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Gene: Epcip (exosomal polycystin 1 interacting protein) Rattus norvegicus

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Symbol:

Epcip

Name:

exosomal polycystin 1 interacting protein

RGD ID:

1562726

Description:

Predicted to enable identical protein binding activity. Predicted to be involved in mitocytosis. Predicted to be located in extracellular exosome. Predicted to be active in migrasome. Orthologous to human EPCIP (exosomal polycystin 1 interacting protein); INTERACTS WITH 1-naphthyl isothiocyanate; acetamide; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

C11h21orf62; hypothetical protein LOC498060; LOC498060; polycystin-1-interacting protein 1; RGD1562726; similar to human chromosome 21 open reading frame 62; similar to Putative protein C21orf62 homolog; uncharacterized protein C21orf62 homolog; uncharacterized protein LOC498060

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	43,793,924 - 43,811,388 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	11	43,793,578 - 43,811,682 (-)	Ensembl				GRCr8
mRatBN7.2	11	30,307,842 - 30,325,829 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	30,310,350 - 30,325,439 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	11	38,994,695 - 39,012,149 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	31,666,118 - 31,683,572 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	30,840,545 - 30,857,999 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	31,220,566 - 31,238,495 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	31,223,074 - 31,238,026 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	11	34,831,057 - 34,848,558 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	11	31,039,805 - 31,055,914 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	11	29,976,897 - 29,991,831 (-)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1-naphthyl isothiocyanate (EXP)

acetamide (EXP)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

Butylbenzyl phthalate (ISO)

cadmium dichloride (EXP,ISO)

fenvalerate (EXP)

fipronil (ISO)

gentamycin (EXP)

Moniliformin (ISO)

N,N-diethyl-m-toluamide (ISO)

paracetamol (EXP)

propanal (ISO)

rotenone (ISO)

silicon dioxide (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mitocytosis (IBA,IEA,ISO)

Cellular Component

extracellular exosome (IEA,ISO)

migrasome (IBA,IEA,ISO)

Molecular Function

identical protein binding (IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Epcip
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	43,793,924 - 43,811,388 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	11	43,793,578 - 43,811,682 (-)	Ensembl				GRCr8
mRatBN7.2	11	30,307,842 - 30,325,829 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	30,310,350 - 30,325,439 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	11	38,994,695 - 39,012,149 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	31,666,118 - 31,683,572 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	30,840,545 - 30,857,999 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	31,220,566 - 31,238,495 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	31,223,074 - 31,238,026 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	11	34,831,057 - 34,848,558 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	11	31,039,805 - 31,055,914 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	11	29,976,897 - 29,991,831 (-)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

EPCIP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	32,790,673 - 32,813,703 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	21	32,790,673 - 32,813,743 (-)	Ensembl			hg38	GRCh38
GRCh37	21	34,162,984 - 34,186,013 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	33,084,855 - 33,107,876 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	21	33,087,745 - 33,107,829	NCBI
Celera	21	19,346,641 - 19,369,711 (-)	NCBI		Celera
Cytogenetic Map	21	q22.11	NCBI
HuRef	21	19,572,320 - 19,595,326 (-)	NCBI		HuRef
CHM1_1	21	33,725,128 - 33,748,245 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	21	31,156,897 - 31,179,935 (-)	NCBI		T2T-CHM13v2.0

Epcip
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	90,841,534 - 90,866,040 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	90,850,823 - 90,892,010 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	16	91,054,877 - 91,130,103 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	91,053,935 - 91,095,122 (-)	Ensembl			mm10	GRCm38
MGSCv37	16	91,054,180 - 91,069,390 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	16	90,942,794 - 90,958,004 (-)	NCBI		MGSCv36	mm8
Celera	16	92,135,605 - 92,150,807 (-)	NCBI		Celera
Cytogenetic Map	16	C3.3	NCBI
cM Map	16	52.35	NCBI

Epcip
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955407	32,229,108 - 32,249,097 (-)	NCBI	ChiLan1.0	ChiLan1.0

EPCIP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	22	28,903,874 - 28,924,829 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	21	23,763,834 - 23,784,820 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	21	19,153,434 - 19,174,752 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	21	32,529,572 - 32,552,595 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	21	32,532,656 - 32,552,541 (-)	Ensembl			panPan2	panpan1.1

EPCIP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	31	27,457,591 - 27,496,423 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	31	27,460,093 - 27,460,752 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	31	27,453,873 - 27,454,532 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	31	27,656,918 - 27,695,885 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	31	27,659,383 - 27,660,042 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	31	27,525,390 - 27,526,049 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	31	27,537,370 - 27,538,029 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	31	28,044,739 - 28,045,398 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Epcip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	28,038,572 - 28,055,382 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936500	9,427,898 - 9,428,617 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936500	9,412,507 - 9,429,250 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EPCIP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	196,387,383 - 196,404,714 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	13	196,387,380 - 196,404,856 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	206,399,336 - 206,416,823 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EPCIP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	59,346,296 - 59,367,721 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	59,366,479 - 59,367,135 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666071	1,886,621 - 1,907,779 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Epcip
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624745	21,034,962 - 21,035,675 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624745	21,031,717 - 21,064,616 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Epcip
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	53,521,967 - 53,535,473 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Epcip
45 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	163
Count of miRNA genes:	122
Interacting mature miRNAs:	146
Transcripts:	ENSRNOT00000032366
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	22524746	82951192	Rat
1598841	Memor7	Memory QTL 7			exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	11	33306008	78306008	Rat
1598842	Glom10	Glomerulus QTL 10	3.4		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	3818154	48818154	Rat
1598811	Bp291	Blood pressure QTL 291	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	33306008	78306008	Rat
634339	Niddm50	Non-insulin dependent diabetes mellitus QTL 50	3.32		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	11	10806125	55806125	Rat
634341	Bw121	Body weight QTL 121	3.56		abdominal fat pad mass (VT:1000711)	abdominal fat pad weight (CMO:0000088)	11	35323199	55805892	Rat
8694376	Bw156	Body weight QTL 156	2.25	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	36749459	81749459	Rat
10755497	Bp388	Blood pressure QTL 388	2.76		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	32943067	89836615	Rat
724517	Uae18	Urinary albumin excretion QTL 18	3.7		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	29958996	57754989	Rat
1300130	Rf20	Renal function QTL 20	4.44		kidney glomerulus integrity trait (VT:0010546)	kidney glomerulus diameter (CMO:0001166)	11	31915469	76915469	Rat
2290451	Scl58	Serum cholesterol level QTL 58	3.48		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	11	26318031	55806125	Rat
10058952	Gmadr6	Adrenal mass QTL 6	2.29	0.0072	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	36428416	81428416	Rat
1600394	Edcs1	Endometrial carcinoma susceptibility QTL1	2.9	0.04	uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	11	12823152	57823152	Rat
1558659	Tescar1	Testicular tumor resistance QTL 1	3.9		testis integrity trait (VT:0010572)	percentage of study population developing testis tumors during a period of time (CMO:0001261)	11	34618760	79618760	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	20193549	96351019	Rat
9589032	Epfw10	Epididymal fat weight QTL 10	9.29	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	11	36749459	81749459	Rat
9590313	Scort20	Serum corticosterone level QTL 20	6.51	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	11	36749459	81749459	Rat
8694424	Bw162	Body weight QTL 162	3.8	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	36749459	81749459	Rat
631510	Spl2	Serum phospholipid level QTL 2	4.1		blood phospholipid amount (VT:0006084)	serum phospholipid level (CMO:0001171)	11	27556685	72556685	Rat

Markers in Region

RH137379

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	30,311,400 - 30,311,606 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	31,224,125 - 31,224,330	NCBI	Rnor6.0
Rnor_5.0	11	34,834,616 - 34,834,821	UniSTS	Rnor5.0
RGSC_v3.4	11	31,040,856 - 31,041,061	UniSTS	RGSC3.4
Celera	11	29,977,948 - 29,978,153	UniSTS
RH 3.4 Map	11	180.4	UniSTS
Cytogenetic Map	11	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
15	9	66	164	84	83	52	52	52	6	305	149	11	143	83	94	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001109052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768590	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC120732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000032366 ⟹ ENSRNOP00000060658

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	43,793,691 - 43,811,466 (-)	Ensembl
mRatBN7.2 Ensembl	11	30,310,350 - 30,325,304 (-)	Ensembl
Rnor_6.0 Ensembl	11	31,223,074 - 31,238,026 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106623 ⟹ ENSRNOP00000084873

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	43,793,849 - 43,807,302 (-)	Ensembl
mRatBN7.2 Ensembl	11	30,310,363 - 30,319,606 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115117 ⟹ ENSRNOP00000086960

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	43,793,804 - 43,807,748 (-)	Ensembl
mRatBN7.2 Ensembl	11	30,310,363 - 30,320,416 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116580 ⟹ ENSRNOP00000089993

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	43,797,235 - 43,799,279 (-)	Ensembl
mRatBN7.2 Ensembl	11	30,311,195 - 30,324,009 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116851 ⟹ ENSRNOP00000094399

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	43,793,578 - 43,811,682 (-)	Ensembl
mRatBN7.2 Ensembl	11	30,310,363 - 30,325,439 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000138270 ⟹ ENSRNOP00000111012

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	43,797,828 - 43,810,080 (-)	Ensembl

RefSeq Acc Id:

NM_001109052 ⟹ NP_001102522

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	43,793,924 - 43,811,388 (-)	NCBI
mRatBN7.2	11	30,307,842 - 30,325,309 (-)	NCBI
Rnor_6.0	11	31,223,074 - 31,238,026 (-)	NCBI
Rnor_5.0	11	34,831,057 - 34,848,558 (-)	NCBI
RGSC_v3.4	11	31,039,805 - 31,055,914 (-)	RGD
Celera	11	29,976,897 - 29,991,831 (-)	RGD

Sequence:

show sequence

CCACCCGGCTTGCAGATTAAAGCAGCTGTCAGGCCAGGGGGAAGGCACGGTGGCCAGGGAAGAG
CCCCGAGGTCTACAGATTGGGCAGACAGGCCCTGCCGTGGGGCCGCAAGATCCCCCTCGCCGGA
ACCAATCAGAATCCTACAAGAACTGCATCAATATCCTTGGTGGCCTAATGATCCCTTAGTTGGC
TCTGCCGGGAAAGGGTCCCCACCATCTCTAACTTCGCCACACTGCAGCCCCAGCTTCTGAGACT
TGAACTCAGAGAGGAACCACGGATGAGCATGGGGCATGTTTATGTGCAGAGTCGGTGGGAGCGC
ATTCTCTCAGTGTTTGCTGAGATTTCAGGGGTAAGGAGGTGACTTGCAACGGACTGGCTCAGGA
AGGAGAAATAGGAGCACACTAGTCCACACCGGGCCACAATGACAGCGCCTTCCAGCTTCTGCCT
TCTGCTAGGAGCGCTAGGTATCTTTGCCCTTGGCCGCTTCGCGGAGGGTCAGAGCAGGACACTG
ATTTTCACAAAGGGAAACACCATTCGTAACTGCAGCTGCCCCGCAGACATCCGGGACTGTGACT
ACAGTTTGGCCAACCTGATGTGCAGCTGTAAGTCTGTCCTGCCTCTGGCCATGGAGCAAACCAG
CTATCATGGCCACCTCACCATCTGGTTCACAGATATATCCACGTTGGGCCACCTGCTGAAGTTC
ACTCTGGTCCAAGACTTGAAGCTTTCCCTGTGTGGTTCCAACACCTTCCCCACCAAGTACCTGG
CTGTCTGTGGCCTGAAGAGGCTTCACATCAATACTGAGGCCAAGCATCCCTCCGGGGAGCAGAG
CATACTCATCCACAACGGGAGGGAAGGCAGTTCCTTGTACAAGGGCTGGCAAACGCGTGTGTTC
ATCTCACTCTTAGACGTGGCTCTTTTCAACAGAGACTCTTCTCTAAAGTCATATAGTATTGATG
ACATTTCTAGCCTCACCGGTGACTTTCCTGACTTTTCTTACTTTATAACTTTCCCAGTGCCAAA
CAACCGAAGCTACCTTGTCACCGTTATTTATTAGCATCCTGTGTCCATCCACCAGGACCTCTGA
GAAAATAAATGGAGCCTCTGAGCAAGGCGTCTGGGAATGCGGTCATGAGATAGCTGTCTCTGTT
CCCTCTCTGAGCCTCCATCTACAGCAAACACACACCAGAGAGCAGCCGGTTCCACTTTCACTGT
TCCACTTTCAATCTAAGAGCAACCTGACCCCTGAACTATGTCCCAAGGGCCAGCTAGAAGCTTG
GTCTTTGCAGCTGGTAGCCTGTGGAGAGCTGTCAGGTTAGAAGGGGATCGGGGAGTGCATACCA
GAGACTGTTTAGTGGAGCTCGGTATACTCATGGCCCCAAGGAAGAGATTTTTCTTTCAGAATGC
AGTAATTCTTCCTTATGTGTGTGTGTACATTCCAAGACTCTGAGGACACCTGAATGAGCAAACA
ATACTAGACCCTATGCATACTGTGTTTTCCCTATAGAGACTTTTGATACAGTCTAACTTATAAG
TTAAGATCACTGTGGGATTAAAACCTGTAACACACTGTAAGAAAGTTGTGCCAATATGTGCTTG
CTCTTCCCGTGGCGATGGCGCTCTTTGGCATAGCCACATTTCCAGCGTTGCTACTTTTTACATG
ATGGCTATCATGGAATAAAATATATGTTTATTGGATCATAACATGGTCAGTCTGACAACAGAGA
CCAGTCACTAAGGGGCTCATGGGTGGTAGTGTATTTAGTGTTTATGAACAGGCATGGGACAGGC
ATGTCCCATGGGACAGGTTCGTGTCCCAGGTAGAATCAGGCAGGACCACATTCTTCACACTCCC
TAGAACAACTTGAAGTTTAAAACTTCTGATTTATAAATGAAACTGCACATTGGGGACCATGGTA
CCCCTTCTCTTTTTCTTTTCTTTTTCATTTTGTGACATGGTCTGGAATTGTGATTCAAAAATGA
CAGATTTCAGAAGTCTGGGGACCTAAATTCCTCTAAACGACAGGTTTGCCCAGACTGATAGTTT
CCAGATAGTTGTGAAGAGCAAATGCATTGAGAAGTTGGAATTTAAAAGTGAATTTATGGACTTG
GCAAGGTTATGTGGGACTATAACACTACCTGAAGGCATTGGGGTTCCGAGAGATGGGCACAGGA
GTGAAAACACACGCCCATACATTTAGCCTCAAATTTATGCACGGAGTACTGCTCTGTGGGGAAG
TTCTTTTCTGGTCTTTCTTCACTTTCACAGAGTAGCCGGCAAGGCTCTCCTGGGCCTTCCCTTC
CCTTTCCTCTGCTCTATTCCAGTGTCTTCATTCCCTCTGTCCCCGACTCCTATGTCTTGTTATT
GCTCCCCACCCTTCTCCCCTCTTGCTCCTGATTCAGGACTTAGATTGCTGTCAGCAGACTATTA
AGCCACACAGGGGGCAAGCCGGGGAATCTAACAATCTCTTCAAACTTGGTGTTCAAATTTCAAA
GAGTTCATTTTAAAATGAAATTTTGGTCCTTATTCCTTTTGGAATTTTAAGATGAGAAAGTTAA
AGATACTTCATAGCAGGTAGTTAACACAAAATTGTACTAGACATGTTGATAAAAGGAACCAAAG
CAAGTATTTAAAAAACGATTTATTAAATTGTTCACCATTACATAAAGGAACGTTCCCCCATAAT
AAAGACCAAATTTAGCATT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001102522	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM10709	(Get FASTA)	NCBI Sequence Viewer
	EDM10710	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000060658.1
	ENSRNOP00000084873.1
	ENSRNOP00000086960.1
	ENSRNOP00000089993.1
	ENSRNOP00000094399
	ENSRNOP00000094399.1
	ENSRNOP00000111012.1

RefSeq Acc Id:	NP_001102522 ⟸ NM_001109052
- Peptide Label:	precursor
- UniProtKB:	D3ZJP2 (UniProtKB/TrEMBL), A6JLE4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAPSSFCLLLGALGIFALGRFAEGQSRTLIFTKGNTIRNCSCPADIRDCDYSLANLMCSCKSV LPLAMEQTSYHGHLTIWFTDISTLGHLLKFTLVQDLKLSLCGSNTFPTKYLAVCGLKRLHINTE AKHPSGEQSILIHNGREGSSLYKGWQTRVFISLLDVALFNRDSSLKSYSIDDISSLTGDFPDFS YFITFPVPNNRSYLVTVIY hide sequence

Ensembl Acc Id:

ENSRNOP00000060658 ⟸ ENSRNOT00000032366

Ensembl Acc Id:

ENSRNOP00000086960 ⟸ ENSRNOT00000115117

Ensembl Acc Id:

ENSRNOP00000089993 ⟸ ENSRNOT00000116580

Ensembl Acc Id:

ENSRNOP00000084873 ⟸ ENSRNOT00000106623

Ensembl Acc Id:

ENSRNOP00000094399 ⟸ ENSRNOT00000116851

Ensembl Acc Id:

ENSRNOP00000111012 ⟸ ENSRNOT00000138270

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZJP2-F1-model_v2	AlphaFold	D3ZJP2	1-211	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1562726	AgrOrtholog
BioCyc Gene	G2FUF-21921	BioCyc
Ensembl Genes	ENSRNOG00000028670	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000032366.5	UniProtKB/TrEMBL
	ENSRNOT00000106623.2	UniProtKB/TrEMBL
	ENSRNOT00000115117.2	UniProtKB/TrEMBL
	ENSRNOT00000116580.2	UniProtKB/TrEMBL
	ENSRNOT00000116851	ENTREZGENE
	ENSRNOT00000116851.2	UniProtKB/TrEMBL
	ENSRNOT00000138270.1	UniProtKB/TrEMBL
InterPro	DUF4571	UniProtKB/TrEMBL
KEGG Report	rno:498060	UniProtKB/TrEMBL
NCBI Gene	498060	ENTREZGENE
PANTHER	PTHR35658	UniProtKB/TrEMBL
	RCG58666, ISOFORM CRA_A	UniProtKB/TrEMBL
Pfam	DUF4571	UniProtKB/TrEMBL
PhenoGen	Epcip	PhenoGen
RatGTEx	ENSRNOG00000028670	RatGTEx
UniProt	A6JLE4	ENTREZGENE, UniProtKB/TrEMBL
	D3ZJP2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-12-29	Epcip	exosomal polycystin 1 interacting protein	C11h21orf62	similar to human chromosome 21 open reading frame 62	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2023-09-19	C11h21orf62	similar to human chromosome 21 open reading frame 62	RGD1562726	similar to Putative protein C21orf62 homolog	Symbol and Name Changed	1299863	APPROVED
2008-04-30	RGD1562726	similar to Putative protein C21orf62 homolog	RGD1562726_predicted	similar to Putative protein C21orf62 homolog (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1562726_predicted	similar to Putative protein C21orf62 homolog (predicted)	LOC498060	similar to Putative protein C21orf62 homolog	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC498060	similar to Putative protein C21orf62 homolog			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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