Abhd14b (abhydrolase domain containing 14b) - Rat Genome Database

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Gene: Abhd14b (abhydrolase domain containing 14b) Rattus norvegicus
Analyze
Symbol: Abhd14b
Name: abhydrolase domain containing 14b
RGD ID: 1359649
Description: Predicted to enable hydrolase activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in cytosol and nucleus. Predicted to be active in cytoplasm. Orthologous to human ABHD14B (abhydrolase domain containing 14B); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: abhydrolase domain-containing protein 14B; alpha/beta hydrolase domain-containing protein 14B; MGC93766; putative protein-lysine deacylase ABHD14B; similar to RIKEN cDNA 1810013B01
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88115,966,792 - 115,970,829 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8115,965,932 - 115,970,833 (+)EnsemblGRCr8
mRatBN7.28107,087,157 - 107,092,122 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8107,088,069 - 107,092,119 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8112,711,053 - 112,715,090 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08110,910,229 - 110,914,266 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08108,753,011 - 108,757,048 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08115,149,638 - 115,154,556 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,150,514 - 115,154,550 (+)Ensemblrn6Rnor6.0
Rnor_5.08114,513,823 - 114,518,653 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48111,592,329 - 111,596,366 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8106,400,032 - 106,404,069 (+)NCBICelera
RGSC_v3.18111,611,783 - 111,615,820 (+)NCBI
Cytogenetic Map8q32NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,4-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (EXP)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrylamide  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (EXP)
aristolochic acid A  (ISO)
benzbromarone  (EXP)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
buspirone  (EXP)
butyric acid  (ISO)
cadmium dichloride  (ISO)
calycosin  (ISO)
carbon nanotube  (ISO)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
clofibric acid  (EXP)
copper(II) sulfate  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
diethyl phthalate  (EXP)
doxorubicin  (ISO)
entinostat  (ISO)
epoxiconazole  (ISO)
flutamide  (EXP)
formaldehyde  (ISO)
furan  (EXP)
gentamycin  (EXP)
glafenine  (EXP)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
L-ethionine  (EXP)
leflunomide  (EXP)
menadione  (ISO)
niclosamide  (ISO)
Nutlin-3  (ISO)
okadaic acid  (ISO)
omeprazole  (EXP)
paracetamol  (ISO)
perfluorododecanoic acid  (EXP)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propiconazole  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rotenone  (EXP,ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
thiram  (ISO)
trimellitic anhydride  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
XL147  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IEA)
cytosol  (IEA,ISO)
nucleolus  (IEA,ISO)
nucleoplasm  (IEA,ISO)
nucleus  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:14672934   PMID:19056867   PMID:19199708   PMID:23376485   PMID:23533145  


Genomics

Comparative Map Data
Abhd14b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88115,966,792 - 115,970,829 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8115,965,932 - 115,970,833 (+)EnsemblGRCr8
mRatBN7.28107,087,157 - 107,092,122 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8107,088,069 - 107,092,119 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8112,711,053 - 112,715,090 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08110,910,229 - 110,914,266 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08108,753,011 - 108,757,048 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08115,149,638 - 115,154,556 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,150,514 - 115,154,550 (+)Ensemblrn6Rnor6.0
Rnor_5.08114,513,823 - 114,518,653 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48111,592,329 - 111,596,366 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8106,400,032 - 106,404,069 (+)NCBICelera
RGSC_v3.18111,611,783 - 111,615,820 (+)NCBI
Cytogenetic Map8q32NCBI
ABHD14B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38351,968,510 - 51,974,630 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl351,968,510 - 51,983,409 (-)Ensemblhg38GRCh38
GRCh37352,002,526 - 52,008,646 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36351,977,571 - 51,983,070 (-)NCBIBuild 36Build 36hg18NCBI36
Celera351,981,800 - 51,987,920 (-)NCBICelera
Cytogenetic Map3p21.2NCBI
HuRef352,065,888 - 52,072,008 (-)NCBIHuRef
CHM1_1351,955,130 - 51,961,251 (-)NCBICHM1_1
T2T-CHM13v2.0352,001,429 - 52,007,549 (-)NCBIT2T-CHM13v2.0
Abhd14b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,324,936 - 106,330,122 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9106,324,658 - 106,330,122 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm389106,447,737 - 106,452,923 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,447,459 - 106,452,923 (+)Ensemblmm10GRCm38
MGSCv379106,350,971 - 106,355,249 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv369106,306,762 - 106,311,017 (+)NCBIMGSCv36mm8
Celera9106,075,793 - 106,080,076 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map957.53NCBI
Abhd14b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555323,614,725 - 3,619,637 (-)Ensembl
ChiLan1.0NW_0049555323,615,214 - 3,619,637 (-)NCBIChiLan1.0ChiLan1.0
ABHD14B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2251,961,693 - 51,969,034 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1351,966,463 - 51,974,077 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0351,909,933 - 51,916,356 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1353,138,116 - 53,144,399 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl353,138,116 - 53,144,399 (-)EnsemblpanPan2panpan1.1
ABHD14B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,744,128 - 37,747,844 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2037,743,939 - 37,747,567 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2037,725,589 - 37,729,333 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02038,094,689 - 38,098,434 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2038,094,529 - 38,098,157 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12037,458,304 - 37,462,049 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02037,867,068 - 37,870,814 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02038,151,931 - 38,155,676 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Abhd14b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560266,555,332 - 66,559,940 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365293,314,976 - 3,319,922 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365293,315,824 - 3,319,975 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABHD14B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1334,101,748 - 34,104,696 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11334,100,994 - 34,104,773 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,297,687 - 37,301,435 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ABHD14B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,337,474 - 13,344,143 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2213,336,535 - 13,344,383 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041153,562,876 - 153,569,705 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Abhd14b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247305,787,672 - 5,791,770 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247305,787,672 - 5,791,813 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Abhd14b
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1897,748,446 - 97,752,630 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Abhd14b
19 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:531
Count of miRNA genes:204
Interacting mature miRNAs:230
Transcripts:ENSRNOT00000016504, ENSRNOT00000064252
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)8105462581132782436Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)882352698127352698Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)861019838121662124Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)849849908118871671Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)880768445125768445Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)880768445125768445Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)870041301121080908Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)868690349119799881Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)884192326129192326Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8103375781129871912Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)8102413464132782436Rat
8693654Alc32Alcohol consumption QTL 3220.755drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)897492344116428905Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)855428333127966348Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
631217Activ1Activity QTL 115.9voluntary movement trait (VT:0003491)number of photobeam interruptions in an experimental apparatus (CMO:0001517)8111249511117802327Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
2313400Anxrr25Anxiety related response QTL 25aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)898145073122898010Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)880768445125768445Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)880768445125768445Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)891340911131690273Rat

Markers in Region
RH127780  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28107,091,707 - 107,091,927 (+)MAPPERmRatBN7.2
Rnor_6.08115,154,142 - 115,154,361NCBIRnor6.0
Rnor_5.08114,518,239 - 114,518,458UniSTSRnor5.0
RGSC_v3.48111,595,957 - 111,596,176UniSTSRGSC3.4
Celera8106,403,660 - 106,403,879UniSTS
RH 3.4 Map81140.7UniSTS
Cytogenetic Map8q32UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 160 91 90 59 87 59 6 351 187 11 139 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000016504   ⟹   ENSRNOP00000016504
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8115,965,932 - 115,970,833 (+)Ensembl
mRatBN7.2 Ensembl8107,088,069 - 107,092,114 (+)Ensembl
Rnor_6.0 Ensembl8115,150,514 - 115,154,550 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000064252   ⟹   ENSRNOP00000059235
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8115,967,812 - 115,970,833 (+)Ensembl
mRatBN7.2 Ensembl8107,089,100 - 107,092,119 (+)Ensembl
Rnor_6.0 Ensembl8115,151,627 - 115,153,686 (+)Ensembl
RefSeq Acc Id: NM_001007664   ⟹   NP_001007665
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88115,966,792 - 115,970,829 (+)NCBI
mRatBN7.28107,088,080 - 107,092,117 (+)NCBI
Rnor_6.08115,150,514 - 115,154,551 (+)NCBI
Rnor_5.08114,513,823 - 114,518,653 (+)NCBI
RGSC_v3.48111,592,329 - 111,596,366 (+)RGD
Celera8106,400,032 - 106,404,069 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001007665 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH76385 (Get FASTA)   NCBI Sequence Viewer  
  EDL77294 (Get FASTA)   NCBI Sequence Viewer  
  EDL77298 (Get FASTA)   NCBI Sequence Viewer  
  EDL77301 (Get FASTA)   NCBI Sequence Viewer  
  EDL77303 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000016504
  ENSRNOP00000016504.4
GenBank Protein Q6DGG1 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001007665   ⟸   NM_001007664
- UniProtKB: Q6DGG1 (UniProtKB/Swiss-Prot),   A6I2S6 (UniProtKB/TrEMBL),   A6I2S2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000016504   ⟸   ENSRNOT00000016504
Ensembl Acc Id: ENSRNOP00000059235   ⟸   ENSRNOT00000064252
Protein Domains
AB hydrolase-1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6DGG1-F1-model_v2 AlphaFold Q6DGG1 1-210 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696251
Promoter ID:EPDNEW_R6776
Type:initiation region
Name:Abhd14b_1
Description:abhydrolase domain containing 14b
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.08115,150,501 - 115,150,561EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359649 AgrOrtholog
BioCyc Gene G2FUF-29237 BioCyc
Ensembl Genes ENSRNOG00000012073 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000016504 ENTREZGENE
  ENSRNOT00000016504.8 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.1820 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7108802 IMAGE-MGC_LOAD
InterPro AB_hydrolase UniProtKB/Swiss-Prot
  AB_hydrolase_1 UniProtKB/Swiss-Prot
KEGG Report rno:300983 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93766 IMAGE-MGC_LOAD
NCBI Gene 300983 ENTREZGENE
PANTHER PROTEIN ABHD14B UniProtKB/Swiss-Prot
  PROTEIN ABHD14B-LIKE UniProtKB/Swiss-Prot
Pfam Abhydrolase_6 UniProtKB/Swiss-Prot
PhenoGen Abhd14b PhenoGen
RatGTEx ENSRNOG00000012073 RatGTEx
Superfamily-SCOP SSF53474 UniProtKB/Swiss-Prot
UniProt A6I2S2 ENTREZGENE, UniProtKB/TrEMBL
  A6I2S6 ENTREZGENE, UniProtKB/TrEMBL
  ABHEB_RAT UniProtKB/Swiss-Prot
  F1M5R3_RAT UniProtKB/TrEMBL
  Q6DGG1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-03-30 Abhd14b  abhydrolase domain containing 14b  MGC93766  similar to RIKEN cDNA 1810013B01  Symbol and Name updated 1299863 APPROVED
2005-07-29 MGC93766  similar to RIKEN cDNA 1810013B01      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference