Gene: Zbed5 (zinc finger BED-type containing 5) Rattus norvegicus
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Symbol:
Zbed5
Name:
zinc finger BED-type containing 5
RGD ID:
1559988
Description:
Orthologous to human ZBED5 (zinc finger BED-type containing 5); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3-chloropropane-1,2-diol.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
Chchd2l2; coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 2; coiled-coil-helix-coiled-coil-helix domain-containing protein 2; coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 2; LOC288622; RGD1559988; SCAN domain containing 3; Scand3; similar to RIKEN cDNA 2410018M08; zinc finger BED domain-containing protein 5; zinc finger, BED-type containing 5
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Related Pseudogenes:
Chchd2l2-ps1
Chchd2l2-ps2
Chchd2l2-ps3
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 32,443,687 - 32,449,817 (-) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 12 32,443,763 - 32,449,817 (-) Ensembl GRCr8 mRatBN7.2 12 26,807,652 - 26,813,706 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 26,807,600 - 26,813,664 (-) Ensembl mRatBN7.2 UTH_Rnor_SHR_Utx 12 27,954,944 - 27,960,469 (-) NCBI UTH_Rnor_SHR_Utx UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 12 28,565,481 - 28,571,006 (-) NCBI UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 12 27,626,976 - 27,632,501 (-) NCBI UTH_Rnor_WKY_Bbb_1.0 UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 12 30,308,469 - 30,314,520 (-) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 30,308,469 - 30,314,519 (-) Ensembl rn6 Rnor6.0 Rnor_5.0 12 32,253,295 - 32,259,362 (-) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 12 27,855,832 - 27,861,887 (-) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera 12 28,521,413 - 28,527,467 (-) NCBI Celera Cytogenetic Map 12 q13 NCBI
JBrowse:
Only show annotations with direct experimental evidence (0 objects hidden)
Zbed5 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of ZBED5 mRNA CTD PMID:33387578 Zbed5 Rat 2,3,7,8-Tetrachlorodibenzofuran increases expression EXP 6480464 2,3,7,8-tetrachlorodibenzofuran results in increased expression of ZBED5 mRNA CTD PMID:32109520 Zbed5 Rat 3-chloropropane-1,2-diol increases expression EXP 6480464 alpha-Chlorohydrin results in increased expression of ZBED5 protein CTD PMID:34915118 Zbed5 Rat 4,4'-sulfonyldiphenol multiple interactions EXP 6480464 [bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ... CTD PMID:36041667 Zbed5 Rat 4-hydroxyphenyl retinamide increases expression ISO Zbed5 (Mus musculus) 6480464 Fenretinide results in increased expression of ZBED5 mRNA CTD PMID:28973697 Zbed5 Rat 6-propyl-2-thiouracil increases expression EXP 6480464 Propylthiouracil results in increased expression of ZBED5 mRNA CTD PMID:24780913 Zbed5 Rat acetamide decreases expression EXP 6480464 acetamide results in decreased expression of ZBED5 mRNA CTD PMID:31881176 Zbed5 Rat aflatoxin B1 decreases methylation ISO ZBED5 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased methylation of ZBED5 gene CTD PMID:27153756 Zbed5 Rat all-trans-retinoic acid increases expression ISO ZBED5 (Homo sapiens) 6480464 Tretinoin results in increased expression of ZBED5 mRNA CTD PMID:23724009 Zbed5 Rat alpha-Zearalanol multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of ZBED5 mRNA; [Zeranol co-treated with more ... CTD PMID:35163327 Zbed5 Rat amphetamine increases expression EXP 6480464 Amphetamine results in increased expression of ZBED5 mRNA CTD PMID:30779732 Zbed5 Rat aristolochic acid A decreases expression ISO ZBED5 (Homo sapiens) 6480464 aristolochic acid I results in decreased expression of ZBED5 mRNA CTD PMID:33212167 Zbed5 Rat arsane multiple interactions ISO ZBED5 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Zbed5 Rat arsenic atom multiple interactions ISO ZBED5 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Zbed5 Rat arsenous acid decreases expression ISO Zbed5 (Mus musculus) 6480464 Arsenic Trioxide results in decreased expression of FAM200B mRNA CTD PMID:39716349 Zbed5 Rat atrazine decreases expression ISO ZBED5 (Homo sapiens) 6480464 Atrazine results in decreased expression of ZBED5 mRNA CTD PMID:22378314 Zbed5 Rat benzo[a]pyrene diol epoxide I decreases expression ISO ZBED5 (Homo sapiens) 6480464 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide results in decreased expression of ZBED5 mRNA CTD PMID:19150397 Zbed5 Rat bis(2-ethylhexyl) phthalate multiple interactions EXP 6480464 [bisphenol A co-treated with Diethylhexyl Phthalate co-treated with Dibutyl Phthalate] affects the methylation of ZBED5 more ... CTD PMID:23359474 Zbed5 Rat bis(2-ethylhexyl) phthalate increases expression ISO Zbed5 (Mus musculus) 6480464 Diethylhexyl Phthalate results in increased expression of ZBED5 mRNA CTD PMID:19850644|PMID:34319233 Zbed5 Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of ZBED5 mRNA CTD PMID:30816183|PMID:32528016 Zbed5 Rat bisphenol A increases expression ISO Zbed5 (Mus musculus) 6480464 bisphenol A results in increased expression of ZBED5 mRNA CTD PMID:33221593|PMID:38074096 Zbed5 Rat bisphenol A decreases expression ISO ZBED5 (Homo sapiens) 6480464 bisphenol A results in decreased expression of ZBED5 mRNA CTD PMID:25047013 Zbed5 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of ZBED5 mRNA CTD PMID:25181051 Zbed5 Rat bisphenol A multiple interactions EXP 6480464 [bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ... CTD PMID:23359474|PMID:36041667 Zbed5 Rat bisphenol F multiple interactions EXP 6480464 [bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ... CTD PMID:36041667 Zbed5 Rat bisphenol F decreases expression ISO Zbed5 (Mus musculus) 6480464 bisphenol F results in decreased expression of ZBED5 mRNA CTD PMID:38685157 Zbed5 Rat cadmium dichloride decreases expression ISO ZBED5 (Homo sapiens) 6480464 Cadmium Chloride results in decreased expression of ZBED5 mRNA CTD PMID:38568856 Zbed5 Rat carbamazepine affects expression ISO ZBED5 (Homo sapiens) 6480464 Carbamazepine affects the expression of ZBED5 mRNA CTD PMID:25979313 Zbed5 Rat cobalt dichloride decreases expression ISO ZBED5 (Homo sapiens) 6480464 cobaltous chloride results in decreased expression of ZBED5 mRNA CTD PMID:19376846 Zbed5 Rat copper(II) sulfate decreases expression ISO ZBED5 (Homo sapiens) 6480464 Copper Sulfate results in decreased expression of ZBED5 mRNA CTD PMID:19549813 Zbed5 Rat Cuprizon increases expression EXP 6480464 Cuprizone results in increased expression of ZBED5 mRNA CTD PMID:26577399 Zbed5 Rat cyclosporin A decreases expression ISO ZBED5 (Homo sapiens) 6480464 Cyclosporine results in decreased expression of ZBED5 mRNA CTD PMID:25562108 Zbed5 Rat diarsenic trioxide decreases expression ISO Zbed5 (Mus musculus) 6480464 Arsenic Trioxide results in decreased expression of FAM200B mRNA CTD PMID:39716349 Zbed5 Rat Dibutyl phosphate affects expression ISO ZBED5 (Homo sapiens) 6480464 di-n-butylphosphoric acid affects the expression of ZBED5 mRNA CTD PMID:37042841 Zbed5 Rat dibutyl phthalate multiple interactions EXP 6480464 [bisphenol A co-treated with Diethylhexyl Phthalate co-treated with Dibutyl Phthalate] affects the methylation of ZBED5 more ... CTD PMID:23359474 Zbed5 Rat dichloroacetic acid increases expression ISO Zbed5 (Mus musculus) 6480464 Dichloroacetic Acid results in increased expression of ZBED5 mRNA CTD PMID:28962523 Zbed5 Rat dicrotophos decreases expression ISO ZBED5 (Homo sapiens) 6480464 dicrotophos results in decreased expression of ZBED5 mRNA CTD PMID:28302478 Zbed5 Rat dimethyl sulfoxide increases expression ISO ZBED5 (Homo sapiens) 6480464 Dimethyl Sulfoxide results in increased expression of ZBED5 mRNA CTD PMID:39709020 Zbed5 Rat doxorubicin decreases expression ISO ZBED5 (Homo sapiens) 6480464 Doxorubicin results in decreased expression of ZBED5 mRNA CTD PMID:29803840 Zbed5 Rat endosulfan increases expression EXP 6480464 Endosulfan results in increased expression of ZBED5 mRNA CTD PMID:29391264 Zbed5 Rat ethanol increases expression ISO Zbed5 (Mus musculus) 6480464 Ethanol results in increased expression of ZBED5 mRNA CTD PMID:30319688 Zbed5 Rat fluoranthene multiple interactions ISO Zbed5 (Mus musculus) 6480464 [1-methylanthracene co-treated with fluoranthene] results in increased expression of ZBED5 mRNA CTD PMID:28329830 Zbed5 Rat formaldehyde decreases expression ISO ZBED5 (Homo sapiens) 6480464 Formaldehyde results in decreased expression of ZBED5 mRNA CTD PMID:20655997 Zbed5 Rat FR900359 decreases phosphorylation ISO ZBED5 (Homo sapiens) 6480464 FR900359 results in decreased phosphorylation of ZBED5 protein CTD PMID:37730182 Zbed5 Rat gentamycin increases expression EXP 6480464 Gentamicins results in increased expression of ZBED5 mRNA CTD PMID:33387578 Zbed5 Rat hydrogen peroxide affects expression ISO ZBED5 (Homo sapiens) 6480464 Hydrogen Peroxide affects the expression of ZBED5 mRNA CTD PMID:20044591 Zbed5 Rat ketamine decreases expression EXP 6480464 Ketamine results in decreased expression of ZBED5 mRNA CTD PMID:20080153 Zbed5 Rat lipopolysaccharide decreases expression ISO Zbed5 (Mus musculus) 6480464 Lipopolysaccharides results in decreased expression of ZBED5 mRNA CTD PMID:25890327 Zbed5 Rat manganese atom multiple interactions ISO ZBED5 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Zbed5 Rat manganese(0) multiple interactions ISO ZBED5 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Zbed5 Rat manganese(II) chloride increases expression EXP 6480464 manganese chloride results in increased expression of ZBED5 mRNA CTD PMID:28801915 Zbed5 Rat manganese(II) chloride multiple interactions ISO ZBED5 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Zbed5 Rat Monobutylphthalate decreases expression ISO Zbed5 (Mus musculus) 6480464 monobutyl phthalate results in decreased expression of ZBED5 mRNA CTD PMID:35278568 Zbed5 Rat N-methyl-4-phenylpyridinium increases expression ISO Zbed5 (Mus musculus) 6480464 1-Methyl-4-phenylpyridinium results in increased expression of ZBED5 protein CTD PMID:26558463 Zbed5 Rat naled affects expression ISO ZBED5 (Homo sapiens) 6480464 Naled affects the expression of ZBED5 mRNA CTD PMID:40434365 Zbed5 Rat ozone multiple interactions ISO ZBED5 (Homo sapiens) 6480464 [Air Pollutants results in increased abundance of Ozone] which affects the expression of ZBED5 mRNA CTD PMID:35430440 Zbed5 Rat paracetamol decreases expression ISO ZBED5 (Homo sapiens) 6480464 Acetaminophen results in decreased expression of ZBED5 mRNA CTD PMID:21420995 Zbed5 Rat perfluorooctanoic acid multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of ZBED5 mRNA; [Zeranol co-treated with more ... CTD PMID:35163327 Zbed5 Rat pirinixic acid increases expression ISO Zbed5 (Mus musculus) 6480464 pirinixic acid results in increased expression of ZBED5 mRNA CTD PMID:23811191 Zbed5 Rat quercetin decreases expression ISO ZBED5 (Homo sapiens) 6480464 Quercetin results in decreased expression of ZBED5 mRNA CTD PMID:21632981 Zbed5 Rat silver atom decreases expression ISO ZBED5 (Homo sapiens) 6480464 Silver results in decreased expression of ZBED5 mRNA CTD PMID:26014281 Zbed5 Rat silver(0) decreases expression ISO ZBED5 (Homo sapiens) 6480464 Silver results in decreased expression of ZBED5 mRNA CTD PMID:26014281 Zbed5 Rat sodium arsenite decreases expression ISO ZBED5 (Homo sapiens) 6480464 sodium arsenite results in decreased expression of ZBED5 mRNA CTD PMID:38568856 Zbed5 Rat sodium arsenite multiple interactions ISO ZBED5 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Zbed5 Rat sodium fluoride increases expression ISO Zbed5 (Mus musculus) 6480464 Sodium Fluoride results in increased expression of ZBED5 protein CTD PMID:28918527 Zbed5 Rat tetrachloromethane decreases expression EXP 6480464 Carbon Tetrachloride results in decreased expression of ZBED5 mRNA CTD PMID:33387578 Zbed5 Rat topotecan affects response to substance ISO ZBED5 (Homo sapiens) 6480464 ZBED5 protein affects the susceptibility to Topotecan CTD PMID:16217747 Zbed5 Rat trichostatin A affects expression ISO ZBED5 (Homo sapiens) 6480464 trichostatin A affects the expression of ZBED5 mRNA CTD PMID:28542535 Zbed5 Rat triphenyl phosphate affects expression ISO ZBED5 (Homo sapiens) 6480464 triphenyl phosphate affects the expression of ZBED5 mRNA CTD PMID:37042841 Zbed5 Rat triptonide increases expression ISO Zbed5 (Mus musculus) 6480464 triptonide results in increased expression of ZBED5 mRNA CTD PMID:33045310 Zbed5 Rat trovafloxacin increases expression ISO Zbed5 (Mus musculus) 6480464 trovafloxacin results in increased expression of ZBED5 mRNA CTD PMID:35537566 Zbed5 Rat urethane decreases expression ISO ZBED5 (Homo sapiens) 6480464 Urethane results in decreased expression of ZBED5 mRNA CTD PMID:28818685 Zbed5 Rat valproic acid decreases expression ISO ZBED5 (Homo sapiens) 6480464 Valproic Acid results in decreased expression of ZBED5 mRNA CTD PMID:23179753|PMID:27188386 Zbed5 Rat valproic acid affects expression ISO ZBED5 (Homo sapiens) 6480464 Valproic Acid affects the expression of ZBED5 mRNA CTD PMID:25979313
2,3,7,8-tetrachlorodibenzodioxine (EXP) 2,3,7,8-Tetrachlorodibenzofuran (EXP) 3-chloropropane-1,2-diol (EXP) 4,4'-sulfonyldiphenol (EXP) 4-hydroxyphenyl retinamide (ISO) 6-propyl-2-thiouracil (EXP) acetamide (EXP) aflatoxin B1 (ISO) all-trans-retinoic acid (ISO) alpha-Zearalanol (EXP) amphetamine (EXP) aristolochic acid A (ISO) arsane (ISO) arsenic atom (ISO) arsenous acid (ISO) atrazine (ISO) benzo[a]pyrene diol epoxide I (ISO) bis(2-ethylhexyl) phthalate (EXP,ISO) bisphenol A (EXP,ISO) bisphenol F (EXP,ISO) cadmium dichloride (ISO) carbamazepine (ISO)
References
Additional References at PubMed
Genomics
Comparative Map Data
Zbed5 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 32,443,687 - 32,449,817 (-) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 12 32,443,763 - 32,449,817 (-) Ensembl GRCr8 mRatBN7.2 12 26,807,652 - 26,813,706 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 26,807,600 - 26,813,664 (-) Ensembl mRatBN7.2 UTH_Rnor_SHR_Utx 12 27,954,944 - 27,960,469 (-) NCBI UTH_Rnor_SHR_Utx UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 12 28,565,481 - 28,571,006 (-) NCBI UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 12 27,626,976 - 27,632,501 (-) NCBI UTH_Rnor_WKY_Bbb_1.0 UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 12 30,308,469 - 30,314,520 (-) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 30,308,469 - 30,314,519 (-) Ensembl rn6 Rnor6.0 Rnor_5.0 12 32,253,295 - 32,259,362 (-) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 12 27,855,832 - 27,861,887 (-) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera 12 28,521,413 - 28,527,467 (-) NCBI Celera Cytogenetic Map 12 q13 NCBI
ZBED5 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 11 10,852,706 - 10,858,053 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 11 10,812,074 - 10,858,796 (-) Ensembl hg38 GRCh38 GRCh37 11 10,874,253 - 10,879,600 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 11 10,830,827 - 10,836,188 (-) NCBI Build 36 Build 36 hg18 NCBI36 Celera 11 10,995,917 - 11,001,286 (-) NCBI Celera Cytogenetic Map 11 p15.4 NCBI HuRef 11 10,547,165 - 10,552,534 (-) NCBI HuRef CHM1_1 11 10,873,300 - 10,878,669 (-) NCBI CHM1_1 T2T-CHM13v2.0 11 10,937,686 - 10,943,033 (-) NCBI T2T-CHM13v2.0
Zbed5 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 129,924,564 - 129,937,350 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 129,924,564 - 129,932,464 (+) Ensembl GRCm39 Ensembl GRCm39 GRCm38 5 129,895,723 - 129,908,509 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 129,895,723 - 129,903,623 (+) Ensembl mm10 GRCm38 MGSCv37 5 130,371,593 - 130,379,493 (+) NCBI MGSCv37 MGSCv37 mm9 NCBIm37 MGSCv36 5 130,180,426 - 130,188,317 (+) NCBI MGSCv36 mm8 Celera 5 126,898,278 - 126,906,178 (+) NCBI Celera Cytogenetic Map 5 G1.3 NCBI cM Map 5 68.26 NCBI
Fam200c Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955408 14,262,624 - 14,264,402 (-) Ensembl ChiLan1.0 NW_004955408 14,262,519 - 14,266,835 (-) NCBI ChiLan1.0 ChiLan1.0
FAM200C Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 4 155,578,943 - 155,586,907 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 5 153,713,293 - 153,726,453 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 5 155,784,040 - 155,792,152 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 5 162,478,277 - 162,485,202 (-) NCBI PanPan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 5 162,478,839 - 162,480,623 (-) Ensembl panPan2 panpan1.1
FAM200C Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 4 50,331,147 - 50,336,768 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 4 50,334,727 - 50,336,511 (+) Ensembl canFam3 CanFam3.1 Dog10K_Boxer_Tasha 4 50,226,515 - 50,232,383 (+) NCBI Dog10K_Boxer_Tasha Dog10K_Boxer_Tasha ROS_Cfam_1.0 4 50,766,415 - 50,772,284 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 4 50,766,441 - 50,772,284 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 4 50,574,849 - 50,580,723 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 4 50,698,619 - 50,704,489 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 4 51,218,893 - 51,224,765 (+) NCBI UU_Cfam_GSD_1.0 UU_Cfam_GSD_1.0
Zbed5 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404947 51,488,572 - 51,502,839 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936528 7,522,585 - 7,528,183 (+) Ensembl SpeTri2.0 Ensembl SpeTri2.0 NW_004936528 7,520,994 - 7,537,512 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
ZBED5 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 2 48,624,862 - 48,631,342 (+) Ensembl susScr11 Sscrofa11.1 Sscrofa11.1 2 48,624,302 - 48,630,530 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 2 51,970,709 - 51,984,665 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
ZBED5
Zbed5
Zbed5
miRNA Target Status (No longer updated)
Predicted Target Of
Count of predictions: 26 Count of miRNA genes: 26 Interacting mature miRNAs: 26 Transcripts: ENSRNOT00000001220 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction 
