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Gene: Rreb1 (ras responsive element binding protein 1) Rattus norvegicus

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Symbol:

Rreb1

Name:

ras responsive element binding protein 1

RGD ID:

1310904

Description:

Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including positive regulation of brown fat cell differentiation; positive regulation of cell migration; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of DNA-templated transcription. Predicted to be located in fibrillar center and nuclear speck. Predicted to be active in nucleus. Orthologous to human RREB1 (ras responsive element binding protein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; atrazine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC306873; ras-responsive element-binding protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RREB1 (ras responsive element binding protein 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Rreb1 (ras responsive element binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rreb1 (ras responsive element binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RREB1 (ras responsive element binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RREB1 (ras responsive element binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rreb1 (ras responsive element binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RREB1 (ras responsive element binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RREB1 (ras responsive element binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rreb1 (ras responsive element binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Rreb1 (ras responsive element binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	RREB1 (ras responsive element binding protein 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rreb1 (ras responsive element binding protein 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rreb1a (ras responsive element binding protein 1a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rreb1b (ras responsive element binding protein 1b)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	peb	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	peb	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rreb1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rreb1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	27,082,217 - 27,208,061 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	27,082,227 - 27,208,061 (-)	Ensembl				GRCr8
mRatBN7.2	17	26,876,687 - 27,002,554 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	26,876,697 - 27,002,615 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	26,734,931 - 26,860,866 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	28,338,506 - 28,464,419 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	26,683,567 - 26,809,800 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	27,539,137 - 27,718,878 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	27,539,133 - 27,665,266 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	29,453,342 - 29,632,680 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	33,125,272 - 33,251,491 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	26,508,633 - 26,634,463 (-)	NCBI		Celera
RGSC_v3.1	17	33,130,948 - 33,187,331 (-)	NCBI
Cytogenetic Map	17	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amenorrhea (ISO)

Desbuquois dysplasia (ISO)

microcephaly (ISO)

RASopathy (ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-trinitrobenzenesulfonic acid (ISO)

2-hydroxypropanoic acid (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

caffeine (ISO)

cisplatin (ISO)

clofibrate (ISO)

corosolic acid (ISO)

coumarin (ISO)

crocidolite asbestos (ISO)

curcumin (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

dichloroacetic acid (ISO)

dichloromethane (ISO)

dicrotophos (ISO)

diethylstilbestrol (ISO)

dorsomorphin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

fenthion (ISO)

folic acid (ISO)

formaldehyde (ISO)

fulvestrant (ISO)

glutathione (EXP)

GSK-J4 (ISO)

hexadecanoic acid (ISO)

hydrogen chloride (ISO)

hydrogen cyanide (ISO)

inulin (ISO)

leflunomide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N-methyl-4-phenylpyridinium (ISO)

nimesulide (EXP)

oxaliplatin (EXP)

panobinostat (ISO)

paracetamol (EXP,ISO)

pentachlorophenol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

potassium cyanide (ISO)

rac-lactic acid (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

trichostatin A (ISO)

troglitazone (ISO)

tungsten (ISO)

valproic acid (ISO)

vorinostat (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of DNA-templated transcription (ISO)

negative regulation of transcription by RNA polymerase II (IEA,ISO)

positive regulation of brown fat cell differentiation (IEA,ISO)

positive regulation of developmental process (IEA)

positive regulation of epithelial cell migration (IEA,ISO)

positive regulation of lamellipodium morphogenesis (IEA,ISO)

positive regulation of mammary gland epithelial cell proliferation (IEA,ISO)

positive regulation of substrate adhesion-dependent cell spreading (IEA,ISO)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

positive regulation of wound healing, spreading of epidermal cells (IEA,ISO)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

nuclear speck (IEA,ISO)

nucleus (IBA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IBA,IEA,ISO)

DNA-binding transcription factor activity (IEA,ISO)

metal ion binding (IEA)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,IEA,ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IEA,ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8816445	PMID:12477932	PMID:18394891	PMID:19056867	PMID:20133935	PMID:21159816	PMID:27923061

Genomics

Comparative Map Data

Rreb1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	27,082,217 - 27,208,061 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	27,082,227 - 27,208,061 (-)	Ensembl				GRCr8
mRatBN7.2	17	26,876,687 - 27,002,554 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	26,876,697 - 27,002,615 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	26,734,931 - 26,860,866 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	28,338,506 - 28,464,419 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	26,683,567 - 26,809,800 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	27,539,137 - 27,718,878 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	27,539,133 - 27,665,266 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	29,453,342 - 29,632,680 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	33,125,272 - 33,251,491 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	26,508,633 - 26,634,463 (-)	NCBI		Celera
RGSC_v3.1	17	33,130,948 - 33,187,331 (-)	NCBI
Cytogenetic Map	17	p12	NCBI

RREB1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	7,107,743 - 7,251,980 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	7,107,418 - 7,251,982 (+)	Ensembl			hg38	GRCh38
GRCh37	6	7,107,976 - 7,252,213 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	7,053,263 - 7,196,194 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	7,084,476 - 7,196,194	NCBI
Celera	6	8,337,583 - 8,481,974 (+)	NCBI		Celera
Cytogenetic Map	6	p24.3	NCBI
HuRef	6	6,984,113 - 7,128,514 (+)	NCBI		HuRef
CHM1_1	6	7,109,932 - 7,254,330 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	6,977,349 - 7,121,600 (+)	NCBI		T2T-CHM13v2.0

Rreb1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	37,962,362 - 38,135,981 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	37,962,376 - 38,135,981 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	37,778,382 - 37,952,005 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	37,778,400 - 37,952,005 (+)	Ensembl			mm10	GRCm38
MGSCv37	13	37,917,907 - 38,043,874 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	37,833,505 - 37,959,468 (+)	NCBI		MGSCv36	mm8
Celera	13	38,946,939 - 39,073,602 (+)	NCBI		Celera
Cytogenetic Map	13	A3.3	NCBI
cM Map	13	17.7	NCBI

Rreb1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955465	6,570,522 - 6,636,934 (-)	Ensembl
ChiLan1.0	NW_004955465	6,572,593 - 6,757,423 (-)	NCBI	ChiLan1.0	ChiLan1.0

RREB1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	21,747,574 - 21,892,126 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	17,744,041 - 17,888,548 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	6,945,205 - 7,089,757 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	7,160,933 - 7,356,556 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	7,257,875 - 7,356,544 (+)	Ensembl			panPan2	panpan1.1

RREB1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	7,120,505 - 7,255,290 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	35	7,120,472 - 7,255,105 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	35	7,123,955 - 7,258,737 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	35	7,202,128 - 7,337,072 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	35	7,190,064 - 7,334,484 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	35	7,055,626 - 7,190,320 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	35	7,082,329 - 7,217,217 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	35	8,414,770 - 8,549,540 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rreb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	17,052,502 - 17,233,119 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936534	5,324,430 - 5,385,707 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936534	5,321,488 - 5,390,612 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RREB1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	7	4,512,286 - 4,639,961 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	4,478,004 - 4,652,467 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RREB1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	64,938,831 - 65,084,975 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	64,938,800 - 65,009,057 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	7,066,464 - 7,212,615 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rreb1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624756	18,259,884 - 18,382,648 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624756	18,259,884 - 18,383,344 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Rreb1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	56,867,439 - 56,991,639 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Rreb1
731 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	309
Count of miRNA genes:	205
Interacting mature miRNAs:	234
Transcripts:	ENSRNOT00000060218
Prediction methods:	Miranda, Pita
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354581	Bp247	Blood pressure QTL 247	4.5		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	17	1	43999106	Rat
2300002	Iddm36	Insulin dependent diabetes mellitus QTL 36	1.98		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	17	9266755	40968173	Rat
2293664	Bmd28	Bone mineral density QTL 28	5.1	0.0001	femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	17	4360057	27233623	Rat
8552966	Pigfal18	Plasma insulin-like growth factor 1 level QTL 18	8.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	17	12860942	57860942	Rat
152023626	Bp403	Blood pressure QTL 403	3.86		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
1300123	Bp194	Blood pressure QTL 194	2.82		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	2120843	42054133	Rat
2302377	Scl61	Serum cholesterol level QTL 61	4.36		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	17	6221998	58177198	Rat
70157	Niddm32	Non-insulin dependent diabetes mellitus QTL 32	4.34		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	17	22660799	55604694	Rat
9589151	Insul30	Insulin level QTL 30	8.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	17	12860942	57860942	Rat
1354628	Stl13	Serum triglyceride level QTL 13	3.8		blood triglyceride amount (VT:0002644)	blood triglyceride level (CMO:0000118)	17	21498994	50592236	Rat
10401807	Kidm52	Kidney mass QTL 52			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	17	1	31706603	Rat
10054088	Scort28	Serum corticosterone level QTL 28	2.04	0.0102	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	4733534	49733534	Rat
61394	Bp8	Blood pressure QTL 8	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	23286322	64246472	Rat
9589057	Scfw6	Subcutaneous fat weight QTL 6	8.62	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	17	12860942	57860942	Rat
2317045	Aia11	Adjuvant induced arthritis QTL 11	4.06		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	17	26522051	71522051	Rat
9590154	Scort9	Serum corticosterone level QTL 9	23.57	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	12860942	57860942	Rat
10450503	Bp386	Blood pressure QTL 386		0.28	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	22019705	67019705	Rat
1559055	Bp278	Blood pressure QTL 278		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	23858926	68858926	Rat
152025238	Slep14	Serum leptin concentration QTL 14	4.62		blood leptin amount (VT:0005667)		17	24390595	84432719	Rat
9590088	Insglur7	Insulin/glucose ratio QTL 7	20.38	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	17	12860942	57860942	Rat
1331720	Rf43	Renal function QTL 43	2.881		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	17	15537025	28637951	Rat
2317053	Aia25	Adjuvant induced arthritis QTL 25	2.69		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	17	10604694	55604694	Rat
1354613	Kidm14	Kidney mass QTL 14	6.2		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	17	1	36045694	Rat
1331765	Hrtrt15	Heart rate QTL 15	4.094		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	17	15537025	60531414	Rat
7411666	Foco31	Food consumption QTL 31	11.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	17	12860942	57860942	Rat
2303627	Vencon8	Ventilatory control QTL 8		0.001	respiration trait (VT:0001943)	tidal volume (CMO:0000222)	17	4733534	49733534	Rat
12903980	Cm120	Cardiac mass QTL 120		0.002	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	17	23858926	68858926	Rat
70184	BpQTLcluster14	Blood pressure QTL cluster 14	3.38		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	8574342	32199534	Rat
12903981	Am17	Aortic mass QTL 17		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	17	23858926	68858926	Rat
12903982	Kidm70	Kidney mass QTL 70		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	17	23858926	68858926	Rat
631207	Niddm41	Non-insulin dependent diabetes mellitus QTL 41			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	17	1	38037084	Rat
12903978	Cm118	Cardiac mass QTL 118		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	17	23858926	68858926	Rat
12903979	Cm119	Cardiac mass QTL 119		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	17	23858926	68858926	Rat
1354662	Rf49	Renal function QTL 49	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	17	1	43999106	Rat
2293648	Bmd31	Bone mineral density QTL 31	4.5	0.0001	femur size trait (VT:1000369)	femoral neck cortical cross-sectional area (CMO:0001702)	17	4360057	27233623	Rat
152023740	Bp406	Blood pressure QTL 406	6.06		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
7488966	Bp370	Blood pressure QTL 370		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	23858926	68858926	Rat
1354658	Spl8	Serum phospholipid level QTL 8	3.8		blood VLDL phospholipid amount (VT:0010507)	blood very low density lipoprotein phospholipid level (CMO:0001571)	17	1	43999106	Rat
152023737	Bp405	Blood pressure QTL 405	5.06		arterial blood pressure trait (VT:2000000)			24136127	84432719	Rat
152023736	Bp404	Blood pressure QTL 404	3.78		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat

Markers in Region

RH133262

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	26,974,053 - 26,974,269 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	27,636,466 - 27,636,681	NCBI	Rnor6.0
Rnor_5.0	17	29,550,684 - 29,550,899	UniSTS	Rnor5.0
RGSC_v3.4	17	33,222,933 - 33,223,148	UniSTS	RGSC3.4
Celera	17	26,606,022 - 26,606,237	UniSTS
RH 3.4 Map	17	341.4	UniSTS
Cytogenetic Map	17	p12	UniSTS

AA859655

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	26,876,810 - 26,877,000 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	27,539,262 - 27,539,451	NCBI	Rnor6.0
Rnor_5.0	17	29,453,467 - 29,453,656	UniSTS	Rnor5.0
RGSC_v3.4	17	33,125,397 - 33,125,586	UniSTS	RGSC3.4
Celera	17	26,508,758 - 26,508,947	UniSTS
RH 3.4 Map	17	353.3	UniSTS
Cytogenetic Map	17	p12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
23	12	79	198	91	90	59	126	59	6	433	241	14	182	102	106	31	28	28

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253812	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771571	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC090027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222841	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000060218 ⟹ ENSRNOP00000056967

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	27,082,227 - 27,208,061 (-)	Ensembl
mRatBN7.2 Ensembl	17	26,876,697 - 27,002,615 (-)	Ensembl
Rnor_6.0 Ensembl	17	27,539,148 - 27,665,266 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000079298 ⟹ ENSRNOP00000073072

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	27,082,227 - 27,208,061 (-)	Ensembl
mRatBN7.2 Ensembl	17	26,876,697 - 27,002,615 (-)	Ensembl
Rnor_6.0 Ensembl	17	27,539,133 - 27,602,934 (-)	Ensembl

RefSeq Acc Id:

NM_001107348 ⟹ NP_001100818

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	27,082,217 - 27,208,061 (-)	NCBI
mRatBN7.2	17	26,876,687 - 27,002,554 (-)	NCBI
Rnor_6.0	17	27,539,137 - 27,665,266 (-)	NCBI
Rnor_5.0	17	29,453,342 - 29,632,680 (-)	NCBI
RGSC_v3.4	17	33,125,272 - 33,251,491 (-)	RGD
Celera	17	26,508,633 - 26,634,463 (-)	RGD

Sequence:

