Ferry3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 4 | 161,458,942 - 161,494,213 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 159,772,693 - 159,809,322 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 159,772,786 - 159,806,382 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 166,002,577 - 166,036,177 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 161,785,490 - 161,819,090 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 160,419,525 - 160,453,125 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 159,483,089 - 159,518,387 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 159,483,131 - 159,515,447 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 232,094,496 - 232,130,704 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 163,322,116 - 163,355,524 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 163,567,583 - 163,600,371 (+) | NCBI | | | | | Celera | 4 | 148,488,701 - 148,522,329 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q42 | NCBI | | | | |
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FERRY3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 12 | 4,487,735 - 4,538,469 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 4,487,735 - 4,538,508 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 4,596,901 - 4,647,635 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 4,467,162 - 4,517,898 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 4,467,163 - 4,517,898 | NCBI | | | | | Celera | 12 | 6,218,946 - 6,269,682 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | p13.32 | NCBI | | | | | HuRef | 12 | 4,453,583 - 4,504,322 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 4,596,504 - 4,647,259 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 4,494,524 - 4,545,256 (-) | NCBI | | T2T-CHM13v2.0 | | |
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D6Wsu163e (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 6 | 126,916,938 - 126,952,667 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 126,916,925 - 126,952,930 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 126,939,966 - 126,975,704 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 126,939,962 - 126,975,967 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 126,889,984 - 126,925,722 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 126,905,585 - 126,941,323 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 128,619,339 - 128,654,595 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | F3 | NCBI | | | | | cM Map | 6 | 61.92 | NCBI | | | | |
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Ferry3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955413 | 2,298,970 - 2,335,237 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955413 | 2,298,514 - 2,335,308 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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FERRY3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 10 | 10,028,492 - 10,088,671 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 10,025,235 - 10,085,429 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 4,597,513 - 4,657,700 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 4,520,081 - 4,578,361 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 4,520,082 - 4,578,361 (-) | Ensembl | panpan1.1 | | panPan2 | |
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FERRY3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 27 | 40,341,944 - 40,388,424 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 40,343,672 - 40,388,031 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 6,293,535 - 6,340,061 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 40,697,404 - 40,743,959 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 40,697,459 - 40,743,955 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 40,586,483 - 40,633,008 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 40,611,429 - 40,658,003 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 5,704,065 - 5,750,596 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ferry3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404945 | 104,487,093 - 104,524,950 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936606 | 4,659,340 - 4,697,060 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936606 | 4,660,203 - 4,697,065 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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FERRY3 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 5 | 65,897,537 - 65,944,179 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 65,896,750 - 65,944,183 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 68,103,382 - 68,145,468 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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FERRY3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 4,515,097 - 4,559,859 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 4,514,783 - 4,560,030 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666063 | 3,682,325 - 3,727,567 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ferry3 (Heterocephalus glaber - naked mole-rat) |
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