGCACTGT
AGCGAAGACTACCTCCAAACCACACATAGACAGCATCTGCTACAGAATGATAACAACTAAAGCT
TACATCATAGAGCAAAGCCCTGTTTGGAGAACACTTCAAAAGATAGAACTGAGTACTGACTCAG
TGAGTCCAGATTCACAGTAGTGAGCATGTGTTCCTCTGCAGGAATAGCAAACTAATTAACTTAT
CAACTTGTAATGTCCAAATGTAGACTTAAGGGTGTTTATATTTAAAAGAGTATGTATACAGTTA
AGTATTATTTTATTTGGAG

hide sequence

RefSeq Acc Id:

XM_006250572 ⟹ XP_006250634

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,327 (-)	NCBI
mRatBN7.2	14	2,230,404 - 2,250,419 (-)	NCBI
Rnor_6.0	14	3,247,640 - 3,267,690 (-)	NCBI
Rnor_5.0	14	3,251,076 - 3,291,453 (-)	NCBI

Sequence:

show sequence

TTCTGTTCTAAGTCCTTCCACGCGCGGCTGGTTTCCGGGTCCTCAATTTCACGCGAAGTTCTTC
CTTTCTGTGTCCTGAGGGAATCTTTACCAGAAACAGCACTGGGCCCCCGCTGGAAGTCCCGCCT
CCTGTTTCCTGCCTCGGCTCATTGGCCGTAGACTTTTTTATTGACAGATAACAATATCCACTGA
ACAACTAAGAACCAACCACCCCACCTCTTGGGAATGGGGCGTCACTCTTAAAACTGCTTCCTAA
CGATTTGGGGAGCCATCCGGTCTCTTCATGCTGAGAAGGTTCAGGGTTTAACTCAAGTCCTGAC
TGGAACAGTCTGTGATACTGGATGAACTGGGATCGTCTGGGGCCAGCGGCTTTCTTTGAAGCTG
TCCTGGAAGCAAGTTTTGATGAAACAGCTACTAAGGCAGTCTGAGGTTAGCTCAAGAAGGATGC
TGGAACAATATCCCCGAGGGTGGATCGTGTCAGGGCTGCACTGACTTCATCGGCGTCTGTAAAC
CTAACTCTCACAGCCAAAGAACCTCCCGCATCAACCTTCACAGCTGACAGCTGCTGGGTCTGCG
GCTGCGCAAAAGCCAAGACCCAGCATGCACCGCGGCGAAGGCGTCGCTCAGGAAGCTCAGTCCA
CAGGGAGCTGCGTAGTGCAGCGGGGACCTGGCCGATTGCAGCATCCTTAGAAGCTGGGCTTATC
CATCGGCATGTCAATGGATGGGCGTGGTGGGAAAGAAAGAGCAAAATGGACAACCACCATTATT
ATCAGCTCATCTCTTAAGAGTAATGAAATTGCAACTGCCCTAGAAAGTCGAAGCCACAAGGTTC
GGTATTCTGACACGTTGGAAAGTGGATCAATTGTATTCTCTCTCTCCGGAGTTGCGTTTCTGTT
GATGGATGCCAAGGCGTGCATGACATCAGCTGAGGAAGTATTTCTAACCAAAATCGAGAAGTTT
ATTAACATTCACCAAAATAGTTTTTTGGTTCTATTTGCCCCACTCCATGGACCTGAAGAAAGGA
ATCTCATGTTCAGGATTCATCAGAGATCCCTGGGCAGTAATTTACGAATACTTCCAGTACACAA
CACAGTAAATGCTGTTGATCTTATGTGCACTGTAGCGAAGACTACCTCCAAACCACACATAGAC
AGCATCTGCTACAGAATGATAACAACTAAAGCTTACATCATAGAGCAAAGCCCTGTTTGGAGAA
CACTTCAAAAGATAGAACTGAGTACTGACTCAGTACTGGGGAGTCCCCCAAAACTGCTTCCAAG
TCAGGAAGAGGGGGAACGTTACAAACCACCAACCATTTTGAAGTAGTTACATTTCCACAGTGCT
GCGCTGTTCAGCCTGAGAGCAGGCACTCTAGAGCATTAAAGAGCACCCAACAAGCACACAGCCG
ATCTGTTTTTTCTTTTTATAAATTTATAAGTATGTGGATGAATAAAGCATTTGAATCTTCTAAA
GTAGTACTTTAAAAAATGTGTATGAGCTTTTGTTTTGTTTTTTGAGACAGGACTTTTTCTGTTT
GTTTTTGTGGTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTAATGTGTAACAAGCCTGGC
TGTCCTTAATTTCACCTTGTAGATCAGGTTGACCTCGAACTCTCTGCCTTTCTGTCCCACATGG
CTACCTGGTGTCATGGAGGCCAGAAGAGGGTGTCACCTCCTCTGCATCTCAGTAACAGCTGTGC
CCTCCATGTGGGTGCTGAGAACTGGACCCAGGTCCTCTGCAAGAGCAGGAAGTGCTGCTCTTCA
CCACCGAGCCATCTCCTCAGGCTTCTGAAAGCAAAGGCTGTTTACTGCTGATGTGCATCAGAAG
CTGACGGCCAAAACAATGCTGTCTTGTTAAAAAGAATTATGCAATTTTTCTTGTAGTAAAATTT
CTGCAACTATTTTATGGCAGTATAAACTATAATGAAAAATGGCA

hide sequence

RefSeq Acc Id:

XM_006250573 ⟹ XP_006250635

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,331 (-)	NCBI
mRatBN7.2	14	2,230,404 - 2,250,420 (-)	NCBI
Rnor_6.0	14	3,247,640 - 3,267,692 (-)	NCBI
Rnor_5.0	14	3,251,076 - 3,291,453 (-)	NCBI

Sequence:

show sequence

TATTCTGTTCTAAGTCCTTCCACGCGCGGCTGGTTTCCGGGTCCTCAATTTCACGCGAAGTTCT
TCCTTTCTGTGTCCTGAGGGAATCTTTACCAGAAACAGCACTGGGCCCCCGCTGGAAGTCCCGC
CTCCTGTTTCCTGCCTCGGCTCATTGGCCGTAGACTTTTTTATTGACAGATAACAATATCCACT
GAACAACTAAGAACCAACCACCCCACCTCTTGGGAATGGGGCGTCACTCTTAAAACTGCTTCCT
AACGATTTGGGGAGCCATCCGGTCTCTTCATGCTGAGAAGGTTCAGGGTTTAACTCAAGTCCTG
ACTGGAACAGTCTGTGATACTGGATGAACTGGGATCGTCTGGGGCCAGCGGCTTTCTTTGAAGC
TGTCCTGGAAGCAAGTTTTGATGAAACAGCTACTAAGGCAGTCTGAGGTTAGCTCAAGAAGGAT
GCTGGAACAATATCCCCGAGGGTGGATCGTGTCAGGGCTGCACTGACTTCATCGGCGTCTGTAA
ACCTAACTCTCACAGCCAAAGAACCTCCCGCATCAACCTTCACAGCTGACAGCTGCTGGGTCTG
CGGCTGCGCAAAAGCCAAGACCCAGCATGCACCGCGGCGAAGGCGTCGCTCAGGAAGCTCAGTC
CACAGGGAGCTGCGTAGTGCAGCGGGGACCTGGCCGGTAGATTGCAGCATCCTTAGAAGCTGGG
CTTATCCATCGGCATGTCAATGGATGGGCGTGGTGGGAAAGAAAGAGCAAAATGGACAACCACC
ATTATTATCAGCTCATCTCTTAAGAGTAATGAAATTGCAACTGCCCTAGAAAGTCGAAGCCACA
AGGTTCGGTATTCTGACACGTTGGAAAGTGGATCAATTGTATTCTCTCTCTCCGGAGTTGCGTT
TCTGTTGATGGATGCCAAGGCGTGCATGACATCAGCTGAGGAAGTATTTCTAACCAAAATCGAG
AAGTTTATTAACATTCACCAAAATAGTTTTTTGGTTCTATTTGCCCCACTCCATGGACCTGAAG
AAAGGAATCTCATGTTCAGGATTCATCAGAGATCCCTGGGCAGTAATTTACGAATACTTCCAGT
ACACAACACAGTAAATGCTGTTGATCTTATGTGCACTGTAGCGAAGACTACCTCCAAACCACAC
ATAGACAGCATCTGCTACAGAATGATAACAACTAAAGCTTACATCATAGAGCAAAGCCCTGTTT
GGAGAACACTTCAAAAGATAGAACTGAGTACTGACTCAGTACTGGGGAGTCCCCCAAAACTGCT
TCCAAGTCAGGAAGAGGGGGAACGTTACAAACCACCAACCATTTTGAAGTAGTTACATTTCCAC
AGTGCTGCGCTGTTCAGCCTGAGAGCAGGCACTCTAGAGCATTAAAGAGCACCCAACAAGCACA
CAGCCGATCTGTTTTTTCTTTTTATAAATTTATAAGTATGTGGATGAATAAAGCATTTGAATCT
TCTAAAGTAGTACTTTAAAAAATGTGTATGAGCTTTTGTTTTGTTTTTTGAGACAGGACTTTTT
CTGTTTGTTTTTGTGGTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTAATGTGTAACAAG
CCTGGCTGTCCTTAATTTCACCTTGTAGATCAGGTTGACCTCGAACTCTCTGCCTTTCTGTCCC
ACATGGCTACCTGGTGTCATGGAGGCCAGAAGAGGGTGTCACCTCCTCTGCATCTCAGTAACAG
CTGTGCCCTCCATGTGGGTGCTGAGAACTGGACCCAGGTCCTCTGCAAGAGCAGGAAGTGCTGC
TCTTCACCACCGAGCCATCTCCTCAGGCTTCTGAAAGCAAAGGCTGTTTACTGCTGATGTGCAT
CAGAAGCTGACGGCCAAAACAATGCTGTCTTGTTAAAAAGAATTATGCAATTTTTCTTGTAGTA
AAATTTCTGCAACTATTTTATGGCAGTATAAACTATAATGAAAAATGGCA

hide sequence

RefSeq Acc Id:

XM_006250574 ⟹ XP_006250636

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,327 (-)	NCBI
mRatBN7.2	14	2,230,404 - 2,250,419 (-)	NCBI
Rnor_6.0	14	3,247,640 - 3,267,690 (-)	NCBI
Rnor_5.0	14	3,251,076 - 3,291,453 (-)	NCBI