show sequence

CTCGTTCTGCCGCGGCTGCTGCGGCAGCTCTGTAACACGTCCCTAGGAGACTCGCAGGAGCAAC
ACGTGATGTGTCTACTTATCAGGGTGAGAGGGGGAGAGCGAGTCTCCGAGCGTGCGGGGGAAGT
GACTGCGGAGTTGATGAACTTTGCACATCCAGAAACGCCATTTTGATTCCTTTTCCGGAACAAG
TTTGCATGTCTCCTCGTTCTCAGCCCGAAGCCCACCGGTCCCCACCGCATCATGCCTGGGAGCC
CAGCACCCTGCCGGGCCGTTGTTCCAACTCTGCTCCAGAAGTGGTGGCTTTGAAGTGTGACCCT
GCCCACATTTGGGCCCAGTCCTTGTCAGCTTCTCAGTAGAACGAAGAAAACAGTGTAAAGGAGT
GGTACCGAGGGAAGCACAGGGCTCAGTAGAGCCATTTCCTACCCCATGTGGATGACAGCCGCAG
CAAGGGACTATCACTTGGGGCAGAAAATGGAGTTCTATAGTGGAGACTTCTTAGAAGCATAAAA
CCCCGTCCCGATGACGTCAAATCCGCCCACTGGTTTAGAAGGCTCAGACCTGTCTTCCGTCAAC
ACCATGATGTCAGCAGTAATGAGTATATCGAGTGTCACTGAGAATGGTGGGAGCCCCCAGGGCA
TCAAGTCCCCCATGAAGCCTCCAGGACCAAATCGCATTGGCAGAAGGAACCAGGAAACGAAAGA
GGAGAAGTCTTCCTACAACTGTCCCCTATGTGAAAAGGTCTGCACTACCCAGCACCAGCTGACC
ATGCACATCCGTCAGCACAACACAGACACTGGAGGAGCTGACCACTCATGCAGCATCTGTGGGA
AGTCGCTGAGCTCTGCCAGCTCCCTGGATCGTCACATGCTGGTGCACTCTGGCGAGAGGCCTTA
CAAGTGCACAGTGTGTGGCCAGTCGTTCACCACCAATGGCAACATGCACAGACATATGAAGATT
CATGAGAAGGATACCAACAGTACTACAGCTGCAGCCCCTCCGTCCCCTCTGAAGCGTAGGCGGT
TGTCCTCCAAAAGGAAACTGAGTCACGATGCCGAGTCAGAAAGAGAAGACCCAGGACCAGCTAA
AAAGACGGTTGAAGACGGGCAGTCCAGTGGCTTGGACAAGATGGCCGATGAAACCTTTCACTGC
CCGGTGTGTTTCAAGGAGTTTGTTTGCAAGTATGGACTGGAGACCCACATGGAGACTCATTCAG
ATAACCCATTGAGATGTGACATTTGCTGTGTCACCTTCCGCACACATCGAGGACTACTGCGTCA
CAATGCGCTTGTCCACAAGCAGCTTCCCAGAGATGCCATGGGAAGGCCTTTTATCCAGAACAAT
CCTTCCATTCCTGCTGGCTTCCATGACCTAGGGTTCACCGACTTCTCCTGTAGGAAGTTCCCTC
GGATCTCTCAGGCCTGGTGTGAAACAAACCTGCGTCGGTGCATCAGCGAGCAGCACCGCTTTGT
GTGTGACACCTGCGACAAGGCGTTCCCCATGCTGTCGTCACTCATCCTGCATAGGCAGACCCAC
ATCCCTGCCGATCAGGGACGGGAGAAGCTCCAGACTAAGACCCTGGCTGCTGATACCTTGGACC
AGAAGGTCTTCCTGGCCTTCCTAGGCCTGCAGCACACCAAAGACGTGAAGCCTGCACCTGCTGA
GGAGCTCCTGCCAGACGACAGCCATACAATACAGCTCCAGACACTCAAGTGTCAGCTACCTCAG
GACCCTGGCTGCACCAATGTGCTGAGTCTGTCTCCTTTTGAAGCGGCTTCTTTAGGTGGTTCTC
TAACAGTCCTCCCAGCCACAAAGGAGAATATGAAGCATCTGTCCCTGCAGCCCTTCCAGAAGGG
CTTCATCATCCAGCCAGACAGTAGTATTGTGGTTAAGCCTATTTCAGGAGAGTCGGCCATTGAG
CTGGCAGATATCCAGCAGATTCTAAAGATGGCAGCTTCTGCTCCTCCACAGATCAGTCTTCCGC
CACTTTCCAAGGCTCCTGCCACCCCTCTGCAGGCAATTTTCAAGCACATGCCTCCCTTGAAGCC
AAAGCCCTTGGTCGCACCCCGGACAGTGGTAGCTGCCTCCACACCCCCTCCTCTCATCAATGCA
CAGCAGGCATCCCCGGGTTGTATCAGCCCTAGCCTTCCGCCACAGTCCCTGAAGTTCCTCAAGG
GGTCTGTGGAGGCAGTCTCCAGTGCCCATCTGCTACAGTCCAAGTCCGGGATCCAGCCAAACAC
CAGCACACAGCTCTTCCTGCAGCAGCCTGGGGTGGAGTTACCAGGCCAGGCCGAGATGAAAGCC
CAGCTGGAGCAGGACAGCATCATTGAGGCCTTGCTGCCCCTAAACATGGAGGCGAAGATCAAGC
AGGAGATAACAGAAGGTGACCTCAAGGCCATCATGACAGGCCCCAGTGGCAAGAAGACCCCCGC
CATGCGCAAGGTGCTCTACCCCTGCCGCTTCTGTAACCAGGTGTTTGCCTTCTCTGGAGTCCTG
CGAGCCCACGTCCGCTCCCACCTGGGCATCTCGCCCTACCAGTGCAACATCTGTGACTACATCG
CCGCAGACAAAGCTGCTCTCATCCGCCACCTCCGCACGCACAGCGGGGAGCGGCCGTACATCTG
CAAGATCTGCCACTACCCGTTCACCGTCAAAGCCAACTGTGAGCGGCACCTGCGCAAGAAGCAC
CTCAAGGCCACCAGGAAGGACATTGAGAAGAACATACAGTACGTGAGCAGCAGCACGGCTGAGC
TGGTGGATGCCCTCTGCTCCCCGGAGACCGTGTGCAGGCTGTGCGGTGAGGATCTGAAGCACTA
CCGCGCCCTGCGCATTCACATGCGCACGCACTGCAGCCGTGGCCTGGGTGGCTGCCACAAAGGC
CGGAAACCCTTCGAGTGCAAGGAATGCAACGCCGCCTTCGCGGCCAAGCGCAACTGCATCCACC
ACATCCTCAAGCAGCACCTGCACGTGCCCGAGAAAGACATTGAGAGCTACGTGCTGGCCACCGA
CGCCGGCCTTGGCCCCGCAGACACGGCCGCAGAGGCCTCTTCCAGAGAAGAGAGCAGCTGTGTC
ACTTTCGCCGAGTGCAAGCCCCTCACCACTTTCCTGGAGCCCCAAAATGGCTTTCTTCACTCGA
GCCCCACCCAGCCCCTGCCTTCCCACATCTCTGTCAAGTTGGAGCCGGCCAGCAGCTTTGCAAC
AGACTTCAACGAACCCCTTGACTTTTCGCAGAAAGGCCTGGCACTGGTCCAAGTGAAGCAGGAA
AATATGTCCTCCTTGCTGAATTCTTCCTCCTCCTCTGCCCTCTATGACTGCTCCATGGAGCCCA
TTGATCTGTCCATCCCCAAGAGCGGAAAGAGAGGAGACAAGGACACAGTTGTTTCCAGCGACGC
CAAGAAACCAGAACCAGAAGCTGGGAAAGCTGAGCAGCTCTCTCCCCATCCGCCACCCTGCCCT
ACCTTGTCAGTGACTGTGGAGCCCAAAGGGAGCCTGGACAACCCAGCAGGCACTGTGGTGGCCG
TCACCACGGCTGCCAAGCTGGAGCCCCACACCCAGCCCCTCCAGGGCTCTGTGCAGCTGGCTGT
CCCCATCTACTCCTCAGCTCTCATCAGCAATGCTCCCCTCTTGGGCAGCTCCGCCCTCCTGAAC
AGCGCGTCCTTGCTTCGGCCCTTACGGCCAAAGCCTCCCCTCCTCTTGCCAAAGCCCGCGATGA
CAGAGGAGCTGCCGCCACTGGCCTCCATTGCGCAGATCATCTCCTCTGTGTCCTCGGCTCCTAC
TCTGCTGAAAACGAAGGCAGCTGACCCCGGGCCGTCGAGCACCAGCAGTAACGCTGTGGCCACA
GACAGCCCAGGAGGCTCCATCCCCAAGGCCTCCCCTAGCCCCACAGACATCCCAAGCTCGAGAG
AACCCACTGACCCAGCCCCTACAGCCAGCAGCCCCGAGGAAGCCTCGCCTCCTGAACAAGGGCC
GGCTGCCTCATCCAGGAAGAGGGGCAGGAAAAGGGGAATGAGAAACCGACCCCTCCCCAACAGC
AGTGCTGTGGACCTGGACTCCAGTGGGGAGTTTGCCAGCATCGAGAAGATGCTGGCCACCACAG
ACACCAACAAGTTCAGTCCGTTCCTGCAGACGGCAGAGGACACTCAGGAAGAGGTGGCTGGAAC
CCCTGCAGACCACCGCGGGCCCACTGAGGAGGAGCAAGGCAGCTCTGCGGAGGACAGGCTGCTG
AGAGCAAAGCGGAACTCCTATGCCAACTGCCTGCAGAAGATCAACTGTCCCCACTGTCCCCGGG
TCTTCCCTTGGGCCAGCTCCCTGCAGAGGCACATGCTTACACACACTGACAGCCAGTCAGACAC
AGACACACTGACCACCCCAGGTGAGGTGCTGGATCTCACAGCACGGGACAAAGAGCAGCCAACA
TCAGAGGGAGCCAGTGAGCTCAGCCCAGCTACGCAGGACCTTACAGAAACAGAGGCCAAGGCAG
AAGCAGCCCCACCTGAGGAGGAGGAGGAGGAAAAGGGGACGGAGGAGAACCCAGAACCAGAGTT
AGAGTGCCGCGTGGAAGAGAGCTCTGGGGATGCAGACGCCCCGGAGGAAGACACAGCCAGCAAC
CAGAGCCTGGATCTTGACTTCGCCACCAAGATGATGGACTTCAAGCTGGCCGAGAGTGAGGCAG
GTGCTGTGGACAGCCAAGGCCCGGCCCAGCAGGAGCCGAAGCATGCCTGCAATACCTGTGGGAA
GAACTTCAAGTTCCTGAGCACCCTAAGTCGCCACAGGAAGGCGCACGGCTGCCAGGAGCCCAAG
GAGGAGGAGGAGGCGCCTTCGCTGGAGAATGAGAGCCTTGGCAGAGCAGTTGAGGGGCCCTCAC
CTTCCCCTGAGCCTGAAGAGACACCTGCTGAGTCCTCAGCCACAGATCCAACGGCAGGAACCGG
GGAGGCCTCGGGGGAGAGACAGAATGAAGACACAGAGAGTCCCTCTGATGGGGAGGGCACGGCT
GAGAAGAGGGGTGACAGTGACAGAAGACCAAAGACAGACTCCCCCAAAAGCATGGCCAGTAAGG
CAGACAAGAGGAAGAAGGTTTGCAGTGTATGCAACAAGCGGTTCTGGTCCCTGCAGGACCTCAC
ACGGCACATGAGGTCACACACAGGAGAAAGGCCATACAAGTGTCAGACCTGCGAGCGAACCTTC
ACCTTAAAGCACAGCCTCGTTCGACACCAGAGGATCCACCAGAAAGCCAGGCACAGCAAGCACC
ACGGGAAAGACAGCGATAAAGATGAGCGGGCTGAGGAGGGCAGTGAGGATGAGTCCACCCACAG
TGCCAACAACCCTGCCTCGGAGAATGAGGCCGAGTCAGCTCCCAGCACCAGCAACCATGTGGCT
ATCACCAGGAGCCGGAAAGAGAGCTTGGCCAATTCTGGGAAGGAATGTGGCCGGGAGGAGAAGG
CTATAGCAGAGCAAGCCACCGAGCCCAGTGCCCCCAAAGAGCCGGGGTCTCCAGGTGAAACAGA
CCCCCAGAGCCCAGCAGCCATTGTGCAAGACTTGCTGGAGCTGTGCGGCACGAGGCCTGCCCCA
ATCCTGGCAGCCACCGACGGTGCCTCACAGCTCTTGGGCATGGAGTGATGGCCTGCCCTGTCTC
CAGCCTACAGTCAAAGCTAGCAGAGCATCCCGAATGTAGATTTCACAAGGTTTTCTCAGCATCC
TTCAGTTGTCTGGAGAGAGAGGAAAGAGAAGGCAAGAGAGAGACAAGCCTGCGGCCAACCAGCT
CGTGCCATAGCCTTACCCAGTACACATGCACCCGGCCCCAGTACAGCCGGCTTCAGTGCCTTAA
CTACTTATGGGTCCTCCCATGCTGTCGTGGGTGCCCTCCCCCCAAAAATATGACGTTTTAACAA
AACAAATATTTTAATGAATTTTTCGGAGGACCTTTTCATTTAAGCATTAACATTACCTTTTGTA
TTTGTGTGTTCGAGCTTGTTTTTGTGAATCTGTGACAGTACTGTTTGTTTTGTGAGCTGGAAAC
AGAAAACCTTCCCCTCGGATCCTGTAGCCAATAACTGGAAGAAAATGATGTGAATCTCTGTACA
TGACCAGAGGGAAGAGGGAGTGAGGCAGACTTCTAAGCTAGTCCTGTGTTCTCTGTTGCCCTGG
TACAGGAGCCTACGACCTGGCCTTTGTTGTTAGTGGGTGTGGTTGAGGCAGGGTTCCTGTGTGG
TGTGAACCAGAGCCAGGAAAGTCTAGCTTCAACCTCGCGCGTGTTTCACTCTCCATGTTAGAAA
TGGTTAGTGTTCAAATTCTTAATTTACAGAGAAAGGGACCTCCCCGGCACCATAGCCTATGGAG
GCCATGCCTGGAGGTCATATATCAACGCTCCCTTCTTCCCATTCGGTATATGTTATTAATATTA
ATATTATTTTTATTTTTACTTCATCAGTTTGCTGGGCTCTGCATTCAGCAGAGACAAATGGGCA
ATATTTGCCCTGGGTGACCTGTTCTGCTGCCTGGTCCCCGCTTACTGTGCCTGAAGCGTCTGGT
GGCACACCAGTGACGGCTCTTCTACTGTACTCAGACAAGCCTTCTTCCGTGACTGTAGAATCAA
TCCAGCAGGGGCCAGGGGTGGACCTCTAAGCGCGGCCAAGGAGTGGCTCAGAGAGGAGGGCAAG
GATGCACAAGTGGTGGGGAGCAGGCATCCGAGACACCAGCCATACCTGGGGCACCTCAGTCAGT
TTGCAAGGCACCCCAGTCTTCCCGCTAAGCTGGGTCAGTGCCTTCCCCGAGCTGTGCTACTACC
GTCATTTGAGAAGCCGGCCATGAGATACTACTGCAGGTGACGACCTGGAGCGCATGCGCAAGGT
TTAGACGGAAGGGTTCTCTTCAGCTTCCTGCAGTGTGGGGTTGTTCTTAAATCCCTAGCTGGCC
CAAGCCCCTGGTGCACAAAGACAGGGTTCCTTTAGTTCCCCAATATTCTGTACAAACAGTAGAC
CTCCCTCATCAGCTAAAAGAAACCGTTTTTCCTACTGTAGCTGAGCTCGGTTCAGCACCCTGTC
CTTTAGCAGAGACCCGAGGATGCCTGAGCCACACTGCTACTAGAGCCCTGTGTTTGTCCCTTGC
CCGCAGAGCCTCAAGACTTCCCTCGGAGAGGCCTTCCTCTGCTCTATTCCCTTCCCTTATCCTG
TGGCTCCTCCGCTAAGACGTGCGCCCCGGGGCACACGTACCCTTTTCTCCACCAGTTTCTAGTG
GCTAAAATCCAACCACCCTGACTTCAATGGAGGATAGGTATTCTAGAGATAATGAAAAGTGATA
TATGTATGAAAAAGAAAACATTGAGGTATATATGATTTTTAACTGTATTCGGGATGTATGGACC
AGTTTAAAATTGAGATTTTATTTACTGTAGAGAAAGAAATCAGAACCATTGATCCCATGGTCTT
TTAAGTTAAACCCAGCTACATCCCTTAGTTGTTTTTTTTTATTATTATTACAATTGTTATTGTT
ATTTTCATTGTTGTTATTTGGGGTTTCTTGTGTTTTGTTTTTCTTTGCAACTCTCCACACTAAA
CTCATGATATTGTGGGGAGAAGCCATGACTGAACTCTACGCTGTGGGAAGATGTAGCAGGGATT
GCTCCCAGCAGCGGCCGTCGCCAGGGCTGCCACTGGCAATAATCACTATTGATTTAAAGCTTTA
TTTAGTCTGATCTGTTTCCTTCATAGTTAATAAGGTCTTGCCACATTTTATTAGAGAGATTGAG
AGATGAATTATTTGTTGTCCTGCCCGCCTTCCTCCCCCAATATTAAACTGTGAAGTTTGTGATT
TGTTTAAACGCTGGGTGAATCTCTAGTGTTAGTTTGCATGTCCAGCTAATTTGTTTCTATACAT
TTTTGTTTGATTCTCTTTCTCCTCAGGGCTTTTACAAATATATATATATTATATGTGTGTATAT
ATATATATATATATGGATCTTCTGAAAAAAATTGAGGTGCAAATTTTCTCTTATTGTTTTGTTC
TGTTTTTGTTTTTGTTAATGGACACAATATTCAATCACTACATAAAGTACCCGGCTGTGAAACA
ATCCAGAAAGGCCCCACGGGGCAGTTACCCAAGCAGCTCTGCGGAAGGTCCGAGAGTCGGATGC
CGGTTCACACAGATCATCCTGCATTCGTCTCTTTCCTCTCCTCTCTTTCTTCAAGAAAAAAAAA
AAGTTGATCCTAATGATTTCAGCCCCTGCATCGAACAGGAAACAATGATAACTGTAGAATTCAT
ATTTTTCTAAAGGGAACTTAAAAACTGCTGCTACGTGTGTACAAAACTGGTTGACGCCACATGA
ACAGAATCACAAGTTTGGTTTTGGTACTTTCTTCTTTGAACTCAGTTGTATAGAACTTCCAAAT
CCAGAATGAAAAAAAGCTGTTCTGTATCAAACCATCTAAGCAATAAATGTTATATTTAAAAAAG
AAAG

