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Gene: Mgrn1 (mahogunin ring finger 1) Rattus norvegicus

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Symbol:

Mgrn1

Name:

mahogunin ring finger 1

RGD ID:

1311862

Description:

Predicted to enable protein sequestering activity and ubiquitin protein ligase activity. Predicted to be involved in several processes, including endosome to lysosome transport; negative regulation of signal transduction; and protein monoubiquitination. Predicted to act upstream of or within heart development; protein polyubiquitination; and protein-containing complex assembly. Predicted to be located in endoplasmic reticulum; nucleus; and plasma membrane. Predicted to be part of ubiquitin ligase complex. Predicted to be active in cytosol and early endosome. Orthologous to human MGRN1 (mahogunin ring finger 1); PARTICIPATES IN melanocortin system pathway; ubiquitin/proteasome degradation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium dichloride.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

E3 ubiquitin-protein ligase MGRN1; LOC302938; mahoganoid; mahogunin ring finger 1, E3 ubiquitin protein ligase; mahogunin RING finger protein 1; mahogunin, ring finger 1; probable E3 ubiquitin-protein ligase MGRN1; RGD1311862; RING-type E3 ubiquitin transferase MGRN1; similar to mahogunin, ring finger 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MGRN1 (mahogunin ring finger 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Mgrn1 (mahogunin, ring finger 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mgrn1 (mahogunin ring finger 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MGRN1 (mahogunin ring finger 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MGRN1 (mahogunin ring finger 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mgrn1 (mahogunin ring finger 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MGRN1 (mahogunin ring finger 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MGRN1 (mahogunin ring finger 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mgrn1 (mahogunin ring finger 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Mgrn1 (mahogunin ring finger 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MGRN1 (mahogunin ring finger 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Mgrn1 (mahogunin, ring finger 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mgrn1a (mahogunin, ring finger 1a)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	mgrn1b (mahogunin, ring finger 1b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	C11H1.3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	C11H1.3	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG9941	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG9941	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	mgrn1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	mgrn1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	11,142,626 - 11,194,773 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	11,145,690 - 11,194,805 (-)	Ensembl				GRCr8
mRatBN7.2	10	10,638,881 - 10,688,332 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	10,638,880 - 10,688,315 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	15,348,233 - 15,396,588 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	14,837,050 - 14,885,406 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	10,506,186 - 10,554,831 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	10	14,199,241 - 14,247,889 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	10	14,858,876 - 14,907,516 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	10	16,552,497 - 16,601,137 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	10	16,545,559 - 16,594,321 (-)	NCBI		F344_StmMcwi
Rnor_6.0	10	10,832,573 - 10,881,999 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	10,833,519 - 10,881,977 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	9,599,503 - 9,648,909 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	10,756,804 - 10,805,883 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	9,604,036 - 9,652,494 (-)	NCBI		Celera
RGSC_v3.1	10	10,756,804 - 10,805,883 (-)	NCBI
Cytogenetic Map	10	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

hyperglycemia (ISO)

hyperinsulinism (ISO)

obesity (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

chromium(6+) (ISO)

cisplatin (ISO)

dexamethasone (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

fenofibrate (ISO)

fenthion (ISO)

FR900359 (ISO)

furan (EXP)

hydrogen cyanide (ISO)

indometacin (ISO)

methidathion (ISO)

nitrates (ISO)

nobiletin (ISO)

ozone (ISO)

paraquat (ISO)

potassium cyanide (ISO)

sodium arsenate (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

endosome to lysosome transport (IBA,IEA,ISO)

heart development (ISO)

in utero embryonic development (ISO)

negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (IEA,ISO,ISS)

negative regulation of G protein-coupled receptor signaling pathway (IEA,ISO)

negative regulation of smoothened signaling pathway (ISO,ISS)

protein monoubiquitination (IEA,ISO)

protein polyubiquitination (ISO)

protein ubiquitination (IEA,ISO)

protein-containing complex assembly (ISO)

smoothened signaling pathway (IBA,ISO)

Cellular Component

cytoplasm (IEA,ISO)

cytosol (IEA,ISO)

early endosome (IBA,IEA,ISO)

nucleus (IEA,ISO)

plasma membrane (IEA,ISO)

ubiquitin ligase complex (ISO)

Molecular Function

metal ion binding (IEA)

protein binding (IPI,ISO)

protein sequestering activity (IEA,ISO)

transferase activity (IEA)

ubiquitin protein ligase activity (IBA,IEA,ISO)

ubiquitin-protein transferase activity (IEA,ISO,ISS)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

melanocortin system pathway (ISO)

ubiquitin/proteasome degradation pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Melanocortin receptors and their accessory proteins.	Cooray SN and Clark AJ, Mol Cell Endocrinol. 2011 Jan 15;331(2):215-21. Epub 2010 Jul 21.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Functional conservation between mammalian MGRN1 and plant LOG2 ubiquitin ligases.	Guerra DD, etal., FEBS Lett. 2013 Nov 1;587(21):3400-5. doi: 10.1016/j.febslet.2013.08.045. Epub 2013 Sep 10.
4.	The mahoganoid mutation (Mgrn1md) improves insulin sensitivity in mice with mutations in the melanocortin signaling pathway independently of effects on adiposity.	Phan LK, etal., Am J Physiol Endocrinol Metab. 2006 Sep;291(3):E611-20. Epub 2006 Apr 25.
5.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
6.	GOA pipeline	RGD automated data pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
9.	Comprehensive gene review and curation	RGD comprehensive gene curation
10.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:12560552	PMID:15489334	PMID:17229889	PMID:19056867	PMID:19737927	PMID:19946888	PMID:22871113	PMID:23376485	PMID:28475871	PMID:29290584

Genomics

Comparative Map Data

Mgrn1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	11,142,626 - 11,194,773 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	11,145,690 - 11,194,805 (-)	Ensembl				GRCr8
mRatBN7.2	10	10,638,881 - 10,688,332 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	10,638,880 - 10,688,315 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	15,348,233 - 15,396,588 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	14,837,050 - 14,885,406 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	10,506,186 - 10,554,831 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	10	14,199,241 - 14,247,889 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	10	14,858,876 - 14,907,516 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	10	16,552,497 - 16,601,137 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	10	16,545,559 - 16,594,321 (-)	NCBI		F344_StmMcwi
Rnor_6.0	10	10,832,573 - 10,881,999 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	10,833,519 - 10,881,977 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	9,599,503 - 9,648,909 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	10,756,804 - 10,805,883 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	9,604,036 - 9,652,494 (-)	NCBI		Celera
RGSC_v3.1	10	10,756,804 - 10,805,883 (-)	NCBI
Cytogenetic Map	10	q12	NCBI

MGRN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	4,624,826 - 4,690,972 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	4,616,493 - 4,690,977 (+)	Ensembl			hg38	GRCh38
GRCh37	16	4,674,827 - 4,740,973 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	4,614,854 - 4,680,974 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	16	4,614,853 - 4,680,972	NCBI
Celera	16	4,883,683 - 4,949,753 (+)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	4,641,815 - 4,707,494 (+)	NCBI		HuRef
CHM1_1	16	4,674,882 - 4,741,756 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	4,654,281 - 4,720,424 (+)	NCBI		T2T-CHM13v2.0

Mgrn1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	4,703,964 - 4,756,160 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	4,704,113 - 4,756,160 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	16	4,886,100 - 4,938,296 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	4,886,249 - 4,938,296 (+)	Ensembl			mm10	GRCm38
MGSCv37	16	4,886,252 - 4,938,296 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	16	4,801,480 - 4,853,524 (+)	NCBI		MGSCv36	mm8
Celera	16	5,517,662 - 5,569,636 (+)	NCBI		Celera
Cytogenetic Map	16	A1	NCBI
cM Map	16	2.48	NCBI

Mgrn1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	12,781,539 - 12,824,222 (-)	Ensembl
ChiLan1.0	NW_004955442	12,780,795 - 12,823,716 (-)	NCBI	ChiLan1.0	ChiLan1.0

MGRN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	5,154,386 - 5,219,725 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	8,944,813 - 9,009,883 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	3,550,352 - 3,615,693 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	4,740,763 - 4,782,638 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	4,740,763 - 4,782,638 (+)	Ensembl			panPan2	panpan1.1

MGRN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	36,716,071 - 36,775,893 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	36,716,343 - 36,769,417 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	38,050,260 - 38,103,958 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	36,919,892 - 36,979,309 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	36,918,610 - 36,979,312 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	36,713,739 - 36,773,816 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	36,606,581 - 36,666,904 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	37,009,268 - 37,068,750 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mgrn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	106,801,950 - 106,847,702 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936530	4,652,464 - 4,693,999 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936530	4,647,550 - 4,693,143 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MGRN1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	37,694,808 - 37,748,067 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	37,694,798 - 37,748,106 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	38,753,414 - 38,806,811 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MGRN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	4,310,924 - 4,372,896 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	4,310,970 - 4,375,423 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666068	26,292,411 - 26,363,923 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mgrn1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624824	2,420,203 - 2,470,627 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624824	2,419,973 - 2,473,580 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mgrn1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	16,967,736 - 17,016,963 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mgrn1
372 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	113
Count of miRNA genes:	95
Interacting mature miRNAs:	101
Transcripts:	ENSRNOT00000004416
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313095	Bss62	Bone structure and strength QTL 62	1.5	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	5893811	50893811	Rat
631660	Hcar1	Hepatocarcinoma resistance QTL 1	3.4	0.0001	liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	10	6661118	35509383	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6660923	73950353	Rat
2313066	Bss63	Bone structure and strength QTL 63	1.4	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	10	5893811	50893811	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1250554	64349221	Rat
2313064	Bmd71	Bone mineral density QTL 71	0.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	10	5893811	50893811	Rat
1578761	Stresp21	Stress response QTL 21	3.3		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	6877142	51877142	Rat
2293680	Bss40	Bone structure and strength QTL 40	5.66	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	10	1	35730538	Rat
7387235	Uae41	Urinary albumin excretion QTL 41	5.26	0.1874	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	10	1	30004247	Rat
2313104	Bss61	Bone structure and strength QTL 61	0.9	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	10	5893811	50893811	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
10401803	Kidm50	Kidney mass QTL 50			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	10	922197	45922197	Rat
2317754	Glom25	Glomerulus QTL 25	3.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	2103708	47103708	Rat
2313081	Bss64	Bone structure and strength QTL 64	1.3	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	10	5893811	50893811	Rat
631828	Alc5	Alcohol consumption QTL 5	2.4		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	10	1	17749933	Rat
634327	Hc4	Hypercalciuria QTL 4	2.4		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	10	1	38832698	Rat

Markers in Region

D10Mco27

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	10	11,175,530 - 11,175,647 (+)	Marker Load Pipeline
mRatBN7.2	10	10,669,080 - 10,669,197 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	10,862,771 - 10,862,887	NCBI	Rnor6.0
Rnor_5.0	10	9,629,701 - 9,629,817	UniSTS	Rnor5.0
RGSC_v3.4	10	10,786,056 - 10,786,173	RGD	RGSC3.4
RGSC_v3.4	10	10,786,057 - 10,786,173	UniSTS	RGSC3.4
Celera	10	9,633,304 - 9,633,420	UniSTS
RGSC_v3.1	10	10,786,056 - 10,786,173	RGD
Cytogenetic Map	10	q12	UniSTS

RH144481

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	10,646,059 - 10,646,180 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	10,839,752 - 10,839,872	NCBI	Rnor6.0
Rnor_5.0	10	9,606,682 - 9,606,802	UniSTS	Rnor5.0
RGSC_v3.4	10	10,763,038 - 10,763,158	UniSTS	RGSC3.4
Celera	10	9,610,270 - 9,610,390	UniSTS
RH 3.4 Map	10	99.53	UniSTS
Cytogenetic Map	10	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001439701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001439702	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001439703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001439704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001439705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001439706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001439707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245793	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245794	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245795	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC083621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HE574489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HE574490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000004416 ⟹ ENSRNOP00000004416

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	11,145,690 - 11,194,800 (-)	Ensembl
mRatBN7.2 Ensembl	10	10,638,880 - 10,688,269 (-)	Ensembl
Rnor_6.0 Ensembl	10	10,833,519 - 10,881,977 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087118 ⟹ ENSRNOP00000071642

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	11,150,003 - 11,194,805 (-)	Ensembl
mRatBN7.2 Ensembl	10	10,643,551 - 10,688,298 (-)	Ensembl
Rnor_6.0 Ensembl	10	10,835,904 - 10,881,844 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095237 ⟹ ENSRNOP00000095969

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	11,146,279 - 11,194,805 (-)	Ensembl
mRatBN7.2 Ensembl	10	10,638,885 - 10,688,311 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096472 ⟹ ENSRNOP00000093009

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	11,145,690 - 11,194,800 (-)	Ensembl
mRatBN7.2 Ensembl	10	10,638,887 - 10,688,315 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114301 ⟹ ENSRNOP00000078796

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	11,146,471 - 11,194,800 (-)	Ensembl
mRatBN7.2 Ensembl	10	10,638,881 - 10,688,272 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117920 ⟹ ENSRNOP00000077703

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	11,145,690 - 11,194,737 (-)	Ensembl
mRatBN7.2 Ensembl	10	10,638,884 - 10,688,269 (-)	Ensembl

RefSeq Acc Id:

NM_001013964 ⟹ NP_001013986

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,146,278 - 11,194,739 (-)	NCBI
mRatBN7.2	10	10,639,826 - 10,688,296 (-)	NCBI
Dahl_SR_JrHsd	10	14,199,241 - 14,247,889 (-)	NCBI
Lyon_Normotensive	10	14,858,876 - 14,907,516 (-)	NCBI
Lyon_Hypertensive	10	16,552,497 - 16,601,137 (-)	NCBI
F344_StmMcwi	10	16,545,559 - 16,594,321 (-)	NCBI
Rnor_6.0	10	10,833,518 - 10,881,977 (-)	NCBI
Rnor_5.0	10	9,599,503 - 9,648,909 (-)	NCBI
RGSC_v3.4	10	10,756,804 - 10,805,883 (-)	RGD
Celera	10	9,604,036 - 9,652,494 (-)	RGD

Sequence:

show sequence

CGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGTACGCGTCGGTGCGGCCTGGTCTGA
GCCATGTCCGTGTGAGGACGCCGCAGCCGTCACCCCCTCCTCTCCGGCTGGTCCGCAGAAACCC
GCACCATGGGCTCCATCCTGAGTCGCCGCATCGCGGGCGTGGAGGACATCGACATTCAGGCCAA
CTCGGCCTATCGTTACCCTCCGAAGTCCGCAGGAAACTACTTTGCTTCGCACTTTTTCATGGGA
GGAGAGAAGTTTGACACTCCCCATCCTGAAGGTTACCTCTTTGGCGAGAACATGGACCTGAACT
TCCTGGGTAGTCGTCCAGTCCAGTTCCCCTATGTCACCCCTGCCCCCCATGAGCCAGTGAAGAC
ACTCAGGAGCCTGGTAAACATTCGCAAAGACTCTCTCCGGCTGGTGAGGTACAAAGATGACACA
GACAGCCCCACAGAGGACGGCGAGAAGCCCCGCGTGCTCTACAGTCTGGAATTCACCTTTGATG
CTGATGCCCGTGTGGCTATCACCATTTATTGCCAGGCAGTGGAGGAGTTTGTCAACGGCATGAC
GGTGTACAGCTGTAAGAACCCTTCTCTGCAATCTGAGACTGTCCATTACAAGAGAGGCGTTAGC
CAGCAGTTCTCCCTGCCTTCTTTCAAGATTGACTTCTCCGAGTGGAAGGATGATGAGCTGAACT
TTGACCTGGACCGGGGTGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGATGAAGGAGATGTTGT
GGAAGTGACTGGCCACGCTCATGTGCTCTTGGCTGCCTTTGAGAAGCACGTGGATGGCAGCTTC
TCCGTGAAGCCATTAAAGCAGAAGCAAATTGTGGACCGGGTCAGCTACCTGCTGCAAGAGATCT
ACGGCATTGAGAACAAGAACAACCAGGAGACTAAGCCTTCCGACGATGAGAACAGTGACAACAG
CAGTGAGTGTGTGGTGTGCCTGTCAGACTTGCGGGACACGCTAATCCTGCCCTGCCGCCACTTG
TGCCTCTGCACTTCCTGTGCTGACACGCTGCGGTACCAGGCCAACAACTGCCCCATCTGCCGGC
TGCCATTCCGAGCTCTCCTACAGATCCGGGCTGTACGGAAGAAGCCAGGAGCTCTGTCTCCCAT
CTCCTTCAGTCCTGTCTTGGCCCAAAGTGTGGACCACGATGAACACTCTAATTCTGACAGTGTC
CCACCTGGCTATGAGCCCATCTCCTTGCTCGAGGCACTCAATGGACTACGGGCTGTCTCCCCGG
CTATCCCATCAGCTCCCCTCTATGAGGAAATCACCTACTCAGGCATCTCGGACGGTCTTTCCCA
GGCCAGTTGTCCCCTTGCTGGACTCGATCGAATCATAGAAAATGGAATACAGAAGGGCAAGACA
CAGAGCAAGTCTCCAGACAGCACCCTGCGGTCTCCATCATCTCCCATTCATGAGGAGGATGAGG
AGAAGCTCTCAGAGGACCCGGAGGCTCCTCTCCCACCAAGCGGTGTGGAGCTCGTGCTTCAGGA
GAGCAGCTCCCCTGAGAGTTTCGGAACAGAGGAGGTGGGTGAGCCATCCCTAAAGCAAGGAAGC
CGAGTACCCTCTATTGATGATGTCCTGCAGGATGGCAGTCCCCAGCATCATGGTTGCAGCCAGC
CAGTCCCTCCTGCTGACATCTACCTACCAGCCCTGGGTCCTGAGTCGTGCTCTGTTGGTATAGA
GGAGTAAGCTGGATGGTCCACCTCCATGGAGACACACAGCCTTGCCACCACCAGCTCCCCCTGG
CCTTTGCTGAGTGGCTCTAGTCCCGAACCTGGAGCTTCTGAGCTGACCCCTCTCTGAGAGTATG
GCTCAGTGGGCAGCACAGAGCCCTCAGCATCCCAAACATTGCCAGGAGACTCCCTGGACCCCAG
CGAGACCCTGGCCTCTCCTGTCTGCACGCCTCATGTGGCCACTGGGATTTGAGGGGCCACAGGG
AACCTTGATCCAATTGCACAGTGGGTTGTTCCTCCCCACACCCTCCTTTTTTATGGTCAATAGA
TTTGTAAATGGTACAAGATGAAGGACAGCAGCTGTCCCCATGGGCCACGAGCCCTAGAGGGACT
CTCCCCAACTGTCAAAGCTGATGCTTTGAGCACTTAGCAAACCAGCATAAGAGAATCTACCCAT
GGACTGAAGTGTCATCCTCACAAACACTCTGGAAGGTGGGCCGCCTAGGTTACGGTTATGAAGG
AAACAATGCCTGTCTCATGTGAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006245792 ⟹ XP_006245854

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,142,626 - 11,194,752 (-)	NCBI
mRatBN7.2	10	10,638,881 - 10,688,332 (-)	NCBI
Rnor_6.0	10	10,832,573 - 10,881,999 (-)	NCBI
Rnor_5.0	10	9,599,503 - 9,648,909 (-)	NCBI

Sequence:

show sequence

GGCGGGGGCTGTGGAGAGGAGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGTAC
GCGTCGGTGCGGCCTGGTCTGAGCCATGTCCGTGTGAGGACGCCGCAGCCGTCACCCCCTCCTC
TCCGGCTGGTCCGCAGAAACCCGCACCATGGGCTCCATCCTGAGTCGCCGCATCGCGGGCGTGG
AGGACATCGACATTCAGGCCAACTCGGCCTATCGTTACCCTCCGAAGTCCGCAGGAAACTACTT
TGCTTCGCACTTTTTCATGGGAGGAGAGAAGTTTGACACTCCCCATCCTGAAGGTTACCTCTTT
GGCGAGAACATGGACCTGAACTTCCTGGGTAGTCGTCCAGTCCAGTTCCCCTATGTCACCCCTG
CCCCCCATGAGCCAGTGAAGACACTCAGGAGCCTGGTAAACATTCGCAAAGACTCTCTCCGGCT
GGTGAGGTACAAAGATGACACAGACAGCCCCACAGAGGACGGCGAGAAGCCCCGCGTGCTCTAC
AGTCTGGAATTCACCTTTGATGCTGATGCCCGTGTGGCTATCACCATTTATTGCCAGGCAGTGG
AGGAGTTTGTCAACGGCATGACGGTGTACAGCTGTAAGAACCCTTCTCTGCAATCTGAGACTGT
CCATTACAAGAGAGGCGTTAGCCAGCAGTTCTCCCTGCCTTCTTTCAAGATTGACTTCTCCGAG
TGGAAGGATGATGAGCTGAACTTTGACCTGGACCGGGGTGTGTTTCCAGTAGTCATCCAGGCTG
TGGTGGATGAAGGAGATGTTGTGGAAGTGACTGGCCACGCTCATGTGCTCTTGGCTGCCTTTGA
GAAGCACGTGGATGGCAGCTTCTCCGTGAAGCCATTAAAGCAGAAGCAAATTGTGGACCGGGTC
AGCTACCTGCTGCAAGAGATCTACGGCATTGAGAACAAGAACAACCAGGAGACTAAGCCTTCCG
ACGATGAGAACAGTGACAACAGCAGTGAGTGTGTGGTGTGCCTGTCAGACTTGCGGGACACGCT
AATCCTGCCCTGCCGCCACTTGTGCCTCTGCACTTCCTGTGCTGACACGCTGCGGTACCAGGCC
AACAACTGCCCCATCTGCCGGCTGCCATTCCGAGCTCTCCTACAGATCCGGGCTGTACGGAAGA
AGCCAGGAGCTCTGTCTCCCATCTCCTTCAGTCCTGTCTTGGCCCAAAGTGTGGACCACGATGA
ACACTCTTGTCCCTTTAAAAAATCAAAGTCGCACCCTGCCTCCCTGGCCAGCAAGAAACCTAAA
AGGGAAACAAATTCTGACAGTGTCCCACCTGGCTATGAGCCCATCTCCTTGCTCGAGGCACTCA
ATGGACTACGGGCTGTCTCCCCGGCTATCCCATCAGCTCCCCTCTATGAGGAAATCACCTACTC
AGGCATCTCGGACGGTCTTTCCCAGGCCAGTTGTCCCCTTGCTGGACTCGATCGAATCATAGAA
AATGGAATACAGAAGGGCAAGACACAGAGCAAGTCTCCAGACAGCACCCTGCGGTCTCCATCAT
CTCCCATTCATGAGGAGGATGAGGAGAAGCTCTCAGAGGACCCGGAGGCTCCTCTCCCACCAAG
CGGTGTGGAGCTCGTGCTTCAGGAGAGCAGCTCCCCTGAGAGTTTCGGAACAGAGGAGGTGGGT
GAGCCATCCCTAAAGCAAGGAAGCCGAGTACCCTCTATTGATGATGTCCTGCAGGATGGCAGTC
CCCAGCATCATGGTTGCAGCCAGCCAGTCCCTCCTGCTGACATCTACCTACCAGGATGGTCCAC
CTCCATGGAGACACACAGCCTTGCCACCACCAGCTCCCCCTGGCCTCTGCTGAGTGGCTCTAGT
CCCGAACCTGGAGCTTCTGAGCTGACCCCTCTCTGAGAGTATGGCTCAGTGGGCAGCACAGAGC
CCTCAGCATCCCAAACATTGCCAGGAGACTCCCTGGACCCCAGCGAGACCCTGGCCTCTCCTGT
CTGCACGCCTCATGTGGCCACTGGGATTTGAGGGGCCACAGGGAACCTTGATCCAATTGCACAG
TGGGTTGTTCCTCCCCACACCCTCCTTTTTTATGGTCAATAGATTTGTAAATGGTACAAGATGA
AGGACAGCAGCTGTCCCCATGGGCCACGAGCCCTAGAGGGACTCTCCCCAACTGTCAAAGCTGA
TGCTTTGAGCACTTAGCAAACCAGCATAAGAGAATCTACCCATGGACTGAAGTGTCATCCTCAC
AAACACTCTGGAAGGTGGGCCGCCTAGGTTACGGTTATGAAGGAAACAATGCCTGTCTCATGTG
ACCCCAAGGCAGCCAGGCTGTCATTGCTGCTTTCTTTCACCTTACAGATGTCCTGAGCATGGGT
GACCCTCCTTGGAGCCTCCAGGTCCCCTCCTGCTCTGCTCTACTACCCACTAGTGATCTCTGGC
AGCTGTCCAGCTGAGGCAGCTGAGGCAAGGCGGGGGTAGTCAGACTGTGTTAACACCACAGTCC
TTTGCAGTGGTCAGTGTCCAGTAGCCCTCACAGGTCCTGCTTCACTCACATCCTCACAGGCCTC
CAAGATGGAGATGCTTGTGCTTGCAGGGCAACACTGCCCACCACCTGCCAGGGACGAGCCTGAG
CAGCTTCCACAGCACATCCATTGCCAGTTACCTGTCCTTTTACTTTCTTACCGATTTATTGTCT
GAGGCTTCTGTCACAGGATCCTAGGGTCACTTGGTTTCTAAGGCAGAAGTAGCCCAAGGGTGGC
CCCAGGGCAGAGATGCCCCAGGCAATGCAGCTCCCTGGTCAGTTAGAGAGGGAAGTCAGCCCAA
GGAGCTGCCCTGCCACTCACCCAGGTGACAGCCTGTAGCAATGCATGGAGACCCCTTTAGGCTC
AGGGTTGCTTGAGCTCTGGCTCTCCCCCTGCTCCTTCCTAGCAGTGACTGGCCTGGTCTCTGGT
AAGCCTGTAAGCACAGTTCTGTCTGCATATCCATCCGTATTTTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTGAATGCACATATGTGCACACATGTCAGCATGTGCATGCC
CACCCCTCACTTCTCACCTGCCAACACCCTGGCGCCTGGTGCCAGTACTTTGAAAGATGGGATG
CAGACTCCACACTTACCTGTCTCAGATTCACATGTACTATCATTTGATGTACTGATTGGCTAGT
TTGGGTTCATTTTTACTGTATATTTATAGTAATAAAATCATGCAGCAATA

hide sequence

RefSeq Acc Id:

XM_006245793 ⟹ XP_006245855

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,142,626 - 11,194,773 (-)	NCBI
mRatBN7.2	10	10,638,881 - 10,688,317 (-)	NCBI
Rnor_6.0	10	10,832,573 - 10,881,999 (-)	NCBI
Rnor_5.0	10	9,599,503 - 9,648,909 (-)	NCBI

Sequence:

show sequence

GGCGGGGGCTGTGGAGAGGAGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGTAC
GCGTCGGTGCGGCCTGGTCTGAGCCATGTCCGTGTGAGGACGCCGCAGCCGTCACCCCCTCCTC
TCCGGCTGGTCCGCAGAAACCCGCACCATGGGCTCCATCCTGAGTCGCCGCATCGCGGGCGTGG
AGGACATCGACATTCAGGCCAACTCGGCCTATCGTTACCCTCCGAAGTCCGGAAACTACTTTGC
TTCGCACTTTTTCATGGGAGGAGAGAAGTTTGACACTCCCCATCCTGAAGGTTACCTCTTTGGC
GAGAACATGGACCTGAACTTCCTGGGTAGTCGTCCAGTCCAGTTCCCCTATGTCACCCCTGCCC
CCCATGAGCCAGTGAAGACACTCAGGAGCCTGGTAAACATTCGCAAAGACTCTCTCCGGCTGGT
GAGGTACAAAGATGACACAGACAGCCCCACAGAGGACGGCGAGAAGCCCCGCGTGCTCTACAGT
CTGGAATTCACCTTTGATGCTGATGCCCGTGTGGCTATCACCATTTATTGCCAGGCAGTGGAGG
AGTTTGTCAACGGCATGACGGTGTACAGCTGTAAGAACCCTTCTCTGCAATCTGAGACTGTCCA
TTACAAGAGAGGCGTTAGCCAGCAGTTCTCCCTGCCTTCTTTCAAGATTGACTTCTCCGAGTGG
AAGGATGATGAGCTGAACTTTGACCTGGACCGGGGTGTGTTTCCAGTAGTCATCCAGGCTGTGG
TGGATGAAGGAGATGTTGTGGAAGTGACTGGCCACGCTCATGTGCTCTTGGCTGCCTTTGAGAA
GCACGTGGATGGCAGCTTCTCCGTGAAGCCATTAAAGCAGAAGCAAATTGTGGACCGGGTCAGC
TACCTGCTGCAAGAGATCTACGGCATTGAGAACAAGAACAACCAGGAGACTAAGCCTTCCGACG
ATGAGAACAGTGACAACAGCAGTGAGTGTGTGGTGTGCCTGTCAGACTTGCGGGACACGCTAAT
CCTGCCCTGCCGCCACTTGTGCCTCTGCACTTCCTGTGCTGACACGCTGCGGTACCAGGCCAAC
AACTGCCCCATCTGCCGGCTGCCATTCCGAGCTCTCCTACAGATCCGGGCTGTACGGAAGAAGC
CAGGAGCTCTGTCTCCCATCTCCTTCAGTCCTGTCTTGGCCCAAAGTGTGGACCACGATGAACA
CTCTTGTCCCTTTAAAAAATCAAAGTCGCACCCTGCCTCCCTGGCCAGCAAGAAACCTAAAAGG
GAAACAAATTCTGACAGTGTCCCACCTGGCTATGAGCCCATCTCCTTGCTCGAGGCACTCAATG
GACTACGGGCTGTCTCCCCGGCTATCCCATCAGCTCCCCTCTATGAGGAAATCACCTACTCAGG
CATCTCGGACGGTCTTTCCCAGGCCAGTTGTCCCCTTGCTGGACTCGATCGAATCATAGAAAAT
GGAATACAGAAGGGCAAGACACAGAGCAAGTCTCCAGACAGCACCCTGCGGTCTCCATCATCTC
CCATTCATGAGGAGGATGAGGAGAAGCTCTCAGAGGACCCGGAGGCTCCTCTCCCACCAAGCGG
TGTGGAGCTCGTGCTTCAGGAGAGCAGCTCCCCTGAGAGTTTCGGAACAGAGGAGGTGGGTGAG
CCATCCCTAAAGCAAGGAAGCCGAGTACCCTCTATTGATGATGTCCTGCAGGATGGCAGTCCCC
AGCATCATGGTTGCAGCCAGCCAGTCCCTCCTGCTGACATCTACCTACCAGGATGGTCCACCTC
CATGGAGACACACAGCCTTGCCACCACCAGCTCCCCCTGGCCTCTGCTGAGTGGCTCTAGTCCC
GAACCTGGAGCTTCTGAGCTGACCCCTCTCTGAGAGTATGGCTCAGTGGGCAGCACAGAGCCCT
CAGCATCCCAAACATTGCCAGGAGACTCCCTGGACCCCAGCGAGACCCTGGCCTCTCCTGTCTG
CACGCCTCATGTGGCCACTGGGATTTGAGGGGCCACAGGGAACCTTGATCCAATTGCACAGTGG
GTTGTTCCTCCCCACACCCTCCTTTTTTATGGTCAATAGATTTGTAAATGGTACAAGATGAAGG
ACAGCAGCTGTCCCCATGGGCCACGAGCCCTAGAGGGACTCTCCCCAACTGTCAAAGCTGATGC
TTTGAGCACTTAGCAAACCAGCATAAGAGAATCTACCCATGGACTGAAGTGTCATCCTCACAAA
CACTCTGGAAGGTGGGCCGCCTAGGTTACGGTTATGAAGGAAACAATGCCTGTCTCATGTGACC
CCAAGGCAGCCAGGCTGTCATTGCTGCTTTCTTTCACCTTACAGATGTCCTGAGCATGGGTGAC
CCTCCTTGGAGCCTCCAGGTCCCCTCCTGCTCTGCTCTACTACCCACTAGTGATCTCTGGCAGC
TGTCCAGCTGAGGCAGCTGAGGCAAGGCGGGGGTAGTCAGACTGTGTTAACACCACAGTCCTTT
GCAGTGGTCAGTGTCCAGTAGCCCTCACAGGTCCTGCTTCACTCACATCCTCACAGGCCTCCAA
GATGGAGATGCTTGTGCTTGCAGGGCAACACTGCCCACCACCTGCCAGGGACGAGCCTGAGCAG
CTTCCACAGCACATCCATTGCCAGTTACCTGTCCTTTTACTTTCTTACCGATTTATTGTCTGAG
GCTTCTGTCACAGGATCCTAGGGTCACTTGGTTTCTAAGGCAGAAGTAGCCCAAGGGTGGCCCC
AGGGCAGAGATGCCCCAGGCAATGCAGCTCCCTGGTCAGTTAGAGAGGGAAGTCAGCCCAAGGA
GCTGCCCTGCCACTCACCCAGGTGACAGCCTGTAGCAATGCATGGAGACCCCTTTAGGCTCAGG
GTTGCTTGAGCTCTGGCTCTCCCCCTGCTCCTTCCTAGCAGTGACTGGCCTGGTCTCTGGTAAG
CCTGTAAGCACAGTTCTGTCTGCATATCCATCCGTATTTTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTGAATGCACATATGTGCACACATGTCAGCATGTGCATGCCCAC
CCCTCACTTCTCACCTGCCAACACCCTGGCGCCTGGTGCCAGTACTTTGAAAGATGGGATGCAG
ACTCCACACTTACCTGTCTCAGATTCACATGTACTATCATTTGATGTACTGATTGGCTAGTTTG
GGTTCATTTTTACTGTATATTTATAGTAATAAAATCATGCAGCAATA

hide sequence

RefSeq Acc Id:

XM_006245794 ⟹ XP_006245856

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,142,626 - 11,194,752 (-)	NCBI
mRatBN7.2	10	10,638,881 - 10,688,291 (-)	NCBI
Rnor_6.0	10	10,832,573 - 10,881,998 (-)	NCBI
Rnor_5.0	10	9,599,503 - 9,648,909 (-)	NCBI

Sequence:

show sequence

GCGGGGGCTGTGGAGAGGAGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGTACG
CGTCGGTGCGGCCTGGTCTGAGCCATGTCCGTGTGAGGACGCCGCAGCCGTCACCCCCTCCTCT
CCGGCTGGTCCGCAGAAACCCGCACCATGGGCTCCATCCTGAGTCGCCGCATCGCGGGCGTGGA
GGACATCGACATTCAGGCCAACTCGGCCTATCGTTACCCTCCGAAGTCCGCAGGAAACTACTTT
GCTTCGCACTTTTTCATGGGAGGAGAGAAGTTTGACACTCCCCATCCTGAAGGTTACCTCTTTG
GCGAGAACATGGACCTGAACTTCCTGGGTAGTCGTCCAGTCCAGTTCCCCTATGTCACCCCTGC
CCCCCATGAGCCAGTGAAGACACTCAGGAGCCTGGTAAACATTCGCAAAGACTCTCTCCGGCTG
GTGAGGTACAAAGATGACACAGACAGCCCCACAGAGGACGGCGAGAAGCCCCGCGTGCTCTACA
GTCTGGAATTCACCTTTGATGCTGATGCCCGTGTGGCTATCACCATTTATTGCCAGGCAGTGGA
GGAGTTTGTCAACGGCATGACGGTGTACAGCTGTAAGAACCCTTCTCTGCAATCTGAGACTGTC
CATTACAAGAGAGGCGTTAGCCAGCAGTTCTCCCTGCCTTCTTTCAAGATTGACTTCTCCGAGT
GGAAGGATGATGAGCTGAACTTTGACCTGGACCGGGGTGTGTTTCCAGTAGTCATCCAGGCTGT
GGTGGATGAAGGAGATGTTGTGGAAGTGACTGGCCACGCTCATGTGCTCTTGGCTGCCTTTGAG
AAGCACGTGGATGGCAGCTTCTCCGTGAAGCCATTAAAGCAGAAGCAAATTGTGGACCGGGTCA
GCTACCTGCTGCAAGAGATCTACGGCATTGAGAACAAGAACAACCAGGAGACTAAGCCTTCCGA
CGATGAGAACAGTGACAACAGCAGTGAGTGTGTGGTGTGCCTGTCAGACTTGCGGGACACGCTA
ATCCTGCCCTGCCGCCACTTGTGCCTCTGCACTTCCTGTGCTGACACGCTGCGGTACCAGGCCA
ACAACTGCCCCATCTGCCGGCTGCCATTCCGAGCTCTCCTACAGATCCGGGCTGTACGGAAGAA
GCCAGGAGCTCTGTCTCCCATCTCCTTCAGTCCTGTCTTGGCCCAAAGTGTGGACCACGATGAA
CACTCTAATTCTGACAGTGTCCCACCTGGCTATGAGCCCATCTCCTTGCTCGAGGCACTCAATG
GACTACGGGCTGTCTCCCCGGCTATCCCATCAGCTCCCCTCTATGAGGAAATCACCTACTCAGG
CATCTCGGACGGTCTTTCCCAGGCCAGTTGTCCCCTTGCTGGACTCGATCGAATCATAGAAAAT
GGAATACAGAAGGGCAAGACACAGAGCAAGTCTCCAGACAGCACCCTGCGGTCTCCATCATCTC
CCATTCATGAGGAGGATGAGGAGAAGCTCTCAGAGGACCCGGAGGCTCCTCTCCCACCAAGCGG
TGTGGAGCTCGTGCTTCAGGAGAGCAGCTCCCCTGAGAGTTTCGGAACAGAGGAGGTGGGTGAG
CCATCCCTAAAGCAAGGAAGCCGAGTACCCTCTATTGATGATGTCCTGCAGGATGGCAGTCCCC
AGCATCATGGTTGCAGCCAGCCAGTCCCTCCTGCTGACATCTACCTACCAGGATGGTCCACCTC
CATGGAGACACACAGCCTTGCCACCACCAGCTCCCCCTGGCCTCTGCTGAGTGGCTCTAGTCCC
GAACCTGGAGCTTCTGAGCTGACCCCTCTCTGAGAGTATGGCTCAGTGGGCAGCACAGAGCCCT
CAGCATCCCAAACATTGCCAGGAGACTCCCTGGACCCCAGCGAGACCCTGGCCTCTCCTGTCTG
CACGCCTCATGTGGCCACTGGGATTTGAGGGGCCACAGGGAACCTTGATCCAATTGCACAGTGG
GTTGTTCCTCCCCACACCCTCCTTTTTTATGGTCAATAGATTTGTAAATGGTACAAGATGAAGG
ACAGCAGCTGTCCCCATGGGCCACGAGCCCTAGAGGGACTCTCCCCAACTGTCAAAGCTGATGC
TTTGAGCACTTAGCAAACCAGCATAAGAGAATCTACCCATGGACTGAAGTGTCATCCTCACAAA
CACTCTGGAAGGTGGGCCGCCTAGGTTACGGTTATGAAGGAAACAATGCCTGTCTCATGTGACC
CCAAGGCAGCCAGGCTGTCATTGCTGCTTTCTTTCACCTTACAGATGTCCTGAGCATGGGTGAC
CCTCCTTGGAGCCTCCAGGTCCCCTCCTGCTCTGCTCTACTACCCACTAGTGATCTCTGGCAGC
TGTCCAGCTGAGGCAGCTGAGGCAAGGCGGGGGTAGTCAGACTGTGTTAACACCACAGTCCTTT
GCAGTGGTCAGTGTCCAGTAGCCCTCACAGGTCCTGCTTCACTCACATCCTCACAGGCCTCCAA
GATGGAGATGCTTGTGCTTGCAGGGCAACACTGCCCACCACCTGCCAGGGACGAGCCTGAGCAG
CTTCCACAGCACATCCATTGCCAGTTACCTGTCCTTTTACTTTCTTACCGATTTATTGTCTGAG
GCTTCTGTCACAGGATCCTAGGGTCACTTGGTTTCTAAGGCAGAAGTAGCCCAAGGGTGGCCCC
AGGGCAGAGATGCCCCAGGCAATGCAGCTCCCTGGTCAGTTAGAGAGGGAAGTCAGCCCAAGGA
GCTGCCCTGCCACTCACCCAGGTGACAGCCTGTAGCAATGCATGGAGACCCCTTTAGGCTCAGG
GTTGCTTGAGCTCTGGCTCTCCCCCTGCTCCTTCCTAGCAGTGACTGGCCTGGTCTCTGGTAAG
CCTGTAAGCACAGTTCTGTCTGCATATCCATCCGTATTTTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTGAATGCACATATGTGCACACATGTCAGCATGTGCATGCCCAC
CCCTCACTTCTCACCTGCCAACACCCTGGCGCCTGGTGCCAGTACTTTGAAAGATGGGATGCAG
ACTCCACACTTACCTGTCTCAGATTCACATGTACTATCATTTGATGTACTGATTGGCTAGTTTG
GGTTCATTTTTACTGTATATTTATAGTAATAAAATCATGCAGCAATA

hide sequence

RefSeq Acc Id:

XM_006245795 ⟹ XP_006245857

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,142,626 - 11,194,773 (-)	NCBI
mRatBN7.2	10	10,638,881 - 10,688,317 (-)	NCBI
Rnor_6.0	10	10,832,573 - 10,881,998 (-)	NCBI
Rnor_5.0	10	9,599,503 - 9,648,909 (-)	NCBI

Sequence:

show sequence

GCGGGGGCTGTGGAGAGGAGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGTACG
CGTCGGTGCGGCCTGGTCTGAGCCATGTCCGTGTGAGGACGCCGCAGCCGTCACCCCCTCCTCT
CCGGCTGGTCCGCAGAAACCCGCACCATGGGCTCCATCCTGAGTCGCCGCATCGCGGGCGTGGA
GGACATCGACATTCAGGCCAACTCGGCCTATCGTTACCCTCCGAAGTCCGGAAACTACTTTGCT
TCGCACTTTTTCATGGGAGGAGAGAAGTTTGACACTCCCCATCCTGAAGGTTACCTCTTTGGCG
AGAACATGGACCTGAACTTCCTGGGTAGTCGTCCAGTCCAGTTCCCCTATGTCACCCCTGCCCC
CCATGAGCCAGTGAAGACACTCAGGAGCCTGGTAAACATTCGCAAAGACTCTCTCCGGCTGGTG
AGGTACAAAGATGACACAGACAGCCCCACAGAGGACGGCGAGAAGCCCCGCGTGCTCTACAGTC
TGGAATTCACCTTTGATGCTGATGCCCGTGTGGCTATCACCATTTATTGCCAGGCAGTGGAGGA
GTTTGTCAACGGCATGACGGTGTACAGCTGTAAGAACCCTTCTCTGCAATCTGAGACTGTCCAT
TACAAGAGAGGCGTTAGCCAGCAGTTCTCCCTGCCTTCTTTCAAGATTGACTTCTCCGAGTGGA
AGGATGATGAGCTGAACTTTGACCTGGACCGGGGTGTGTTTCCAGTAGTCATCCAGGCTGTGGT
GGATGAAGGAGATGTTGTGGAAGTGACTGGCCACGCTCATGTGCTCTTGGCTGCCTTTGAGAAG
CACGTGGATGGCAGCTTCTCCGTGAAGCCATTAAAGCAGAAGCAAATTGTGGACCGGGTCAGCT
ACCTGCTGCAAGAGATCTACGGCATTGAGAACAAGAACAACCAGGAGACTAAGCCTTCCGACGA
TGAGAACAGTGACAACAGCAGTGAGTGTGTGGTGTGCCTGTCAGACTTGCGGGACACGCTAATC
CTGCCCTGCCGCCACTTGTGCCTCTGCACTTCCTGTGCTGACACGCTGCGGTACCAGGCCAACA
ACTGCCCCATCTGCCGGCTGCCATTCCGAGCTCTCCTACAGATCCGGGCTGTACGGAAGAAGCC
AGGAGCTCTGTCTCCCATCTCCTTCAGTCCTGTCTTGGCCCAAAGTGTGGACCACGATGAACAC
TCTAATTCTGACAGTGTCCCACCTGGCTATGAGCCCATCTCCTTGCTCGAGGCACTCAATGGAC
TACGGGCTGTCTCCCCGGCTATCCCATCAGCTCCCCTCTATGAGGAAATCACCTACTCAGGCAT
CTCGGACGGTCTTTCCCAGGCCAGTTGTCCCCTTGCTGGACTCGATCGAATCATAGAAAATGGA
ATACAGAAGGGCAAGACACAGAGCAAGTCTCCAGACAGCACCCTGCGGTCTCCATCATCTCCCA
TTCATGAGGAGGATGAGGAGAAGCTCTCAGAGGACCCGGAGGCTCCTCTCCCACCAAGCGGTGT
GGAGCTCGTGCTTCAGGAGAGCAGCTCCCCTGAGAGTTTCGGAACAGAGGAGGTGGGTGAGCCA
TCCCTAAAGCAAGGAAGCCGAGTACCCTCTATTGATGATGTCCTGCAGGATGGCAGTCCCCAGC
ATCATGGTTGCAGCCAGCCAGTCCCTCCTGCTGACATCTACCTACCAGGATGGTCCACCTCCAT
GGAGACACACAGCCTTGCCACCACCAGCTCCCCCTGGCCTCTGCTGAGTGGCTCTAGTCCCGAA
CCTGGAGCTTCTGAGCTGACCCCTCTCTGAGAGTATGGCTCAGTGGGCAGCACAGAGCCCTCAG
CATCCCAAACATTGCCAGGAGACTCCCTGGACCCCAGCGAGACCCTGGCCTCTCCTGTCTGCAC
GCCTCATGTGGCCACTGGGATTTGAGGGGCCACAGGGAACCTTGATCCAATTGCACAGTGGGTT
GTTCCTCCCCACACCCTCCTTTTTTATGGTCAATAGATTTGTAAATGGTACAAGATGAAGGACA
GCAGCTGTCCCCATGGGCCACGAGCCCTAGAGGGACTCTCCCCAACTGTCAAAGCTGATGCTTT
GAGCACTTAGCAAACCAGCATAAGAGAATCTACCCATGGACTGAAGTGTCATCCTCACAAACAC
TCTGGAAGGTGGGCCGCCTAGGTTACGGTTATGAAGGAAACAATGCCTGTCTCATGTGACCCCA
AGGCAGCCAGGCTGTCATTGCTGCTTTCTTTCACCTTACAGATGTCCTGAGCATGGGTGACCCT
CCTTGGAGCCTCCAGGTCCCCTCCTGCTCTGCTCTACTACCCACTAGTGATCTCTGGCAGCTGT
CCAGCTGAGGCAGCTGAGGCAAGGCGGGGGTAGTCAGACTGTGTTAACACCACAGTCCTTTGCA
GTGGTCAGTGTCCAGTAGCCCTCACAGGTCCTGCTTCACTCACATCCTCACAGGCCTCCAAGAT
GGAGATGCTTGTGCTTGCAGGGCAACACTGCCCACCACCTGCCAGGGACGAGCCTGAGCAGCTT
CCACAGCACATCCATTGCCAGTTACCTGTCCTTTTACTTTCTTACCGATTTATTGTCTGAGGCT
TCTGTCACAGGATCCTAGGGTCACTTGGTTTCTAAGGCAGAAGTAGCCCAAGGGTGGCCCCAGG
GCAGAGATGCCCCAGGCAATGCAGCTCCCTGGTCAGTTAGAGAGGGAAGTCAGCCCAAGGAGCT
GCCCTGCCACTCACCCAGGTGACAGCCTGTAGCAATGCATGGAGACCCCTTTAGGCTCAGGGTT
GCTTGAGCTCTGGCTCTCCCCCTGCTCCTTCCTAGCAGTGACTGGCCTGGTCTCTGGTAAGCCT
GTAAGCACAGTTCTGTCTGCATATCCATCCGTATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTGAATGCACATATGTGCACACATGTCAGCATGTGCATGCCCACCCC
TCACTTCTCACCTGCCAACACCCTGGCGCCTGGTGCCAGTACTTTGAAAGATGGGATGCAGACT
CCACACTTACCTGTCTCAGATTCACATGTACTATCATTTGATGTACTGATTGGCTAGTTTGGGT
TCATTTTTACTGTATATTTATAGTAATAAAATCATGCAGCAATA

hide sequence

RefSeq Acc Id:

XM_006245796 ⟹ XP_006245858

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,146,661 - 11,194,752 (-)	NCBI
mRatBN7.2	10	10,638,881 - 10,688,291 (-)	NCBI
Rnor_6.0	10	10,832,573 - 10,881,999 (-)	NCBI
Rnor_5.0	10	9,599,503 - 9,648,909 (-)	NCBI

Sequence:

show sequence

GGCGGGGGCTGTGGAGAGGAGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGTAC
GCGTCGGTGCGGCCTGGTCTGAGCCATGTCCGTGTGAGGACGCCGCAGCCGTCACCCCCTCCTC
TCCGGCTGGTCCGCAGAAACCCGCACCATGGGCTCCATCCTGAGTCGCCGCATCGCGGGCGTGG
AGGACATCGACATTCAGGCCAACTCGGCCTATCGTTACCCTCCGAAGTCCGCAGGAAACTACTT
TGCTTCGCACTTTTTCATGGGAGGAGAGAAGTTTGACACTCCCCATCCTGAAGGTTACCTCTTT
GGCGAGAACATGGACCTGAACTTCCTGGGTAGTCGTCCAGTCCAGTTCCCCTATGTCACCCCTG
CCCCCCATGAGCCAGTGAAGACACTCAGGAGCCTGGTAAACATTCGCAAAGACTCTCTCCGGCT
GGTGAGGTACAAAGATGACACAGACAGCCCCACAGAGGACGGCGAGAAGCCCCGCGTGCTCTAC
AGTCTGGAATTCACCTTTGATGCTGATGCCCGTGTGGCTATCACCATTTATTGCCAGGCAGTGG
AGGAGTTTGTCAACGGCATGACGGTGTACAGCTGTAAGAACCCTTCTCTGCAATCTGAGACTGT
CCATTACAAGAGAGGCGTTAGCCAGCAGTTCTCCCTGCCTTCTTTCAAGATTGACTTCTCCGAG
TGGAAGGATGATGAGCTGAACTTTGACCTGGACCGGGGTGTGTTTCCAGTAGTCATCCAGGCTG
TGGTGGATGAAGGAGATGTTGTGGAAGTGACTGGCCACGCTCATGTGCTCTTGGCTGCCTTTGA
GAAGCACGTGGATGGCAGCTTCTCCGTGAAGCCATTAAAGCAGAAGCAAATTGTGGACCGGGTC
AGCTACCTGCTGCAAGAGATCTACGGCATTGAGAACAAGAACAACCAGGAGACTAAGCCTTCCG
ACGATGAGAACAGTGACAACAGCAGTGAGTGTGTGGTGTGCCTGTCAGACTTGCGGGACACGCT
AATCCTGCCCTGCCGCCACTTGTGCCTCTGCACTTCCTGTGCTGACACGCTGCGGTACCAGGCC
AACAACTGCCCCATCTGCCGGCTGCCATTCCGAGCTCTCCTACAGATCCGGGCTGTACGGAAGA
AGCCAGGAGCTCTGTCTCCCATCTCCTTCAGTCCTGTCTTGGCCCAAAGTGTGGACCACGATGA
ACACTCTTGTCCCTTTAAAAAATCAAAGTCGCACCCTGCCTCCCTGGCCAGCAAGAAACCTAAA
AGGGAAACAAATTCTGACAGTGTCCCACCTGGCTATGAGCCCATCTCCTTGCTCGAGGCACTCA
ATGGACTACGGGCTGTCTCCCCGGCTATCCCATCAGCTCCCCTCTATGAGGAAATCACCTACTC
AGGCATCTCGGACGGTCTTTCCCAGGCCAGTTGTCCCCTTGCTGGACTCGATCGAATCATAGAA
AATGGAATACAGAAGGGCAAGACACAGAGCAAGTCTCCAGACAGCACCCTGCGGTCTCCATCAT
CTCCCATTCATGAGGAGGATGAGGAGAAGCTCTCAGAGGACCCGGAGGCTCCTCTCCCACCAAG
CGGTGTGGAGCTCGTGCTTCAGGAGAGCAGCTCCCCTGAGAGTTTCGGAACAGAGGAGGTGGGT
GAGCCATCCCTAAAGCAAGGAAGCCGAGTACCCTCTATTGATGATGTCCTGCAGGATGGCAGTC
CCCAGCATCATGGTTGCAGCCAGCCAGTCCCTCCTGCTGACATCTACCTACCAGCCCTGGGTCC
TGAGTCGTGCTCTGTTGGTATAGAGGAGTAAGCTGGATGGTCCACCTCCATGGAGACACACAGC
CTTGCCACCACCAGCTCCCCCTGGCCTCTGCTGAGTGGCTCTAGTCCCGAACCTGGAGCTTCTG
AGCTGACCCCTCTCTGAGAGTATGGCTCAGTGGGCAGCACAGAGCCCTCAGCATCCCAAACATT
GCCAGGAGACTCCCTGGACCCCAGCGAGACCCTGGCCTCTCCTGTCTGCACGCCTCATGTGGCC
ACTGGGATTTGAGGGGCCACAGGGAACCTTGATCCAATTGCACAGTGGGTTGTTCCTCCCCACA
CCCTCCTTTTTTATGGTCAATAGATTTGTAAATGGTACAAGATGAAGGACAGCAGCTGTCCCCA
TGGGCCACGAGCCCTAGAGGGACTCTCCCCAACTGTCAAAGCTGATGCTTTGAGCACTTAGCAA
ACCAGCATAAGAGAATCTACCCATGGACTGAAGTGTCATCCTCACAAACACTCTGGAAGGTGGG
CCGCCTAGGTTACGGTTATGAAGGAAACAATGCCTGTCTCATGTGACCCCAAGGCAGCCAGGCT
GTCATTGCTGCTTTCTTTCACCTTACAGATGTCCTGAGCATGGGTGACCCTCCTTGGAGCCTCC
AGGTCCCCTCCTGCTCTGCTCTACTACCCACTAGTGATCTCTGGCAGCTGTCCAGCTGAGGCAG
CTGAGGCAAGGCGGGGGTAGTCAGACTGTGTTAACACCACAGTCCTTTGCAGTGGTCAGTGTCC
AGTAGCCCTCACAGGTCCTGCTTCACTCACATCCTCACAGGCCTCCAAGATGGAGATGCTTGTG
CTTGCAGGGCAACACTGCCCACCACCTGCCAGGGACGAGCCTGAGCAGCTTCCACAGCACATCC
ATTGCCAGTTACCTGTCCTTTTACTTTCTTACCGATTTATTGTCTGAGGCTTCTGTCACAGGAT
CCTAGGGTCACTTGGTTTCTAAGGCAGAAGTAGCCCAAGGGTGGCCCCAGGGCAGAGATGCCCC
AGGCAATGCAGCTCCCTGGTCAGTTAGAGAGGGAAGTCAGCCCAAGGAGCTGCCCTGCCACTCA
CCCAGGTGACAGCCTGTAGCAATGCATGGAGACCCCTTTAGGCTCAGGGTTGCTTGAGCTCTGG
CTCTCCCCCTGCTCCTTCCTAGCAGTGACTGGCCTGGTCTCTGGTAAGCCTGTAAGCACAGTTC
TGTCTGCATATCCATCCGTATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTGAATGCACATATGTGCACACATGTCAGCATGTGCATGCCCACCCCTCACTTCTCACCT
GCCAACACCCTGGCGCCTGGTGCCAGTACTTTGAAAGATGGGATGCAGACTCCACACTTACCTG
TCTCAGATTCACATGTACTATCATTTGATGTACTGATTGGCTAGTTTGGGTTCATTTTTACTGT
ATATTTATAGTAATAAAATCATGCAGCAATA

hide sequence

RefSeq Acc Id:

XM_008767485 ⟹ XP_008765707

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,146,661 - 11,194,773 (-)	NCBI
mRatBN7.2	10	10,638,881 - 10,688,317 (-)	NCBI
Rnor_6.0	10	10,832,573 - 10,881,998 (-)	NCBI

Sequence:

show sequence

GCGGGGGCTGTGGAGAGGAGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGTACG
CGTCGGTGCGGCCTGGTCTGAGCCATGTCCGTGTGAGGACGCCGCAGCCGTCACCCCCTCCTCT
CCGGCTGGTCCGCAGAAACCCGCACCATGGGCTCCATCCTGAGTCGCCGCATCGCGGGCGTGGA
GGACATCGACATTCAGGCCAACTCGGCCTATCGTTACCCTCCGAAGTCCGGAAACTACTTTGCT
TCGCACTTTTTCATGGGAGGAGAGAAGTTTGACACTCCCCATCCTGAAGGTTACCTCTTTGGCG
AGAACATGGACCTGAACTTCCTGGGTAGTCGTCCAGTCCAGTTCCCCTATGTCACCCCTGCCCC
CCATGAGCCAGTGAAGACACTCAGGAGCCTGGTAAACATTCGCAAAGACTCTCTCCGGCTGGTG
AGGTACAAAGATGACACAGACAGCCCCACAGAGGACGGCGAGAAGCCCCGCGTGCTCTACAGTC
TGGAATTCACCTTTGATGCTGATGCCCGTGTGGCTATCACCATTTATTGCCAGGCAGTGGAGGA
GTTTGTCAACGGCATGACGGTGTACAGCTGTAAGAACCCTTCTCTGCAATCTGAGACTGTCCAT
TACAAGAGAGGCGTTAGCCAGCAGTTCTCCCTGCCTTCTTTCAAGATTGACTTCTCCGAGTGGA
AGGATGATGAGCTGAACTTTGACCTGGACCGGGGTGTGTTTCCAGTAGTCATCCAGGCTGTGGT
GGATGAAGGAGATGTTGTGGAAGTGACTGGCCACGCTCATGTGCTCTTGGCTGCCTTTGAGAAG
CACGTGGATGGCAGCTTCTCCGTGAAGCCATTAAAGCAGAAGCAAATTGTGGACCGGGTCAGCT
ACCTGCTGCAAGAGATCTACGGCATTGAGAACAAGAACAACCAGGAGACTAAGCCTTCCGACGA
TGAGAACAGTGACAACAGCAGTGAGTGTGTGGTGTGCCTGTCAGACTTGCGGGACACGCTAATC
CTGCCCTGCCGCCACTTGTGCCTCTGCACTTCCTGTGCTGACACGCTGCGGTACCAGGCCAACA
ACTGCCCCATCTGCCGGCTGCCATTCCGAGCTCTCCTACAGATCCGGGCTGTACGGAAGAAGCC
AGGAGCTCTGTCTCCCATCTCCTTCAGTCCTGTCTTGGCCCAAAGTGTGGACCACGATGAACAC
TCTTGTCCCTTTAAAAAATCAAAGTCGCACCCTGCCTCCCTGGCCAGCAAGAAACCTAAAAGGG
AAACAAATTCTGACAGTGTCCCACCTGGCTATGAGCCCATCTCCTTGCTCGAGGCACTCAATGG
ACTACGGGCTGTCTCCCCGGCTATCCCATCAGCTCCCCTCTATGAGGAAATCACCTACTCAGGC
ATCTCGGACGGTCTTTCCCAGGCCAGTTGTCCCCTTGCTGGACTCGATCGAATCATAGAAAATG
GAATACAGAAGGGCAAGACACAGAGCAAGTCTCCAGACAGCACCCTGCGGTCTCCATCATCTCC
CATTCATGAGGAGGATGAGGAGAAGCTCTCAGAGGACCCGGAGGCTCCTCTCCCACCAAGCGGT
GTGGAGCTCGTGCTTCAGGAGAGCAGCTCCCCTGAGAGTTTCGGAACAGAGGAGGTGGGTGAGC
CATCCCTAAAGCAAGGAAGCCGAGTACCCTCTATTGATGATGTCCTGCAGGATGGCAGTCCCCA
GCATCATGGTTGCAGCCAGCCAGTCCCTCCTGCTGACATCTACCTACCAGCCCTGGGTCCTGAG
TCGTGCTCTGTTGGTATAGAGGAGTAAGCTGGATGGTCCACCTCCATGGAGACACACAGCCTTG
CCACCACCAGCTCCCCCTGGCCTCTGCTGAGTGGCTCTAGTCCCGAACCTGGAGCTTCTGAGCT
GACCCCTCTCTGAGAGTATGGCTCAGTGGGCAGCACAGAGCCCTCAGCATCCCAAACATTGCCA
GGAGACTCCCTGGACCCCAGCGAGACCCTGGCCTCTCCTGTCTGCACGCCTCATGTGGCCACTG
GGATTTGAGGGGCCACAGGGAACCTTGATCCAATTGCACAGTGGGTTGTTCCTCCCCACACCCT
CCTTTTTTATGGTCAATAGATTTGTAAATGGTACAAGATGAAGGACAGCAGCTGTCCCCATGGG
CCACGAGCCCTAGAGGGACTCTCCCCAACTGTCAAAGCTGATGCTTTGAGCACTTAGCAAACCA
GCATAAGAGAATCTACCCATGGACTGAAGTGTCATCCTCACAAACACTCTGGAAGGTGGGCCGC
CTAGGTTACGGTTATGAAGGAAACAATGCCTGTCTCATGTGACCCCAAGGCAGCCAGGCTGTCA
TTGCTGCTTTCTTTCACCTTACAGATGTCCTGAGCATGGGTGACCCTCCTTGGAGCCTCCAGGT
CCCCTCCTGCTCTGCTCTACTACCCACTAGTGATCTCTGGCAGCTGTCCAGCTGAGGCAGCTGA
GGCAAGGCGGGGGTAGTCAGACTGTGTTAACACCACAGTCCTTTGCAGTGGTCAGTGTCCAGTA
GCCCTCACAGGTCCTGCTTCACTCACATCCTCACAGGCCTCCAAGATGGAGATGCTTGTGCTTG
CAGGGCAACACTGCCCACCACCTGCCAGGGACGAGCCTGAGCAGCTTCCACAGCACATCCATTG
CCAGTTACCTGTCCTTTTACTTTCTTACCGATTTATTGTCTGAGGCTTCTGTCACAGGATCCTA
GGGTCACTTGGTTTCTAAGGCAGAAGTAGCCCAAGGGTGGCCCCAGGGCAGAGATGCCCCAGGC
AATGCAGCTCCCTGGTCAGTTAGAGAGGGAAGTCAGCCCAAGGAGCTGCCCTGCCACTCACCCA
GGTGACAGCCTGTAGCAATGCATGGAGACCCCTTTAGGCTCAGGGTTGCTTGAGCTCTGGCTCT
CCCCCTGCTCCTTCCTAGCAGTGACTGGCCTGGTCTCTGGTAAGCCTGTAAGCACAGTTCTGTC
TGCATATCCATCCGTATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTGAATGCACATATGTGCACACATGTCAGCATGTGCATGCCCACCCCTCACTTCTCACCTGCCA
ACACCCTGGCGCCTGGTGCCAGTACTTTGAAAGATGGGATGCAGACTCCACACTTACCTGTCTC
AGATTCACATGTACTATCATTTGATGTACTGATTGGCTAGTTTGGGTTCATTTTTACTGTATAT
TTATAGTAATAAAATCATGCAGCAATA

hide sequence

RefSeq Acc Id:

XM_008767486 ⟹ XP_008765708

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,146,661 - 11,194,773 (-)	NCBI
mRatBN7.2	10	10,638,881 - 10,688,317 (-)	NCBI
Rnor_6.0	10	10,832,573 - 10,881,998 (-)	NCBI

Sequence:

show sequence

GCGGGGGCTGTGGAGAGGAGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGTACG
CGTCGGTGCGGCCTGGTCTGAGCCATGTCCGTGTGAGGACGCCGCAGCCGTCACCCCCTCCTCT
CCGGCTGGTCCGCAGAAACCCGCACCATGGGCTCCATCCTGAGTCGCCGCATCGCGGGCGTGGA
GGACATCGACATTCAGGCCAACTCGGCCTATCGTTACCCTCCGAAGTCCGGAAACTACTTTGCT
TCGCACTTTTTCATGGGAGGAGAGAAGTTTGACACTCCCCATCCTGAAGGTTACCTCTTTGGCG
AGAACATGGACCTGAACTTCCTGGGTAGTCGTCCAGTCCAGTTCCCCTATGTCACCCCTGCCCC
CCATGAGCCAGTGAAGACACTCAGGAGCCTGGTAAACATTCGCAAAGACTCTCTCCGGCTGGTG
AGGTACAAAGATGACACAGACAGCCCCACAGAGGACGGCGAGAAGCCCCGCGTGCTCTACAGTC
TGGAATTCACCTTTGATGCTGATGCCCGTGTGGCTATCACCATTTATTGCCAGGCAGTGGAGGA
GTTTGTCAACGGCATGACGGTGTACAGCTGTAAGAACCCTTCTCTGCAATCTGAGACTGTCCAT
TACAAGAGAGGCGTTAGCCAGCAGTTCTCCCTGCCTTCTTTCAAGATTGACTTCTCCGAGTGGA
AGGATGATGAGCTGAACTTTGACCTGGACCGGGGTGTGTTTCCAGTAGTCATCCAGGCTGTGGT
GGATGAAGGAGATGTTGTGGAAGTGACTGGCCACGCTCATGTGCTCTTGGCTGCCTTTGAGAAG
CACGTGGATGGCAGCTTCTCCGTGAAGCCATTAAAGCAGAAGCAAATTGTGGACCGGGTCAGCT
ACCTGCTGCAAGAGATCTACGGCATTGAGAACAAGAACAACCAGGAGACTAAGCCTTCCGACGA
TGAGAACAGTGACAACAGCAGTGAGTGTGTGGTGTGCCTGTCAGACTTGCGGGACACGCTAATC
CTGCCCTGCCGCCACTTGTGCCTCTGCACTTCCTGTGCTGACACGCTGCGGTACCAGGCCAACA
ACTGCCCCATCTGCCGGCTGCCATTCCGAGCTCTCCTACAGATCCGGGCTGTACGGAAGAAGCC
AGGAGCTCTGTCTCCCATCTCCTTCAGTCCTGTCTTGGCCCAAAGTGTGGACCACGATGAACAC
TCTAATTCTGACAGTGTCCCACCTGGCTATGAGCCCATCTCCTTGCTCGAGGCACTCAATGGAC
TACGGGCTGTCTCCCCGGCTATCCCATCAGCTCCCCTCTATGAGGAAATCACCTACTCAGGCAT
CTCGGACGGTCTTTCCCAGGCCAGTTGTCCCCTTGCTGGACTCGATCGAATCATAGAAAATGGA
ATACAGAAGGGCAAGACACAGAGCAAGTCTCCAGACAGCACCCTGCGGTCTCCATCATCTCCCA
TTCATGAGGAGGATGAGGAGAAGCTCTCAGAGGACCCGGAGGCTCCTCTCCCACCAAGCGGTGT
GGAGCTCGTGCTTCAGGAGAGCAGCTCCCCTGAGAGTTTCGGAACAGAGGAGGTGGGTGAGCCA
TCCCTAAAGCAAGGAAGCCGAGTACCCTCTATTGATGATGTCCTGCAGGATGGCAGTCCCCAGC
ATCATGGTTGCAGCCAGCCAGTCCCTCCTGCTGACATCTACCTACCAGCCCTGGGTCCTGAGTC
GTGCTCTGTTGGTATAGAGGAGTAAGCTGGATGGTCCACCTCCATGGAGACACACAGCCTTGCC
ACCACCAGCTCCCCCTGGCCTCTGCTGAGTGGCTCTAGTCCCGAACCTGGAGCTTCTGAGCTGA
CCCCTCTCTGAGAGTATGGCTCAGTGGGCAGCACAGAGCCCTCAGCATCCCAAACATTGCCAGG
AGACTCCCTGGACCCCAGCGAGACCCTGGCCTCTCCTGTCTGCACGCCTCATGTGGCCACTGGG
ATTTGAGGGGCCACAGGGAACCTTGATCCAATTGCACAGTGGGTTGTTCCTCCCCACACCCTCC
TTTTTTATGGTCAATAGATTTGTAAATGGTACAAGATGAAGGACAGCAGCTGTCCCCATGGGCC
ACGAGCCCTAGAGGGACTCTCCCCAACTGTCAAAGCTGATGCTTTGAGCACTTAGCAAACCAGC
ATAAGAGAATCTACCCATGGACTGAAGTGTCATCCTCACAAACACTCTGGAAGGTGGGCCGCCT
AGGTTACGGTTATGAAGGAAACAATGCCTGTCTCATGTGACCCCAAGGCAGCCAGGCTGTCATT
GCTGCTTTCTTTCACCTTACAGATGTCCTGAGCATGGGTGACCCTCCTTGGAGCCTCCAGGTCC
CCTCCTGCTCTGCTCTACTACCCACTAGTGATCTCTGGCAGCTGTCCAGCTGAGGCAGCTGAGG
CAAGGCGGGGGTAGTCAGACTGTGTTAACACCACAGTCCTTTGCAGTGGTCAGTGTCCAGTAGC
CCTCACAGGTCCTGCTTCACTCACATCCTCACAGGCCTCCAAGATGGAGATGCTTGTGCTTGCA
GGGCAACACTGCCCACCACCTGCCAGGGACGAGCCTGAGCAGCTTCCACAGCACATCCATTGCC
AGTTACCTGTCCTTTTACTTTCTTACCGATTTATTGTCTGAGGCTTCTGTCACAGGATCCTAGG
GTCACTTGGTTTCTAAGGCAGAAGTAGCCCAAGGGTGGCCCCAGGGCAGAGATGCCCCAGGCAA
TGCAGCTCCCTGGTCAGTTAGAGAGGGAAGTCAGCCCAAGGAGCTGCCCTGCCACTCACCCAGG
TGACAGCCTGTAGCAATGCATGGAGACCCCTTTAGGCTCAGGGTTGCTTGAGCTCTGGCTCTCC
CCCTGCTCCTTCCTAGCAGTGACTGGCCTGGTCTCTGGTAAGCCTGTAAGCACAGTTCTGTCTG
CATATCCATCCGTATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
GAATGCACATATGTGCACACATGTCAGCATGTGCATGCCCACCCCTCACTTCTCACCTGCCAAC
ACCCTGGCGCCTGGTGCCAGTACTTTGAAAGATGGGATGCAGACTCCACACTTACCTGTCTCAG
ATTCACATGTACTATCATTTGATGTACTGATTGGCTAGTTTGGGTTCATTTTTACTGTATATTT
ATAGTAATAAAATCATGCAGCAATA

hide sequence

RefSeq Acc Id:

XM_017597213 ⟹ XP_017452702

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,142,626 - 11,194,752 (-)	NCBI
mRatBN7.2	10	10,638,881 - 10,688,329 (-)	NCBI
Rnor_6.0	10	10,832,573 - 10,881,842 (-)	NCBI

Sequence:

show sequence

GGGCTCCATCCTGAGTCGCCGCATCGCGGGCGTGGAGGACATCGACATTCAGGCCAACTCGGCC
TATCGTTACCCTCCGAAGTCCGCTCTGGAGGCTACAGTCCTGGGCACATCTGACCTGGTAGCTG
CTTCCCTCCAGTCCGTGCCTGTATCTTCAACATTTTCTTTCCTCTGGGAAACTACTTTGCTTCG
CACTTTTTCATGGGAGGAGAGAAGTTTGACACTCCCCATCCTGAAGGTTACCTCTTTGGCGAGA
ACATGGACCTGAACTTCCTGGGTAGTCGTCCAGTCCAGTTCCCCTATGTCACCCCTGCCCCCCA
TGAGCCAGTGAAGACACTCAGGAGCCTGGTAAACATTCGCAAAGACTCTCTCCGGCTGGTGAGG
TACAAAGATGACACAGACAGCCCCACAGAGGACGGCGAGAAGCCCCGCGTGCTCTACAGTCTGG
AATTCACCTTTGATGCTGATGCCCGTGTGGCTATCACCATTTATTGCCAGGCAGTGGAGGAGTT
TGTCAACGGCATGACGGTGTACAGCTGTAAGAACCCTTCTCTGCAATCTGAGACTGTCCATTAC
AAGAGAGGCGTTAGCCAGCAGTTCTCCCTGCCTTCTTTCAAGATTGACTTCTCCGAGTGGAAGG
ATGATGAGCTGAACTTTGACCTGGACCGGGGTGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGA
TGAAGGAGATGTTGTGGAAGTGACTGGCCACGCTCATGTGCTCTTGGCTGCCTTTGAGAAGCAC
GTGGATGGCAGCTTCTCCGTGAAGCCATTAAAGCAGAAGCAAATTGTGGACCGGGTCAGCTACC
TGCTGCAAGAGATCTACGGCATTGAGAACAAGAACAACCAGGAGACTAAGCCTTCCGACGATGA
GAACAGTGACAACAGCAGTGAGTGTGTGGTGTGCCTGTCAGACTTGCGGGACACGCTAATCCTG
CCCTGCCGCCACTTGTGCCTCTGCACTTCCTGTGCTGACACGCTGCGGTACCAGGCCAACAACT
GCCCCATCTGCCGGCTGCCATTCCGAGCTCTCCTACAGATCCGGGCTGTACGGAAGAAGCCAGG
AGCTCTGTCTCCCATCTCCTTCAGTCCTGTCTTGGCCCAAAGTGTGGACCACGATGAACACTCT
TGTCCCTTTAAAAAATCAAAGTCGCACCCTGCCTCCCTGGCCAGCAAGAAACCTAAAAGGGAAA
CAAATTCTGACAGTGTCCCACCTGGCTATGAGCCCATCTCCTTGCTCGAGGCACTCAATGGACT
ACGGGCTGTCTCCCCGGCTATCCCATCAGCTCCCCTCTATGAGGAAATCACCTACTCAGGCATC
TCGGACGGTCTTTCCCAGGCCAGTTGTCCCCTTGCTGGACTCGATCGAATCATAGAAAATGGAA
TACAGAAGGGCAAGACACAGAGCAAGTCTCCAGACAGCACCCTGCGGTCTCCATCATCTCCCAT
TCATGAGGAGGATGAGGAGAAGCTCTCAGAGGACCCGGAGGCTCCTCTCCCACCAAGCGGTGTG
GAGCTCGTGCTTCAGGAGAGCAGCTCCCCTGAGAGTTTCGGAACAGAGGAGGTGGGTGAGCCAT
CCCTAAAGCAAGGAAGCCGAGTACCCTCTATTGATGATGTCCTGCAGGATGGCAGTCCCCAGCA
TCATGGTTGCAGCCAGCCAGTCCCTCCTGCTGACATCTACCTACCAGGATGGTCCACCTCCATG
GAGACACACAGCCTTGCCACCACCAGCTCCCCCTGGCCTCTGCTGAGTGGCTCTAGTCCCGAAC
CTGGAGCTTCTGAGCTGACCCCTCTCTGAGAGTATGGCTCAGTGGGCAGCACAGAGCCCTCAGC
ATCCCAAACATTGCCAGGAGACTCCCTGGACCCCAGCGAGACCCTGGCCTCTCCTGTCTGCACG
CCTCATGTGGCCACTGGGATTTGAGGGGCCACAGGGAACCTTGATCCAATTGCACAGTGGGTTG
TTCCTCCCCACACCCTCCTTTTTTATGGTCAATAGATTTGTAAATGGTACAAGATGAAGGACAG
CAGCTGTCCCCATGGGCCACGAGCCCTAGAGGGACTCTCCCCAACTGTCAAAGCTGATGCTTTG
AGCACTTAGCAAACCAGCATAAGAGAATCTACCCATGGACTGAAGTGTCATCCTCACAAACACT
CTGGAAGGTGGGCCGCCTAGGTTACGGTTATGAAGGAAACAATGCCTGTCTCATGTGACCCCAA
GGCAGCCAGGCTGTCATTGCTGCTTTCTTTCACCTTACAGATGTCCTGAGCATGGGTGACCCTC
CTTGGAGCCTCCAGGTCCCCTCCTGCTCTGCTCTACTACCCACTAGTGATCTCTGGCAGCTGTC
CAGCTGAGGCAGCTGAGGCAAGGCGGGGGTAGTCAGACTGTGTTAACACCACAGTCCTTTGCAG
TGGTCAGTGTCCAGTAGCCCTCACAGGTCCTGCTTCACTCACATCCTCACAGGCCTCCAAGATG
GAGATGCTTGTGCTTGCAGGGCAACACTGCCCACCACCTGCCAGGGACGAGCCTGAGCAGCTTC
CACAGCACATCCATTGCCAGTTACCTGTCCTTTTACTTTCTTACCGATTTATTGTCTGAGGCTT
CTGTCACAGGATCCTAGGGTCACTTGGTTTCTAAGGCAGAAGTAGCCCAAGGGTGGCCCCAGGG
CAGAGATGCCCCAGGCAATGCAGCTCCCTGGTCAGTTAGAGAGGGAAGTCAGCCCAAGGAGCTG
CCCTGCCACTCACCCAGGTGACAGCCTGTAGCAATGCATGGAGACCCCTTTAGGCTCAGGGTTG
CTTGAGCTCTGGCTCTCCCCCTGCTCCTTCCTAGCAGTGACTGGCCTGGTCTCTGGTAAGCCTG
TAAGCACAGTTCTGTCTGCATATCCATCCGTATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTGAATGCACATATGTGCACACATGTCAGCATGTGCATGCCCACCCCT
CACTTCTCACCTGCCAACACCCTGGCGCCTGGTGCCAGTACTTTGAAAGATGGGATGCAGACTC
CACACTTACCTGTCTCAGATTCACATGTACTATCATTTGATGTACTGATTGGCTAGTTTGGGTT
CATTTTTACTGTATATTTATAGTAATAAAATCATGCAGCAATA

hide sequence

RefSeq Acc Id:

XM_039085844 ⟹ XP_038941772

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,154,563 - 11,194,752 (-)	NCBI
mRatBN7.2	10	10,648,248 - 10,688,291 (-)	NCBI

RefSeq Acc Id:

XM_039085845 ⟹ XP_038941773

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,142,626 - 11,164,818 (-)	NCBI
mRatBN7.2	10	10,638,881 - 10,658,366 (-)	NCBI

RefSeq Acc Id:

XM_063268898 ⟹ XP_063124968

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,154,563 - 11,194,773 (-)	NCBI

RefSeq Acc Id:

XM_063268899 ⟹ XP_063124969

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,142,626 - 11,164,815 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001013986	(Get FASTA)	NCBI Sequence Viewer
	NP_001426630	(Get FASTA)	NCBI Sequence Viewer
	NP_001426631	(Get FASTA)	NCBI Sequence Viewer
	NP_001426632	(Get FASTA)	NCBI Sequence Viewer
	NP_001426633	(Get FASTA)	NCBI Sequence Viewer
	NP_001426634	(Get FASTA)	NCBI Sequence Viewer
	NP_001426635	(Get FASTA)	NCBI Sequence Viewer
	NP_001426636	(Get FASTA)	NCBI Sequence Viewer
	XP_006245854	(Get FASTA)	NCBI Sequence Viewer
	XP_006245855	(Get FASTA)	NCBI Sequence Viewer
	XP_006245856	(Get FASTA)	NCBI Sequence Viewer
	XP_006245857	(Get FASTA)	NCBI Sequence Viewer
	XP_006245858	(Get FASTA)	NCBI Sequence Viewer
	XP_008765707	(Get FASTA)	NCBI Sequence Viewer
	XP_008765708	(Get FASTA)	NCBI Sequence Viewer
	XP_017452702	(Get FASTA)	NCBI Sequence Viewer
	XP_038941772	(Get FASTA)	NCBI Sequence Viewer
	XP_038941773	(Get FASTA)	NCBI Sequence Viewer
	XP_063124968	(Get FASTA)	NCBI Sequence Viewer
	XP_063124969	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH83621	(Get FASTA)	NCBI Sequence Viewer
	CCC55240	(Get FASTA)	NCBI Sequence Viewer
	CCC55241	(Get FASTA)	NCBI Sequence Viewer
	EDL96278	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000004416
	ENSRNOP00000077703
	ENSRNOP00000095969
GenBank Protein	Q5XIQ4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001013986 ⟸ NM_001013964

- UniProtKB:

Q5XIQ4 (UniProtKB/Swiss-Prot), A0A8I6AKW4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGSILSRRIAGVEDIDIQANSAYRYPPKSAGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFL
GSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDAD
ARVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDELNFD
LDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYG
IENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLP
FRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSNSDSVPPGYEPISLLEALNGLRAVSPAI
PSAPLYEEITYSGISDGLSQASCPLAGLDRIIENGIQKGKTQSKSPDSTLRSPSSPIHEEDEEK
LSEDPEAPLPPSGVELVLQESSSPESFGTEEVGEPSLKQGSRVPSIDDVLQDGSPQHHGCSQPV
PPADIYLPALGPESCSVGIEE

hide sequence

RefSeq Acc Id:

XP_006245857 ⟸ XM_006245795

- Peptide Label:

isoform X4

- Sequence:

show sequence

MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFLG
SRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDADA
RVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDELNFDL
DRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGI
ENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPF
RALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSNSDSVPPGYEPISLLEALNGLRAVSPAIP
SAPLYEEITYSGISDGLSQASCPLAGLDRIIENGIQKGKTQSKSPDSTLRSPSSPIHEEDEEKL
SEDPEAPLPPSGVELVLQESSSPESFGTEEVGEPSLKQGSRVPSIDDVLQDGSPQHHGCSQPVP
PADIYLPGWSTSMETHSLATTSSPWPLLSGSSPEPGASELTPL

hide sequence

RefSeq Acc Id:

XP_006245855 ⟸ XM_006245793

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFLG
SRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDADA
RVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDELNFDL
DRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGI
ENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPF
RALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSCPFKKSKSHPASLASKKPKRETNSDSVPP
GYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAGLDRIIENGIQKGKTQS
KSPDSTLRSPSSPIHEEDEEKLSEDPEAPLPPSGVELVLQESSSPESFGTEEVGEPSLKQGSRV
PSIDDVLQDGSPQHHGCSQPVPPADIYLPGWSTSMETHSLATTSSPWPLLSGSSPEPGASELTP
L

hide sequence

RefSeq Acc Id:

XP_006245854 ⟸ XM_006245792

- Peptide Label:

isoform X1

- Sequence:

show sequence

MGSILSRRIAGVEDIDIQANSAYRYPPKSAGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFL
GSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDAD
ARVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDELNFD
LDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYG
IENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLP
FRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSCPFKKSKSHPASLASKKPKRETNSDSVP
PGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAGLDRIIENGIQKGKTQ
SKSPDSTLRSPSSPIHEEDEEKLSEDPEAPLPPSGVELVLQESSSPESFGTEEVGEPSLKQGSR
VPSIDDVLQDGSPQHHGCSQPVPPADIYLPGWSTSMETHSLATTSSPWPLLSGSSPEPGASELT
PL

hide sequence

RefSeq Acc Id:

XP_006245858 ⟸ XM_006245796

- Peptide Label:

isoform X5

- Sequence:

show sequence

MGSILSRRIAGVEDIDIQANSAYRYPPKSAGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFL
GSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDAD
ARVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDELNFD
LDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYG
IENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLP
FRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSCPFKKSKSHPASLASKKPKRETNSDSVP
PGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAGLDRIIENGIQKGKTQ
SKSPDSTLRSPSSPIHEEDEEKLSEDPEAPLPPSGVELVLQESSSPESFGTEEVGEPSLKQGSR
VPSIDDVLQDGSPQHHGCSQPVPPADIYLPALGPESCSVGIEE

hide sequence

RefSeq Acc Id:

XP_006245856 ⟸ XM_006245794

- Peptide Label:

isoform X3

- Sequence:

show sequence

MGSILSRRIAGVEDIDIQANSAYRYPPKSAGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFL
GSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDAD
ARVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDELNFD
LDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYG
IENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLP
FRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSNSDSVPPGYEPISLLEALNGLRAVSPAI
PSAPLYEEITYSGISDGLSQASCPLAGLDRIIENGIQKGKTQSKSPDSTLRSPSSPIHEEDEEK
LSEDPEAPLPPSGVELVLQESSSPESFGTEEVGEPSLKQGSRVPSIDDVLQDGSPQHHGCSQPV
PPADIYLPGWSTSMETHSLATTSSPWPLLSGSSPEPGASELTPL

hide sequence

RefSeq Acc Id:

XP_008765708 ⟸ XM_008767486

- Peptide Label:

isoform X8

- Sequence:

show sequence

MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFLG
SRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDADA
RVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDELNFDL
DRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGI
ENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPF
RALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSNSDSVPPGYEPISLLEALNGLRAVSPAIP
SAPLYEEITYSGISDGLSQASCPLAGLDRIIENGIQKGKTQSKSPDSTLRSPSSPIHEEDEEKL
SEDPEAPLPPSGVELVLQESSSPESFGTEEVGEPSLKQGSRVPSIDDVLQDGSPQHHGCSQPVP
PADIYLPALGPESCSVGIEE

hide sequence

RefSeq Acc Id:

XP_008765707 ⟸ XM_008767485

- Peptide Label:

isoform X6

- Sequence:

show sequence

MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFLG
SRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDADA
RVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDELNFDL
DRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGI
ENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPF
RALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSCPFKKSKSHPASLASKKPKRETNSDSVPP
GYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAGLDRIIENGIQKGKTQS
KSPDSTLRSPSSPIHEEDEEKLSEDPEAPLPPSGVELVLQESSSPESFGTEEVGEPSLKQGSRV
PSIDDVLQDGSPQHHGCSQPVPPADIYLPALGPESCSVGIEE

hide sequence

RefSeq Acc Id:	XP_017452702 ⟸ XM_017597213
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6AKW4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGGEKFDTPHPEGYLFGENMDLNFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKD DTDSPTEDGEKPRVLYSLEFTFDADARVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRG VSQQFSLPSFKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDG SFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCR HLCLCTSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSCPF KKSKSHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDG LSQASCPLAGLDRIIENGIQKGKTQSKSPDSTLRSPSSPIHEEDEEKLSEDPEAPLPPSGVELV LQESSSPESFGTEEVGEPSLKQGSRVPSIDDVLQDGSPQHHGCSQPVPPADIYLPGWSTSMETH SLATTSSPWPLLSGSSPEPGASELTPL hide sequence

Ensembl Acc Id:

ENSRNOP00000004416 ⟸ ENSRNOT00000004416

Ensembl Acc Id:

ENSRNOP00000071642 ⟸ ENSRNOT00000087118

RefSeq Acc Id:	XP_038941773 ⟸ XM_039085845
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_038941772 ⟸ XM_039085844
- Peptide Label:	isoform X9

Ensembl Acc Id:

ENSRNOP00000095969 ⟸ ENSRNOT00000095237

Ensembl Acc Id:

ENSRNOP00000078796 ⟸ ENSRNOT00000114301

Ensembl Acc Id:

ENSRNOP00000093009 ⟸ ENSRNOT00000096472

Ensembl Acc Id:

ENSRNOP00000077703 ⟸ ENSRNOT00000117920

RefSeq Acc Id:	XP_063124969 ⟸ XM_063268899
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063124968 ⟸ XM_063268898
- Peptide Label:	isoform X10

Protein Domains

RING-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5XIQ4-F1-model_v2	AlphaFold	Q5XIQ4	1-533	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696970

Promoter ID:

EPDNEW_R7495

Type:

multiple initiation site

Name:

Mgrn1_1

Description:

mahogunin ring finger 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	10,881,987 - 10,882,047	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311862	AgrOrtholog
BioCyc Gene	G2FUF-26048	BioCyc
Ensembl Genes	ENSRNOG00000003234	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000004416	ENTREZGENE
	ENSRNOT00000095237	ENTREZGENE
	ENSRNOT00000117920	ENTREZGENE
Gene3D-CATH	3.30.40.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7134018	IMAGE-MGC_LOAD
InterPro	MGRN1/RNF157-like	UniProtKB/Swiss-Prot
	Znf_RING	UniProtKB/Swiss-Prot
	Znf_RING/FYVE/PHD	UniProtKB/Swiss-Prot
KEGG Report	rno:302938	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:94393	IMAGE-MGC_LOAD
NCBI Gene	302938	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE MGRN1	UniProtKB/Swiss-Prot
	PTHR22996	UniProtKB/Swiss-Prot
Pfam	zf-C3HC4_3	UniProtKB/Swiss-Prot
PhenoGen	Mgrn1	PhenoGen
PROSITE	ZF_RING_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000003234	RatGTEx
SMART	RING	UniProtKB/Swiss-Prot
Superfamily-SCOP	RING/U-box	UniProtKB/Swiss-Prot
UniProt	A0A0G2K0Z6_RAT	UniProtKB/TrEMBL
	A0A8I5Y9P4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZLH3_RAT	UniProtKB/TrEMBL
	A0A8I6AKW4	ENTREZGENE
	A0A8I6GKG5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2Q0V6	ENTREZGENE, UniProtKB/TrEMBL
	D3ZEH9	ENTREZGENE, UniProtKB/TrEMBL
	G3C8Z1	ENTREZGENE, UniProtKB/TrEMBL
	MGRN1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-03-29	Mgrn1	mahogunin ring finger 1	Mgrn1	mahogunin ring finger 1, E3 ubiquitin protein ligase	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-10-05	Mgrn1	mahogunin ring finger 1, E3 ubiquitin protein ligase	Mgrn1	mahogunin, ring finger 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2007-10-02	Mgrn1	mahogunin, ring finger 1	RGD1311862	similar to mahogunin, ring finger 1; mahoganoid	Symbol and Name updated to reflect Human and Mouse nomenclature	1299863	PENDING
2005-12-06	RGD1311862	similar to mahogunin, ring finger 1; mahoganoid	RGD1311862_predicted	similar to mahogunin, ring finger 1; mahoganoid (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1311862_predicted	similar to mahogunin, ring finger 1; mahoganoid (predicted)	LOC302938_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC302938_predicted	similar to mahogunin, ring finger 1; mahoganoid (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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RGD Manual Annotations

Imported Annotations - KEGG (archival)