Sequence:

show sequence

TTCTGTTCTAAGTCCTTCCACGCGCGGCTGGTTTCCGGGTCCTCAATTTCACGCGAAGTTCTTC
CTTTCTGTGTCCTGAGGGAATCTTTACCAGAAACAGCACTGGGCCCCCGCTGGAAGTCCCGCCT
CCTGTTTCCTGCCTCGGCTCATTGGCCGTAGACTTTTTTATTGACAGATAACAATATCCACTGA
ACAACTAAGAACCAACCACCCCACCTCTTGGGAATGGGGCGTCACTCTTAAAACTGCTTCCTAA
CGATTTGGGGAGCCATCCGGTCTCTTCATGCTGAGAAGGTTCAGGGTTTAACTCAAGTCCTGAC
TGGAACAGTCTGTGATACTGGATGAACTGGGATCGTCTGGGGCCAGCGGCTTTCTTTGAAGCTG
TCCTGGAAGCAAGTTTTGATGAAACAGCTACTAAGGCAGTCTGAGCCAAAGAACCTCCCGCATC
AACCTTCACAGCTGACAGCTGCTGGGTCTGCGGCTGCGCAAAAGCCAAGACCCAGCATGCACCG
CGGCGAAGGCGTCGCTCAGGAAGCTCAGTCCACAGGGAGCTGCGTAGTGCAGCGGGGACCTGGC
CGATTGCAGCATCCTTAGAAGCTGGGCTTATCCATCGGCATGTCAATGGATGGGCGTGGTGGGA
AAGAAAGAGCAAAATGGACAACCACCATTATTATCAGCTCATCTCTTAAGAGTAATGAAATTGC
AACTGCCCTAGAAAGTCGAAGCCACAAGGTTCGGTATTCTGACACGTTGGAAAGTGGATCAATT
GTATTCTCTCTCTCCGGAGTTGCGTTTCTGTTGATGGATGCCAAGGCGTGCATGACATCAGCTG
AGGAAGTATTTCTAACCAAAATCGAGAAGTTTATTAACATTCACCAAAATAGTTTTTTGGTTCT
ATTTGCCCCACTCCATGGACCTGAAGAAAGGAATCTCATGTTCAGGATTCATCAGAGATCCCTG
GGCAGTAATTTACGAATACTTCCAGTACACAACACAGTAAATGCTGTTGATCTTATGTGCACTG
TAGCGAAGACTACCTCCAAACCACACATAGACAGCATCTGCTACAGAATGATAACAACTAAAGC
TTACATCATAGAGCAAAGCCCTGTTTGGAGAACACTTCAAAAGATAGAACTGAGTACTGACTCA
GTACTGGGGAGTCCCCCAAAACTGCTTCCAAGTCAGGAAGAGGGGGAACGTTACAAACCACCAA
CCATTTTGAAGTAGTTACATTTCCACAGTGCTGCGCTGTTCAGCCTGAGAGCAGGCACTCTAGA
GCATTAAAGAGCACCCAACAAGCACACAGCCGATCTGTTTTTTCTTTTTATAAATTTATAAGTA
TGTGGATGAATAAAGCATTTGAATCTTCTAAAGTAGTACTTTAAAAAATGTGTATGAGCTTTTG
TTTTGTTTTTTGAGACAGGACTTTTTCTGTTTGTTTTTGTGGTTTTTTTTGTTTTGTTTTGTTT
TGTTTTGTTTTGTAATGTGTAACAAGCCTGGCTGTCCTTAATTTCACCTTGTAGATCAGGTTGA
CCTCGAACTCTCTGCCTTTCTGTCCCACATGGCTACCTGGTGTCATGGAGGCCAGAAGAGGGTG
TCACCTCCTCTGCATCTCAGTAACAGCTGTGCCCTCCATGTGGGTGCTGAGAACTGGACCCAGG
TCCTCTGCAAGAGCAGGAAGTGCTGCTCTTCACCACCGAGCCATCTCCTCAGGCTTCTGAAAGC
AAAGGCTGTTTACTGCTGATGTGCATCAGAAGCTGACGGCCAAAACAATGCTGTCTTGTTAAAA
AGAATTATGCAATTTTTCTTGTAGTAAAATTTCTGCAACTATTTTATGGCAGTATAAACTATAA
TGAAAAATGGCA

hide sequence

RefSeq Acc Id:

XM_006250575 ⟹ XP_006250637

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,329 (-)	NCBI
mRatBN7.2	14	2,230,404 - 2,250,420 (-)	NCBI
Rnor_6.0	14	3,247,640 - 3,267,691 (-)	NCBI
Rnor_5.0	14	3,251,076 - 3,291,453 (-)	NCBI