hide sequence

RefSeq Acc Id:

XM_006253814 ⟹ XP_006253876

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	27,082,217 - 27,141,078 (-)	NCBI
mRatBN7.2	17	26,876,687 - 26,935,597 (-)	NCBI
Rnor_6.0	17	27,539,138 - 27,718,878 (-)	NCBI
Rnor_5.0	17	29,453,342 - 29,632,680 (-)	NCBI

Sequence:

show sequence

GCCTTCTTCGCCCTGGTCTGTCTCTAGAAGAGGTGGGCGTGGAGGACGGAGGAGTTGGGGTCCA
GTGGAGAGCAACTTGTGCGAGCTGGGCCGCGGTTACCCGAAGCATTGCAGCGGACTGCAAAGAT
GCTGGCTGCTGGGGACCGCCGCGCGCGGTCCTCTCTCTTGTTATTCACCCCGTACAGTTTCACA
GACTTTGCCGCCATCCTTTCCCTCTAGGAGCCCAGCAGCTGTCGCCAGGCGGGCGGATGAGAGG
AGAGTACCGCGCGGTCTCCTCAAGGCCTCGGTGAGCCTAGGTGCTCCCTGTAACGTTAACTAAG
AAGTTCTGTCATCTTCCTTGTCCCTTTCCCTAGTCGCCCGCACCCCTGGACCCTGGCAACGCGC
AACCTCCGCCAGGGCCTGGTGACGCGGGGGAGGGGCGCAGGGCGCAGGCAAAGTTGCTGAGTTG
CGGTGCAGGCTCAGAAGTTGCAGCTGCGAAGGCTGCTTCCCTCCCCCTTCCTGGACTCCGCGGC
TTGGATCGCACACCCAGTGGTCGTCACCCGCTACCTGCCCTCGCCGGCACCAGGCTGCATCCCC
TCCCCGCGCCCACGGGAAGCCCAGGTTGTTCCAACTCTGCTCCAGAAGTGGTGGCTTTGAAGTG
TGACCCTGCCCACATTTGGGCCCAGTCCTTGTCAGCTTCTCAGTAGAACGAAGAAAACAGTGTA
AAGGAGTGGTACCGAGGGAAGCACAGGGCTCAGTAGAGCCATTTCCTACCCCATGTGGATGACA
GCCGCAGCAAGGGACTATCACTTGGGGCAGAAAATGGAGTTCTATAGTGGAGACTTCTTAGAAG
CATAAAACCCCGTCCCGATGACGTCAAATCCGCCCACTGGTTTAGAAGGCTCAGACCTGTCTTC
CGTCAACACCATGATGTCAGCAGTAATGAGTATATCGAGTGTCACTGAGAATGGTGGGAGCCCC
CAGGGCATCAAGTCCCCCATGAAGCCTCCAGGACCAAATCGCATTGGCAGAAGGAACCAGGAAA
CGAAAGAGGAGAAGTCTTCCTACAACTGTCCCCTATGTGAAAAGGTCTGCACTACCCAGCACCA
GCTGACCATGCACATCCGTCAGCACAACACAGACACTGGAGGAGCTGACCACTCATGCAGCATC
TGTGGGAAGTCGCTGAGCTCTGCCAGCTCCCTGGATCGTCACATGCTGGTGCACTCTGGCGAGA
GGCCTTACAAGTGCACAGTGTGTGGCCAGTCGTTCACCACCAATGGCAACATGCACAGACATAT
GAAGATTCATGAGAAGGATACCAACAGTACTACAGCTGCAGCCCCTCCGTCCCCTCTGAAGCGT
AGGCGGTTGTCCTCCAAAAGGAAACTGAGTCACGATGCCGAGTCAGAAAGAGAAGACCCAGGAC
CAGCTAAAAAGACGGTTGAAGACGGGCAGTCCAGTGGCTTGGACAAGATGGCCGATGAAACCTT
TCACTGCCCGGTGTGTTTCAAGGAGTTTGTTTGCAAGTATGGACTGGAGACCCACATGGAGACT
CATTCAGATAACCCATTGAGATGTGACATTTGCTGTGTCACCTTCCGCACACATCGAGGACTAC
TGCGTCACAATGCGCTTGTCCACAAGCAGCTTCCCAGAGATGCCATGGGAAGGCCTTTTATCCA
GAACAATCCTTCCATTCCTGCTGGCTTCCATGACCTAGGGTTCACCGACTTCTCCTGTAGGAAG
TTCCCTCGGATCTCTCAGGCCTGGTGTGAAACAAACCTGCGTCGGTGCATCAGCGAGCAGCACC
GCTTTGTGTGTGACACCTGCGACAAGGCGTTCCCCATGCTGTCGTCACTCATCCTGCATAGGCA
GACCCACATCCCTGCCGATCAGGGACGGGAGAAGCTCCAGACTAAGACCCTGGCTGCTGATACC
TTGGACCAGAAGGTCTTCCTGGCCTTCCTAGGCCTGCAGCACACCAAAGACGTGAAGCCTGCAC
CTGCTGAGGAGCTCCTGCCAGACGACAGCCATACAATACAGCTCCAGACACTCAAGTGTCAGCT
ACCTCAGGACCCTGGCTGCACCAATGTGCTGAGTCTGTCTCCTTTTGAAGCGGCTTCTTTAGGT
GGTTCTCTAACAGTCCTCCCAGCCACAAAGGAGAATATGAAGCATCTGTCCCTGCAGCCCTTCC
AGAAGGGCTTCATCATCCAGCCAGACAGTAGTATTGTGGTTAAGCCTATTTCAGGAGAGTCGGC
CATTGAGCTGGCAGATATCCAGCAGATTCTAAAGATGGCAGCTTCTGCTCCTCCACAGATCAGT
CTTCCGCCACTTTCCAAGGCTCCTGCCACCCCTCTGCAGGCAATTTTCAAGCACATGCCTCCCT
TGAAGCCAAAGCCCTTGGTCGCACCCCGGACAGTGGTAGCTGCCTCCACACCCCCTCCTCTCAT
CAATGCACAGCAGGCATCCCCGGGTTGTATCAGCCCTAGCCTTCCGCCACAGTCCCTGAAGTTC
CTCAAGGGGTCTGTGGAGGCAGTCTCCAGTGCCCATCTGCTACAGTCCAAGTCCGGGATCCAGC
CAAACACCAGCACACAGCTCTTCCTGCAGCAGCCTGGGGTGGAGTTACCAGGCCAGGCCGAGAT
GAAAGCCCAGCTGGAGCAGGACAGCATCATTGAGGCCTTGCTGCCCCTAAACATGGAGGCGAAG
ATCAAGCAGGAGATAACAGAAGGTGACCTCAAGGCCATCATGACAGGCCCCAGTGGCAAGAAGA
CCCCCGCCATGCGCAAGGTGCTCTACCCCTGCCGCTTCTGTAACCAGGTGTTTGCCTTCTCTGG
AGTCCTGCGAGCCCACGTCCGCTCCCACCTGGGCATCTCGCCCTACCAGTGCAACATCTGTGAC
TACATCGCCGCAGACAAAGCTGCTCTCATCCGCCACCTCCGCACGCACAGCGGGGAGCGGCCGT
ACATCTGCAAGATCTGCCACTACCCGTTCACCGTCAAAGCCAACTGTGAGCGGCACCTGCGCAA
GAAGCACCTCAAGGCCACCAGGAAGGACATTGAGAAGAACATACAGTACGTGAGCAGCAGCACG
GCTGAGCTGGTGGATGCCCTCTGCTCCCCGGAGACCGTGTGCAGGCTGTGCGGTGAGGATCTGA
AGCACTACCGCGCCCTGCGCATTCACATGCGCACGCACTGCAGCCGTGGCCTGGGTGGCTGCCA
CAAAGGCCGGAAACCCTTCGAGTGCAAGGAATGCAACGCCGCCTTCGCGGCCAAGCGCAACTGC
ATCCACCACATCCTCAAGCAGCACCTGCACGTGCCCGAGAAAGACATTGAGAGCTACGTGCTGG
CCACCGACGCCGGCCTTGGCCCCGCAGACACGGCCGCAGAGGCCTCTTCCAGAGAAGAGAGCAG
CTGTGTCACTTTCGCCGAGTGCAAGCCCCTCACCACTTTCCTGGAGCCCCAAAATGGCTTTCTT
CACTCGAGCCCCACCCAGCCCCTGCCTTCCCACATCTCTGTCAAGTTGGAGCCGGCCAGCAGCT
TTGCAACAGACTTCAACGAACCCCTTGACTTTTCGCAGAAAGGCCTGGCACTGGTCCAAGTGAA
GCAGGAAAATATGTCCTCCTTGCTGAATTCTTCCTCCTCCTCTGCCCTCTATGACTGCTCCATG
GAGCCCATTGATCTGTCCATCCCCAAGAGCGGAAAGAGAGGAGACAAGGACACAGTTGTTTCCA
GCGACGCCAAGAAACCAGAACCAGAAGCTGGGAAAGCTGAGCAGCTCTCTCCCCATCCGCCACC
CTGCCCTACCTTGTCAGTGACTGTGGAGCCCAAAGGGAGCCTGGACAACCCAGCAGGCACTGTG
GTGGCCGTCACCACGGCTGCCAAGCTGGAGCCCCACACCCAGCCCCTCCAGGGCTCTGTGCAGC
TGGCTGTCCCCATCTACTCCTCAGCTCTCATCAGCAATGCTCCCCTCTTGGGCAGCTCCGCCCT
CCTGAACAGCGCGTCCTTGCTTCGGCCCTTACGGCCAAAGCCTCCCCTCCTCTTGCCAAAGCCC
GCGATGACAGAGGAGCTGCCGCCACTGGCCTCCATTGCGCAGATCATCTCCTCTGTGTCCTCGG
CTCCTACTCTGCTGAAAACGAAGGCAGCTGACCCCGGGCCGTCGAGCACCAGCAGTAACGCTGT
GGCCACAGACAGCCCAGGAGGCTCCATCCCCAAGGCCTCCCCTAGCCCCACAGACATCCCAAGC
TCGAGAGAACCCACTGACCCAGCCCCTACAGCCAGCAGCCCCGAGGAAGCCTCGCCTCCTGAAC
AAGGGCCGGCTGCCTCATCCAGGAAGAGGGGCAGGAAAAGGGGAATGAGAAACCGACCCCTCCC
CAACAGCAGTGCTGTGGACCTGGACTCCAGTGGGGAGTTTGCCAGCATCGAGAAGATGCTGGCC
ACCACAGACACCAACAAGTTCAGTCCGTTCCTGCAGACGGCAGAGGACACTCAGGAAGAGGTGG
CTGGAACCCCTGCAGACCACCGCGGGCCCACTGAGGAGGAGCAAGGCAGCTCTGCGGAGGACAG
GCTGCTGAGAGCAAAGCGGAACTCCTATGCCAACTGCCTGCAGAAGATCAACTGTCCCCACTGT
CCCCGGGTCTTCCCTTGGGCCAGCTCCCTGCAGAGGCACATGCTTACACACACTGGTCAGAAAC
CCTTCCCCTGTCAAAAATGCGATGCCTTCTTTTCTACCAAATCTAACTGTGAACGTCACCAGTT
GCGCAAACACGGAGTTACCACCTGCTCCCTGAGAAGAAACGGGCTTATTCCCCCAAAAGAGGGT
GATGTTGGATCCCATGATAGCACAGACAGCCAGTCAGACACAGACACACTGACCACCCCAGGTG
AGGTGCTGGATCTCACAGCACGGGACAAAGAGCAGCCAACATCAGAGGGAGCCAGTGAGCTCAG
CCCAGCTACGCAGGACCTTACAGAAACAGAGGCCAAGGCAGAAGCAGCCCCACCTGAGGAGGAG
GAGGAGGAAAAGGGGACGGAGGAGAACCCAGAACCAGAGTTAGAGTGCCGCGTGGAAGAGAGCT
CTGGGGATGCAGACGCCCCGGAGGAAGACACAGCCAGCAACCAGAGCCTGGATCTTGACTTCGC
CACCAAGATGATGGACTTCAAGCTGGCCGAGAGTGAGGCAGGTGCTGTGGACAGCCAAGGCCCG
GCCCAGCAGGAGCCGAAGCATGCCTGCAATACCTGTGGGAAGAACTTCAAGTTCCTGAGCACCC
TAAGTCGCCACAGGAAGGCGCACGGCTGCCAGGAGCCCAAGGAGGAGGAGGAGGCGCCTTCGCT
GGAGAATGAGAGCCTTGGCAGAGCAGTTGAGGGGCCCTCACCTTCCCCTGAGCCTGAAGAGACA
CCTGCTGAGTCCTCAGCCACAGATCCAACGGCAGGAACCGGGGAGGCCTCGGGGGAGAGACAGA
ATGAAGACACAGAGAGTCCCTCTGATGGGGAGGGCACGGCTGAGAAGAGGGGTGACAGTGACAG
AAGACCAAAGACAGACTCCCCCAAAAGCATGGCCAGTAAGGCAGACAAGAGGAAGAAGGTTTGC
AGTGTATGCAACAAGCGGTTCTGGTCCCTGCAGGACCTCACACGGCACATGAGGTCACACACAG
GAGAAAGGCCATACAAGTGTCAGACCTGCGAGCGAACCTTCACCTTAAAGCACAGCCTCGTTCG
ACACCAGAGGATCCACCAGAAAGCCAGGCACAGCAAGCACCACGGGAAAGACAGCGATAAAGAT
GAGCGGGCTGAGGAGGGCAGTGAGGATGAGTCCACCCACAGTGCCAACAACCCTGCCTCGGAGA
ATGAGGCCGAGTCAGCTCCCAGCACCAGCAACCATGTGGCTATCACCAGGAGCCGGAAAGAGAG
CTTGGCCAATTCTGGGAAGGAATGTGGCCGGGAGGAGAAGGCTATAGCAGAGCAAGCCACCGAG
CCCAGTGCCCCCAAAGAGCCGGGGTCTCCAGGTGAAACAGACCCCCAGAGCCCAGCAGCCATTG
TGCAAGACTTGCTGGAGCTGTGCGGCACGAGGCCTGCCCCAATCCTGGCAGCCACCGACGGTGC
CTCACAGCTCTTGGGCATGGAGTGATGGCCTGCCCTGTCTCCAGCCTACAGTCAAAGCTAGCAG
AGCATCCCGAATGTAGATTTCACAAGGTTTTCTCAGCATCCTTCAGTTGTCTGGAGAGAGAGGA
AAGAGAAGGCAAGAGAGAGACAAGCCTGCGGCCAACCAGCTCGTGCCATAGCCTTACCCAGTAC
ACATGCACCCGGCCCCAGTACAGCCGGCTTCAGTGCCTTAACTACTTATGGGTCCTCCCATGCT
GTCGTGGGTGCCCTCCCCCCAAAAATATGACGTTTTAACAAAACAAATATTTTAATGAATTTTT
CGGAGGACCTTTTCATTTAAGCATTAACATTACCTTTTGTATTTGTGTGTTCGAGCTTGTTTTT
GTGAATCTGTGACAGTACTGTTTGTTTTGTGAGCTGGAAACAGAAAACCTTCCCCTCGGATCCT
GTAGCCAATAACTGGAAGAAAATGATGTGAATCTCTGTACATGACCAGAGGGAAGAGGGAGTGA
GGCAGACTTCTAAGCTAGTCCTGTGTTCTCTGTTGCCCTGGTACAGGAGCCTACGACCTGGCCT
TTGTTGTTAGTGGGTGTGGTTGAGGCAGGGTTCCTGTGTGGTGTGAACCAGAGCCAGGAAAGTC
TAGCTTCAACCTCGCGCGTGTTTCACTCTCCATGTTAGAAATGGTTAGTGTTCAAATTCTTAAT
TTACAGAGAAAGGGACCTCCCCGGCACCATAGCCTATGGAGGCCATGCCTGGAGGTCATATATC
AACGCTCCCTTCTTCCCATTCGGTATATGTTATTAATATTAATATTATTTTTATTTTTACTTCA
TCAGTTTGCTGGGCTCTGCATTCAGCAGAGACAAATGGGCAATATTTGCCCTGGGTGACCTGTT
CTGCTGCCTGGTCCCCGCTTACTGTGCCTGAAGCGTCTGGTGGCACACCAGTGACGGCTCTTCT
ACTGTACTCAGACAAGCCTTCTTCCGTGACTGTAGAATCAATCCAGCAGGGGCCAGGGGTGGAC
CTCTAAGCGCGGCCAAGGAGTGGCTCAGAGAGGAGGGCAAGGATGCACAAGTGGTGGGGAGCAG
GCATCCGAGACACCAGCCATACCTGGGGCACCTCAGTCAGTTTGCAAGGCACCCCAGTCTTCCC
GCTAAGCTGGGTCAGTGCCTTCCCCGAGCTGTGCTACTACCGTCATTTGAGAAGCCGGCCATGA
GATACTACTGCAGGTGACGACCTGGAGCGCATGCGCAAGGTTTAGACGGAAGGGTTCTCTTCAG
CTTCCTGCAGTGTGGGGTTGTTCTTAAATCCCTAGCTGGCCCAAGCCCCTGGTGCACAAAGACA
GGGTTCCTTTAGTTCCCCAATATTCTGTACAAACAGTAGACCTCCCTCATCAGCTAAAAGAAAC
CGTTTTTCCTACTGTAGCTGAGCTCGGTTCAGCACCCTGTCCTTTAGCAGAGACCCGAGGATGC
CTGAGCCACACTGCTACTAGAGCCCTGTGTTTGTCCCTTGCCCGCAGAGCCTCAAGACTTCCCT
CGGAGAGGCCTTCCTCTGCTCTATTCCCTTCCCTTATCCTGTGGCTCCTCCGCTAAGACGTGCG
CCCCGGGGCACACGTACCCTTTTCTCCACCAGTTTCTAGTGGCTAAAATCCAACCACCCTGACT
TCAATGGAGGATAGGTATTCTAGAGATAATGAAAAGTGATATATGTATGAAAAAGAAAACATTG
AGGTATATATGATTTTTAACTGTATTCGGGATGTATGGACCAGTTTAAAATTGAGATTTTATTT
ACTGTAGAGAAAGAAATCAGAACCATTGATCCCATGGTCTTTTAAGTTAAACCCAGCTACATCC
CTTAGTTGTTTTTTTTTATTATTATTACAATTGTTATTGTTATTTTCATTGTTGTTATTTGGGG
TTTCTTGTGTTTTGTTTTTCTTTGCAACTCTCCACACTAAACTCATGATATTGTGGGGAGAAGC
CATGACTGAACTCTACGCTGTGGGAAGATGTAGCAGGGATTGCTCCCAGCAGCGGCCGTCGCCA
GGGCTGCCACTGGCAATAATCACTATTGATTTAAAGCTTTATTTAGTCTGATCTGTTTCCTTCA
TAGTTAATAAGGTCTTGCCACATTTTATTAGAGAGATTGAGAGATGAATTATTTGTTGTCCTGC
CCGCCTTCCTCCCCCAATATTAAACTGTGAAGTTTGTGATTTGTTTAAACGCTGGGTGAATCTC
TAGTGTTAGTTTGCATGTCCAGCTAATTTGTTTCTATACATTTTTGTTTGATTCTCTTTCTCCT
CAGGGCTTTTACAAATATATATATATTATATGTGTGTATATATATATATATATATGGATCTTCT
GAAAAAAATTGAGGTGCAAATTTTCTCTTATTGTTTTGTTCTGTTTTTGTTTTTGTTAATGGAC
ACAATATTCAATCACTACATAAAGTACCCGGCTGTGAAACAATCCAGAAAGGCCCCACGGGGCA
GTTACCCAAGCAGCTCTGCGGAAGGTCCGAGAGTCGGATGCCGGTTCACACAGATCATCCTGCA
TTCGTCTCTTTCCTCTCCTCTCTTTCTTCAAGAAAAAAAAAAAGTTGATCCTAATGATTTCAGC
CCCTGCATCGAACAGGAAACAATGATAACTGTAGAATTCATATTTTTCTAAAGGGAACTTAAAA
ACTGCTGCTACGTGTGTACAAAACTGGTTGACGCCACATGAACAGAATCACAAGTTTGGTTTTG
GTACTTTCTTCTTTGAACTCAGTTGTATAGAACTTCCAAATCCAGAATGAAAAAAAGCTGTTCT
GTATCAAACCATCTAAGCAATAAATGTTATATTTAAAAAAGAAA

hide sequence

RefSeq Acc Id:

XM_006253817 ⟹ XP_006253879

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	27,082,217 - 27,140,369 (-)	NCBI
mRatBN7.2	17	26,876,687 - 26,934,850 (-)	NCBI
Rnor_6.0	17	27,539,138 - 27,597,802 (-)	NCBI
Rnor_5.0	17	29,453,342 - 29,632,680 (-)	NCBI

Sequence:

show sequence

GTCTGTGGCTTGGGTGGTAGCAGCTAGTGGATTTTGTCTTGGAAGAATGTAGAGTAGACGTTCC
CATGCTGCCTAAGAAGAAACCCTGGACACATTCTGAATTAAAGATATACCCAAACCCTGTCATC
AACAGATATTTTCATGATTTATATCCGTGCATGGAGGAAATCTTTTAGGCCGTGGTATCTTTCA
GGGAATGCACCCTTATTCTTTGCCCTGTGATTTGACTTAAGCGGAAGCTTATCTATAACAGAAT
GAGCGTGGCTGCCTCTGCTATGATTTCCTCTTAACATAGCTGATTTGTTTGTTGTTTGTTTTCT
TTCTGAGCAAGCTCCTTGGGGGTGCGGGGGGATCTTCAAGTAAGTCCCGTCTGTTCAGGGTTCA
GCTTTCTCTTTTGGCTTCAGAGAATCCCCATTAAGATCTGTCAACTGGAAAAGGCTTGTGTTCA
GTTGGTTCACAGCGGTGCAAAGCCCCGAGTTCACGCCGTTTAATCCTCTTGAATTTCAATGGTC
ACAGGATCAGGACAGATTGGAGAGAGTAACTGCATCAACAGAAATTGGGAGGAATGAGTGTTGT
TAGAAATGCCCCTGCCTTCTCTACTGGGAACAAGGCATTGTCAGTTAATGAACAAATGAGGCAG
TTTTTAACAAGGTAGATAAGGGGACAAAGGGCAAATAATTCTCAGTTCCTCTCTGAAATCATAT
AGTGTAAAATGACTTCCCTGTTAGCTTCTTGTTAGTACAATGTAATCACACTGCCTTGCTTGGA
GACAAGGCATCCTCCTCAGAGTGTCATCATGGACATCAAGGAGCCATCATGGACAGGAGGACAA
ACCAGTGGGGCTTTTGTGAACTAATGATTGTTCTTATGCAGACTTCTCTCTGAGAACATCTATG
ATGGACTTTGACAGATGCTCAGGTTTTTTAGCTCAGTGTGCCCTCTAGGAGGGGACAGCTGCTC
CATGTTCCCCTCAGCGTGTAAGTGTGCATGTCTCTATTCTTCAACTGAAGCCTGAGGACTCAGC
AGAGCTCAGGAGGGTTTTATAGGCTTGGCTCATTGATAACTCTCTCTCTCTCTCTTTCCCCTGC
CTTCGTGTGCCTCTCTTCCTGTGGGTGCCTGAGAAAATACTCAGCCTGAGCACAGAAGGAACAC
TAGCCCTGGGAAGAAAAGGAAACGAAAGAGGAGAAGTCTTCCTACAACTGTCCCCTATGTGAAA
AGGTCTGCACTACCCAGCACCAGCTGACCATGCACATCCGTCAGCACAACACAGACACTGGAGG
AGCTGACCACTCATGCAGCATCTGTGGGAAGTCGCTGAGCTCTGCCAGCTCCCTGGATCGTCAC
ATGCTGGTGCACTCTGGCGAGAGGCCTTACAAGTGCACAGTGTGTGGCCAGTCGTTCACCACCA
ATGGCAACATGCACAGACATATGAAGATTCATGAGAAGGATACCAACAGTACTACAGCTGCAGC
CCCTCCGTCCCCTCTGAAGCGTAGGCGGTTGTCCTCCAAAAGGAAACTGAGTCACGATGCCGAG
TCAGAAAGAGAAGACCCAGGACCAGCTAAAAAGACGGTTGAAGACGGGCAGTCCAGTGGCTTGG
ACAAGATGGCCGATGAAACCTTTCACTGCCCGGTGTGTTTCAAGGAGTTTGTTTGCAAGTATGG
ACTGGAGACCCACATGGAGACTCATTCAGATAACCCATTGAGATGTGACATTTGCTGTGTCACC
TTCCGCACACATCGAGGACTACTGCGTCACAATGCGCTTGTCCACAAGCAGCTTCCCAGAGATG
CCATGGGAAGGCCTTTTATCCAGAACAATCCTTCCATTCCTGCTGGCTTCCATGACCTAGGGTT
CACCGACTTCTCCTGTAGGAAGTTCCCTCGGATCTCTCAGGCCTGGTGTGAAACAAACCTGCGT
CGGTGCATCAGCGAGCAGCACCGCTTTGTGTGTGACACCTGCGACAAGGCGTTCCCCATGCTGT
CGTCACTCATCCTGCATAGGCAGACCCACATCCCTGCCGATCAGGGACGGGAGAAGCTCCAGAC
TAAGACCCTGGCTGCTGATACCTTGGACCAGAAGGTCTTCCTGGCCTTCCTAGGCCTGCAGCAC
ACCAAAGACGTGAAGCCTGCACCTGCTGAGGAGCTCCTGCCAGACGACAGCCATACAATACAGC
TCCAGACACTCAAGTGTCAGCTACCTCAGGACCCTGGCTGCACCAATGTGCTGAGTCTGTCTCC
TTTTGAAGCGGCTTCTTTAGGTGGTTCTCTAACAGTCCTCCCAGCCACAAAGGAGAATATGAAG
CATCTGTCCCTGCAGCCCTTCCAGAAGGGCTTCATCATCCAGCCAGACAGTAGTATTGTGGTTA
AGCCTATTTCAGGAGAGTCGGCCATTGAGCTGGCAGATATCCAGCAGATTCTAAAGATGGCAGC
TTCTGCTCCTCCACAGATCAGTCTTCCGCCACTTTCCAAGGCTCCTGCCACCCCTCTGCAGGCA
ATTTTCAAGCACATGCCTCCCTTGAAGCCAAAGCCCTTGGTCGCACCCCGGACAGTGGTAGCTG
CCTCCACACCCCCTCCTCTCATCAATGCACAGCAGGCATCCCCGGGTTGTATCAGCCCTAGCCT
TCCGCCACAGTCCCTGAAGTTCCTCAAGGGGTCTGTGGAGGCAGTCTCCAGTGCCCATCTGCTA
CAGTCCAAGTCCGGGATCCAGCCAAACACCAGCACACAGCTCTTCCTGCAGCAGCCTGGGGTGG
AGTTACCAGGCCAGGCCGAGATGAAAGCCCAGCTGGAGCAGGACAGCATCATTGAGGCCTTGCT
GCCCCTAAACATGGAGGCGAAGATCAAGCAGGAGATAACAGAAGGTGACCTCAAGGCCATCATG
ACAGGCCCCAGTGGCAAGAAGACCCCCGCCATGCGCAAGGTGCTCTACCCCTGCCGCTTCTGTA
ACCAGGTGTTTGCCTTCTCTGGAGTCCTGCGAGCCCACGTCCGCTCCCACCTGGGCATCTCGCC
CTACCAGTGCAACATCTGTGACTACATCGCCGCAGACAAAGCTGCTCTCATCCGCCACCTCCGC
ACGCACAGCGGGGAGCGGCCGTACATCTGCAAGATCTGCCACTACCCGTTCACCGTCAAAGCCA
ACTGTGAGCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCAGGAAGGACATTGAGAAGAACAT
ACAGTACGTGAGCAGCAGCACGGCTGAGCTGGTGGATGCCCTCTGCTCCCCGGAGACCGTGTGC
AGGCTGTGCGGTGAGGATCTGAAGCACTACCGCGCCCTGCGCATTCACATGCGCACGCACTGCA
GCCGTGGCCTGGGTGGCTGCCACAAAGGCCGGAAACCCTTCGAGTGCAAGGAATGCAACGCCGC
CTTCGCGGCCAAGCGCAACTGCATCCACCACATCCTCAAGCAGCACCTGCACGTGCCCGAGAAA
GACATTGAGAGCTACGTGCTGGCCACCGACGCCGGCCTTGGCCCCGCAGACACGGCCGCAGAGG
CCTCTTCCAGAGAAGAGAGCAGCTGTGTCACTTTCGCCGAGTGCAAGCCCCTCACCACTTTCCT
GGAGCCCCAAAATGGCTTTCTTCACTCGAGCCCCACCCAGCCCCTGCCTTCCCACATCTCTGTC
AAGTTGGAGCCGGCCAGCAGCTTTGCAACAGACTTCAACGAACCCCTTGACTTTTCGCAGAAAG
GCCTGGCACTGGTCCAAGTGAAGCAGGAAAATATGTCCTCCTTGCTGAATTCTTCCTCCTCCTC
TGCCCTCTATGACTGCTCCATGGAGCCCATTGATCTGTCCATCCCCAAGAGCGGAAAGAGAGGA
GACAAGGACACAGTTGTTTCCAGCGACGCCAAGAAACCAGAACCAGAAGCTGGGAAAGCTGAGC
AGCTCTCTCCCCATCCGCCACCCTGCCCTACCTTGTCAGTGACTGTGGAGCCCAAAGGGAGCCT
GGACAACCCAGCAGGCACTGTGGTGGCCGTCACCACGGCTGCCAAGCTGGAGCCCCACACCCAG
CCCCTCCAGGGCTCTGTGCAGCTGGCTGTCCCCATCTACTCCTCAGCTCTCATCAGCAATGCTC
CCCTCTTGGGCAGCTCCGCCCTCCTGAACAGCGCGTCCTTGCTTCGGCCCTTACGGCCAAAGCC
TCCCCTCCTCTTGCCAAAGCCCGCGATGACAGAGGAGCTGCCGCCACTGGCCTCCATTGCGCAG
ATCATCTCCTCTGTGTCCTCGGCTCCTACTCTGCTGAAAACGAAGGCAGCTGACCCCGGGCCGT
CGAGCACCAGCAGTAACGCTGTGGCCACAGACAGCCCAGGAGGCTCCATCCCCAAGGCCTCCCC
TAGCCCCACAGACATCCCAAGCTCGAGAGAACCCACTGACCCAGCCCCTACAGCCAGCAGCCCC
GAGGAAGCCTCGCCTCCTGAACAAGGGCCGGCTGCCTCATCCAGGAAGAGGGGCAGGAAAAGGG
GAATGAGAAACCGACCCCTCCCCAACAGCAGTGCTGTGGACCTGGACTCCAGTGGGGAGTTTGC
CAGCATCGAGAAGATGCTGGCCACCACAGACACCAACAAGTTCAGTCCGTTCCTGCAGACGGCA
GAGGACACTCAGGAAGAGGTGGCTGGAACCCCTGCAGACCACCGCGGGCCCACTGAGGAGGAGC
AAGGCAGCTCTGCGGAGGACAGGCTGCTGAGAGCAAAGCGGAACTCCTATGCCAACTGCCTGCA
GAAGATCAACTGTCCCCACTGTCCCCGGGTCTTCCCTTGGGCCAGCTCCCTGCAGAGGCACATG
CTTACACACACTGGTCAGAAACCCTTCCCCTGTCAAAAATGCGATGCCTTCTTTTCTACCAAAT
CTAACTGTGAACGTCACCAGTTGCGCAAACACGGAGTTACCACCTGCTCCCTGAGAAGAAACGG
GCTTATTCCCCCAAAAGAGGGTGATGTTGGATCCCATGATAGCACAGACAGCCAGTCAGACACA
GACACACTGACCACCCCAGGTGAGGTGCTGGATCTCACAGCACGGGACAAAGAGCAGCCAACAT
CAGAGGGAGCCAGTGAGCTCAGCCCAGCTACGCAGGACCTTACAGAAACAGAGGCCAAGGCAGA
AGCAGCCCCACCTGAGGAGGAGGAGGAGGAAAAGGGGACGGAGGAGAACCCAGAACCAGAGTTA
GAGTGCCGCGTGGAAGAGAGCTCTGGGGATGCAGACGCCCCGGAGGAAGACACAGCCAGCAACC
AGAGCCTGGATCTTGACTTCGCCACCAAGATGATGGACTTCAAGCTGGCCGAGAGTGAGGCAGG
TGCTGTGGACAGCCAAGGCCCGGCCCAGCAGGAGCCGAAGCATGCCTGCAATACCTGTGGGAAG
AACTTCAAGTTCCTGAGCACCCTAAGTCGCCACAGGAAGGCGCACGGCTGCCAGGAGCCCAAGG
AGGAGGAGGAGGCGCCTTCGCTGGAGAATGAGAGCCTTGGCAGAGCAGTTGAGGGGCCCTCACC
TTCCCCTGAGCCTGAAGAGACACCTGCTGAGTCCTCAGCCACAGATCCAACGGCAGGAACCGGG
GAGGCCTCGGGGGAGAGACAGAATGAAGACACAGAGAGTCCCTCTGATGGGGAGGGCACGGCTG
AGAAGAGGGGTGACAGTGACAGAAGACCAAAGACAGACTCCCCCAAAAGCATGGCCAGTAAGGC
AGACAAGAGGAAGAAGGTTTGCAGTGTATGCAACAAGCGGTTCTGGTCCCTGCAGGACCTCACA
CGGCACATGAGGTCACACACAGGAGAAAGGCCATACAAGTGTCAGACCTGCGAGCGAACCTTCA
CCTTAAAGCACAGCCTCGTTCGACACCAGAGGATCCACCAGAAAGCCAGGCACAGCAAGCACCA
CGGGAAAGACAGCGATAAAGATGAGCGGGCTGAGGAGGGCAGTGAGGATGAGTCCACCCACAGT
GCCAACAACCCTGCCTCGGAGAATGAGGCCGAGTCAGCTCCCAGCACCAGCAACCATGTGGCTA
TCACCAGGAGCCGGAAAGAGAGCTTGGCCAATTCTGGGAAGGAATGTGGCCGGGAGGAGAAGGC
TATAGCAGAGCAAGCCACCGAGCCCAGTGCCCCCAAAGAGCCGGGGTCTCCAGGTGAAACAGAC
CCCCAGAGCCCAGCAGCCATTGTGCAAGACTTGCTGGAGCTGTGCGGCACGAGGCCTGCCCCAA
TCCTGGCAGCCACCGACGGTGCCTCACAGCTCTTGGGCATGGAGTGATGGCCTGCCCTGTCTCC
AGCCTACAGTCAAAGCTAGCAGAGCATCCCGAATGTAGATTTCACAAGGTTTTCTCAGCATCCT
TCAGTTGTCTGGAGAGAGAGGAAAGAGAAGGCAAGAGAGAGACAAGCCTGCGGCCAACCAGCTC
GTGCCATAGCCTTACCCAGTACACATGCACCCGGCCCCAGTACAGCCGGCTTCAGTGCCTTAAC
TACTTATGGGTCCTCCCATGCTGTCGTGGGTGCCCTCCCCCCAAAAATATGACGTTTTAACAAA
ACAAATATTTTAATGAATTTTTCGGAGGACCTTTTCATTTAAGCATTAACATTACCTTTTGTAT
TTGTGTGTTCGAGCTTGTTTTTGTGAATCTGTGACAGTACTGTTTGTTTTGTGAGCTGGAAACA
GAAAACCTTCCCCTCGGATCCTGTAGCCAATAACTGGAAGAAAATGATGTGAATCTCTGTACAT
GACCAGAGGGAAGAGGGAGTGAGGCAGACTTCTAAGCTAGTCCTGTGTTCTCTGTTGCCCTGGT
ACAGGAGCCTACGACCTGGCCTTTGTTGTTAGTGGGTGTGGTTGAGGCAGGGTTCCTGTGTGGT
GTGAACCAGAGCCAGGAAAGTCTAGCTTCAACCTCGCGCGTGTTTCACTCTCCATGTTAGAAAT
GGTTAGTGTTCAAATTCTTAATTTACAGAGAAAGGGACCTCCCCGGCACCATAGCCTATGGAGG
CCATGCCTGGAGGTCATATATCAACGCTCCCTTCTTCCCATTCGGTATATGTTATTAATATTAA
TATTATTTTTATTTTTACTTCATCAGTTTGCTGGGCTCTGCATTCAGCAGAGACAAATGGGCAA
TATTTGCCCTGGGTGACCTGTTCTGCTGCCTGGTCCCCGCTTACTGTGCCTGAAGCGTCTGGTG
GCACACCAGTGACGGCTCTTCTACTGTACTCAGACAAGCCTTCTTCCGTGACTGTAGAATCAAT
CCAGCAGGGGCCAGGGGTGGACCTCTAAGCGCGGCCAAGGAGTGGCTCAGAGAGGAGGGCAAGG
ATGCACAAGTGGTGGGGAGCAGGCATCCGAGACACCAGCCATACCTGGGGCACCTCAGTCAGTT
TGCAAGGCACCCCAGTCTTCCCGCTAAGCTGGGTCAGTGCCTTCCCCGAGCTGTGCTACTACCG
TCATTTGAGAAGCCGGCCATGAGATACTACTGCAGGTGACGACCTGGAGCGCATGCGCAAGGTT
TAGACGGAAGGGTTCTCTTCAGCTTCCTGCAGTGTGGGGTTGTTCTTAAATCCCTAGCTGGCCC
AAGCCCCTGGTGCACAAAGACAGGGTTCCTTTAGTTCCCCAATATTCTGTACAAACAGTAGACC
TCCCTCATCAGCTAAAAGAAACCGTTTTTCCTACTGTAGCTGAGCTCGGTTCAGCACCCTGTCC
TTTAGCAGAGACCCGAGGATGCCTGAGCCACACTGCTACTAGAGCCCTGTGTTTGTCCCTTGCC
CGCAGAGCCTCAAGACTTCCCTCGGAGAGGCCTTCCTCTGCTCTATTCCCTTCCCTTATCCTGT
GGCTCCTCCGCTAAGACGTGCGCCCCGGGGCACACGTACCCTTTTCTCCACCAGTTTCTAGTGG
CTAAAATCCAACCACCCTGACTTCAATGGAGGATAGGTATTCTAGAGATAATGAAAAGTGATAT
ATGTATGAAAAAGAAAACATTGAGGTATATATGATTTTTAACTGTATTCGGGATGTATGGACCA
GTTTAAAATTGAGATTTTATTTACTGTAGAGAAAGAAATCAGAACCATTGATCCCATGGTCTTT
TAAGTTAAACCCAGCTACATCCCTTAGTTGTTTTTTTTTATTATTATTACAATTGTTATTGTTA
TTTTCATTGTTGTTATTTGGGGTTTCTTGTGTTTTGTTTTTCTTTGCAACTCTCCACACTAAAC
TCATGATATTGTGGGGAGAAGCCATGACTGAACTCTACGCTGTGGGAAGATGTAGCAGGGATTG
CTCCCAGCAGCGGCCGTCGCCAGGGCTGCCACTGGCAATAATCACTATTGATTTAAAGCTTTAT
TTAGTCTGATCTGTTTCCTTCATAGTTAATAAGGTCTTGCCACATTTTATTAGAGAGATTGAGA
GATGAATTATTTGTTGTCCTGCCCGCCTTCCTCCCCCAATATTAAACTGTGAAGTTTGTGATTT
GTTTAAACGCTGGGTGAATCTCTAGTGTTAGTTTGCATGTCCAGCTAATTTGTTTCTATACATT
TTTGTTTGATTCTCTTTCTCCTCAGGGCTTTTACAAATATATATATATTATATGTGTGTATATA
TATATATATATATGGATCTTCTGAAAAAAATTGAGGTGCAAATTTTCTCTTATTGTTTTGTTCT
GTTTTTGTTTTTGTTAATGGACACAATATTCAATCACTACATAAAGTACCCGGCTGTGAAACAA
TCCAGAAAGGCCCCACGGGGCAGTTACCCAAGCAGCTCTGCGGAAGGTCCGAGAGTCGGATGCC
GGTTCACACAGATCATCCTGCATTCGTCTCTTTCCTCTCCTCTCTTTCTTCAAGAAAAAAAAAA
AGTTGATCCTAATGATTTCAGCCCCTGCATCGAACAGGAAACAATGATAACTGTAGAATTCATA
TTTTTCTAAAGGGAACTTAAAAACTGCTGCTACGTGTGTACAAAACTGGTTGACGCCACATGAA
CAGAATCACAAGTTTGGTTTTGGTACTTTCTTCTTTGAACTCAGTTGTATAGAACTTCCAAATC
CAGAATGAAAAAAAGCTGTTCTGTATCAAACCATCTAAGCAATAAATGTTATATTTAAAAAAGA
AA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001100818	(Get FASTA)	NCBI Sequence Viewer
	XP_006253876	(Get FASTA)	NCBI Sequence Viewer
	XP_006253879	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL98267	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000056967
	ENSRNOP00000056967.2
	ENSRNOP00000073072
	ENSRNOP00000073072.1

