Gene: C12orf4 (chromosome 12 open reading frame 4)
Homo sapiens |
| Symbol: |
C12orf4
|
| Name: |
chromosome 12 open reading frame 4
|
| Description: |
INTERACTS WITH 1-chloro-2,4-dinitrobenzene; 4-(ethoxymethylene)-2-phenyloxazol-5-one; benzo[a]pyrene |
| Type: |
protein-coding
|
| RefSeq Status: |
PREDICTED
|
| Also known as: |
FLJ21158; FLJ23899; hypothetical protein LOC57102; OTTHUMP00000238409; OTTHUMP00000238410; uncharacterized protein C12orf4
|
| Orthologs: |
Mus musculus : D6Wsu163e
(DNA segment, Chr 6, Wayne State University 163, expressed)
MGI
Rattus norvegicus : RGD1311164
(similar to DNA segment, Chr 6, Wayne State University 163, expressed)
|
| Latest Assembly: |
Human Genome Assembly GRCh37
|
| Position: |
| Map | Chr | Position | Strand | Source |
|---|
Human Alternate Assembly CHM1_1 | 12 | 4,527,328 - 4,579,072 | - | NCBI | Human Genome Assembly HuRef | 12 | 4,453,583 - 4,504,322 | - | NCBI | Human Genome Assembly GRCh37 | 12 | 4,596,901 - 4,647,637 | - | NCBI | Human Celera Assembly | 12 | 6,218,946 - 6,269,682 | - | NCBI | Human Genome Assembly Build 36 | 12 | 4,467,162 - 4,517,898 | - | NCBI | Human Cytogenetic Map | 12 | p13.3 | | NCBI | Human Genome Assembly | 12 | 4,467,163 - 4,517,898 | | NCBI |
|
| Model |
|
|
 Gene-Chemical Interaction Annotations
References - curated References - uncurated Genomics
Comparative Map Data
| C12orf4 (Homo sapiens) |
| Map | Chr | Position | Strand | Source |
|---|
Human Alternate Assembly CHM1_1 | 12 | 4,527,328 - 4,579,072 | - | NCBI | Human Genome Assembly HuRef | 12 | 4,453,583 - 4,504,322 | - | NCBI | Human Genome Assembly GRCh37 | 12 | 4,596,901 - 4,647,637 | - | NCBI | Human Celera Assembly | 12 | 6,218,946 - 6,269,682 | - | NCBI | Human Genome Assembly Build 36 | 12 | 4,467,162 - 4,517,898 | - | NCBI | Human Cytogenetic Map | 12 | p13.3 | | NCBI | Human Genome Assembly | 12 | 4,467,163 - 4,517,898 | | NCBI |
|
| D6Wsu163e (Mus musculus) |
| Map | Chr | Position | Strand | Source |
|---|
Mouse Genome Assembly GRCm38 | 6 | 126,939,966 - 126,975,704 | + | NCBI | Mouse cM Map | 6 | 61.92 | | NCBI | Mouse Celera Assembly | 6 | 128,619,339 - 128,654,595 | + | NCBI | Mouse Genome Assembly Build 37 | 6 | 126,889,984 - 126,925,722 | + | NCBI | Mouse Genome Assembly Build 36.1 | 6 | 126,889,984 - 126,925,722 | + | NCBI | Mouse Cytogenetic Map | 6 | F3 | | NCBI |
|
| RGD1311164 (Rattus norvegicus) |
| Map | Chr | Position | Strand | Source |
|---|
Rat Cytogenetic Map | 4 | q42 | | NCBI | RGSC Genome Assembly v5.0 | 4 | 232,097,436 - 232,130,662 | - | NCBI | RGSC Genome Assembly v3.4 | 4 | 163,322,116 - 163,355,524 | + | NCBI | Rat Celera Assembly | 4 | 148,488,701 - 148,522,329 | + | NCBI | Genome Assembly 3.1 | 4 | 163,567,583 - 163,600,371 | + | NCBI |
|
Position Markers
| WI-17772 |
| Map | Chr | Position | Strand | Source |
|---|
Human NCBI RH Map | 12 | 53.5 | | UniSTS | Human Whitehead-RH Map | 12 | 61.4 | | UniSTS | Human GeneMap99-GB4 RH Map | 12 | 25.03 | | UniSTS | Human Genome Assembly HuRef | 12 | 4,453,874 - 4,453,999 | | UniSTS | Human Genome Assembly GRCh37 | 12 | 4,597,192 - 4,597,317 | | UniSTS | Human Celera Assembly | 12 | 6,219,237 - 6,219,362 | | RGD | Human Genome Assembly Build 36 | 12 | 4,467,453 - 4,467,578 | | RGD | Human Cytogenetic Map | 12 | p13.3 | | UniSTS |
|
| WI-15553 |
| Map | Chr | Position | Strand | Source |
|---|
Human NCBI RH Map | 12 | 53.5 | | UniSTS | Human Whitehead-RH Map | 12 | 61.4 | | UniSTS | Human GeneMap99-GB4 RH Map | 12 | 25.03 | | UniSTS | Human Genome Assembly HuRef | 12 | 4,453,611 - 4,453,735 | | UniSTS | Human Genome Assembly GRCh37 | 12 | 4,596,929 - 4,597,053 | | UniSTS | Human Celera Assembly | 12 | 6,218,974 - 6,219,098 | | RGD | Human Genome Assembly Build 36 | 12 | 4,467,190 - 4,467,314 | | RGD | Human Cytogenetic Map | 12 | p13.3 | | UniSTS |
|
| RH66493 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 12 | 4,485,397 - 4,485,520 | | UniSTS | Human Genome Assembly GRCh37 | 12 | 4,628,716 - 4,628,839 | | UniSTS | Human Celera Assembly | 12 | 6,250,761 - 6,250,884 | | RGD | Human Genome Assembly Build 36 | 12 | 4,498,977 - 4,499,100 | | RGD | Human Cytogenetic Map | 12 | p13.3 | | UniSTS |
|
| WI-17773 |
| Map | Chr | Position | Strand | Source |
|---|
Human NCBI RH Map | 12 | 75.7 | | UniSTS | Human Whitehead-RH Map | 12 | 59.6 | | UniSTS | Human GeneMap99-GB4 RH Map | 12 | 29.15 | | UniSTS | Human Genome Assembly HuRef | 12 | 4,455,457 - 4,455,606 | | UniSTS | Human Genome Assembly GRCh37 | 12 | 4,598,775 - 4,598,924 | | UniSTS | Human Celera Assembly | 12 | 6,220,820 - 6,220,969 | | RGD | Human Genome Assembly Build 36 | 12 | 4,469,036 - 4,469,185 | | RGD | Human Cytogenetic Map | 12 | p13.3 | | UniSTS |
|
| MARC_15597-15598:1013621652:1 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 12 | 4,455,556 - 4,456,418 | | UniSTS | Human Genome Assembly GRCh37 | 12 | 4,598,874 - 4,599,736 | | UniSTS | Human Celera Assembly | 12 | 6,220,919 - 6,221,781 | | RGD | Human Genome Assembly Build 36 | 12 | 4,469,135 - 4,469,997 | | RGD |
|
QTLs in Region (Human Genome Assembly GRCh37)
| 1298480 | RA20_H | Rheumatoid arthritis QTL 20 (human) | | .0031 | Joint/bone inflammation | rheumatoid arthritis | 12 | 4015103 | 30015103 | Human | | 1300028 | BP53_H | Blood pressure QTL 53 (human) | 1.33 | .00673 | Blood pressure | systolic | 12 | 1 | 16587449 | Human | | 1559357 | BW81_H | Body weight QTL 81 (human) | 1.89 | .005 | Body weight | body mass index | 10 | 1 | 21157708 | Human | | 1559345 | BW82_H | Body weight QTL 82 (human) | 1.83 | .006 | Body weight | body mass index | 12 | 1 | 21157708 | Human | | 1559259 | SCL46_H | Serum cholesterol level QTL 46 (human) | 3.7 | .0001 | Lipid level | total cholesterol | 12 | 3587537 | 13606455 | Human | | 2289486 | BW248_H | Body weight QTL 248 (human) | 1.86 | | Body weight | body mass index | 12 | 1 | 13661478 | Human | | 1643086 | BW160_H | Body weight QTL 160 (human) | | .0226 | Body weight | BMI | 12 | 4015103 | 30015103 | Human | | 1643279 | BW192_H | Body weight QTL 192 (human) | | .0128 | Body weight | BMI | 12 | 1 | 21157708 | Human | | 2289607 | BW475_H | Body weight QTL 475 (human) | 1.6 | | Body morphometry | waist to hip ratio | 12 | 1 | 13661478 | Human | | 2293480 | PRSTS284_H | Prostate tumor susceptibility QTL 284 (human) | | | Prostate tumor susceptibility | | 12 | 1 | 16991805 | Human | | 2293467 | PRSTS304_H | Prostate tumor susceptibility QTL 304 (human) | | .032 | Prostate tumor susceptibility | | 12 | 1 | 16991805 | Human | | 2299959 | PRSTS329_H | Prostate tumor susceptibility QTL 329 (human) | 1.55 | .0038 | Prostate tumor susceptibility | | 12 | 1 | 16587449 | Human | | 2300115 | PRSTS336_H | Prostate tumor susceptibility QTL 336 (human) | | | Prostate tumor susceptibility | | 12 | 1 | 16587449 | Human | |