Sequence:

show sequence

ATTCTGTTCTAAGTCCTTCCACGCGCGGCTGGTTTCCGGGTCCTCAATTTCACGCGAAGTTCTT
CCTTTCTGTGTCCTGAGGGAATCTTTACCAGAAACAGCACTGGGCCCCCGCTGGAAGTCCCGCC
TCCTGTTTCCTGCCTCGGCTCATTGGCCGTAGACTTTTTTATTGACAGATAACAATATCCACTG
AACAACTAAGAACCAACCACCCCACCTCTTGGGAATGGGGCGTCACTCTTAAAACTGCTTCCTA
ACGATTTGGGGAGCCATCCGGTCTCTTCATGCTGAGAAGGTTCAGGGTTTAACTCAAGTCCTGA
CTGGAACAGTCTGTGATACTGGATGAACTGGGATCGTCTGGGGCCAGCGGCTTTCTTTGAAGCT
GTCCTGGAAGCAAGTTTTGATGAAACAGCTACTAAGGCAGTCTGAGGTTAGCTCAAGAAGGATG
CTGGAACAATATCCCCGAGGGTGGATCGTGTCAGGGCTGCACTGACTTCATCGGCGTCTGTAAA
CCTAACTCTCACAGATTGCAGCATCCTTAGAAGCTGGGCTTATCCATCGGCATGTCAATGGATG
GGCGTGGTGGGAAAGAAAGAGCAAAATGGACAACCACCATTATTATCAGCTCATCTCTTAAGAG
TAATGAAATTGCAACTGCCCTAGAAAGTCGAAGCCACAAGGTTCGGTATTCTGACACGTTGGAA
AGTGGATCAATTGTATTCTCTCTCTCCGGAGTTGCGTTTCTGTTGATGGATGCCAAGGCGTGCA
TGACATCAGCTGAGGAAGTATTTCTAACCAAAATCGAGAAGTTTATTAACATTCACCAAAATAG
TTTTTTGGTTCTATTTGCCCCACTCCATGGACCTGAAGAAAGGAATCTCATGTTCAGGATTCAT
CAGAGATCCCTGGGCAGTAATTTACGAATACTTCCAGTACACAACACAGTAAATGCTGTTGATC
TTATGTGCACTGTAGCGAAGACTACCTCCAAACCACACATAGACAGCATCTGCTACAGAATGAT
AACAACTAAAGCTTACATCATAGAGCAAAGCCCTGTTTGGAGAACACTTCAAAAGATAGAACTG
AGTACTGACTCAGTACTGGGGAGTCCCCCAAAACTGCTTCCAAGTCAGGAAGAGGGGGAACGTT
ACAAACCACCAACCATTTTGAAGTAGTTACATTTCCACAGTGCTGCGCTGTTCAGCCTGAGAGC
AGGCACTCTAGAGCATTAAAGAGCACCCAACAAGCACACAGCCGATCTGTTTTTTCTTTTTATA
AATTTATAAGTATGTGGATGAATAAAGCATTTGAATCTTCTAAAGTAGTACTTTAAAAAATGTG
TATGAGCTTTTGTTTTGTTTTTTGAGACAGGACTTTTTCTGTTTGTTTTTGTGGTTTTTTTTGT
TTTGTTTTGTTTTGTTTTGTTTTGTAATGTGTAACAAGCCTGGCTGTCCTTAATTTCACCTTGT
AGATCAGGTTGACCTCGAACTCTCTGCCTTTCTGTCCCACATGGCTACCTGGTGTCATGGAGGC
CAGAAGAGGGTGTCACCTCCTCTGCATCTCAGTAACAGCTGTGCCCTCCATGTGGGTGCTGAGA
ACTGGACCCAGGTCCTCTGCAAGAGCAGGAAGTGCTGCTCTTCACCACCGAGCCATCTCCTCAG
GCTTCTGAAAGCAAAGGCTGTTTACTGCTGATGTGCATCAGAAGCTGACGGCCAAAACAATGCT
GTCTTGTTAAAAAGAATTATGCAATTTTTCTTGTAGTAAAATTTCTGCAACTATTTTATGGCAG
TATAAACTATAATGAAAAATGGCA

hide sequence

RefSeq Acc Id:

XM_006250576 ⟹ XP_006250638

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,328 (-)	NCBI
mRatBN7.2	14	2,230,404 - 2,250,419 (-)	NCBI
Rnor_6.0	14	3,247,640 - 3,267,691 (-)	NCBI
Rnor_5.0	14	3,251,076 - 3,291,453 (-)	NCBI

Sequence:

show sequence

ATTCTGTTCTAAGTCCTTCCACGCGCGGCTGGTTTCCGGGTCCTCAATTTCACGCGAAGTTCTT
CCTTTCTGTGTCCTGAGGGAATCTTTACCAGAAACAGCACTGGGCCCCCGCTGGAAGTCCCGCC
TCCTGTTTCCTGCCTCGGCTCATTGGCCGTAGACTTTTTTATTGACAGATAACAATATCCACTG
AACAACTAAGAACCAACCACCCCACCTCTTGGGAATGGGGCGTCACTCTTAAAACTGCTTCCTA
ACGATTTGGGGAGCCATCCGGTCTCTTCATGCTGAGAAGGTTCAGGGTTTAACTCAAGTCCTGA
CTGGAACAGTCTGTGATACTGGATGAACTGGGATCGTCTGGGGCCAGCGGCTTTCTTTGAAGCT
GTCCTGGAAGCAAGTTTTGATGAAACAGCTACTAAGGCAGTCTGAGATTGCAGCATCCTTAGAA
GCTGGGCTTATCCATCGGCATGTCAATGGATGGGCGTGGTGGGAAAGAAAGAGCAAAATGGACA
ACCACCATTATTATCAGCTCATCTCTTAAGAGTAATGAAATTGCAACTGCCCTAGAAAGTCGAA
GCCACAAGGTTCGGTATTCTGACACGTTGGAAAGTGGATCAATTGTATTCTCTCTCTCCGGAGT
TGCGTTTCTGTTGATGGATGCCAAGGCGTGCATGACATCAGCTGAGGAAGTATTTCTAACCAAA
ATCGAGAAGTTTATTAACATTCACCAAAATAGTTTTTTGGTTCTATTTGCCCCACTCCATGGAC
CTGAAGAAAGGAATCTCATGTTCAGGATTCATCAGAGATCCCTGGGCAGTAATTTACGAATACT
TCCAGTACACAACACAGTAAATGCTGTTGATCTTATGTGCACTGTAGCGAAGACTACCTCCAAA
CCACACATAGACAGCATCTGCTACAGAATGATAACAACTAAAGCTTACATCATAGAGCAAAGCC
CTGTTTGGAGAACACTTCAAAAGATAGAACTGAGTACTGACTCAGTACTGGGGAGTCCCCCAAA
ACTGCTTCCAAGTCAGGAAGAGGGGGAACGTTACAAACCACCAACCATTTTGAAGTAGTTACAT
TTCCACAGTGCTGCGCTGTTCAGCCTGAGAGCAGGCACTCTAGAGCATTAAAGAGCACCCAACA
AGCACACAGCCGATCTGTTTTTTCTTTTTATAAATTTATAAGTATGTGGATGAATAAAGCATTT
GAATCTTCTAAAGTAGTACTTTAAAAAATGTGTATGAGCTTTTGTTTTGTTTTTTGAGACAGGA
CTTTTTCTGTTTGTTTTTGTGGTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTAATGTGT
AACAAGCCTGGCTGTCCTTAATTTCACCTTGTAGATCAGGTTGACCTCGAACTCTCTGCCTTTC
TGTCCCACATGGCTACCTGGTGTCATGGAGGCCAGAAGAGGGTGTCACCTCCTCTGCATCTCAG
TAACAGCTGTGCCCTCCATGTGGGTGCTGAGAACTGGACCCAGGTCCTCTGCAAGAGCAGGAAG
TGCTGCTCTTCACCACCGAGCCATCTCCTCAGGCTTCTGAAAGCAAAGGCTGTTTACTGCTGAT
GTGCATCAGAAGCTGACGGCCAAAACAATGCTGTCTTGTTAAAAAGAATTATGCAATTTTTCTT
GTAGTAAAATTTCTGCAACTATTTTATGGCAGTATAAACTATAATGAAAAATGGCA

hide sequence

RefSeq Acc Id:

XM_006250581 ⟹ XP_006250643

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,329 (-)	NCBI
mRatBN7.2	14	2,230,404 - 2,250,419 (-)	NCBI
Rnor_6.0	14	3,247,640 - 3,267,709 (-)	NCBI
Rnor_5.0	14	3,251,076 - 3,291,453 (-)	NCBI

Sequence:

show sequence

AACTTAATTGTCCCATTTATTCTGTTCTAAGTCCTTCCACGCGCGGCTGGTTTCCGGGTCCTCA
ATTTCACGCGAAGTTCTTCCTTTCTGTGTCCTGAGGGAATCTTTACCAGAAACAGCACTGGGCC
CCCGCTGGAAGTCCCGCCTCCTGTTTCCTGCCTCGGCTCATTGGCCGTAGACTTTTTTATTGAC
AGATAACAATATCCACTGAACAACTAAGAACCAACCACCCCACCTCTTGGGAATGGGGCGTCAC
TCTTAAAACTGCTTCCTAACGATTTGGGGAGCCATCCGGTCTCTTCATGCTGAGAAGGTTCAGG
GTTTAACTCAAGTCCTGACTGGAACAGTCTGTGATACTGGATGAACTGGGATCGTCTGGGGCCA
GCGGCTTTCTTTGAAGCTGTCCTGGAAGCAAGTTTTGATGAAACAGCTACTAAGGCAGTCTGAG
GTTAGCTCAAGAAGGATGCTGGAACAATATCCCCGAGGGTGGATCGTGTCAGGGCTGCACTGAC
TTCATCGGCGTCTGTAAACCTAACTCTCACAGCCAAAGAACCTCCCGCATCAACCTTCACAGCT
GACAGCTGCTGGGTCTGCGGCTGCGCAAAAGCCAAGACCCAGCATGCACCGCGGCGAAGGCGTC
GCTCAGGAAGCTCAGTCCACAGGGAGCTGCGTAGTGCAGCGGGGACCTGGCCGATTGCAGCATC
CTTAGAAGCTGGGCTTATCCATCGGCATGTCAATGGATGGGCGTGGTGGGAAAGAAAGAGCAAA
ATGGACAACCACCATTATTATCAGCTCATCTCTTAAGAGTAATGAAATTGCAACTGCCCTAGAA
AGTCGAAGCCACAAGGTTCGGTATTCTGACACGTTGGAAAGTGGATCAATTGTATTCTCTCTCT
CCGGAGTTGCGTTTCTGTTGATGGATGCCAAGGCGTGCATGACATCAGCTGAGGAAGTATTTCT
AACCAAAATCGAGAAGTTTATTAACATTCACCAAAATAGTTTTTTGGTTCTATTTGCCCCACTC
CATGGACCTGAAGAAAGGAATCTCATGTTCAGGATTCATCAGAGATCCCTGGGCAGTAATTTAC
GAATACTTCCAGTACACAACACAGTAAATGCTGTTGATCTTATGTGCACTGTAGCGAAGGTACT
GGGGAGTCCCCCAAAACTGCTTCCAAGTCAGGAAGAGGGGGAACGTTACAAACCACCAACCATT
TTGAAGTAGTTACATTTCCACAGTGCTGCGCTGTTCAGCCTGAGAGCAGGCACTCTAGAGCATT
AAAGAGCACCCAACAAGCACACAGCCGATCTGTTTTTTCTTTTTATAAATTTATAAGTATGTGG
ATGAATAAAGCATTTGAATCTTCTAAAGTAGTACTTTAAAAAATGTGTATGAGCTTTTGTTTTG
TTTTTTGAGACAGGACTTTTTCTGTTTGTTTTTGTGGTTTTTTTTGTTTTGTTTTGTTTTGTTT
TGTTTTGTAATGTGTAACAAGCCTGGCTGTCCTTAATTTCACCTTGTAGATCAGGTTGACCTCG
AACTCTCTGCCTTTCTGTCCCACATGGCTACCTGGTGTCATGGAGGCCAGAAGAGGGTGTCACC
TCCTCTGCATCTCAGTAACAGCTGTGCCCTCCATGTGGGTGCTGAGAACTGGACCCAGGTCCTC
TGCAAGAGCAGGAAGTGCTGCTCTTCACCACCGAGCCATCTCCTCAGGCTTCTGAAAGCAAAGG
CTGTTTACTGCTGATGTGCATCAGAAGCTGACGGCCAAAACAATGCTGTCTTGTTAAAAAGAAT
TATGCAATTTTTCTTGTAGTAAAATTTCTGCAACTATTTTATGGCAGTATAAACTATAATGAAA
AATGGCA

hide sequence

RefSeq Acc Id:

XM_008769942 ⟹ XP_008768164

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,331 (-)	NCBI
mRatBN7.2	14	2,230,404 - 2,250,420 (-)	NCBI
Rnor_6.0	14	3,247,640 - 3,267,692 (-)	NCBI

Sequence:

show sequence

TATTCTGTTCTAAGTCCTTCCACGCGCGGCTGGTTTCCGGGTCCTCAATTTCACGCGAAGTTCT
TCCTTTCTGTGTCCTGAGGGAATCTTTACCAGAAACAGCACTGGGCCCCCGCTGGAAGTCCCGC
CTCCTGTTTCCTGCCTCGGCTCATTGGCCGTAGACTTTTTTATTGACAGATAACAATATCCACT
GAACAACTAAGAACCAACCACCCCACCTCTTGGGAATGGGGCGTCACTCTTAAAACTGCTTCCT
AACGATTTGGGGAGCCATCCGGTCTCTTCATGCTGAGAAGGTTCAGGGTTTAACTCAAGTCCTG
ACTGGAACAGTCTGTGATACTGGATGAACTGGGATCGTCTGGGGCCAGCGGCTTTCTTTGAAGC
TGTCCTGGAAGCAAGTTTTGATGAAACAGCTACTAAGGCAGTCTGAGGTTAGCTCAAGAAGGAT
GCTGGAACAATATCCCCGAGGGTGGATCGTGTCAGGGCTGCACTGACTTCATCGGCGTCTGTAA
ACCTAACTCTCACAGCCAAAGAACCTCCCGCATCAACCTTCACAGCTGACAGCTGCTGGGTCTG
CGGCTGCGCAAAAGCCAAGACCCAGCATGCACCGCGGCGAAGGCGTCGCTCAGGAAGCTCAGTC
CACAGGGAGCTGCGTAGTGCAGCGGGGACCTGGCCGGATCACAACCTAGATAACACATTGAGTT
TAATCAAAATATTTCCATAGATTGCAGCATCCTTAGAAGCTGGGCTTATCCATCGGCATGTCAA
TGGATGGGCGTGGTGGGAAAGAAAGAGCAAAATGGACAACCACCATTATTATCAGCTCATCTCT
TAAGAGTAATGAAATTGCAACTGCCCTAGAAAGTCGAAGCCACAAGGTTCGGTATTCTGACACG
TTGGAAAGTGGATCAATTGTATTCTCTCTCTCCGGAGTTGCGTTTCTGTTGATGGATGCCAAGG
CGTGCATGACATCAGCTGAGGAAGTATTTCTAACCAAAATCGAGAAGTTTATTAACATTCACCA
AAATAGTTTTTTGGTTCTATTTGCCCCACTCCATGGACCTGAAGAAAGGAATCTCATGTTCAGG
ATTCATCAGAGATCCCTGGGCAGTAATTTACGAATACTTCCAGTACACAACACAGTAAATGCTG
TTGATCTTATGTGCACTGTAGCGAAGACTACCTCCAAACCACACATAGACAGCATCTGCTACAG
AATGATAACAACTAAAGCTTACATCATAGAGCAAAGCCCTGTTTGGAGAACACTTCAAAAGATA
GAACTGAGTACTGACTCAGTACTGGGGAGTCCCCCAAAACTGCTTCCAAGTCAGGAAGAGGGGG
AACGTTACAAACCACCAACCATTTTGAAGTAGTTACATTTCCACAGTGCTGCGCTGTTCAGCCT
GAGAGCAGGCACTCTAGAGCATTAAAGAGCACCCAACAAGCACACAGCCGATCTGTTTTTTCTT
TTTATAAATTTATAAGTATGTGGATGAATAAAGCATTTGAATCTTCTAAAGTAGTACTTTAAAA
AATGTGTATGAGCTTTTGTTTTGTTTTTTGAGACAGGACTTTTTCTGTTTGTTTTTGTGGTTTT
TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTAATGTGTAACAAGCCTGGCTGTCCTTAATTTCA
CCTTGTAGATCAGGTTGACCTCGAACTCTCTGCCTTTCTGTCCCACATGGCTACCTGGTGTCAT
GGAGGCCAGAAGAGGGTGTCACCTCCTCTGCATCTCAGTAACAGCTGTGCCCTCCATGTGGGTG
CTGAGAACTGGACCCAGGTCCTCTGCAAGAGCAGGAAGTGCTGCTCTTCACCACCGAGCCATCT
CCTCAGGCTTCTGAAAGCAAAGGCTGTTTACTGCTGATGTGCATCAGAAGCTGACGGCCAAAAC
AATGCTGTCTTGTTAAAAAGAATTATGCAATTTTTCTTGTAGTAAAATTTCTGCAACTATTTTA
TGGCAGTATAAACTATAATGAAAAATGGCA

