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Gene: Vwa5b2 (von Willebrand factor A domain containing 5B2) Rattus norvegicus

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Symbol:

Vwa5b2

Name:

von Willebrand factor A domain containing 5B2

RGD ID:

1564491

Description:

Orthologous to human VWA5B2 (von Willebrand factor A domain containing 5B2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical LOC303812; LOC303812; RGD1564491; von Willebrand factor A domain-containing protein 5B2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	93,810,456 - 93,827,609 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	11	93,810,739 - 93,826,205 (-)	Ensembl				GRCr8
mRatBN7.2	11	80,306,067 - 80,323,220 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	80,306,350 - 80,323,220 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	11	89,028,997 - 89,045,850 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	81,682,416 - 81,699,269 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	80,743,482 - 80,760,336 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	83,991,793 - 84,008,946 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	83,992,076 - 84,008,946 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	11	87,064,115 - 87,081,268 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	11	82,535,711 - 82,552,800 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	11	79,146,019 - 79,162,890 (-)	NCBI		Celera
Cytogenetic Map	11	q23	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

butanal (ISO)

C60 fullerene (EXP)

carbon nanotube (ISO)

DDE (ISO)

dichloroacetic acid (ISO)

Diisodecyl phthalate (ISO)

endosulfan (EXP)

ethanol (ISO)

ethylparaben (ISO)

gentamycin (EXP)

Licochalcone B (ISO)

O-methyleugenol (ISO)

okadaic acid (ISO)

paracetamol (EXP,ISO)

PCB138 (EXP)

pentanal (ISO)

perfluorohexanesulfonic acid (ISO)

propanal (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

urethane (ISO)

valproic acid (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	GOA pipeline	RGD automated data pipeline
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:25002582

Genomics

Comparative Map Data

Vwa5b2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	93,810,456 - 93,827,609 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	11	93,810,739 - 93,826,205 (-)	Ensembl				GRCr8
mRatBN7.2	11	80,306,067 - 80,323,220 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	80,306,350 - 80,323,220 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	11	89,028,997 - 89,045,850 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	81,682,416 - 81,699,269 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	80,743,482 - 80,760,336 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	83,991,793 - 84,008,946 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	83,992,076 - 84,008,946 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	11	87,064,115 - 87,081,268 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	11	82,535,711 - 82,552,800 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	11	79,146,019 - 79,162,890 (-)	NCBI		Celera
Cytogenetic Map	11	q23	NCBI

VWA5B2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	184,229,585 - 184,242,329 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	184,228,996 - 184,242,342 (+)	Ensembl			hg38	GRCh38
GRCh37	3	183,947,373 - 183,960,117 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	185,431,011 - 185,442,814 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	3	182,389,082 - 182,400,881 (+)	NCBI		Celera
Cytogenetic Map	3	q27.1	NCBI
HuRef	3	181,354,091 - 181,367,086 (+)	NCBI		HuRef
CHM1_1	3	183,912,739 - 183,924,539 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	187,038,539 - 187,051,613 (+)	NCBI		T2T-CHM13v2.0

Vwa5b2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	20,408,174 - 20,424,128 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	20,408,221 - 20,424,127 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	16	20,589,428 - 20,605,378 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	20,589,471 - 20,605,377 (+)	Ensembl			mm10	GRCm38
MGSCv37	16	20,589,655 - 20,605,450 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	16	20,503,689 - 20,511,991 (+)	NCBI		MGSCv36	mm8
Celera	16	21,153,658 - 21,169,453 (+)	NCBI		Celera
Cytogenetic Map	16	A3	NCBI
cM Map	16	12.47	NCBI

Vwa5b2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	23,242,396 - 23,251,352 (-)	Ensembl
ChiLan1.0	NW_004955420	23,243,197 - 23,253,202 (-)	NCBI	ChiLan1.0	ChiLan1.0

VWA5B2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	182,099,925 - 182,112,763 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	182,104,590 - 182,117,480 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	181,263,976 - 181,276,843 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	189,747,074 - 189,759,699 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	189,747,903 - 189,764,378 (+)	Ensembl			panPan2	panpan1.1

VWA5B2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	17,125,012 - 17,135,285 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	17,123,642 - 17,135,287 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	21,210,104 - 21,221,672 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	17,031,429 - 17,042,994 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	17,030,996 - 17,043,950 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	17,068,759 - 17,080,330 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	17,064,626 - 17,076,186 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	17,294,854 - 17,306,415 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Vwa5b2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	119,530,349 - 119,543,840 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936578	5,622,475 - 5,634,760 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936578	5,622,201 - 5,634,807 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

VWA5B2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	5,182,536 - 5,194,820 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	5,182,830 - 5,193,998 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666063	13,959,768 - 13,974,068 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Vwa5b2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	72,343,660 - 72,354,098 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624730	72,343,400 - 72,354,625 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Vwa5b2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	5,414,799 - 5,430,093 (+)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	50
Count of miRNA genes:	48
Interacting mature miRNAs:	50
Transcripts:	ENSRNOT00000037612
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70208	Niddm22	Non-insulin dependent diabetes mellitus QTL 22	3.61		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	11	73308487	96070872	Rat
1581565	Pur10	Proteinuria QTL 10		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	58272363	96350770	Rat
4889859	Pur28	Proteinuria QTL 28	19.5	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	11	58928336	99753367	Rat
1549848	Bvd6	Brain ventricular dilatation QTL 6	3.1	0.0001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	11	79618519	99753367	Rat
10450831	Scl80	Serum cholesterol level QTL 80	4.7	0.01	blood LDL cholesterol amount (VT:0000181)	blood low density lipoprotein cholesterol level (CMO:0000053)	11	90461781	96556255	Rat
10058954	Gmadr7	Adrenal mass QTL 7	2.49	0.0049	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	73850894	99753367	Rat
1300135	Rf19	Renal function QTL 19	3.38		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	11	54415391	96071021	Rat
1354656	Bvd3	Brain ventricular dilatation QTL 3	3.64	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	11	82951028	96351019	Rat
2312566	Glom20	Glomerulus QTL 20	3.6	0.001	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	57754837	96071021	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	20193549	96351019	Rat
724561	Plsm4	Polydactyly-luxate syndrome (PLS) morphotypes QTL 4		0.0003	forelimb integrity trait (VT:0010562)	front foot phalanges count (CMO:0001947)	11	67962184	99753367	Rat
631506	Bp104	Blood pressure QTL 104	2.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	73308315	99753367	Rat
4889521	Gluco62	Glucose level QTL 62	2.82	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	68599321	96497754	Rat
7411658	Foco27	Food consumption QTL 27	16.2	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	11	69855943	99753367	Rat
1581572	Uae35	Urinary albumin excretion QTL 35		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	58272363	96350770	Rat
1300110	Stl7	Serum triglyceride level QTL 7	4.64		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	11	51071021	96071021	Rat

Markers in Region

RH118405

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	80,305,753 - 80,305,906 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	83,991,480 - 83,991,632	NCBI	Rnor6.0
Rnor_5.0	11	87,063,802 - 87,063,954	UniSTS	Rnor5.0
RGSC_v3.4	11	82,535,115 - 82,535,267	UniSTS	RGSC3.4
Celera	11	79,145,423 - 79,145,575	UniSTS
Cytogenetic Map	11	q23	UniSTS

RH130739

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	80,306,086 - 80,306,274 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	83,991,813 - 83,992,000	NCBI	Rnor6.0
Rnor_5.0	11	87,064,135 - 87,064,322	UniSTS	Rnor5.0
RGSC_v3.4	11	82,535,448 - 82,535,635	UniSTS	RGSC3.4
Celera	11	79,145,756 - 79,145,943	UniSTS
RH 3.4 Map	11	658.0	UniSTS
Cytogenetic Map	11	q23	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	81	80	49	90	49	6	341	190	11	142	78	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001134535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248571	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088283	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088284	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270479	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270481	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001840417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005491021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010055950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010055951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC110855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000037612 ⟹ ENSRNOP00000035500

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	93,810,739 - 93,826,205 (-)	Ensembl
mRatBN7.2 Ensembl	11	80,306,350 - 80,323,220 (-)	Ensembl
Rnor_6.0 Ensembl	11	83,992,076 - 84,008,946 (-)	Ensembl

RefSeq Acc Id:

NM_001134535 ⟹ NP_001128007

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,739 - 93,827,609 (-)	NCBI
mRatBN7.2	11	80,306,350 - 80,323,220 (-)	NCBI
Rnor_6.0	11	83,992,076 - 84,008,946 (-)	NCBI
Rnor_5.0	11	87,064,115 - 87,081,268 (-)	NCBI
RGSC_v3.4	11	82,535,711 - 82,552,800 (-)	RGD
Celera	11	79,146,019 - 79,162,890 (-)	RGD

Sequence:

show sequence

CCTCAAGGTCCTGGGGGAGATTTTACAGACCTTCCTAATGTTTTGCAGTGAGAAACACGCAAAA
ACCCTTGTCAATTGCAAGGGACCTGTTCCACCACCCCCCAGCAAGAATGCCCCCGCCCCGTGCC
ATCTGATGGATGGGGGGCAGGGACCACCGCTGTGACGGGAGCAGCCCGCACCCTTGGGAAAGCT
AGAAAGCTTTACTCTTGAGGCCCTAGAGCAAGCAAGCCGTCCTGCGCATCCTCTCTACTCCCAG
AAAAGCAAGGGTATAACAACCCTGCAGGGAAGGCAGGCCAGGCTGCTTCCGGGTGGGGACGTCG
CGACAGTGATGGGGAGACAAGACTGAAGGAAGTCGCTTCGGATCTCCGCCGTAGTCCCGAGGTG
AATCGCGCAGGTGCAGGAACAAGGGCAGTCTGGAGCTCAGAGGGAGCATCACCCACTCCCCGTC
TGGTCGCAACGCCCCACAACTCCACCAAGAAGTAACGTTCTTCCTACTGCAACCTTTCAAGCGG
GTCTACAGCCTCTCACAGCACTCCAGTCACGAAAGCGCCACTTCCGACAGCTGGCAACCCTGGA
GAGACAGGAGGCAGGGGGCAGGTACGGGGGCGGCAGCGAGGCCCGGAGAAGGTGCAGGAACAGC
TGTGGACATCCACCCCCCAGGCTCGCAACCCGCAGCGGGACTGGCGTACGCCTGGACTGGAGGG
TTAACCATTAACCCTCCACTCCACCGTTGCCCAGAGCTGCGCTCTGCTCCTGCTACCCAGGGTG
GACACCATGCCCGGCCTGTACTGCCCCACCAGCTGGACGCCGCTGCCACTCACCGACTCCTGCG
TCCGGGCCTATGCCAAGGGACCCTGCCTCAGCCTGCGTGCCCGGCTCACCTACCACAACCCGCA
GCCCCAGCCGGTGGACGGCGTGTTCGTGTACCCTCTGGCTGAGGCGGAGGTGGTATCTGGCTTC
GAGGCTGAGGCGGCCGGACGGCGCGTCTCCTTCCAGCTGCAGAGCCGGCGCCGATTACAGGCTG
CCTGCTGTCGTGCTCTGGGCCCGGGACTGGGGACCTCTACGCCCCGCCGCTGCGCACAGGGTCA
TCTTGTCTTGGATCTGGCCCAAGCCCGGTCCACACTGGTGTTGCCCACTGGCCTTGTGGCTGCA
GATGGTGCCATGACAGTGACCCTGTGCAGCAGCCGGGAGTTGCCCTCCAGGCCTGATGGGGTGA
TGCATGTGGCCCTGCCCACTGTGTTCACCCCACTGGCCCAGCCAAACCTGCCAGGGTCCCCCAG
ATCTCCGGGGCTCTGTGACGACAGCCCCACCAGCTGCTTCGGGGCAGGCAGCCCTGAGGAGGAA
ACGCTGAGCTGGGAGCAACCAACTGCCCCTCCGGACGTGTTCTCAGGCCCTGCCCGCTGTCCTG
CTCCGTATACCTTCTCTTTCGAGATGCTAGTGACAGGACCATGTCTGTTGGCAGGCCTGGAGAG
CCCTTCTCATGCTCTGCGTGCAGATGCCCTCCCTCACGCCAGTTCTGCAGCAACTATCTGTGTC
ACCCTGGCAGAAGGCCACCAGTGTGACCGGGCCTTGGAGATCCTCTTGCACCCCAGTGAGCCCC
ATCAGCCACACTTGATGCTGGAGGCTGGCAGCTTGAGCTCAGCAGAATATGAGGCCCAAGTGAG
GGCCCGCCATGACTTTCAGAGGCTGCAGCAAAGAGACAATGATGGGGACCGACAGGTGTGGTTC
CTACAGCGACGTTTCCATAAGGACATCTTGCTGAACCCTGTGCTGGTGCTGAACTTCTGCCCAG
ACCTGAGTGCCAAGCCTGGACACTTGAATGCAGCTACCCGGGAGCTCCTCTTCCTGTTAGATAG
CAGTGGTGCAGTTCACAAGGATGCCATTGTTTTGGCTGTAAAATCCCTCCCAGCCCAGACGCTA
GTCAACCTGGCCATATTTGGGACATTGGTACAGCCACTCTTCCCAGAGAGCCGGCCTTGCAGTG
ATGACACTGTGCAGCTGATCTGTGAGACCATTGAGACTCTTCAGACTGTGAGTGGCCCCCCTGA
TATGCTGGCTGTATTGGATTGGGCCTTAGGGCAGCCCCAGCACAGGGCCCACCCTCGACAGCTG
TTCCTGCTCACTGCTGCCTCACCAACAGTTGCTACTACTCACCAAGCCCTGGAGTTCATGAGGT
GGCACAGAGGGGCAGCCAGGTGCTTCTCCTTTGCCTTGGCACCTGCCTGCCACCAGCTGCTCAG
TGACTTGTCTGTCCTCAGCAGGGGGCAGGCTTACTTCCTGAGGCCTGGGGAGAGACTTCAACCT
AAGCTGGTACAGGCTCTGCGGAAGGCACTGGAACCTGCTTTGAGTGACATCTCCGTGGACTGGT
TTGTGCCTGATGCGGTGGAAGCATTGTTGACACCTCGGGAGATCCCAGCACTCTACCCTGGGGA
CCAGCTGCTTGGCTACTGCTCACTTTTCAGGGTTGATGGCTTCCGGTCCCGTGCTCTAGGGGGC
CAAGAGCCTGGTTGGCAGAGCTTGGGTGGTTCAGTCTTCCCATCTCCAGAGGAGGTGATATCTG
TCACCAGCCCTGGCACTGAGCCTACGCACACCACGGAGCCACTGGGAACAGGCACTGTGTCAGC
AGAGCTGTCGAGCCCATGGGCTATAGGAGACTCAGAGCAGACAGGTATGGAAGCTCTGACAGAC
CCAGTTACGGACCCGGGACCTAATCTGTCATCAGACACAGCCATTTGGCGGCGCATCTTCCAGT
CCTCATACATCCGGGAGCAGTATGTGCTTACCCACTGCTCTGCCAGCCCCGAGCCAGGCCCAGG
CTCTACCTGCAGTAGCGAGTCCCCTGGCTCCCAAGGCCCTGGCTCCCCCCATGGTAGCCTTCCC
CTGGATCCCCCTTCTCAGCAGGGCTGCCGAAGCCTGACCTGGGTAGAACCTGCAGGCTCCCGCT
CCTGCCCCCTGCCTGTACCCCCGCCATCTCCATTCAAGGTGGGAGCCATGAGCGCTGAAGTGCT
GGGCCGTCGGCAAAGAGCAGCTTTGGCTGGTCGAAGTCTGTCGTCTCCCTCAGGCCGGGCAAAC
CCAGTCCCTGGTAGACCCCGGCACCCGTCTCTAGATGCAATACCCGATGGATCAGGCCCTGAGC
CAGGACAACAGCTGGGTCAGGGCCTCGATGATTCAGCCCCCTTGGACTGGGATATGTTGATGGA
GCCATCTTTCTTATTCAAGCCCGTGCCACCCAATGGGGAATCAGCTCCTCCAGCAGAACCGCTG
CCTCCTCAGGCTCCACGTTGTCACGTGGTGATCCGGGCCCTCTGTGGGGAACAGCCAATGTGCT
GGGAGGTGGGTGTTGGGCTGGAGGAACTCTGGGGTCCTGGGGATAGCTCCCAGCCTGCACCACT
TCCGATGAGAGAAGCTGCGTGGGACCAGGCACTTCACCGGCTGACAGCAGCCTCTGTGGTCCAG
GACAACGAACAGCTGGCTCTCCGTGGGAGAGCTGAAACCGCGGCTGAGCAGGGCAGAGTCAGAA
GGTCCTGGCTCAGAGCCATTCAGACAAGCAAGGTCAGCTCGGCCCCATCCTGCTTTACTTGCCC
TGTTGCTGTAGATGCTACCACTAGGGAGGTCTTGCCCGGAGCCCTGCAGGTGTGGAGTTCAGAT
CCAGCTGAGTTCTCAGGCGTGTCTGCCTCTCAAGACCATCTAGCTGTTGCCCCTCTGTCCACAG
CAGTCCACTCTAAAGGACATCAGGGAGGCTGTTCTGCAGGTGCCTGGGACCTGGACCTAAATGA
CAACTCCAAGTCAGCATTGGGGGAGTCCATATCTCCTACTGGAGGTCATCATGGCTTGCCCCAC
CAGCCTCCAGCCTCTTCCAGGCTCAGCCTGGGTCATCATCGCAGACTTTGCAGCTCCAATAAGG
GCCAGACTCATGAGAACAGCAACGAAGCCAGCAGCCATGACTACCTGCCTTTGGTACGACTGCA
AGAGGCTCCAGGCTCCTTCCGCCTGGATGAACCCTTCTGTGCTGCTGTGAGCATTCCTCAGGAA
CGCCTGTGTCGAGCCTCTCCCTTTGCTGCACACCGCGCCAGCCTCAGCCCCACCTCAACCTCAT
CTCCTTGGGCATTTCTGGGCCCTGGTGTTGGCCAAGGTGACAGTGCCACAGCCTCCTGCAGTCA
ACCCTCCAGCTCGGGTTCTGAAGGCCCAGGCCAGGCAGACAGTGGGAGAGGCTCGGACACCGAG
GCGTCGGAAAGAATGGAAGAGAGGGAAAGCTCGGATCTCCGTGGGCGCACCTGGGCCACAGCCG
TGGCCCTGGCATGGTTGGAACACCGCTGCGCAGCTGCCTTCGGCGAGTGGGAACTAACAGCTTC
CAAAGCTGACTGCTGGCTGAGGGCTCAACGCCTGCCAGATGGCCTTGATCTGACTGCTCTTAAG
GCCGCTGCCCGGGGGCTCTTTCTGTTACTGCGGCACTGGGACCAGAATCTGCAGCTGCACCTGC
TGTGTTACAGCCCTTCGAACGTGTAAGGC

hide sequence

RefSeq Acc Id:

XM_006248571 ⟹ XP_006248633

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,456 - 93,822,427 (-)	NCBI
mRatBN7.2	11	80,306,067 - 80,318,038 (-)	NCBI
Rnor_6.0	11	83,991,793 - 84,003,637 (-)	NCBI
Rnor_5.0	11	87,064,115 - 87,081,268 (-)	NCBI

Sequence:

show sequence

GACAGGTTGGGCCTATGGTGATTCTCTTCATCCCTCCCTCAAGTTCTCTGGGTCTAGTGCGGCC
CCACCAGCTGCTTCGGGGCAGGCAGCCCTGAGGAGGAAACGCTGAGCTGGGAGCAACCAACTGC
CCCTCCGGACGTGTTCTCAGGCCCTGCCCGCTGTCCTGCTCCGTATACCTTCTCTTTCGAGATG
CTAGTGACAGGACCATGTCTGTTGGCAGGCCTGGAGAGCCCTTCTCATGCTCTGCGTGCAGATG
CCCTCCCTCACGCCAGTTCTGCAGCAACTATCTGTGTCACCCTGGCAGAAGGCCACCAGTGTGA
CCGGGCCTTGGAGATCCTCTTGCACCCCAGTGAGCCCCATCAGCCACACTTGATGCTGGAGGCT
GGCAGCTTGAGCTCAGCAGAATATGAGGCCCAAGTGAGGGCCCGCCATGACTTTCAGAGGCTGC
AGCAAAGAGACAATGATGGGGACCGACAGGTGTGGTTCCTACAGCGACGTTTCCATAAGGACAT
CTTGCTGAACCCTGTGCTGGTGCTGAACTTCTGCCCAGACCTGAGTGCCAAGCCTGGACACTTG
AATGCAGCTACCCGGGAGCTCCTCTTCCTGTTAGATAGCAGTGGTGCAGTTCACAAGGATGCCA
TTGTTTTGGCTGTAAAATCCCTCCCAGCCCAGACGCTAGTCAACCTGGCCATATTTGGGACATT
GGTACAGCCACTCTTCCCAGAGAGCCGGCCTTGCAGTGATGACACTGTGCAGCTGATCTGTGAG
ACCATTGAGACTCTTCAGACTGTGAGTGGCCCCCCTGATATGCTGGCTGTATTGGATTGGGCCT
TAGGGCAGCCCCAGCACAGGGCCCACCCTCGACAGCTGTTCCTGCTCACTGCTGCCTCACCAAC
AGTTGCTACTACTCACCAAGCCCTGGAGTTCATGAGGTGGCACAGAGGGGCAGCCAGGTGCTTC
TCCTTTGCCTTGGCACCTGCCTGCCACCAGCTGCTCAGTGACTTGTCTGTCCTCAGCAGGGGGC
AGGCTTACTTCCTGAGGCCTGGGGAGAGACTTCAACCTAAGCTGGTACAGGCTCTGCGGAAGGC
ACTGGAACCTGCTTTGAGTGACATCTCCGTGGACTGGTTTGTGCCTGATGCGGTGGAAGCATTG
TTGACACCTCGGGAGATCCCAGCACTCTACCCTGGGGACCAGCTGCTTGGCTACTGCTCACTTT
TCAGGGTTGATGGCTTCCGGTCCCGTGCTCTAGGGGGCCAAGAGCCTGGTTGGCAGAGCTTGGG
TGGTTCAGTCTTCCCATCTCCAGAGGAGGTGATATCTGTCACCAGCCCTGGCACTGAGCCTACG
CACACCACGGAGCCACTGGGAACAGGCACTGTGTCAGCAGAGCTGTCGAGCCCATGGGCTATAG
GAGACTCAGAGCAGACAGGTATGGAAGCTCTGACAGACCCAGTTACGGACCCGGGACCTAATCT
GTCATCAGACACAGCCATTTGGCGGCGCATCTTCCAGTCCTCATACATCCGGGAGCAGTATGTG
CTTACCCACTGCTCTGCCAGCCCCGAGCCAGGCCCAGGCTCTACCTGCAGTAGCGAGTCCCCTG
GCTCCCAAGGCCCTGGCTCCCCCCATGGTAGCCTTCCCCTGGATCCCCCTTCTCAGCAGGGCTG
CCGAAGCCTGACCTGGGTAGAACCTGCAGGCTCCCGCTCCTGCCCCCTGCCTGTACCCCCGCCA
TCTCCATTCAAGGTGGGAGCCATGAGCGCTGAAGTGCTGGGCCGTCGGCAAAGAGCAGCTTTGG
CTGGTCGAAGTCTGTCGTCTCCCTCAGGCCGGGCAAACCCAGTCCCTGGTAGACCCCGGCACCC
GTCTCTAGATGCAATACCCGATGGATCAGGCCCTGAGCCAGGACAACAGCTGGGTCAGGGCCTC
GATGATTCAGGAAACCTGCTATCCCCAGCCCCCTTGGACTGGGATATGTTGATGGAGCCATCTT
TCTTATTCAAGCCCGTGCCACCCAATGGGGAATCAGCTCCTCCAGCAGAACCGCTGCCTCCTCA
GGCTCCACGTTGTCACGTGGTGATCCGGGCCCTCTGTGGGGAACAGCCAATGTGCTGGGAGGTG
GGTGTTGGGCTGGAGGAACTCTGGGGTCCTGGGGATAGCTCCCAGCCTGCACCACTTCCGATGA
GAGAAGCTGCGTGGGACCAGGCACTTCACCGGCTGACAGCAGCCTCTGTGGTCCAGGACAACGA
ACAGCTGGCTCTCCGTGGGAGAGCTGAAACCGCGGCTGAGCAGGGCAGAGTCAGAAGGTCCTGG
CTCAGAGCCATTCAGACAAGCAAGGTCAGCTCGGCCCCATCCTGCTTTACTTGCCCTGTTGCTG
TAGATGCTACCACTAGGGAGGTCTTGCCCGGAGCCCTGCAGGTGTGGAGTTCAGATCCAGCTGA
GTTCTCAGGCGTGTCTGCCTCTCAAGACCATCTAGCTGTTGCCCCTCTGTCCACAGCAGTCCAC
TCTAAAGGTGCCTGGGACCTGGACCTAAATGACAACTCCAAGTCAGCATTGGGGGAGTCCATAT
CTCCTACTGGAGGTCATCATGGCTTGCCCCACCAGCCTCCAGCCTCTTCCAGGCTCAGCCTGGG
TCATCATCGCAGACTTTGCAGCTCCAATAAGGGCCAGACTCATGAGAACAGCAACGAAGCCAGC
AGCCATGACTACCTGCCTTTGGTACGACTGCAAGAGGCTCCAGGCTCCTTCCGCCTGGATGAAC
CCTTCTGTGCTGCTGTGAGCATTCCTCAGGAACGCCTGTGTCGAGCCTCTCCCTTTGCTGCACA
CCGCGCCAGCCTCAGCCCCACCTCAACCTCATCTCCTTGGGCATTTCTGGGCCCTGGTGTTGGC
CAAGGTGACAGTGCCACAGCCTCCTGCAGTCAACCCTCCAGCTCGGGTTCTGAAGGCCCAGGCC
AGGCAGACAGTGGGAGAGGCTCGGACACCGAGGCGTCGGAAAGAATGGAAGAGAGGGAAAGCTC
GGATCTCCGTGGGCGCACCTGGGCCACAGCCGTGGCCCTGGCATGGTTGGAACACCGCTGCGCA
GCTGCCTTCGGCGAGTGGGAACTAACAGCTTCCAAAGCTGACTGCTGGCTGAGGGCTCAACGCC
TGCCAGATGGCCTTGATCTGACTGCTCTTAAGGCCGCTGCCCGGGGGCTCTTTCTGTTACTGCG
GCACTGGGACCAGAATCTGCAGCTGCACCTGCTGTGTTACAGCCCTTCGAACGTGTAAGGCTGC
TTGCAGCTCTGGCTAGCCACCCCCAACACAGTCACTGCCACCCAGGGCCAGCCTCTTGGTACTG
GGAAAGAAAGAATGCATTGGTGTCTGCTGTCCTCCATTGCTTCACTCACACACACCCCTCTGAA
TATTGTTGCCACCACAGAAAGTGCCTGCCTGTGCTCTCTTCTCTCTCTGCCCAGTCCATACCCC
TCCTATGTGCTCTGAGCTCTCTATAGGATGCGGAAGAGGAGAGAGCCACAGTCCCAATTCCTAT
GCAATAAAGTGCCTCTTAAGACTG

hide sequence

RefSeq Acc Id:

XM_017597969 ⟹ XP_017453458

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,456 - 93,827,437 (-)	NCBI
mRatBN7.2	11	80,306,067 - 80,322,551 (-)	NCBI
Rnor_6.0	11	83,991,793 - 84,008,030 (-)	NCBI

Sequence:

show sequence

TGCAGGAACAAGGGCAGTCTGGAGCTCAGAGGGAGCATCACCCACTCCCCGTCTGGTCGCAACG
CCCCACAACTCCACCAAGAAGTAACGCGCCACTTCCGACAGCTGGCAACCCTGGAGAGACAGGA
GGCAGGGGGCAGGTACGGGGGCGGCAGCGAGGCCCGGAGAAGGTGCAGGAACAGCTGTGGACAT
CCACCCCCCAGGCTCGCAACCCGCAGCGGGACTGGCGTACGCCTGGACTGGAGGGTTAACCATT
AACCCTCCACTCCACCGTTGCCCAGAGCTGCGCTCTGCTCCTGCTACCCAGGGTGGACACCATG
CCCGGCCTGTACTGCCCCACCAGCTGGACGCCGCTGCCACTCACCGACTCCTGCGTCCGGGCCT
ATGCCAAGGGACCCTGCCTCAGCCTGCGTGCCCGGCTCACCTACCACAACCCGCAGCCCCAGCC
GGTGGACGGCGTGTTCGTGTACCCTCTGGCTGAGGCGGAGGTGGTATCTGGCTTCGAGGCTGAG
GCGGCCGGACGGCGCGTCTCCTTCCAGCTGCAGAGCCGGCGCCGATTACAGGCTGCCTGCTGTC
GTGCTCTGGGCCCGGGACTGGGGACCTCTACGCCCCGCCGCTGCGCACAGGGTCATCTTGTCTT
GGATCTGGCCCAAGCCCGGTCCACACTGGTGTTGCCCACTGGCCTTGTGGCTGCAGATGGTGCC
ATGACAGTGACCCTGTGCAGCAGCCGGGAGTTGCCCTCCAGGCCTGATGGGGTGATGCATGTGG
CCCTGCCCACTGTGTTCACCCCACTGGCCCAGCCAAACCTGCCAGGGTCCCCCAGATCTCCGGG
GCTCTGTGACGACAGGTTGGGCCTATGCCCCACCAGCTGCTTCGGGGCAGGCAGCCCTGAGGAG
GAAACGCTGAGCTGGGAGCAACCAACTGCCCCTCCGGACGTGTTCTCAGGCCCTGCCCGCTGTC
CTGCTCCGTATACCTTCTCTTTCGAGATGCTAGTGACAGGACCATGTCTGTTGGCAGGCCTGGA
GAGCCCTTCTCATGCTCTGCGTGCAGATGCCCTCCCTCACGCCAGTTCTGCAGCAACTATCTGT
GTCACCCTGGCAGAAGGCCACCAGTGTGACCGGGCCTTGGAGATCCTCTTGCACCCCAGTGAGC
CCCATCAGCCACACTTGATGCTGGAGGCTGGCAGCTTGAGCTCAGCAGAATATGAGGCCCAAGT
GAGGGCCCGCCATGACTTTCAGAGGCTGCAGCAAAGAGACAATGATGGGGACCGACAGGTGTGG
TTCCTACAGCGACGTTTCCATAAGGACATCTTGCTGAACCCTGTGCTGGTGCTGAACTTCTGCC
CAGACCTGAGTGCCAAGCCTGGACACTTGAATGCAGCTACCCGGGAGCTCCTCTTCCTGTTAGA
TAGCAGTGGTGCAGTTCACAAGGATGCCATTGTTTTGGCTGTAAAATCCCTCCCAGCCCAGACG
CTAGTCAACCTGGCCATATTTGGGACATTGGTACAGCCACTCTTCCCAGAGAGCCGGCCTTGCA
GTGATGACACTGTGCAGCTGATCTGTGAGACCATTGAGACTCTTCAGACTGTGAGTGGCCCCCC
TGATATGCTGGCTGTATTGGATTGGGCCTTAGGGCAGCCCCAGCACAGGGCCCACCCTCGACAG
CTGTTCCTGCTCACTGCTGCCTCACCAACAGTTGCTACTACTCACCAAGCCCTGGAGTTCATGA
GGTGGCACAGAGGGGCAGCCAGGTGCTTCTCCTTTGCCTTGGCACCTGCCTGCCACCAGCTGCT
CAGTGACTTGTCTGTCCTCAGCAGGGGGCAGGCTTACTTCCTGAGGCCTGGGGAGAGACTTCAA
CCTAAGCTGGTACAGGCTCTGCGGAAGGCACTGGAACCTGCTTTGAGTGACATCTCCGTGGACT
GGTTTGTGCCTGATGCGGTGGAAGCATTGTTGACACCTCGGGAGATCCCAGCACTCTACCCTGG
GGACCAGCTGCTTGGCTACTGCTCACTTTTCAGGGTTGATGGCTTCCGGTCCCGTGCTCTAGGG
GGCCAAGAGCCTGGTTGGCAGAGCTTGGGTGGTTCAGTCTTCCCATCTCCAGAGGAGGTGATAT
CTGTCACCAGCCCTGGCACTGAGCCTACGCACACCACGGAGCCACTGGGAACAGGCACTGTGTC
AGCAGAGCTGTCGAGCCCATGGGCTATAGGAGACTCAGAGCAGACAGGTATGGAAGCTCTGACA
GACCCAGTTACGGACCCGGGACCTAATCTGTCATCAGACACAGCCATTTGGCGGCGCATCTTCC
AGTCCTCATACATCCGGGAGCAGTATGTGCTTACCCACTGCTCTGCCAGCCCCGAGCCAGGCCC
AGGCTCTACCTGCAGTAGCGAGTCCCCTGGCTCCCAAGGCCCTGGCTCCCCCCATGGTAGCCTT
CCCCTGGATCCCCCTTCTCAGCAGGGCTGCCGAAGCCTGACCTGGGTAGAACCTGCAGGCTCCC
GCTCCTGCCCCCTGCCTGTACCCCCGCCATCTCCATTCAAGGTGGGAGCCATGAGCGCTGAAGT
GCTGGGCCGTCGGCAAAGAGCAGCTTTGGCTGGTCGAAGTCTGTCGTCTCCCTCAGGCCGGGCA
AACCCAGTCCCTGGTAGACCCCGGCACCCGTCTCTAGATGCAATACCCGATGGATCAGGCCCTG
AGCCAGGACAACAGCTGGGTCAGGGCCTCGATGATTCAGGAAACCTGCTATCCCCAGCCCCCTT
GGACTGGGATATGTTGATGGAGCCATCTTTCTTATTCAAGCCCGTGCCACCCAATGGGGAATCA
GCTCCTCCAGCAGAACCGCTGCCTCCTCAGGCTCCACGTTGTCACGTGGTGATCCGGGCCCTCT
GTGGGGAACAGCCAATGTGCTGGGAGGTGGGTGTTGGGCTGGAGGAACTCTGGGGTCCTGGGGA
TAGCTCCCAGCCTGCACCACTTCCGATGAGAGAAGCTGCGTGGGACCAGGCACTTCACCGGCTG
ACAGCAGCCTCTGTGGTCCAGGACAACGAACAGCTGGCTCTCCGTGGGAGAGCTGAAACCGCGG
CTGAGCAGGGCAGAGTCAGAAGGTCCTGGCTCAGAGCCATTCAGACAAGCAAGGTCAGCTCGGC
CCCATCCTGCTTTACTTGCCCTGTTGCTGTAGATGCTACCACTAGGGAGGTCTTGCCCGGAGCC
CTGCAGGTGTGGAGTTCAGATCCAGCTGAGTTCTCAGGCGTGTCTGCCTCTCAAGACCATCTAG
CTGTTGCCCCTCTGTCCACAGCAGTCCACTCTAAAGGTGCCTGGGACCTGGACCTAAATGACAA
CTCCAAGTCAGCATTGGGGGAGTCCATATCTCCTACTGGAGGTCATCATGGCTTGCCCCACCAG
CCTCCAGCCTCTTCCAGGCTCAGCCTGGGTCATCATCGCAGACTTTGCAGCTCCAATAAGGGCC
AGACTCATGAGAACAGCAACGAAGCCAGCAGCCATGACTACCTGCCTTTGGTACGACTGCAAGA
GGCTCCAGGCTCCTTCCGCCTGGATGAACCCTTCTGTGCTGCTGTGAGCATTCCTCAGGAACGC
CTGTGTCGAGCCTCTCCCTTTGCTGCACACCGCGCCAGCCTCAGCCCCACCTCAACCTCATCTC
CTTGGGCATTTCTGGGCCCTGGTGTTGGCCAAGGTGACAGTGCCACAGCCTCCTGCAGTCAACC
CTCCAGCTCGGGTTCTGAAGGCCCAGGCCAGGCAGACAGTGGGAGAGGCTCGGACACCGAGGCG
TCGGAAAGAATGGAAGAGAGGGAAAGCTCGGATCTCCGTGGGCGCACCTGGGCCACAGCCGTGG
CCCTGGCATGGTTGGAACACCGCTGCGCAGCTGCCTTCGGCGAGTGGGAACTAACAGCTTCCAA
AGCTGACTGCTGGCTGAGGGCTCAACGCCTGCCAGATGGCCTTGATCTGACTGCTCTTAAGGCC
GCTGCCCGGGGGCTCTTTCTGTTACTGCGGCACTGGGACCAGAATCTGCAGCTGCACCTGCTGT
GTTACAGCCCTTCGAACGTGTAAGGCTGCTTGCAGCTCTGGCTAGCCACCCCCAACACAGTCAC
TGCCACCCAGGGCCAGCCTCTTGGTACTGGGAAAGAAAGAATGCATTGGTGTCTGCTGTCCTCC
ATTGCTTCACTCACACACACCCCTCTGAATATTGTTGCCACCACAGAAAGTGCCTGCCTGTGCT
CTCTTCTCTCTCTGCCCAGTCCATACCCCTCCTATGTGCTCTGAGCTCTCTATAGGATGCGGAA
GAGGAGAGAGCCACAGTCCCAATTCCTATGCAATAAAGTGCCTCTTAAGACTG

hide sequence

RefSeq Acc Id:

XM_017597972 ⟹ XP_017453461

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,456 - 93,827,604 (-)	NCBI
mRatBN7.2	11	80,306,353 - 80,323,215 (-)	NCBI
Rnor_6.0	11	83,991,793 - 84,008,066 (-)	NCBI

Sequence:

show sequence

GGATCTCCGCCGTAGTCCCGAGGTGAATCGCGCAGGTGCAGGAACAAGGGCAGTCTGGAGCTCA
GAGGGAGCATCACCCACTCCCCGTCTGGTCGCAACGCCCCACAACTCCACCAAGAAGTAACGTT
CTTCCTACTGCAACCTTTCAAGCGGGTCTACAGCCTCTCACAGCACTCCAGTCACGAAAGCGCC
ACTTCCGACAGCTGGCAACCCTGGAGAGACAGGAGGCAGGGGGCAGGTACGGGGGCGGCAGCGA
GGCCCGGAGAAGGTGCAGGAACAGCTGTGGACATCCACCCCCCAGGCTCGCAACCCGCAGCGGG
ACTGGCGTACGCCTGGACTGGAGGGTTAACCATTAACCCTCCACTCCACCGTTGCCCAGAGCTG
CGCTCTGCTCCTGCTACCCAGGGTGGACACCATGCCCGGCCTGTACTGCCCCACCAGCTGGACG
CCGCTGCCACTCACCGACTCCTGCGTCCGGGCCTATGCCAAGGGACCCTGCCTCAGCCTGCGTG
CCCGGCTCACCTACCACAACCCGCAGCCCCAGCCGGTGGACGGCGTGTTCGTGTACCCTCTGGC
TGAGGCGGAGGTGGTATCTGGCTTCGAGGCTGAGGCGGCCGGACGGCGCGTCTCCTTCCAGCTG
CAGAGCCGGCGCCGATTACAGGCTGCCTGCTGTCGTGCTCTGGGCCCGGGACTGGGGACCTCTA
CGCCCCGCCGCTGCGCACAGGGTCATCTTGTCTTGGATCTGGCCCAAGCCCGGTCCACACTGGT
GTTGCCCACTGGCCTTGTGGCTGCAGATGGTGCCATGACAGTGACCCTGTGCAGCAGCCGGGAG
TTGCCCTCCAGGCCTGATGGGGTGATGCATGTGGCCCTGCCCACTGTGTTCACCCCACTGGCCC
AGCCAAACCTGCCAGGGTCCCCCAGATCTCCGGGGCTCTGTGACGACAGCCCCACCAGCTGCTT
CGGGGCAGGCAGCCCTGAGGAGGAAACGCTGAGCTGGGAGCAACCAACTGCCCCTCCGGACGTG
TTCTCAGGCCCTGCCCGCTGTCCTGCTCCGTATACCTTCTCTTTCGAGATGCTAGTGACAGGAC
CATGTCTGTTGGCAGGCCTGGAGAGCCCTTCTCATGCTCTGCGTGCAGATGCCCTCCCTCACGC
CAGTTCTGCAGCAACTATCTGTGTCACCCTGGCAGAAGGCCACCAGTGTGACCGGGCCTTGGAG
ATCCTCTTGCACCCCAGTGAGCCCCATCAGCCACACTTGATGCTGGAGGCTGGCAGCTTGAGCT
CAGCAGAATATGAGGCCCAAGTGAGGGCCCGCCATGACTTTCAGAGGCTGCAGCAAAGAGACAA
TGATGGGGACCGACAGGTGTGGTTCCTACAGCGACGTTTCCATAAGGACATCTTGCTGAACCCT
GTGCTGGTGCTGAACTTCTGCCCAGACCTGAGTGCCAAGCCTGGACACTTGAATGCAGCTACCC
GGGAGCTCCTCTTCCTGTTAGATAGCAGTGGTGCAGTTCACAAGGATGCCATTGTTTTGGCTGT
AAAATCCCTCCCAGCCCAGACGCTAGTCAACCTGGCCATATTTGGGACATTGGTACAGCCACTC
TTCCCAGAGAGCCGGCCTTGCAGTGATGACACTGTGCAGCTGATCTGTGAGACCATTGAGACTC
TTCAGACTGTGAGTGGCCCCCCTGATATGCTGGCTGTATTGGATTGGGCCTTAGGGCAGCCCCA
GCACAGGGCCCACCCTCGACAGCTGTTCCTGCTCACTGCTGCCTCACCAACAGTTGCTACTACT
CACCAAGCCCTGGAGTTCATGAGGTGGCACAGAGGGGCAGCCAGGTGCTTCTCCTTTGCCTTGG
CACCTGCCTGCCACCAGCTGCTCAGTGACTTGTCTGTCCTCAGCAGGGGGCAGGCTTACTTCCT
GAGGCCTGGGGAGAGACTTCAACCTAAGCTGGTACAGGCTCTGCGGAAGGCACTGGAACCTGCT
TTGAGTGACATCTCCGTGGACTGGTTTGTGCCTGATGCGGTGGAAGCATTGTTGACACCTCGGG
AGATCCCAGCACTCTACCCTGGGGACCAGCTGCTTGGCTACTGCTCACTTTTCAGGGTTGATGG
CTTCCGGTCCCGTGCTCTAGGGGGCCAAGAGCCTGGTTGGCAGAGCTTGGGTGGTTCAGTCTTC
CCATCTCCAGAGGAGGTGATATCTGTCACCAGCCCTGGCACTGAGCCTACGCACACCACGGAGC
CACTGGGAACAGGCACTGTGTCAGCAGAGCTGTCGAGCCCATGGGCTATAGGAGACTCAGAGCA
GACAGGTATGGAAGCTCTGACAGACCCAGTTACGGACCCGGGACCTAATCTGTCATCAGACACA
GCCATTTGGCGGCGCATCTTCCAGTCCTCATACATCCGGGAGCAGTATGTGCTTACCCACTGCT
CTGCCAGCCCCGAGCCAGGCCCAGGCTCTACCTGCAGTAGCGAGTCCCCTGGCTCCCAAGGCCC
TGGCTCCCCCCATGGTAGCCTTCCCCTGGATCCCCCTTCTCAGCAGGGCTGCCGAAGCCTGACC
TGGGTAGAACCTGCAGGCTCCCGCTCCTGCCCCCTGCCTGTACCCCCGCCATCTCCATTCAAGG
TGGGAGCCATGAGCGCTGAAGTGCTGGGCCGTCGGCAAAGAGCAGCTTTGGCTGGTCGAAGTCT
GTCGTCTCCCTCAGGCCGGGCAAACCCAGTCCCTGGTAGACCCCGGCACCCGTCTCTAGATGCA
ATACCCGATGGATCAGGCCCTGAGCCAGGACAACAGCTGGGTCAGGGCCTCGATGATTCAGGAA
ACCTGCTATCCCCAGCCCCCTTGGACTGGGATATGTTGATGGAGCCATCTTTCTTATTCAAGCC
CGTGCCACCCAATGGGGAATCAGCTCCTCCAGCAGAACCGCTGCCTCCTCAGGCTCCACGTTGT
CACGTGGTGATCCGGGCCCTCTGTGGGGAACAGCCAATGTGCTGGGAGGTGGGTGTTGGGCTGG
AGGAACTCTGGGGTCCTGGGGATAGCTCCCAGCCTGCACCACTTCCGATGAGAGAAGCTGCGTG
GGACCAGGCACTTCACCGGCTGACAGCAGCCTCTGTGGTCCAGGACAACGAACAGCTGGCTCTC
CGTGGGAGAGCTGAAACCGCGGCTGAGCAGGGCAGAGTCAGAAGGTCCTGGCTCAGAGCCATTC
AGACAAGCAAGGTCAGCTCGGCCCCATCCTGCTTTACTTGCCCTGTTGCTGTAGATGCTACCAC
TAGGGAGGTCTTGCCCGGAGCCCTGCAGGTGTGGAGTTCAGATCCAGCTGAGTTCTCAGGCGTG
TCTGCCTCTCAAGACCATCTAGCTGTTGCCCCTCTGTCCACAGCAGTCCACTCTAAAGGTGCCT
GGGACCTGGACCTAAATGACAACTCCAAGTCAGCATTGGGGGAGTCCATATCTCCTACTGGAGG
TCATCATGGCTTGCCCCACCAGCCTCCAGCCTCTTCCAGGCTCAGCCTGGGTCATCATCGCAGA
CTTTGCAGCTCCAATAAGGGCCAGACTCATGAGAACAGCAACGAAGCCAGCAGCCATGACTACC
TGCCTTTGGTACGACTGCAAGAGGCTCCAGGCTCCTTCCGCCTGGATGAACCCTTCTGTGCTGC
TGTGAGCATTCCTCAGGAACGCCTGTGTCGAGCCTCTCCCTTTGCTGCACACCGCGCCAGCCTC
AGCCCCACCTCAACCTCATCTCCTTGGGCATTTCTGGGCCCTGGTGTTGGCCAAGGTGACAGTG
CCACAGCCTCCTGCAGTCAACCCTCCAGCTCGGGTTCTGAAGGCCCAGGCCAGGCAGACAGTGG
GAGAGGCTCGGACACCGAGGCGTCGGAAAGAATGGAAGAGAGGGAAAGCTCGGATCTCCGTGGG
CGCACCTGGGCCACAGCCGTGGCCCTGGCATGGTTGGAACACCGCTGCGCAGCTGCCTTCGGCG
AGTGGGAACTAACAGCTTCCAAAGCTGACTGCTGGCTGAGGGCTCAACGCCTGCCAGATGGCCT
TGATCTGACTGCTCTTAAGGCCGCTGCCCGGGGGCTCTTTCTGTTACTGCGGCACTGGGACCAG
AATCTGCAGCTGCACCTGCTGTGTTACAGCCCTTCGAACGTGTAAGGCTGCTTGCAGCTCTGGC
TAGCCACCCCCAACACAGTCACTGCCACCCAGGGCCAGCCTCTTGGTACTGGGAAAGAAAGAAT
GCATTGGTGTCTGCTGTCCTCCATTGCTTCACTCACACACACCCCTCTGAATATTGTTGCCACC
ACAGAAAGTGCCTGCCTGTGCTCTCTTCTCTCTCTGCCCAGTCCATACCCCTCCTATGTGCTCT
GAGCTCTCTATAGGATGCGGAAGAGGAGAGAGCCACAGTCCCAATTCCTATGCAATAAAGTGCC
TCTTAAGACTG

hide sequence

RefSeq Acc Id:

XM_017597974 ⟹ XP_017453463

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,456 - 93,825,446 (-)	NCBI
mRatBN7.2	11	80,306,067 - 80,321,059 (-)	NCBI
Rnor_6.0	11	83,991,793 - 84,006,730 (-)	NCBI

Sequence:

show sequence

AGAGCCGGCGCCGATTACAGGCTGCCTGCTGTCGTGCTCTGGGCCCGGGACTGGGGACCTCTAC
GCCCCGCCGCTGCGCACAGGCCCCACCAGCTGCTTCGGGGCAGGCAGCCCTGAGGAGGAAACGC
TGAGCTGGGAGCAACCAACTGCCCCTCCGGACGTGTTCTCAGGCCCTGCCCGCTGTCCTGCTCC
GTATACCTTCTCTTTCGAGATGCTAGTGACAGGACCATGTCTGTTGGCAGGCCTGGAGAGCCCT
TCTCATGCTCTGCGTGCAGATGCCCTCCCTCACGCCAGTTCTGCAGCAACTATCTGTGTCACCC
TGGCAGAAGGCCACCAGTGTGACCGGGCCTTGGAGATCCTCTTGCACCCCAGTGAGCCCCATCA
GCCACACTTGATGCTGGAGGCTGGCAGCTTGAGCTCAGCAGAATATGAGGCCCAAGTGAGGGCC
CGCCATGACTTTCAGAGGCTGCAGCAAAGAGACAATGATGGGGACCGACAGGTGTGGTTCCTAC
AGCGACGTTTCCATAAGGACATCTTGCTGAACCCTGTGCTGGTGCTGAACTTCTGCCCAGACCT
GAGTGCCAAGCCTGGACACTTGAATGCAGCTACCCGGGAGCTCCTCTTCCTGTTAGATAGCAGT
GGTGCAGTTCACAAGGATGCCATTGTTTTGGCTGTAAAATCCCTCCCAGCCCAGACGCTAGTCA
ACCTGGCCATATTTGGGACATTGGTACAGCCACTCTTCCCAGAGAGCCGGCCTTGCAGTGATGA
CACTGTGCAGCTGATCTGTGAGACCATTGAGACTCTTCAGACTGTGAGTGGCCCCCCTGATATG
CTGGCTGTATTGGATTGGGCCTTAGGGCAGCCCCAGCACAGGGCCCACCCTCGACAGCTGTTCC
TGCTCACTGCTGCCTCACCAACAGTTGCTACTACTCACCAAGCCCTGGAGTTCATGAGGTGGCA
CAGAGGGGCAGCCAGGTGCTTCTCCTTTGCCTTGGCACCTGCCTGCCACCAGCTGCTCAGTGAC
TTGTCTGTCCTCAGCAGGGGGCAGGCTTACTTCCTGAGGCCTGGGGAGAGACTTCAACCTAAGC
TGGTACAGGCTCTGCGGAAGGCACTGGAACCTGCTTTGAGTGACATCTCCGTGGACTGGTTTGT
GCCTGATGCGGTGGAAGCATTGTTGACACCTCGGGAGATCCCAGCACTCTACCCTGGGGACCAG
CTGCTTGGCTACTGCTCACTTTTCAGGGTTGATGGCTTCCGGTCCCGTGCTCTAGGGGGCCAAG
AGCCTGGTTGGCAGAGCTTGGGTGGTTCAGTCTTCCCATCTCCAGAGGAGGTGATATCTGTCAC
CAGCCCTGGCACTGAGCCTACGCACACCACGGAGCCACTGGGAACAGGCACTGTGTCAGCAGAG
CTGTCGAGCCCATGGGCTATAGGAGACTCAGAGCAGACAGGTATGGAAGCTCTGACAGACCCAG
TTACGGACCCGGGACCTAATCTGTCATCAGACACAGCCATTTGGCGGCGCATCTTCCAGTCCTC
ATACATCCGGGAGCAGTATGTGCTTACCCACTGCTCTGCCAGCCCCGAGCCAGGCCCAGGCTCT
ACCTGCAGTAGCGAGTCCCCTGGCTCCCAAGGCCCTGGCTCCCCCCATGGTAGCCTTCCCCTGG
ATCCCCCTTCTCAGCAGGGCTGCCGAAGCCTGACCTGGGTAGAACCTGCAGGCTCCCGCTCCTG
CCCCCTGCCTGTACCCCCGCCATCTCCATTCAAGGTGGGAGCCATGAGCGCTGAAGTGCTGGGC
CGTCGGCAAAGAGCAGCTTTGGCTGGTCGAAGTCTGTCGTCTCCCTCAGGCCGGGCAAACCCAG
TCCCTGGTAGACCCCGGCACCCGTCTCTAGATGCAATACCCGATGGATCAGGCCCTGAGCCAGG
ACAACAGCTGGGTCAGGGCCTCGATGATTCAGGAAACCTGCTATCCCCAGCCCCCTTGGACTGG
GATATGTTGATGGAGCCATCTTTCTTATTCAAGCCCGTGCCACCCAATGGGGAATCAGCTCCTC
CAGCAGAACCGCTGCCTCCTCAGGCTCCACGTTGTCACGTGGTGATCCGGGCCCTCTGTGGGGA
ACAGCCAATGTGCTGGGAGGTGGGTGTTGGGCTGGAGGAACTCTGGGGTCCTGGGGATAGCTCC
CAGCCTGCACCACTTCCGATGAGAGAAGCTGCGTGGGACCAGGCACTTCACCGGCTGACAGCAG
CCTCTGTGGTCCAGGACAACGAACAGCTGGCTCTCCGTGGGAGAGCTGAAACCGCGGCTGAGCA
GGGCAGAGTCAGAAGGTCCTGGCTCAGAGCCATTCAGACAAGCAAGGTCAGCTCGGCCCCATCC
TGCTTTACTTGCCCTGTTGCTGTAGATGCTACCACTAGGGAGGTCTTGCCCGGAGCCCTGCAGG
TGTGGAGTTCAGATCCAGCTGAGTTCTCAGGCGTGTCTGCCTCTCAAGACCATCTAGCTGTTGC
CCCTCTGTCCACAGCAGTCCACTCTAAAGGTGCCTGGGACCTGGACCTAAATGACAACTCCAAG
TCAGCATTGGGGGAGTCCATATCTCCTACTGGAGGTCATCATGGCTTGCCCCACCAGCCTCCAG
CCTCTTCCAGGCTCAGCCTGGGTCATCATCGCAGACTTTGCAGCTCCAATAAGGGCCAGACTCA
TGAGAACAGCAACGAAGCCAGCAGCCATGACTACCTGCCTTTGGTACGACTGCAAGAGGCTCCA
GGCTCCTTCCGCCTGGATGAACCCTTCTGTGCTGCTGTGAGCATTCCTCAGGAACGCCTGTGTC
GAGCCTCTCCCTTTGCTGCACACCGCGCCAGCCTCAGCCCCACCTCAACCTCATCTCCTTGGGC
ATTTCTGGGCCCTGGTGTTGGCCAAGGTGACAGTGCCACAGCCTCCTGCAGTCAACCCTCCAGC
TCGGGTTCTGAAGGCCCAGGCCAGGCAGACAGTGGGAGAGGCTCGGACACCGAGGCGTCGGAAA
GAATGGAAGAGAGGGAAAGCTCGGATCTCCGTGGGCGCACCTGGGCCACAGCCGTGGCCCTGGC
ATGGTTGGAACACCGCTGCGCAGCTGCCTTCGGCGAGTGGGAACTAACAGCTTCCAAAGCTGAC
TGCTGGCTGAGGGCTCAACGCCTGCCAGATGGCCTTGATCTGACTGCTCTTAAGGCCGCTGCCC
GGGGGCTCTTTCTGTTACTGCGGCACTGGGACCAGAATCTGCAGCTGCACCTGCTGTGTTACAG
CCCTTCGAACGTGTAAGGCTGCTTGCAGCTCTGGCTAGCCACCCCCAACACAGTCACTGCCACC
CAGGGCCAGCCTCTTGGTACTGGGAAAGAAAGAATGCATTGGTGTCTGCTGTCCTCCATTGCTT
CACTCACACACACCCCTCTGAATATTGTTGCCACCACAGAAAGTGCCTGCCTGTGCTCTCTTCT
CTCTCTGCCCAGTCCATACCCCTCCTATGTGCTCTGAGCTCTCTATAGGATGCGGAAGAGGAGA
GAGCCACAGTCCCAATTCCTATGCAATAAAGTGCCTCTTAAGACTG

hide sequence

RefSeq Acc Id:

XM_039088279 ⟹ XP_038944207

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,456 - 93,826,845 (-)	NCBI
mRatBN7.2	11	80,306,067 - 80,322,551 (-)	NCBI

RefSeq Acc Id:

XM_039088280 ⟹ XP_038944208

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,456 - 93,826,847 (-)	NCBI
mRatBN7.2	11	80,306,353 - 80,322,552 (-)	NCBI

RefSeq Acc Id:

XM_039088283 ⟹ XP_038944211

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,811,297 - 93,826,930 (-)	NCBI
mRatBN7.2	11	80,306,908 - 80,322,554 (-)	NCBI

RefSeq Acc Id:

XM_039088284 ⟹ XP_038944212

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,814,952 - 93,826,930 (-)	NCBI
mRatBN7.2	11	80,310,572 - 80,322,554 (-)	NCBI

RefSeq Acc Id:

XM_063270477 ⟹ XP_063126547

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,456 - 93,826,853 (-)	NCBI

RefSeq Acc Id:

XM_063270478 ⟹ XP_063126548

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,456 - 93,826,853 (-)	NCBI

RefSeq Acc Id:

XM_063270479 ⟹ XP_063126549

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,456 - 93,826,841 (-)	NCBI

RefSeq Acc Id:

XM_063270480 ⟹ XP_063126550

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,810,456 - 93,826,930 (-)	NCBI

RefSeq Acc Id:

XM_063270481 ⟹ XP_063126551

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,812,770 - 93,826,930 (-)	NCBI

RefSeq Acc Id:

XR_005491021

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,811,152 - 93,826,930 (-)	NCBI
mRatBN7.2	11	80,306,760 - 80,322,554 (-)	NCBI

RefSeq Acc Id:

XR_010055950

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,814,522 - 93,826,930 (-)	NCBI

RefSeq Acc Id:

XR_010055951

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,814,522 - 93,826,930 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001128007	(Get FASTA)	NCBI Sequence Viewer
	NP_001420221	(Get FASTA)	NCBI Sequence Viewer
	NP_001420222	(Get FASTA)	NCBI Sequence Viewer
	XP_006248633	(Get FASTA)	NCBI Sequence Viewer
	XP_017453458	(Get FASTA)	NCBI Sequence Viewer
	XP_017453461	(Get FASTA)	NCBI Sequence Viewer
	XP_017453463	(Get FASTA)	NCBI Sequence Viewer
	XP_038944207	(Get FASTA)	NCBI Sequence Viewer
	XP_038944208	(Get FASTA)	NCBI Sequence Viewer
	XP_038944211	(Get FASTA)	NCBI Sequence Viewer
	XP_038944212	(Get FASTA)	NCBI Sequence Viewer
	XP_063126547	(Get FASTA)	NCBI Sequence Viewer
	XP_063126548	(Get FASTA)	NCBI Sequence Viewer
	XP_063126549	(Get FASTA)	NCBI Sequence Viewer
	XP_063126550	(Get FASTA)	NCBI Sequence Viewer
	XP_063126551	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL78001	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000035500
	ENSRNOP00000035500.7

RefSeq Acc Id:

NP_001128007 ⟸ NM_001134535

- UniProtKB:

D4A7U5 (UniProtKB/TrEMBL), A6JSA6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPGLYCPTSWTPLPLTDSCVRAYAKGPCLSLRARLTYHNPQPQPVDGVFVYPLAEAEVVSGFEA
EAAGRRVSFQLQSRRRLQAACCRALGPGLGTSTPRRCAQGHLVLDLAQARSTLVLPTGLVAADG
AMTVTLCSSRELPSRPDGVMHVALPTVFTPLAQPNLPGSPRSPGLCDDSPTSCFGAGSPEEETL
SWEQPTAPPDVFSGPARCPAPYTFSFEMLVTGPCLLAGLESPSHALRADALPHASSAATICVTL
AEGHQCDRALEILLHPSEPHQPHLMLEAGSLSSAEYEAQVRARHDFQRLQQRDNDGDRQVWFLQ
RRFHKDILLNPVLVLNFCPDLSAKPGHLNAATRELLFLLDSSGAVHKDAIVLAVKSLPAQTLVN
LAIFGTLVQPLFPESRPCSDDTVQLICETIETLQTVSGPPDMLAVLDWALGQPQHRAHPRQLFL
LTAASPTVATTHQALEFMRWHRGAARCFSFALAPACHQLLSDLSVLSRGQAYFLRPGERLQPKL
VQALRKALEPALSDISVDWFVPDAVEALLTPREIPALYPGDQLLGYCSLFRVDGFRSRALGGQE
PGWQSLGGSVFPSPEEVISVTSPGTEPTHTTEPLGTGTVSAELSSPWAIGDSEQTGMEALTDPV
TDPGPNLSSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTCSSESPGSQGPGSPHGSLPLD
PPSQQGCRSLTWVEPAGSRSCPLPVPPPSPFKVGAMSAEVLGRRQRAALAGRSLSSPSGRANPV
PGRPRHPSLDAIPDGSGPEPGQQLGQGLDDSAPLDWDMLMEPSFLFKPVPPNGESAPPAEPLPP
QAPRCHVVIRALCGEQPMCWEVGVGLEELWGPGDSSQPAPLPMREAAWDQALHRLTAASVVQDN
EQLALRGRAETAAEQGRVRRSWLRAIQTSKVSSAPSCFTCPVAVDATTREVLPGALQVWSSDPA
EFSGVSASQDHLAVAPLSTAVHSKGHQGGCSAGAWDLDLNDNSKSALGESISPTGGHHGLPHQP
PASSRLSLGHHRRLCSSNKGQTHENSNEASSHDYLPLVRLQEAPGSFRLDEPFCAAVSIPQERL
CRASPFAAHRASLSPTSTSSPWAFLGPGVGQGDSATASCSQPSSSGSEGPGQADSGRGSDTEAS
ERMEERESSDLRGRTWATAVALAWLEHRCAAAFGEWELTASKADCWLRAQRLPDGLDLTALKAA
ARGLFLLLRHWDQNLQLHLLCYSPSNV

hide sequence

RefSeq Acc Id:	XP_006248633 ⟸ XM_006248571
- Peptide Label:	isoform X5
- UniProtKB:	D4A7U5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLVTGPCLLAGLESPSHALRADALPHASSAATICVTLAEGHQCDRALEILLHPSEPHQPHLMLE AGSLSSAEYEAQVRARHDFQRLQQRDNDGDRQVWFLQRRFHKDILLNPVLVLNFCPDLSAKPGH LNAATRELLFLLDSSGAVHKDAIVLAVKSLPAQTLVNLAIFGTLVQPLFPESRPCSDDTVQLIC ETIETLQTVSGPPDMLAVLDWALGQPQHRAHPRQLFLLTAASPTVATTHQALEFMRWHRGAARC FSFALAPACHQLLSDLSVLSRGQAYFLRPGERLQPKLVQALRKALEPALSDISVDWFVPDAVEA LLTPREIPALYPGDQLLGYCSLFRVDGFRSRALGGQEPGWQSLGGSVFPSPEEVISVTSPGTEP THTTEPLGTGTVSAELSSPWAIGDSEQTGMEALTDPVTDPGPNLSSDTAIWRRIFQSSYIREQY VLTHCSASPEPGPGSTCSSESPGSQGPGSPHGSLPLDPPSQQGCRSLTWVEPAGSRSCPLPVPP PSPFKVGAMSAEVLGRRQRAALAGRSLSSPSGRANPVPGRPRHPSLDAIPDGSGPEPGQQLGQG LDDSGNLLSPAPLDWDMLMEPSFLFKPVPPNGESAPPAEPLPPQAPRCHVVIRALCGEQPMCWE VGVGLEELWGPGDSSQPAPLPMREAAWDQALHRLTAASVVQDNEQLALRGRAETAAEQGRVRRS WLRAIQTSKVSSAPSCFTCPVAVDATTREVLPGALQVWSSDPAEFSGVSASQDHLAVAPLSTAV HSKGAWDLDLNDNSKSALGESISPTGGHHGLPHQPPASSRLSLGHHRRLCSSNKGQTHENSNEA SSHDYLPLVRLQEAPGSFRLDEPFCAAVSIPQERLCRASPFAAHRASLSPTSTSSPWAFLGPGV GQGDSATASCSQPSSSGSEGPGQADSGRGSDTEASERMEERESSDLRGRTWATAVALAWLEHRC AAAFGEWELTASKADCWLRAQRLPDGLDLTALKAAARGLFLLLRHWDQNLQLHLLCYSPSNV hide sequence

RefSeq Acc Id:	XP_017453461 ⟸ XM_017597972
- Peptide Label:	isoform X3
- UniProtKB:	D4A7U5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPGLYCPTSWTPLPLTDSCVRAYAKGPCLSLRARLTYHNPQPQPVDGVFVYPLAEAEVVSGFEA EAAGRRVSFQLQSRRRLQAACCRALGPGLGTSTPRRCAQGHLVLDLAQARSTLVLPTGLVAADG AMTVTLCSSRELPSRPDGVMHVALPTVFTPLAQPNLPGSPRSPGLCDDSPTSCFGAGSPEEETL SWEQPTAPPDVFSGPARCPAPYTFSFEMLVTGPCLLAGLESPSHALRADALPHASSAATICVTL AEGHQCDRALEILLHPSEPHQPHLMLEAGSLSSAEYEAQVRARHDFQRLQQRDNDGDRQVWFLQ RRFHKDILLNPVLVLNFCPDLSAKPGHLNAATRELLFLLDSSGAVHKDAIVLAVKSLPAQTLVN LAIFGTLVQPLFPESRPCSDDTVQLICETIETLQTVSGPPDMLAVLDWALGQPQHRAHPRQLFL LTAASPTVATTHQALEFMRWHRGAARCFSFALAPACHQLLSDLSVLSRGQAYFLRPGERLQPKL VQALRKALEPALSDISVDWFVPDAVEALLTPREIPALYPGDQLLGYCSLFRVDGFRSRALGGQE PGWQSLGGSVFPSPEEVISVTSPGTEPTHTTEPLGTGTVSAELSSPWAIGDSEQTGMEALTDPV TDPGPNLSSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTCSSESPGSQGPGSPHGSLPLD PPSQQGCRSLTWVEPAGSRSCPLPVPPPSPFKVGAMSAEVLGRRQRAALAGRSLSSPSGRANPV PGRPRHPSLDAIPDGSGPEPGQQLGQGLDDSGNLLSPAPLDWDMLMEPSFLFKPVPPNGESAPP AEPLPPQAPRCHVVIRALCGEQPMCWEVGVGLEELWGPGDSSQPAPLPMREAAWDQALHRLTAA SVVQDNEQLALRGRAETAAEQGRVRRSWLRAIQTSKVSSAPSCFTCPVAVDATTREVLPGALQV WSSDPAEFSGVSASQDHLAVAPLSTAVHSKGAWDLDLNDNSKSALGESISPTGGHHGLPHQPPA SSRLSLGHHRRLCSSNKGQTHENSNEASSHDYLPLVRLQEAPGSFRLDEPFCAAVSIPQERLCR ASPFAAHRASLSPTSTSSPWAFLGPGVGQGDSATASCSQPSSSGSEGPGQADSGRGSDTEASER MEERESSDLRGRTWATAVALAWLEHRCAAAFGEWELTASKADCWLRAQRLPDGLDLTALKAAAR GLFLLLRHWDQNLQLHLLCYSPSNV hide sequence

RefSeq Acc Id:	XP_017453458 ⟸ XM_017597969
- Peptide Label:	isoform X1
- UniProtKB:	D4A7U5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPGLYCPTSWTPLPLTDSCVRAYAKGPCLSLRARLTYHNPQPQPVDGVFVYPLAEAEVVSGFEA EAAGRRVSFQLQSRRRLQAACCRALGPGLGTSTPRRCAQGHLVLDLAQARSTLVLPTGLVAADG AMTVTLCSSRELPSRPDGVMHVALPTVFTPLAQPNLPGSPRSPGLCDDRLGLCPTSCFGAGSPE EETLSWEQPTAPPDVFSGPARCPAPYTFSFEMLVTGPCLLAGLESPSHALRADALPHASSAATI CVTLAEGHQCDRALEILLHPSEPHQPHLMLEAGSLSSAEYEAQVRARHDFQRLQQRDNDGDRQV WFLQRRFHKDILLNPVLVLNFCPDLSAKPGHLNAATRELLFLLDSSGAVHKDAIVLAVKSLPAQ TLVNLAIFGTLVQPLFPESRPCSDDTVQLICETIETLQTVSGPPDMLAVLDWALGQPQHRAHPR QLFLLTAASPTVATTHQALEFMRWHRGAARCFSFALAPACHQLLSDLSVLSRGQAYFLRPGERL QPKLVQALRKALEPALSDISVDWFVPDAVEALLTPREIPALYPGDQLLGYCSLFRVDGFRSRAL GGQEPGWQSLGGSVFPSPEEVISVTSPGTEPTHTTEPLGTGTVSAELSSPWAIGDSEQTGMEAL TDPVTDPGPNLSSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTCSSESPGSQGPGSPHGS LPLDPPSQQGCRSLTWVEPAGSRSCPLPVPPPSPFKVGAMSAEVLGRRQRAALAGRSLSSPSGR ANPVPGRPRHPSLDAIPDGSGPEPGQQLGQGLDDSGNLLSPAPLDWDMLMEPSFLFKPVPPNGE SAPPAEPLPPQAPRCHVVIRALCGEQPMCWEVGVGLEELWGPGDSSQPAPLPMREAAWDQALHR LTAASVVQDNEQLALRGRAETAAEQGRVRRSWLRAIQTSKVSSAPSCFTCPVAVDATTREVLPG ALQVWSSDPAEFSGVSASQDHLAVAPLSTAVHSKGAWDLDLNDNSKSALGESISPTGGHHGLPH QPPASSRLSLGHHRRLCSSNKGQTHENSNEASSHDYLPLVRLQEAPGSFRLDEPFCAAVSIPQE RLCRASPFAAHRASLSPTSTSSPWAFLGPGVGQGDSATASCSQPSSSGSEGPGQADSGRGSDTE ASERMEERESSDLRGRTWATAVALAWLEHRCAAAFGEWELTASKADCWLRAQRLPDGLDLTALK AAARGLFLLLRHWDQNLQLHLLCYSPSNV hide sequence

RefSeq Acc Id:	XP_017453463 ⟸ XM_017597974
- Peptide Label:	isoform X5
- UniProtKB:	D4A7U5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLVTGPCLLAGLESPSHALRADALPHASSAATICVTLAEGHQCDRALEILLHPSEPHQPHLMLE AGSLSSAEYEAQVRARHDFQRLQQRDNDGDRQVWFLQRRFHKDILLNPVLVLNFCPDLSAKPGH LNAATRELLFLLDSSGAVHKDAIVLAVKSLPAQTLVNLAIFGTLVQPLFPESRPCSDDTVQLIC ETIETLQTVSGPPDMLAVLDWALGQPQHRAHPRQLFLLTAASPTVATTHQALEFMRWHRGAARC FSFALAPACHQLLSDLSVLSRGQAYFLRPGERLQPKLVQALRKALEPALSDISVDWFVPDAVEA LLTPREIPALYPGDQLLGYCSLFRVDGFRSRALGGQEPGWQSLGGSVFPSPEEVISVTSPGTEP THTTEPLGTGTVSAELSSPWAIGDSEQTGMEALTDPVTDPGPNLSSDTAIWRRIFQSSYIREQY VLTHCSASPEPGPGSTCSSESPGSQGPGSPHGSLPLDPPSQQGCRSLTWVEPAGSRSCPLPVPP PSPFKVGAMSAEVLGRRQRAALAGRSLSSPSGRANPVPGRPRHPSLDAIPDGSGPEPGQQLGQG LDDSGNLLSPAPLDWDMLMEPSFLFKPVPPNGESAPPAEPLPPQAPRCHVVIRALCGEQPMCWE VGVGLEELWGPGDSSQPAPLPMREAAWDQALHRLTAASVVQDNEQLALRGRAETAAEQGRVRRS WLRAIQTSKVSSAPSCFTCPVAVDATTREVLPGALQVWSSDPAEFSGVSASQDHLAVAPLSTAV HSKGAWDLDLNDNSKSALGESISPTGGHHGLPHQPPASSRLSLGHHRRLCSSNKGQTHENSNEA SSHDYLPLVRLQEAPGSFRLDEPFCAAVSIPQERLCRASPFAAHRASLSPTSTSSPWAFLGPGV GQGDSATASCSQPSSSGSEGPGQADSGRGSDTEASERMEERESSDLRGRTWATAVALAWLEHRC AAAFGEWELTASKADCWLRAQRLPDGLDLTALKAAARGLFLLLRHWDQNLQLHLLCYSPSNV hide sequence

Ensembl Acc Id:

ENSRNOP00000035500 ⟸ ENSRNOT00000037612

RefSeq Acc Id:	XP_038944207 ⟸ XM_039088279
- Peptide Label:	isoform X2
- UniProtKB:	D4A7U5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038944208 ⟸ XM_039088280
- Peptide Label:	isoform X3
- UniProtKB:	D4A7U5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038944211 ⟸ XM_039088283
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038944212 ⟸ XM_039088284
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063126550 ⟸ XM_063270480
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063126548 ⟸ XM_063270478
- Peptide Label:	isoform X1
- UniProtKB:	D4A7U5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063126547 ⟸ XM_063270477
- Peptide Label:	isoform X1
- UniProtKB:	D4A7U5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063126549 ⟸ XM_063270479
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063126551 ⟸ XM_063270481
- Peptide Label:	isoform X8

Protein Domains

VIT

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A7U5-F1-model_v2	AlphaFold	D4A7U5	1-1243	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564491	AgrOrtholog
BioCyc Gene	G2FUF-20740	BioCyc
Ensembl Genes	ENSRNOG00000001707	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000037612	ENTREZGENE
	ENSRNOT00000037612.7	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.410	UniProtKB/TrEMBL
InterPro	VIT	UniProtKB/TrEMBL
	VWA_domain-containing	UniProtKB/TrEMBL
	VWF_A	UniProtKB/TrEMBL
	vWFA_dom_sf	UniProtKB/TrEMBL
KEGG Report	rno:303812	UniProtKB/TrEMBL
NCBI Gene	303812	ENTREZGENE
PANTHER	VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5B2	UniProtKB/TrEMBL
	VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5B2-RELATED	UniProtKB/TrEMBL
Pfam	VIT_2	UniProtKB/TrEMBL
	VWA_3	UniProtKB/TrEMBL
PhenoGen	Vwa5b2	PhenoGen
PROSITE	VIT	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000001707	RatGTEx
Superfamily-SCOP	SSF53300	UniProtKB/TrEMBL
UniProt	A6JSA6	ENTREZGENE, UniProtKB/TrEMBL
	D4A7U5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-09-09	Vwa5b2	von Willebrand factor A domain containing 5B2	RGD1564491	RGD1564491	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1564491	RGD1564491	RGD1564491_predicted	RGD1564491 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1564491_predicted	RGD1564491 (predicted)	LOC303812	hypothetical LOC303812	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC303812	hypothetical LOC303812			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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