Med27 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 3 | 33,027,240 - 33,201,240 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 3 | 33,027,525 - 33,201,240 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 3 | 12,629,593 - 12,803,340 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 12,629,603 - 12,803,339 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 3 | 15,704,009 - 15,877,484 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 24,288,986 - 24,462,461 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 22,541,283 - 22,714,772 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 7,884,793 - 8,059,003 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 7,884,822 - 8,059,003 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 13,233,444 - 13,407,329 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 3 | 8,309,117 - 8,483,255 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 3 | 7,408,892 - 7,582,612 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | p12 | NCBI | | | | |
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MED27 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 9 | 131,860,112 - 132,079,867 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 131,852,928 - 132,079,875 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 9 | 134,735,499 - 134,955,254 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 133,725,320 - 133,945,074 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 131,765,052 - 131,984,807 | NCBI | | | | | Celera | 9 | 105,275,611 - 105,497,127 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | q34.13 | NCBI | | | | | HuRef | 9 | 104,352,429 - 104,449,321 (-) | NCBI | | HuRef | | | HuRef | 9 | 104,229,766 - 104,309,124 (-) | NCBI | | HuRef | | | CHM1_1 | 9 | 134,885,065 - 135,104,872 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 144,073,412 - 144,293,910 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Med27 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 2 | 29,236,822 - 29,414,802 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 29,236,831 - 29,414,805 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 2 | 29,346,810 - 29,524,790 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 29,346,819 - 29,524,793 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 2 | 29,202,356 - 29,380,308 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 29,168,845 - 29,346,797 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 29,052,694 - 29,230,799 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | B | NCBI | | | | | cM Map | 2 | 19.84 | NCBI | | | | |
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MED27 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 11 | 7,277,375 - 7,494,875 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 7,279,717 - 7,497,217 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 102,982,174 - 103,199,512 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 131,619,441 - 131,835,951 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 131,619,441 - 131,835,951 (-) | Ensembl | | | panPan2 | panpan1.1 |
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MED27 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 9 | 52,136,652 - 52,331,676 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 52,136,698 - 52,328,998 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 51,400,849 - 51,598,323 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 53,029,231 - 53,233,104 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 53,029,259 - 53,232,690 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 9 | 51,809,073 - 52,006,556 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 52,134,101 - 52,331,473 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 52,219,819 - 52,423,730 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Med27 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024404947 | 198,755,451 - 198,943,054 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936487 | 18,523,010 - 18,711,618 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936487 | 18,523,979 - 18,711,584 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MED27 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 1 | 271,724,910 - 271,928,367 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 271,724,910 - 271,928,367 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 305,733,695 - 305,937,230 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MED27 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 12 | 6,062,604 - 6,281,039 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 6,062,569 - 6,281,050 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666079 | 9,293,875 - 9,512,647 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Med27 (Heterocephalus glaber - naked mole-rat) |
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Med27 (Rattus rattus - black rat) |
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