hide sequence

RefSeq Acc Id:

XM_039092477 ⟹ XP_038948405

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,390,067 (-)	NCBI
mRatBN7.2	14	2,230,404 - 2,245,162 (-)	NCBI

RefSeq Acc Id:

XM_063273645 ⟹ XP_063129715

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,326 (-)	NCBI

RefSeq Acc Id:

XM_063273646 ⟹ XP_063129716

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,326 (-)	NCBI

RefSeq Acc Id:

XM_063273647 ⟹ XP_063129717

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,329 (-)	NCBI

RefSeq Acc Id:

XM_063273648 ⟹ XP_063129718

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	2,375,311 - 2,395,326 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001103033	(Get FASTA)	NCBI Sequence Viewer
	XP_006250634	(Get FASTA)	NCBI Sequence Viewer
	XP_006250635	(Get FASTA)	NCBI Sequence Viewer
	XP_006250636	(Get FASTA)	NCBI Sequence Viewer
	XP_006250637	(Get FASTA)	NCBI Sequence Viewer
	XP_006250638	(Get FASTA)	NCBI Sequence Viewer
	XP_006250643	(Get FASTA)	NCBI Sequence Viewer
	XP_008768164	(Get FASTA)	NCBI Sequence Viewer
	XP_038948405	(Get FASTA)	NCBI Sequence Viewer
	XP_063129715	(Get FASTA)	NCBI Sequence Viewer
	XP_063129716	(Get FASTA)	NCBI Sequence Viewer
	XP_063129717	(Get FASTA)	NCBI Sequence Viewer
	XP_063129718	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL83974	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000106554
	ENSRNOP00000106554.1

RefSeq Acc Id:	NP_001103033 ⟸ NM_001109563
- UniProtKB:	A0A0G2K7H7 (UniProtKB/TrEMBL), A6KPJ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMDGRGGKERAKWTTTIIISSSLKSNEIATALESRSHKVRYSDTLESGSIVFSLSGVAFLLMD AKACMTSAEEVFLTKIEKFINIHQNSFLVLFAPLHGPEERNLMFRIHQRSLGSNLRILPVHNTV NAVDLMCTVAKTTSKPHIDSICYRMITTKAYIIEQSPVWRTLQKIELSTDSVSPDSQ hide sequence

RefSeq Acc Id:	XP_006250635 ⟸ XM_006250573
- Peptide Label:	isoform X1
- UniProtKB:	D4A8A9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMDGRGGKERAKWTTTIIISSSLKSNEIATALESRSHKVRYSDTLESGSIVFSLSGVAFLLMD AKACMTSAEEVFLTKIEKFINIHQNSFLVLFAPLHGPEERNLMFRIHQRSLGSNLRILPVHNTV NAVDLMCTVAKTTSKPHIDSICYRMITTKAYIIEQSPVWRTLQKIELSTDSVLGSPPKLLPSQE EGERYKPPTILK hide sequence

RefSeq Acc Id:	XP_006250638 ⟸ XM_006250576
- Peptide Label:	isoform X1
- UniProtKB:	D4A8A9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMDGRGGKERAKWTTTIIISSSLKSNEIATALESRSHKVRYSDTLESGSIVFSLSGVAFLLMD AKACMTSAEEVFLTKIEKFINIHQNSFLVLFAPLHGPEERNLMFRIHQRSLGSNLRILPVHNTV NAVDLMCTVAKTTSKPHIDSICYRMITTKAYIIEQSPVWRTLQKIELSTDSVLGSPPKLLPSQE EGERYKPPTILK hide sequence

RefSeq Acc Id:	XP_006250636 ⟸ XM_006250574
- Peptide Label:	isoform X1
- UniProtKB:	D4A8A9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMDGRGGKERAKWTTTIIISSSLKSNEIATALESRSHKVRYSDTLESGSIVFSLSGVAFLLMD AKACMTSAEEVFLTKIEKFINIHQNSFLVLFAPLHGPEERNLMFRIHQRSLGSNLRILPVHNTV NAVDLMCTVAKTTSKPHIDSICYRMITTKAYIIEQSPVWRTLQKIELSTDSVLGSPPKLLPSQE EGERYKPPTILK hide sequence

RefSeq Acc Id:	XP_006250637 ⟸ XM_006250575
- Peptide Label:	isoform X1
- UniProtKB:	D4A8A9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMDGRGGKERAKWTTTIIISSSLKSNEIATALESRSHKVRYSDTLESGSIVFSLSGVAFLLMD AKACMTSAEEVFLTKIEKFINIHQNSFLVLFAPLHGPEERNLMFRIHQRSLGSNLRILPVHNTV NAVDLMCTVAKTTSKPHIDSICYRMITTKAYIIEQSPVWRTLQKIELSTDSVLGSPPKLLPSQE EGERYKPPTILK hide sequence

RefSeq Acc Id:	XP_006250634 ⟸ XM_006250572
- Peptide Label:	isoform X1
- UniProtKB:	D4A8A9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMDGRGGKERAKWTTTIIISSSLKSNEIATALESRSHKVRYSDTLESGSIVFSLSGVAFLLMD AKACMTSAEEVFLTKIEKFINIHQNSFLVLFAPLHGPEERNLMFRIHQRSLGSNLRILPVHNTV NAVDLMCTVAKTTSKPHIDSICYRMITTKAYIIEQSPVWRTLQKIELSTDSVLGSPPKLLPSQE EGERYKPPTILK hide sequence

RefSeq Acc Id:	XP_006250643 ⟸ XM_006250581
- Peptide Label:	isoform X3
- Sequence:	show sequence MSMDGRGGKERAKWTTTIIISSSLKSNEIATALESRSHKVRYSDTLESGSIVFSLSGVAFLLMD AKACMTSAEEVFLTKIEKFINIHQNSFLVLFAPLHGPEERNLMFRIHQRSLGSNLRILPVHNTV NAVDLMCTVAKVLGSPPKLLPSQEEGERYKPPTILK hide sequence

RefSeq Acc Id:	XP_008768164 ⟸ XM_008769942
- Peptide Label:	isoform X1
- UniProtKB:	D4A8A9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMDGRGGKERAKWTTTIIISSSLKSNEIATALESRSHKVRYSDTLESGSIVFSLSGVAFLLMD AKACMTSAEEVFLTKIEKFINIHQNSFLVLFAPLHGPEERNLMFRIHQRSLGSNLRILPVHNTV NAVDLMCTVAKTTSKPHIDSICYRMITTKAYIIEQSPVWRTLQKIELSTDSVLGSPPKLLPSQE EGERYKPPTILK hide sequence

Ensembl Acc Id:

ENSRNOP00000074211 ⟸ ENSRNOT00000080452

Ensembl Acc Id:

ENSRNOP00000002824 ⟸ ENSRNOT00000002824

RefSeq Acc Id:	XP_038948405 ⟸ XM_039092477
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063129717 ⟸ XM_063273647
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063129718 ⟸ XM_063273648
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063129716 ⟸ XM_063273646
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K7H7 (UniProtKB/TrEMBL), A6KPJ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063129715 ⟸ XM_063273645
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K7H7 (UniProtKB/TrEMBL), A6KPJ1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000106554 ⟸ ENSRNOT00000156313

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A8A9-F1-model_v2	AlphaFold	D4A8A9	1-204	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1586315	AgrOrtholog
BioCyc Gene	G2FUF-16624	BioCyc
Ensembl Genes	ENSRNOG00000047876	Ensembl
	ENSRNOG00000074494	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000156313	ENTREZGENE
	ENSRNOT00000156313.1	UniProtKB/TrEMBL
InterPro	DUF4580	UniProtKB/TrEMBL
KEGG Report	rno:689986	UniProtKB/TrEMBL
NCBI Gene	689986	ENTREZGENE
PANTHER	PROTEIN SPO16 HOMOLOG	UniProtKB/TrEMBL
	PTHR31408	UniProtKB/TrEMBL
Pfam	DUF4580	UniProtKB/TrEMBL
PhenoGen	C14h1orf146	PhenoGen
RatGTEx	ENSRNOG00000047876	RatGTEx
	ENSRNOG00000074494	RatGTEx
UniProt	A0A0G2K7H7	ENTREZGENE
	A0ABK0L8B3_RAT	UniProtKB/TrEMBL
	A6KPJ1	ENTREZGENE, UniProtKB/TrEMBL
	D4A8A9	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-07-13	C14h1orf146	similar to human chromosome 1 open reading frame 146	LOC689986	hypothetical protein LOC689986	Name and Symbol changed	629549	APPROVED
2008-01-09	LOC689986	hypothetical protein LOC689986	LOC682466	hypothetical protein LOC682466	Data merged from RGD:1583426	1643240	APPROVED
2006-11-19	LOC689986	hypothetical protein LOC689986			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-11-19	LOC682466	hypothetical protein LOC682466			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar