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Gene: Plxna3 (plexin A3) Rattus norvegicus

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Symbol:

Plxna3

Name:

plexin A3

RGD ID:

1584973

Description:

Predicted to enable semaphorin receptor activity. Predicted to be involved in several processes, including nervous system development; positive regulation of cytoskeleton organization; and semaphorin-plexin signaling pathway. Predicted to act upstream of or within several processes, including hippocampus development; negative regulation of axon extension involved in axon guidance; and neuron development. Predicted to be located in membrane. Predicted to be part of semaphorin receptor complex. Predicted to be active in plasma membrane. Orthologous to human PLXNA3 (plexin A3); INTERACTS WITH 1-naphthyl isothiocyanate; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

Plexin 4; Plexin 4, SEX, homolog to the cMet/HGF receptors; plexin A3 (mapped); plexin-A3; Plxn4; Plxna3_mapped; SEX

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PLXNA3 (plexin A3)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther, PhylomeDB
Mus musculus (house mouse):	Plxna3 (plexin A3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Plxna3 (plexin A3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PLXNA3 (plexin A3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PLXNA3 (plexin A3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Plxna3 (plexin A3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PLXNA3 (plexin A3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PLXNA3 (plexin A3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Plxna3 (plexin A3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Plxna3 (plexin A3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RPL10A (ribosomal protein L10a)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	PLXNA3 (plexin A3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Plxna3 (plexin A3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	plxna3 (plexin A3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	plx-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	plx-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	PlexA	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	PlexA	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	plxna3	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	157,266,986 - 157,282,896 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	157,267,107 - 157,282,891 (+)	Ensembl				GRCr8
mRatBN7.2	X	152,115,699 - 152,131,608 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	152,115,819 - 152,131,603 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	154,256,947 - 154,272,736 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	157,820,173 - 157,835,962 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	155,491,971 - 155,507,760 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	156,363,400 - 156,379,433 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	156,363,405 - 156,379,189 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	152,103,535 - 152,119,342 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	160,261,781 - 160,277,570 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	135,765,043 - 135,780,832 (-)	NCBI		Celera
Cytogenetic Map	X	q37	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Childhood Schizophrenia (ISO)

disorder of sexual development (ISO)

Dwarfism (ISO)

Endometrial Neoplasms (ISO)

hypogonadotropic hypogonadism (ISO)

Klinefelter syndrome (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1-naphthyl isothiocyanate (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,4,4'-trichlorobiphenyl (ISO)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (EXP)

calcitriol (ISO)

carbon nanotube (ISO)

choline (ISO)

cyclosporin A (ISO)

DDE (ISO)

diarsenic trioxide (ISO)

doxorubicin (ISO)

ethanol (ISO)

folic acid (ISO)

inulin (ISO)

L-methionine (ISO)

Moniliformin (ISO)

N-methyl-N'-nitro-N-nitrosoguanidine (ISO)

nickel sulfate (ISO)

nitrofen (EXP)

O-methyleugenol (ISO)

paracetamol (ISO)

PCB138 (ISO)

perfluorooctane-1-sulfonic acid (ISO)

potassium chromate (ISO)

potassium dichromate (ISO)

propanal (ISO)

quercetin (ISO)

S-butyl-DL-homocysteine (S,R)-sulfoximine (ISO)

sodium arsenite (ISO)

sulindac (ISO)

sunitinib (ISO)

temozolomide (ISO)

testosterone (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

trovafloxacin (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axon extension (IEA)

axon guidance (ISO)

branchiomotor neuron axon guidance (IEA,ISO)

central nervous system neuron development (IEA)

facial nerve structural organization (IEA,ISO)

gonadotrophin-releasing hormone neuronal migration to the hypothalamus (IEA,ISO)

hippocampus development (ISO)

motor neuron axon guidance (IBA)

negative chemotaxis (IEA,ISO)

negative regulation of axon extension involved in axon guidance (ISO)

neuron projection extension (ISO)

neuron projection guidance (ISO)

olfactory nerve formation (IEA,ISO)

positive regulation of cytoskeleton organization (IEA,ISO)

pyramidal neuron development (ISO)

regulation of axon extension involved in axon guidance (IEA)

regulation of axonogenesis (IEA)

regulation of cell migration (IBA)

regulation of chemotaxis (IEA)

semaphorin-plexin signaling pathway (IBA,IEA,ISO)

synapse assembly (IBA)

telencephalon development (IEA)

trigeminal nerve structural organization (IEA,ISO)

Cellular Component

plasma membrane (IBA,IEA)

semaphorin receptor complex (IBA)

Molecular Function

protein binding (ISO)

semaphorin receptor activity (IBA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Plexin-A3 mediates semaphorin signaling and regulates the development of hippocampal axonal projections.	Cheng HJ, etal., Neuron 2001 Oct 25;32(2):249-63.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Disposition of 14C-labelled FCE 22101 in animals.	Strolin Benedetti M, etal., J Antimicrob Chemother 1989 Mar;23 Suppl C:165-71.

Additional References at PubMed

PMID:18804103	PMID:19717441	PMID:21835343	PMID:23063687

Genomics

Comparative Map Data

Plxna3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	157,266,986 - 157,282,896 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	157,267,107 - 157,282,891 (+)	Ensembl				GRCr8
mRatBN7.2	X	152,115,699 - 152,131,608 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	152,115,819 - 152,131,603 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	154,256,947 - 154,272,736 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	157,820,173 - 157,835,962 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	155,491,971 - 155,507,760 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	156,363,400 - 156,379,433 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	156,363,405 - 156,379,189 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	152,103,535 - 152,119,342 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	160,261,781 - 160,277,570 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	135,765,043 - 135,780,832 (-)	NCBI		Celera
Cytogenetic Map	X	q37	NCBI

PLXNA3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	154,458,281 - 154,477,779 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	154,458,280 - 154,477,779 (+)	Ensembl			hg38	GRCh38
GRCh37	X	153,686,621 - 153,706,118 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	153,339,817 - 153,355,179 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	X	153,250,326 - 153,265,688	NCBI
Celera	X	153,847,674 - 153,863,036 (+)	NCBI		Celera
Cytogenetic Map	X	q28	NCBI
HuRef	X	142,263,786 - 142,279,038 (+)	NCBI		HuRef
CHM1_1	X	153,598,267 - 153,613,626 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	152,694,791 - 152,714,288 (+)	NCBI		T2T-CHM13v2.0

Plxna3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	73,372,644 - 73,388,295 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	73,372,672 - 73,388,295 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	74,328,290 - 74,344,689 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	74,329,066 - 74,344,689 (+)	Ensembl			mm10	GRCm38
MGSCv37	X	71,574,405 - 71,590,028 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	70,581,819 - 70,596,483 (+)	NCBI		MGSCv36	mm8
Celera	X	65,582,855 - 65,598,478 (+)	NCBI		Celera
Cytogenetic Map	X	A7.3	NCBI
cM Map	X	38.0	NCBI

Plxna3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955580	957,860 - 972,772 (+)	Ensembl
ChiLan1.0	NW_004955580	958,033 - 972,123 (+)	NCBI	ChiLan1.0	ChiLan1.0

PLXNA3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	154,432,646 - 154,448,014 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	154,436,251 - 154,455,295 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	143,900,029 - 143,915,391 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	153,772,700 - 153,786,167 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	153,772,700 - 153,786,167 (+)	Ensembl			panPan2	panpan1.1

PLXNA3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	122,165,460 - 122,180,727 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	122,167,144 - 122,180,951 (+)	Ensembl			canFam3	CanFam3.1
ROS_Cfam_1.0	X	125,307,120 - 125,321,660 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	125,306,775 - 125,321,599 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	121,076,136 - 121,090,670 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	123,591,257 - 123,605,728 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	123,352,967 - 123,367,509 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Plxna3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	119,471,987 - 119,488,955 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936809	1,209,743 - 1,226,728 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936809	1,209,787 - 1,226,726 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PLXNA3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	124,983,943 - 124,997,072 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	124,982,307 - 124,997,098 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	143,588,358 - 143,603,211 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PLXNA3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	128,706,354 - 128,721,971 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	128,708,424 - 128,721,971 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666065	66,695,159 - 66,710,804 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Plxna3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624946	926,521 - 939,483 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624946	924,956 - 939,483 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Plxna3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	X	128,335,484 - 128,350,770 (+)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	825
Count of miRNA genes:	296
Interacting mature miRNAs:	375
Transcripts:	ENSRNOT00000056307
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
738025	Stresp3	Stress response QTL 3	4.61	0.0066	stress-related behavior trait (VT:0010451)	defensive burying - approach	X	105359969	157758123	Rat
10059603	Bw174	Body weight QTL 174	3.4	0.025	body mass (VT:0001259)	body weight (CMO:0000012)	X	118973754	157758123	Rat

Markers in Region

RH131167

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	152,130,726 - 152,130,908 (-)	MAPPER	mRatBN7.2
Rnor_6.0	X	156,364,100 - 156,364,281	NCBI	Rnor6.0
Rnor_5.0	1	152,104,235 - 152,104,416	UniSTS	Rnor5.0
RGSC_v3.4	X	160,262,481 - 160,262,662	UniSTS	RGSC3.4
Celera	1	135,765,743 - 135,765,924	UniSTS
Cytogenetic Map	X	q37	UniSTS

REN89674

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	152,120,474 - 152,120,806 (-)	MAPPER	mRatBN7.2
Rnor_6.0	X	156,374,202 - 156,374,533	NCBI	Rnor6.0
Rnor_5.0	1	152,114,336 - 152,114,667	UniSTS	Rnor5.0
RGSC_v3.4	X	160,272,583 - 160,272,914	UniSTS	RGSC3.4
Celera	1	135,775,845 - 135,776,176	UniSTS
Cytogenetic Map	X	q37	UniSTS

REN89678

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	152,121,515 - 152,121,792 (-)	MAPPER	mRatBN7.2
Rnor_6.0	X	156,373,216 - 156,373,492	NCBI	Rnor6.0
Rnor_5.0	1	152,113,350 - 152,113,626	UniSTS	Rnor5.0
RGSC_v3.4	X	160,271,597 - 160,271,873	UniSTS	RGSC3.4
Celera	1	135,774,859 - 135,775,135	UniSTS
Cytogenetic Map	X	q37	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	162	91	90	59	84	59	6	347	184	11	141	80	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC094668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000083148 ⟹ ENSRNOP00000068735

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	157,267,107 - 157,282,891 (+)	Ensembl
mRatBN7.2 Ensembl	X	152,115,819 - 152,131,603 (+)	Ensembl
Rnor_6.0 Ensembl	X	156,363,405 - 156,379,189 (-)	Ensembl

RefSeq Acc Id:

NM_001107581 ⟹ NP_001101051

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	157,267,107 - 157,282,896 (+)	NCBI
mRatBN7.2	X	152,115,819 - 152,131,608 (+)	NCBI
Rnor_6.0	X	156,363,400 - 156,379,189 (-)	NCBI
Rnor_5.0	1	152,103,535 - 152,119,342 (-)	NCBI
RGSC_v3.4	X	160,261,781 - 160,277,570 (-)	RGD
Celera	1	135,765,043 - 135,780,832 (-)	NCBI

Sequence:

show sequence

AGTGTGTGGGCGGCGGCGGTTGCAGATTTTGCAACGTGCGGGGCGAGTTTGCGGGGCCACGCGA
GGGGGGGCGGCTGTAGGGCACGGGGGCACGTCCACGTGGCTACGGGTGGACACCCTGAGTCAGC
CGCGGTGGAGGGACAGGCCTGTCCCTCGCGTTACAGCTGCTGGTCATGCACACTGTCTGCCTTC
TCCCATTGCTATTCTTCACCATAGGAGGGTGCCTGGGTAGCAGCAGGCCGTTTCGTACCTTTGT
GGTGACAGATACCACACTGACTCACCTGGCTGTGCACCGAGTGACTGGGGAGGTGTTTGTAGGT
GCCGTGAACCGAGTTTTCAAGCTGGCTTCAAATCTAACTGAGCTACGGGCCCATGTCACAGGGC
CCATTGAGGACAATGCTCGCTGCTACCCACCCCCTAGCATGCGTGTGTGCTCCCACCGCCTGGT
GCCTGTGGACAATGTGAACAAGCTGCTCCTCATAGACTATGCAGCCCGTCGCTTGGTAGCTTGT
GGCAGCATCTGGCAGGGCATTTGCCAGTTCCTGCGTCTGGATGACCTCTTCAAGTTGGGTGAGC
CCCACCATCGCAAGGAACACTATCTGTCAGGGGCCCAGGAGCCTGATTCCATGGCTGGCGTCAT
TGTTGAACAGGGCCAGGGGCCTAGCAAGCTGTTTGTGGGCACCGCTGTTGATGGCAAGTCTGAG
TACTTTCCCACCTTGAGTTCCCGTAAGCTCATCGACGATGAGGACAGTGGAGATATGTTCAGTC
TGGTGTACCAGGATGAGTTTGTCTCTTCTCAGATCAAGATCCCTTCAGACACACTGTCCTTGTA
CCCTGCCTTTGACATCTACTACATATATGGCTTTGTCAGTGCCTCCTTCGTGTACTTCTTAACA
TTGCAGCTGGATACCCAGCAGACACTGCTGGATACAGCAGGCGAGAAATTCTTCACATCTAAGA
TTGTGCGCATGTGTGCCGGGGACTCAGAGTTCTACTCTTACGTAGAGTTCCCTATTGGCTGCTC
CTGGCGTGGTGTGGAGTACCGCTTGGTGCAGAGTGCCCATCTGGCCAAGCCAGGCCTGCTACTG
GCCCAGGCTCTGGGTGTGCCAGCCGACGAGGATGTGCTCTTCACCATCTTCTCTCAAGGCCAGA
AGAATCGAGCCAACCCACCTCGGCAGACCATCCTTTGCCTCTTCACCCTCAGCAGCATTAATGC
CCACATTCGGCGCCGAATCCAATCGTGCTACCGTGGGGAGGGCACGCTGGCCTTGCCCTGGCTG
CTGAATAAGGAGCTGCCCTGCATCAACACCCCCATGCAGATCAATGGAAACTTCTGTGGGTTAG
TGTTGAATCAACCATTGGGTGGCCTACACGTGATTGAGGGGCTACCCTTGCTGGCTGACAGCAC
TGATGGCATGGCCAGTGTGGCTGCCTACACCTACCACCAGCACTCTGTGGTTTTCATCGGTACA
CGCAGCGGTAATTTGAAGAAGGTGCGAGTTGATGGCTCTCAGGATGCCCAACTATATGAAACGG
TCTCTGTGGTGCAGGGCACCCCCATACTTCGAGACCTGCTCTTCAGCCCTGACCACCGACACAT
CTACCTCCTGAGTGAGAAGCAGGTGAGCCAACTCCCGGTGGAGACCTGTGAGCAGTATCTGAGC
TGTGCTGCATGCCTGGGCTCAGGGGACCCACACTGTGGTTGGTGTGTGCTACAGCACAGGTGCT
GCCGTGAAGGGGCCTGTCCAGGTGCCTCTGCCCCACACGGCTTTGCAGAAGAGCTGAACAAATG
TATACAAGTGCGGGTTCGGCCTAATAATGTATCAGTGACATCCTCTGGGGTGCAGCTGACAGTA
GCCATGCGCAATGTGCCAGACCTCAGTTTGGGTGTGAGCTGTTCCTTTGAGGAAGTGACTGAAA
GTGAGGCTATTCTGCTGCCCTCTGGAGAGCTACGATGCCCTTCACCATCTCTTCAGGAGCTCCA
GACACTTACCAGAGGGCATGGGGCAACTCATACTGTGCGGCTTCAGCTGCTCTCCATGGAGACT
GGTGTGAGGTTTGCTGGGGTTGACTTTGTCTTCTACAACTGCAGTGCCCTCCAGTCGTGTATGT
CCTGTGTTGGCAGCCCTTACCCCTGCCACTGGTGTAAGTACCGTCATGTGTGCACCAGCCACCC
ACACGAGTGTTCCTTCCAGGAGGGCAGGGTCCACAGCCCTGAGGGCTGCCCAGAGATCCTGCCT
CGAGGGGACCTCTTGATTCCTGTGGGTGTCATGCAGCCTCTAACTCTGCGGGCTAAGAACCTGC
CACAGCCTCAGTCAGGGCAGAAGAATTATGAATGTGTGGTCCGTGTACAGGGGCGGCAACATCG
GGTACCTGCAGTGCGCTTTAATAGCAGCAGCGTGCAGTGCCAGAATGCCTCGTACTTCTATGAA
GGTGATGAGTTTGGTGACACTGAACTGGACTTCTCTGTGGTCTGGGATGGAGATTTCCCCATTG
ATAAGCCTCCTAGCTTCCGAGCCCTTCTTTACAAGTGCTGGGCTCAGCGGCCTAGCTGTGGCCT
CTGCCTCAAGGCTGATCCCCGATTCAACTGTGGCTGGTGCATCTCGGAGCACAGGTGCCAGCTT
CGGGTTCACTGCCCAGCTCCCAAAAGTAACTGGATGCACCCAAGCCAGAAGGGGGCCCGATGCA
GCCATCCCCGAATCACCCAGATTCACCCACTAACAGGACCCAAGGAGGGGGGCACCCGGGTCAC
CATTGTGGGTGAGAACCTGGGCCTCACTTCCCGTGAGGTTGGCCTTCGAGTAGCTGGTGTACGT
TGTAACTCCATTCCCACCGAATATGTCAGTGCTGAAAGGATCGTATGTGAGATGGAGGAATCGT
TGGTGCCCAGCCCACCACCTGGGCCTGCTGAGCTCTGTGTAGGTGATTGTTCTGCTGACTTCCG
CACACAGTCCCAGCAACTCTACAGCTTTGTGACCCCAACACTTGACCGTGTAAGTCCTACTCGG
GGCCCAGCTTCTGGGGGAACTCGGCTCACCATCTCTGGAACTTCTCTGGATGCTGGTAGCAGGG
TCACAGTTATTATAAGAGATGGAGAGTGCCAGTTTGTGAGGAGAGATGCTGAGGCAATCGTGTG
TATCTCACCTATCTCCACTCTGGGCCCCAGTCAGGCCCCTATCATCCTTGCCATCGACCATGCC
AACATCTCCAGCACTGGAGTCATCTATACCTACACTCAGGACCCTACTGTCACACACCTTGAGC
CCACCTGGAGCATCATCAATGGAAGCACCTCCATCACTGTGAGTGGAACCCATCTGCTGACAGT
GCAAGAACCCCGTGTACGAGCCAAGTACCGTGGTATTGAGACCACTAATACATGCCAGGTGATC
AACGACACTGCAATGCTATGTAAGGCCCCTGGCATCTTCCTTGGGCATCCTCAGCCTCGGGCCC
AAGGCGAGCACCCTGATGAGTTTGGCTTCTTGCTGGACCACGTGCAGGCAGCCCGCTCCCTCAA
CCGTTCTTCCTTCACCTACTACCCTGATCCCAGCTTTGAACCACTTGGGCCCTCTGGTGTGCTA
GATGTCAAACCTGGTTCGCATGTTGTATTGAAGGGCAAGAACCTGATCCCTGCTGCAGCTGGCA
GCTCCCGCCTCAACTACACAGTGTTGATTGGAGGACAACCATGTGCACTAACTGTCTCAGATAC
TCAACTTCTGTGTGATTCCCCTAGCCAGACAGGCCGGCAACCTGTTATGGTGCTGGTGGGTGGC
CTGGAGTTCTGGTTGGGCACCCTGCACATCACTGCTGATCGGGCACTGACCTTACCGGCTATGG
TGGGGCTGGCAGCAGGAGGAGGGCTCTTGCTGCTGGCCATCACTGTTGTACTGGTTGCCTACAA
GCGAAAGACTCAGGATGCAGACCGCACACTTAAGCGACTTCAGCTACAGATGGACAACCTGGAG
TCTCGTGTGGCCTTGGAGTGCAAGGAAGCTTTTGCTGAGTTACAGACAGATATCAACGAACTGA
CAAACCACATGGATGGTGTGCAGATCCCCTTCTTGGACTACCGGACCTATGCTGTGCGCGTACT
TTTCCCTGGCATTGAGGCTCACCCAGTGCTCAAGGAGCTGGATACTCCCCCCAATGTGGAGAAA
GCCCTGCGCCTATTTGGACAGTTGCTGCACAGCCGTGCCTTCCTGCTCACCTTCATCCACACTT
TGGAGGCCCAGAGCAGTTTCTCCATGCGTGACCGTGGTACTGTGGCCTCACTCACCATGGTGGC
CCTGCAGAGTCGGCTTGACTATGCCACTGGGCTGCTCAAGCAACTGCTGGCTGACCTCATAGAG
AAAAACCTTGAGAGCAAGAACCACCCAAAGCTGCTATTGCGCAGGACAGAGTCAGTGGCTGAGA
AGATGCTCACCAACTGGTTCACATTCCTGCTGCATAAGTTCCTGAAGGAGTGCGCCGGGGAGCC
ACTCTTCCTGCTGTACTGCGCCATCAAGCAGCAGATGGAGAAAGGTCCCATCGATGCCATAACA
GGCGAGGCCCGCTACTCCTTAAGTGAGGACAAGCTCATCCGTCAGCAGATCGACTATAAGACCC
TGACTCTGCATTGTGTGTGCCCGGAGAGTGAGGGCAGTGCCCAGGTCCCGGTGAAGGTTCTTAA
CTGTGATAGCATCACCCAGGCCAAAGACAAGCTGTTGGATACCGTGTACAAGGGTATTCCATAC
TCTCAGCGCCCCAAAGCTGAGGACATGGACTTGGAATGGCGCCAGGGCCGTATGGCCCGAATCA
TCCTCCAAGATGAGGATATCACTACAAAGATTGAGTGTGATTGGAAGAGGATCAACTCACTGGC
TCACTACCAGGTGACTGATGGTTCCTTAGTAGCACTGGTGCCCAAACAAGTGTCTGCCTATAAC
ATGGCCAACTCATTCACCTTCACCCGTTCACTTAGTCGCTATGAGAGTTTGCTCCGTGCTGCCA
GCAGCCCAGATAGCCTCCGTTCCCGAGCACCTATGCTCACACCTGACCAGGAGGCGGGCACCAA
GCTGTGGCATCTGGTGAAGAACCACGACCATGCTGATCACCGAGAGGGAGACCGTGGCAGCAAG
ATGGTCTCAGAAATATATCTGACAAGGCTGCTGGCCACCAAGGGCACGTTGCAGAAGTTTGTGG
ATGACTTGTTTGAAACTGTGTTCAGTACAGCCCACCGGGGCTCAGCCTTACCCTTGGCCATCAA
GTACATGTTTGACTTCCTGGATGAACAGGCTGACCAGCGCCAGATCAGTGACCCTGATGTGCGC
CACACCTGGAAAAGCAACTGCTTGCCTCTGCGTTTCTGGGTGAATGTGATCAAGAACCCACAAT
TCGTGTTTGACATCCACAAGAATAGCATCACAGATGCCTGCCTCTCTGTGGTAGCCCAGACCTT
CATGGACTCCTGTTCCACATCAGAGCACCGCCTGGGCAAGGACTCACCTTCCAACAAGCTGCTC
TATGCCAAGGATATTCCCAATTACAAGAGCTGGGTGGAGAGGTACTACCGAGATATTGCAAAGA
TGGCATCCATCAGTGACCAGGACATGGACGCCTACTTAGTGGAGCAGTCCCGCCTCCATGCCAA
TGACTTCAATGTCCTAAGTGCACTCAGTGAGCTCTACTTCTATGTCACCAAGTACCGTCAGGAG
ATCCTCACCTCGCTGGACCGAGATGCCTCTTGTCGGAAGCATAAGCTTCGACAGAAGCTGGAGC
AGATCATCACCTTGGTGTCCAGCAGCAGCTGAGTGGGGAGATGGTGAGGAGGGGGCTTCTCACT
TCTGAGCCATCCTCCCAGTCGGGGGAGTGTCTGGCTCTAGCCTGGGTTTCCAGGGCTGAGACCC
AGATCTGGTGTTGTTGGGGAGGTTACCAAGCCAAGATGCCCATCGCACCTGGGCCCCCTTCATT
AGTGCCTTGCTTTGGGCCCTGCAGGGGGAGGGGATGACAGGACCAAGCTTCCCCCACCAGCAGC
AGCAATATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGACCACCTTGCTC
TGACATCCTACCCACCTATTTATTAATGTAATTCTACCTTAATTTCCATATGTAAATATATATG
CCCCATGGGATGTTACTAGCCTCACAGACCTCTTCCTTGGTTGATCTGGGTCTTGTTTCCTGTT
CTGGTTACTTTGTGATATTGCAAGCCTTGGCTCAGCCTCTGGTATCTCAGCTTTGCTGTGTCAG
GCCCCACTTGTCTAAAAAGAGATCCTCAGTACCAGCAGCATTCAGGGTTTGATGATGCATCTGA
AGCTGCCCTCAGATTGTCCAGGTCAGGCCAGGCCAATGTCCCTTTTCAGATATCTCAGAAGTCA
GACCACATTTTCATGGGGCCTGCCGTCTCTGAGAGAACTATAGCCAGGCTGTGATTGGGCCTGA
TGTGGGCCTGGGCCTCTGGGACATTCCTTGTGTCCCTACTGCCAAATTTCCTTAGTGTTGTAGG
CACTTGCCCTGAAACCTCTCAGCCTCAGCTGCCCCATCATATGCCCGTCCGTAAGGGCCAAGGT
GGCAGTGCCTTACTGTTTTGTGTCTCCTGCTTCCTCTGAGGAATCTGGCCCTGTCTGATAGTCC
CAGACCCTCAGTTCACTCTTCTTTTGTTGCATGAGTTTTTCTTTGTTGTAATTTTTTCCTAATT
AAATGTCGGGAAATGGGGTCAATGCATGTCTTTGTCTTTGGAGAAAGTGGGTAGGCCTGTTGGG
CTATGGATGAACTAGATTCCCATTATGGGAAAAAATGTAACTCGATAGGACTTGTAATGATTTG
AGGAAGGCCATGACCATGTACAATCCATTAGGCAACCCCTGTGGCTATAGCTTCAAGACTGAAT
AAATCTACTTCCTTCTTGCATCTACTGTTTCCACTCAGATATGCCCATCTCCCTGCTTCTGCCC
TGCCTATTTAGACCATTATTACTGGAGACAAAGATATATTGTTAAGAAATAAAGCACATGTCTC
CATTGTGTTAAAAAATCTTTTTTTTTTTTGGAGCTGAGGACTGAACCCAGGGCCTTGCCCTTGC
TAGGCAAGTGCTCTACCACTGAGCTAAATCCCCAACCCCTAAAAAAATCTTTAATGGGGGCTGC
AGAGATGGCTTAGAGTTTAAGAGCACCCCTTATTCTTCCACAGGACCCAGGTCAATTTCTAGCA
TCCACATAGTATCTTATAATCATTTGTGACTTCAGTTCCAGGAAATCTGATGTCCTGGCTTCCT
TAGACACCAGGCATGGACATGGCACACAGACATATATGCAAACCTATACACATAAAATAAAATG
AAACTAATTTTAAAAA

hide sequence

RefSeq Acc Id:

XM_006229577 ⟹ XP_006229639

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	157,266,986 - 157,282,452 (+)	NCBI
mRatBN7.2	X	152,115,699 - 152,131,164 (+)	NCBI
Rnor_6.0	X	156,363,400 - 156,379,334 (-)	NCBI
Rnor_5.0	1	152,103,535 - 152,119,342 (-)	NCBI

Sequence:

show sequence

GAGTCCTGGGCCACAGGGACCAGCGGCCTCCCACCCCACCACGAGCTCTGCCTTTTAGGTCTCC
GGTCCGCCCTCTCTGAGAGCCCCCTCCCGGTGTGGTGGTACGGTCCGGGTTTAAAAGGCCCAGG
CGGCCGCGGGCCAGCCCAGTGTGTGGGCGGCGGCGGTTGCAGATTTTGCAACGTGCGGGGCGAG
TTTGCGGGGCCACGCGAGGGGGGGCGGCTGTAGGGCACGGGGGCACGTCCACGTGGCTACGGGT
GGACACCCTGAGTCAGCCGCGGTGGAGGGACAGGTAGGCCTGTCCCTCGCGTTACAGCTGCTGG
TCATGCACACTGTCTGCCTTCTCCCATTGCTATTCTTCACCATAGGAGGGTGCCTGGGTAGCAG
CAGGCCGTTTCGTACCTTTGTGGTGACAGATACCACACTGACTCACCTGGCTGTGCACCGAGTG
ACTGGGGAGGTGTTTGTAGGTGCCGTGAACCGAGTTTTCAAGCTGGCTTCAAATCTAACTGAGC
TACGGGCCCATGTCACAGGGCCCATTGAGGACAATGCTCGCTGCTACCCACCCCCTAGCATGCG
TGTGTGCTCCCACCGCCTGGTGCCTGTGGACAATGTGAACAAGCTGCTCCTCATAGACTATGCA
GCCCGTCGCTTGGTAGCTTGTGGCAGCATCTGGCAGGGCATTTGCCAGTTCCTGCGTCTGGATG
ACCTCTTCAAGTTGGGTGAGCCCCACCATCGCAAGGAACACTATCTGTCAGGGGCCCAGGAGCC
TGATTCCATGGCTGGCGTCATTGTTGAACAGGGCCAGGGGCCTAGCAAGCTGTTTGTGGGCACC
GCTGTTGATGGCAAGTCTGAGTACTTTCCCACCTTGAGTTCCCGTAAGCTCATCGACGATGAGG
ACAGTGGAGATATGTTCAGTCTGGTGTACCAGGATGAGTTTGTCTCTTCTCAGATCAAGATCCC
TTCAGACACACTGTCCTTGTACCCTGCCTTTGACATCTACTACATATATGGCTTTGTCAGTGCC
TCCTTCGTGTACTTCTTAACATTGCAGCTGGATACCCAGCAGACACTGCTGGATACAGCAGGCG
AGAAATTCTTCACATCTAAGATTGTGCGCATGTGTGCCGGGGACTCAGAGTTCTACTCTTACGT
AGAGTTCCCTATTGGCTGCTCCTGGCGTGGTGTGGAGTACCGCTTGGTGCAGAGTGCCCATCTG
GCCAAGCCAGGCCTGCTACTGGCCCAGGCTCTGGGTGTGCCAGCCGACGAGGATGTGCTCTTCA
CCATCTTCTCTCAAGGCCAGAAGAATCGAGCCAACCCACCTCGGCAGACCATCCTTTGCCTCTT
CACCCTCAGCAGCATTAATGCCCACATTCGGCGCCGAATCCAATCGTGCTACCGTGGGGAGGGC
ACGCTGGCCTTGCCCTGGCTGCTGAATAAGGAGCTGCCCTGCATCAACACCCCCATGCAGATCA
ATGGAAACTTCTGTGGGTTAGTGTTGAATCAACCATTGGGTGGCCTACACGTGATTGAGGGGCT
ACCCTTGCTGGCTGACAGCACTGATGGCATGGCCAGTGTGGCTGCCTACACCTACCACCAGCAC
TCTGTGGTTTTCATCGGTACACGCAGCGGTAATTTGAAGAAGGTGCGAGTTGATGGCTCTCAGG
ATGCCCAACTATATGAAACGGTCTCTGTGGTGCAGGGCACCCCCATACTTCGAGACCTGCTCTT
CAGCCCTGACCACCGACACATCTACCTCCTGAGTGAGAAGCAGGTGAGCCAACTCCCGGTGGAG
ACCTGTGAGCAGTATCTGAGCTGTGCTGCATGCCTGGGCTCAGGGGACCCACACTGTGGTTGGT
GTGTGCTACAGCACAGGTGCTGCCGTGAAGGGGCCTGTCCAGGTGCCTCTGCCCCACACGGCTT
TGCAGAAGAGCTGAACAAATGTATACAAGTGCGGGTTCGGCCTAATAATGTATCAGTGACATCC
TCTGGGGTGCAGCTGACAGTAGCCATGCGCAATGTGCCAGACCTCAGTTTGGGTGTGAGCTGTT
CCTTTGAGGAAGTGACTGAAAGTGAGGCTATTCTGCTGCCCTCTGGAGAGCTACGATGCCCTTC
ACCATCTCTTCAGGAGCTCCAGACACTTACCAGAGGGCATGGGGCAACTCATACTGTGCGGCTT
CAGCTGCTCTCCATGGAGACTGGTGTGAGGTTTGCTGGGGTTGACTTTGTCTTCTACAACTGCA
GTGCCCTCCAGTCGTGTATGTCCTGTGTTGGCAGCCCTTACCCCTGCCACTGGTGTAAGTACCG
TCATGTGTGCACCAGCCACCCACACGAGTGTTCCTTCCAGGAGGGCAGGGTCCACAGCCCTGAG
GGCTGCCCAGAGATCCTGCCTCGAGGGGACCTCTTGATTCCTGTGGGTGTCATGCAGCCTCTAA
CTCTGCGGGCTAAGAACCTGCCACAGCCTCAGTCAGGGCAGAAGAATTATGAATGTGTGGTCCG
TGTACAGGGGCGGCAACATCGGGTACCTGCAGTGCGCTTTAATAGCAGCAGCGTGCAGTGCCAG
AATGCCTCGTACTTCTATGAAGGTGATGAGTTTGGTGACACTGAACTGGACTTCTCTGTGGTCT
GGGATGGAGATTTCCCCATTGATAAGCCTCCTAGCTTCCGAGCCCTTCTTTACAAGTGCTGGGC
TCAGCGGCCTAGCTGTGGCCTCTGCCTCAAGGCTGATCCCCGATTCAACTGTGGCTGGTGCATC
TCGGAGCACAGGTGCCAGCTTCGGGTTCACTGCCCAGCTCCCAAAAGTAACTGGATGCACCCAA
GCCAGAAGGGGGCCCGATGCAGCCATCCCCGAATCACCCAGATTCACCCACTAACAGGACCCAA
GGAGGGGGGCACCCGGGTCACCATTGTGGGTGAGAACCTGGGCCTCACTTCCCGTGAGGTTGGC
CTTCGAGTAGCTGGTGTACGTTGTAACTCCATTCCCACCGAATATGTCAGTGCTGAAAGGATCG
TATGTGAGATGGAGGAATCGTTGGTGCCCAGCCCACCACCTGGGCCTGCTGAGCTCTGTGTAGG
TGATTGTTCTGCTGACTTCCGCACACAGTCCCAGCAACTCTACAGCTTTGTGACCCCAACACTT
GACCGTGTAAGTCCTACTCGGGGCCCAGCTTCTGGGGGAACTCGGCTCACCATCTCTGGAACTT
CTCTGGATGCTGGTAGCAGGGTCACAGTTATTATAAGAGATGGAGAGTGCCAGTTTGTGAGGAG
AGATGCTGAGGCAATCGTGTGTATCTCACCTATCTCCACTCTGGGCCCCAGTCAGGCCCCTATC
ATCCTTGCCATCGACCATGCCAACATCTCCAGCACTGGAGTCATCTATACCTACACTCAGGACC
CTACTGTCACACACCTTGAGCCCACCTGGAGCATCATCAATGGAAGCACCTCCATCACTGTGAG
TGGAACCCATCTGCTGACAGTGCAAGAACCCCGTGTACGAGCCAAGTACCGTGGTATTGAGACC
ACTAATACATGCCAGGTGATCAACGACACTGCAATGCTATGTAAGGCCCCTGGCATCTTCCTTG
GGCATCCTCAGCCTCGGGCCCAAGGCGAGCACCCTGATGAGTTTGGCTTCTTGCTGGACCACGT
GCAGGCAGCCCGCTCCCTCAACCGTTCTTCCTTCACCTACTACCCTGATCCCAGCTTTGAACCA
CTTGGGCCCTCTGGTGTGCTAGATGTCAAACCTGGTTCGCATGTTGTATTGAAGGGCAAGAACC
TGATCCCTGCTGCAGCTGGCAGCTCCCGCCTCAACTACACAGTGTTGATTGGAGGACAACCATG
TGCACTAACTGTCTCAGATACTCAACTTCTGTGTGATTCCCCTAGCCAGACAGGCCGGCAACCT
GTTATGGTGCTGGTGGGTGGCCTGGAGTTCTGGTTGGGCACCCTGCACATCACTGCTGATCGGG
CACTGACCTTACCGGCTATGGTGGGGCTGGCAGCAGGAGGAGGGCTCTTGCTGCTGGCCATCAC
TGTTGTACTGGTTGCCTACAAGCGAAAGACTCAGGATGCAGACCGCACACTTAAGCGACTTCAG
CTACAGATGGACAACCTGGAGTCTCGTGTGGCCTTGGAGTGCAAGGAAGCTTTTGCTGAGTTAC
AGACAGATATCAACGAACTGACAAACCACATGGATGGTGTGCAGATCCCCTTCTTGGACTACCG
GACCTATGCTGTGCGCGTACTTTTCCCTGGCATTGAGGCTCACCCAGTGCTCAAGGAGCTGGAT
ACTCCCCCCAATGTGGAGAAAGCCCTGCGCCTATTTGGACAGTTGCTGCACAGCCGTGCCTTCC
TGCTCACCTTCATCCACACTTTGGAGGCCCAGAGCAGTTTCTCCATGCGTGACCGTGGTACTGT
GGCCTCACTCACCATGGTGGCCCTGCAGAGTCGGCTTGACTATGCCACTGGGCTGCTCAAGCAA
CTGCTGGCTGACCTCATAGAGAAAAACCTTGAGAGCAAGAACCACCCAAAGCTGCTATTGCGCA
GGACAGAGTCAGTGGCTGAGAAGATGCTCACCAACTGGTTCACATTCCTGCTGCATAAGTTCCT
GAAGGAGTGCGCCGGGGAGCCACTCTTCCTGCTGTACTGCGCCATCAAGCAGCAGATGGAGAAA
GGTCCCATCGATGCCATAACAGGCGAGGCCCGCTACTCCTTAAGTGAGGACAAGCTCATCCGTC
AGCAGATCGACTATAAGACCCTGACTCTGCATTGTGTGTGCCCGGAGAGTGAGGGCAGTGCCCA
GGTCCCGGTGAAGGTTCTTAACTGTGATAGCATCACCCAGGCCAAAGACAAGCTGTTGGATACC
GTGTACAAGGGTATTCCATACTCTCAGCGCCCCAAAGCTGAGGACATGGACTTGGAATGGCGCC
AGGGCCGTATGGCCCGAATCATCCTCCAAGATGAGGATATCACTACAAAGATTGAGTGTGATTG
GAAGAGGATCAACTCACTGGCTCACTACCAGGTGACTGATGGTTCCTTAGTAGCACTGGTGCCC
AAACAAGTGTCTGCCTATAACATGGCCAACTCATTCACCTTCACCCGTTCACTTAGTCGCTATG
AGAGTTTGCTCCGTGCTGCCAGCAGCCCAGATAGCCTCCGTTCCCGAGCACCTATGCTCACACC
TGACCAGGAGGCGGGCACCAAGCTGTGGCATCTGGTGAAGAACCACGACCATGCTGATCACCGA
GAGGGAGACCGTGGCAGCAAGATGGTCTCAGAAATATATCTGACAAGGCTGCTGGCCACCAAGG
GCACGTTGCAGAAGTTTGTGGATGACTTGTTTGAAACTGTGTTCAGTACAGCCCACCGGGGCTC
AGCCTTACCCTTGGCCATCAAGTACATGTTTGACTTCCTGGATGAACAGGCTGACCAGCGCCAG
ATCAGTGACCCTGATGTGCGCCACACCTGGAAAAGCAACTGCTTGCCTCTGCGTTTCTGGGTGA
ATGTGATCAAGAACCCACAATTCGTGTTTGACATCCACAAGAATAGCATCACAGATGCCTGCCT
CTCTGTGGTAGCCCAGACCTTCATGGACTCCTGTTCCACATCAGAGCACCGCCTGGGCAAGGAC
TCACCTTCCAACAAGCTGCTCTATGCCAAGGATATTCCCAATTACAAGAGCTGGGTGGAGAGGT
ACTACCGAGATATTGCAAAGATGGCATCCATCAGTGACCAGGACATGGACGCCTACTTAGTGGA
GCAGTCCCGCCTCCATGCCAATGACTTCAATGTCCTAAGTGCACTCAGTGAGCTCTACTTCTAT
GTCACCAAGTACCGTCAGGAGATCCTCACCTCGCTGGACCGAGATGCCTCTTGTCGGAAGCATA
AGCTTCGACAGAAGCTGGAGCAGATCATCACCTTGGTGTCCAGCAGCAGCTGAGTGGGGAGATG
GTGAGGAGGGGGCTTCTCACTTCTGAGCCATCCTCCCAGTCGGGGGAGTGTCTGGCTCTAGCCT
GGGTTTCCAGGGCTGAGACCCAGATCTGGTGTTGTTGGGGAGGTTACCAAGCCAAGATGCCCAT
CGCACCTGGGCCCCCTTCATTAGTGCCTTGCTTTGGGCCCTGCAGGGGGAGGGGATGACAGGAC
CAAGCTTCCCCCACCAGCAGCAGCAATATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAA
GAGCCCTTGACCACCTTGCTCTGACATCCTACCCACCTATTTATTAATGTAATTCTACCTTAAT
TTCCATATGTAAATATATATGCCCCATGGGATGTTACTAGCCTCACAGACCTCTTCCTTGGTTG
ATCTGGGTCTTGTTTCCTGTTCTGGTTACTTTGTGATATTGCAAGCCTTGGCTCAGCCTCTGGT
ATCTCAGCTTTGCTGTGTCAGGCCCCACTTGTCTAAAAAGAGATCCTCAGTACCAGCAGCATTC
AGGGTTTGATGATGCATCTGAAGCTGCCCTCAGATTGTCCAGGTCAGGCCAGGCCAATGTCCCT
TTTCAGATATCTCAGAAGTCAGACCACATTTTCATGGGGCCTGCCGTCTCTGAGAGAACTATAG
CCAGGCTGTGATTGGGCCTGATGTGGGCCTGGGCCTCTGGGACATTCCTTGTGTCCCTACTGCC
AAATTTCCTTAGTGTTGTAGGCACTTGCCCTGAAACCTCTCAGCCTCAGCTGCCCCATCATATG
CCCGTCCGTAAGGGCCAAGGTGGCAGTGCCTTACTGTTTTGTGTCTCCTGCTTCCTCTGAGGAA
TCTGGCCCTGTCTGATAGTCCCAGACCCTCAGTTCACTCTTCTTTTGTTGCATGAGTTTTTCTT
TGTTGTAATTTTTTCCTAATTAAATGTCGGGAAATGGGGTCAATGCATGTCTTTGTCTTTGGAG
AAAGTGGGTAGGCCTGTTGGGCTATGGATGAACTAGATTCCCATTATGGGAAAAAATGTAACTC
GATAGGACTTGTAATGATTTGAGGAAGGCCATGACCATGTACAATCCATTAGGCAACCCCTGTG
GCTATAGCTTCAAGACTGAATAAATCTACTTCCTTCTTGCATCTACTGTTTCCACTCAGATATG
CCCATCTCCCTGCTTCTGCCCTGCCTATTTAGACCATTATTACTGGAGACAAAGATATATTGTT
AAGAAATAAAGCACATGTCTCCATTGTGTTAAAAAATCTTTTTTTTTTTTGGAGCTGAGGACTG
AACCCAGGGCCTTGCCCTTGCTAGGCAAGTGCTCTACCACTGAGCTAAATCCCCAACCCCTAAA
AAAATCTTTAATGGGGGCTGCAGAGATGGCTTAGAGTTTAAGAGCACCCCTTATTCTTCCACAG
GACCCAGGTCAATTTCTAGCATCCACATAGTATCTTATAATCATTTGTGACTTCAGTTCCAGGA
AATCTGATGTCCTGGCTTCCTTAGACACCAGGCATGGACATGGCACACAGACATATATGCAAAC
CTATACACATAAAATAAAATGAAACTAATTTTAAAAA

hide sequence

RefSeq Acc Id:

XM_039099684 ⟹ XP_038955612

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	157,266,986 - 157,282,452 (+)	NCBI
mRatBN7.2	X	152,115,699 - 152,131,164 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101051	(Get FASTA)	NCBI Sequence Viewer
	XP_006229639	(Get FASTA)	NCBI Sequence Viewer
	XP_038955612	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	D3ZPX4	(Get FASTA)	NCBI Sequence Viewer
	EDL84972	(Get FASTA)	NCBI Sequence Viewer
	EDL84973	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000068735
	ENSRNOP00000068735.1

RefSeq Acc Id:	NP_001101051 ⟸ NM_001107581
- Peptide Label:	precursor
- UniProtKB:	D3ZPX4 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MHTVCLLPLLFFTIGGCLGSSRPFRTFVVTDTTLTHLAVHRVTGEVFVGAVNRVFKLASNLTEL RAHVTGPIEDNARCYPPPSMRVCSHRLVPVDNVNKLLLIDYAARRLVACGSIWQGICQFLRLDD LFKLGEPHHRKEHYLSGAQEPDSMAGVIVEQGQGPSKLFVGTAVDGKSEYFPTLSSRKLIDDED SGDMFSLVYQDEFVSSQIKIPSDTLSLYPAFDIYYIYGFVSASFVYFLTLQLDTQQTLLDTAGE KFFTSKIVRMCAGDSEFYSYVEFPIGCSWRGVEYRLVQSAHLAKPGLLLAQALGVPADEDVLFT IFSQGQKNRANPPRQTILCLFTLSSINAHIRRRIQSCYRGEGTLALPWLLNKELPCINTPMQIN GNFCGLVLNQPLGGLHVIEGLPLLADSTDGMASVAAYTYHQHSVVFIGTRSGNLKKVRVDGSQD AQLYETVSVVQGTPILRDLLFSPDHRHIYLLSEKQVSQLPVETCEQYLSCAACLGSGDPHCGWC VLQHRCCREGACPGASAPHGFAEELNKCIQVRVRPNNVSVTSSGVQLTVAMRNVPDLSLGVSCS FEEVTESEAILLPSGELRCPSPSLQELQTLTRGHGATHTVRLQLLSMETGVRFAGVDFVFYNCS ALQSCMSCVGSPYPCHWCKYRHVCTSHPHECSFQEGRVHSPEGCPEILPRGDLLIPVGVMQPLT LRAKNLPQPQSGQKNYECVVRVQGRQHRVPAVRFNSSSVQCQNASYFYEGDEFGDTELDFSVVW DGDFPIDKPPSFRALLYKCWAQRPSCGLCLKADPRFNCGWCISEHRCQLRVHCPAPKSNWMHPS QKGARCSHPRITQIHPLTGPKEGGTRVTIVGENLGLTSREVGLRVAGVRCNSIPTEYVSAERIV CEMEESLVPSPPPGPAELCVGDCSADFRTQSQQLYSFVTPTLDRVSPTRGPASGGTRLTISGTS LDAGSRVTVIIRDGECQFVRRDAEAIVCISPISTLGPSQAPIILAIDHANISSTGVIYTYTQDP TVTHLEPTWSIINGSTSITVSGTHLLTVQEPRVRAKYRGIETTNTCQVINDTAMLCKAPGIFLG HPQPRAQGEHPDEFGFLLDHVQAARSLNRSSFTYYPDPSFEPLGPSGVLDVKPGSHVVLKGKNL IPAAAGSSRLNYTVLIGGQPCALTVSDTQLLCDSPSQTGRQPVMVLVGGLEFWLGTLHITADRA LTLPAMVGLAAGGGLLLLAITVVLVAYKRKTQDADRTLKRLQLQMDNLESRVALECKEAFAELQ TDINELTNHMDGVQIPFLDYRTYAVRVLFPGIEAHPVLKELDTPPNVEKALRLFGQLLHSRAFL LTFIHTLEAQSSFSMRDRGTVASLTMVALQSRLDYATGLLKQLLADLIEKNLESKNHPKLLLRR TESVAEKMLTNWFTFLLHKFLKECAGEPLFLLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQ QIDYKTLTLHCVCPESEGSAQVPVKVLNCDSITQAKDKLLDTVYKGIPYSQRPKAEDMDLEWRQ GRMARIILQDEDITTKIECDWKRINSLAHYQVTDGSLVALVPKQVSAYNMANSFTFTRSLSRYE SLLRAASSPDSLRSRAPMLTPDQEAGTKLWHLVKNHDHADHREGDRGSKMVSEIYLTRLLATKG TLQKFVDDLFETVFSTAHRGSALPLAIKYMFDFLDEQADQRQISDPDVRHTWKSNCLPLRFWVN VIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPNYKSWVERY YRDIAKMASISDQDMDAYLVEQSRLHANDFNVLSALSELYFYVTKYRQEILTSLDRDASCRKHK LRQKLEQIITLVSSSS hide sequence

RefSeq Acc Id:	XP_006229639 ⟸ XM_006229577
- Peptide Label:	isoform X1
- UniProtKB:	D3ZPX4 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MHTVCLLPLLFFTIGGCLGSSRPFRTFVVTDTTLTHLAVHRVTGEVFVGAVNRVFKLASNLTEL RAHVTGPIEDNARCYPPPSMRVCSHRLVPVDNVNKLLLIDYAARRLVACGSIWQGICQFLRLDD LFKLGEPHHRKEHYLSGAQEPDSMAGVIVEQGQGPSKLFVGTAVDGKSEYFPTLSSRKLIDDED SGDMFSLVYQDEFVSSQIKIPSDTLSLYPAFDIYYIYGFVSASFVYFLTLQLDTQQTLLDTAGE KFFTSKIVRMCAGDSEFYSYVEFPIGCSWRGVEYRLVQSAHLAKPGLLLAQALGVPADEDVLFT IFSQGQKNRANPPRQTILCLFTLSSINAHIRRRIQSCYRGEGTLALPWLLNKELPCINTPMQIN GNFCGLVLNQPLGGLHVIEGLPLLADSTDGMASVAAYTYHQHSVVFIGTRSGNLKKVRVDGSQD AQLYETVSVVQGTPILRDLLFSPDHRHIYLLSEKQVSQLPVETCEQYLSCAACLGSGDPHCGWC VLQHRCCREGACPGASAPHGFAEELNKCIQVRVRPNNVSVTSSGVQLTVAMRNVPDLSLGVSCS FEEVTESEAILLPSGELRCPSPSLQELQTLTRGHGATHTVRLQLLSMETGVRFAGVDFVFYNCS ALQSCMSCVGSPYPCHWCKYRHVCTSHPHECSFQEGRVHSPEGCPEILPRGDLLIPVGVMQPLT LRAKNLPQPQSGQKNYECVVRVQGRQHRVPAVRFNSSSVQCQNASYFYEGDEFGDTELDFSVVW DGDFPIDKPPSFRALLYKCWAQRPSCGLCLKADPRFNCGWCISEHRCQLRVHCPAPKSNWMHPS QKGARCSHPRITQIHPLTGPKEGGTRVTIVGENLGLTSREVGLRVAGVRCNSIPTEYVSAERIV CEMEESLVPSPPPGPAELCVGDCSADFRTQSQQLYSFVTPTLDRVSPTRGPASGGTRLTISGTS LDAGSRVTVIIRDGECQFVRRDAEAIVCISPISTLGPSQAPIILAIDHANISSTGVIYTYTQDP TVTHLEPTWSIINGSTSITVSGTHLLTVQEPRVRAKYRGIETTNTCQVINDTAMLCKAPGIFLG HPQPRAQGEHPDEFGFLLDHVQAARSLNRSSFTYYPDPSFEPLGPSGVLDVKPGSHVVLKGKNL IPAAAGSSRLNYTVLIGGQPCALTVSDTQLLCDSPSQTGRQPVMVLVGGLEFWLGTLHITADRA LTLPAMVGLAAGGGLLLLAITVVLVAYKRKTQDADRTLKRLQLQMDNLESRVALECKEAFAELQ TDINELTNHMDGVQIPFLDYRTYAVRVLFPGIEAHPVLKELDTPPNVEKALRLFGQLLHSRAFL LTFIHTLEAQSSFSMRDRGTVASLTMVALQSRLDYATGLLKQLLADLIEKNLESKNHPKLLLRR TESVAEKMLTNWFTFLLHKFLKECAGEPLFLLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQ QIDYKTLTLHCVCPESEGSAQVPVKVLNCDSITQAKDKLLDTVYKGIPYSQRPKAEDMDLEWRQ GRMARIILQDEDITTKIECDWKRINSLAHYQVTDGSLVALVPKQVSAYNMANSFTFTRSLSRYE SLLRAASSPDSLRSRAPMLTPDQEAGTKLWHLVKNHDHADHREGDRGSKMVSEIYLTRLLATKG TLQKFVDDLFETVFSTAHRGSALPLAIKYMFDFLDEQADQRQISDPDVRHTWKSNCLPLRFWVN VIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPNYKSWVERY YRDIAKMASISDQDMDAYLVEQSRLHANDFNVLSALSELYFYVTKYRQEILTSLDRDASCRKHK LRQKLEQIITLVSSSS hide sequence

Ensembl Acc Id:

ENSRNOP00000068735 ⟸ ENSRNOT00000083148

RefSeq Acc Id:	XP_038955612 ⟸ XM_039099684
- Peptide Label:	isoform X2

Protein Domains

IPT/TIG Plexin cytoplasmic RasGAP Sema

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZPX4-F1-model_v2	AlphaFold	D3ZPX4	1-1872	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13702042

Promoter ID:

EPDNEW_R12566

Type:

single initiation site

Name:

Plxna3_1

Description:

plexin A3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	X	156,379,189 - 156,379,249	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1584973	AgrOrtholog
BioCyc Gene	G2FUF-624	BioCyc
Ensembl Genes	ENSRNOG00000060464	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000083148	ENTREZGENE
	ENSRNOT00000083148.2	UniProtKB/Swiss-Prot
Gene3D-CATH	2.130.10.10	UniProtKB/Swiss-Prot
	2.60.40.10	UniProtKB/Swiss-Prot
	GTPase Activation - p120gap, domain 1	UniProtKB/Swiss-Prot
InterPro	Ig-like_fold	UniProtKB/Swiss-Prot
	Ig_E-set	UniProtKB/Swiss-Prot
	IPT_dom	UniProtKB/Swiss-Prot
	Plexin	UniProtKB/Swiss-Prot
	Plexin_cytoplasmic_RasGAP_dom	UniProtKB/Swiss-Prot
	Plexin_RBD	UniProtKB/Swiss-Prot
	Plexin_repeat	UniProtKB/Swiss-Prot
	PSI	UniProtKB/Swiss-Prot
	Rho_GTPase_activation_prot	UniProtKB/Swiss-Prot
	Semap_dom	UniProtKB/Swiss-Prot
	Semap_dom_sf	UniProtKB/Swiss-Prot
	TIG1_plexin	UniProtKB/Swiss-Prot
	TIG2_plexin	UniProtKB/Swiss-Prot
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:309280	UniProtKB/Swiss-Prot
NCBI Gene	309280	ENTREZGENE
PANTHER	PLEXIN-A3	UniProtKB/Swiss-Prot
	PTHR22625	UniProtKB/Swiss-Prot
Pfam	Plexin_cytopl	UniProtKB/Swiss-Prot
	Plexin_RBD	UniProtKB/Swiss-Prot
	PSI	UniProtKB/Swiss-Prot
	PSI_PlexinA-B	UniProtKB/Swiss-Prot
	Sema	UniProtKB/Swiss-Prot
	TIG	UniProtKB/Swiss-Prot
	TIG_2	UniProtKB/Swiss-Prot
	TIG_plexin	UniProtKB/Swiss-Prot
PhenoGen	Plxna3	PhenoGen
PROSITE	SEMA	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000060464	RatGTEx
SMART	IPT	UniProtKB/Swiss-Prot
	PSI	UniProtKB/Swiss-Prot
	Sema	UniProtKB/Swiss-Prot
Superfamily-SCOP	Plexin repeat	UniProtKB/Swiss-Prot
	SSF101912	UniProtKB/Swiss-Prot
	SSF48350	UniProtKB/Swiss-Prot
	SSF81296	UniProtKB/Swiss-Prot
UniProt	A6KRQ7_RAT	UniProtKB/TrEMBL
	D3ZPX4	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2007-04-13		plexin A3	Plxna3	plexin A3 (mapped)	Name updated	737654	APPROVED
2007-04-11	Plxna3	plexin A3 (mapped)	Plxna3_mapped	plexin A3 (mapped)	Data merged from RGD:3357	737654	APPROVED
2006-11-19	Plxna3	plexin A3 (mapped)			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-11-17	Plxna3_mapped	plexin A3 (mapped)	Plxna3	plexin A3	Symbol and Name updated	1556543	APPROVED
2003-04-09	Plxna3	plexin A3	Plxn4	Plexin 4	Symbol and Name updated	629477	APPROVED
2002-06-10	Plxn4	Plexin 4			Symbol and Name status set to approved	70586	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_homology	mouse homolog Plexin-A3 receptor is activated by and mediates semaphorin signalling to trigger stereotyped pruning of specific hippocampal mossy fiber and pyramidal axon branches	1303935
gene_homology	mouse homolog Plexin-A3 receptor is activated by and mediates semaphorin signalling to trigger stereotyped pruning of specific hippocampal mossy fiber and pyramidal axon branches	1303936

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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