RefSeq Acc Id:

NP_001100818 ⟸ NM_001107348

- UniProtKB:

D3ZI11 (UniProtKB/TrEMBL), A6J7B7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTSNPPTGLEGSDLSSVNTMMSAVMSISSVTENGGSPQGIKSPMKPPGPNRIGRRNQETKEEKS
SYNCPLCEKVCTTQHQLTMHIRQHNTDTGGADHSCSICGKSLSSASSLDRHMLVHSGERPYKCT
VCGQSFTTNGNMHRHMKIHEKDTNSTTAAAPPSPLKRRRLSSKRKLSHDAESEREDPGPAKKTV
EDGQSSGLDKMADETFHCPVCFKEFVCKYGLETHMETHSDNPLRCDICCVTFRTHRGLLRHNAL
VHKQLPRDAMGRPFIQNNPSIPAGFHDLGFTDFSCRKFPRISQAWCETNLRRCISEQHRFVCDT
CDKAFPMLSSLILHRQTHIPADQGREKLQTKTLAADTLDQKVFLAFLGLQHTKDVKPAPAEELL
PDDSHTIQLQTLKCQLPQDPGCTNVLSLSPFEAASLGGSLTVLPATKENMKHLSLQPFQKGFII
QPDSSIVVKPISGESAIELADIQQILKMAASAPPQISLPPLSKAPATPLQAIFKHMPPLKPKPL
VAPRTVVAASTPPPLINAQQASPGCISPSLPPQSLKFLKGSVEAVSSAHLLQSKSGIQPNTSTQ
LFLQQPGVELPGQAEMKAQLEQDSIIEALLPLNMEAKIKQEITEGDLKAIMTGPSGKKTPAMRK
VLYPCRFCNQVFAFSGVLRAHVRSHLGISPYQCNICDYIAADKAALIRHLRTHSGERPYICKIC
HYPFTVKANCERHLRKKHLKATRKDIEKNIQYVSSSTAELVDALCSPETVCRLCGEDLKHYRAL
RIHMRTHCSRGLGGCHKGRKPFECKECNAAFAAKRNCIHHILKQHLHVPEKDIESYVLATDAGL
GPADTAAEASSREESSCVTFAECKPLTTFLEPQNGFLHSSPTQPLPSHISVKLEPASSFATDFN
EPLDFSQKGLALVQVKQENMSSLLNSSSSSALYDCSMEPIDLSIPKSGKRGDKDTVVSSDAKKP
EPEAGKAEQLSPHPPPCPTLSVTVEPKGSLDNPAGTVVAVTTAAKLEPHTQPLQGSVQLAVPIY
SSALISNAPLLGSSALLNSASLLRPLRPKPPLLLPKPAMTEELPPLASIAQIISSVSSAPTLLK
TKAADPGPSSTSSNAVATDSPGGSIPKASPSPTDIPSSREPTDPAPTASSPEEASPPEQGPAAS
SRKRGRKRGMRNRPLPNSSAVDLDSSGEFASIEKMLATTDTNKFSPFLQTAEDTQEEVAGTPAD
HRGPTEEEQGSSAEDRLLRAKRNSYANCLQKINCPHCPRVFPWASSLQRHMLTHTDSQSDTDTL
TTPGEVLDLTARDKEQPTSEGASELSPATQDLTETEAKAEAAPPEEEEEEKGTEENPEPELECR
VEESSGDADAPEEDTASNQSLDLDFATKMMDFKLAESEAGAVDSQGPAQQEPKHACNTCGKNFK
FLSTLSRHRKAHGCQEPKEEEEAPSLENESLGRAVEGPSPSPEPEETPAESSATDPTAGTGEAS
GERQNEDTESPSDGEGTAEKRGDSDRRPKTDSPKSMASKADKRKKVCSVCNKRFWSLQDLTRHM
RSHTGERPYKCQTCERTFTLKHSLVRHQRIHQKARHSKHHGKDSDKDERAEEGSEDESTHSANN
PASENEAESAPSTSNHVAITRSRKESLANSGKECGREEKAIAEQATEPSAPKEPGSPGETDPQS
PAAIVQDLLELCGTRPAPILAATDGASQLLGME

hide sequence

RefSeq Acc Id:	XP_006253876 ⟸ XM_006253814
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K4K0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSNPPTGLEGSDLSSVNTMMSAVMSISSVTENGGSPQGIKSPMKPPGPNRIGRRNQETKEEKS SYNCPLCEKVCTTQHQLTMHIRQHNTDTGGADHSCSICGKSLSSASSLDRHMLVHSGERPYKCT VCGQSFTTNGNMHRHMKIHEKDTNSTTAAAPPSPLKRRRLSSKRKLSHDAESEREDPGPAKKTV EDGQSSGLDKMADETFHCPVCFKEFVCKYGLETHMETHSDNPLRCDICCVTFRTHRGLLRHNAL VHKQLPRDAMGRPFIQNNPSIPAGFHDLGFTDFSCRKFPRISQAWCETNLRRCISEQHRFVCDT CDKAFPMLSSLILHRQTHIPADQGREKLQTKTLAADTLDQKVFLAFLGLQHTKDVKPAPAEELL PDDSHTIQLQTLKCQLPQDPGCTNVLSLSPFEAASLGGSLTVLPATKENMKHLSLQPFQKGFII QPDSSIVVKPISGESAIELADIQQILKMAASAPPQISLPPLSKAPATPLQAIFKHMPPLKPKPL VAPRTVVAASTPPPLINAQQASPGCISPSLPPQSLKFLKGSVEAVSSAHLLQSKSGIQPNTSTQ LFLQQPGVELPGQAEMKAQLEQDSIIEALLPLNMEAKIKQEITEGDLKAIMTGPSGKKTPAMRK VLYPCRFCNQVFAFSGVLRAHVRSHLGISPYQCNICDYIAADKAALIRHLRTHSGERPYICKIC HYPFTVKANCERHLRKKHLKATRKDIEKNIQYVSSSTAELVDALCSPETVCRLCGEDLKHYRAL RIHMRTHCSRGLGGCHKGRKPFECKECNAAFAAKRNCIHHILKQHLHVPEKDIESYVLATDAGL GPADTAAEASSREESSCVTFAECKPLTTFLEPQNGFLHSSPTQPLPSHISVKLEPASSFATDFN EPLDFSQKGLALVQVKQENMSSLLNSSSSSALYDCSMEPIDLSIPKSGKRGDKDTVVSSDAKKP EPEAGKAEQLSPHPPPCPTLSVTVEPKGSLDNPAGTVVAVTTAAKLEPHTQPLQGSVQLAVPIY SSALISNAPLLGSSALLNSASLLRPLRPKPPLLLPKPAMTEELPPLASIAQIISSVSSAPTLLK TKAADPGPSSTSSNAVATDSPGGSIPKASPSPTDIPSSREPTDPAPTASSPEEASPPEQGPAAS SRKRGRKRGMRNRPLPNSSAVDLDSSGEFASIEKMLATTDTNKFSPFLQTAEDTQEEVAGTPAD HRGPTEEEQGSSAEDRLLRAKRNSYANCLQKINCPHCPRVFPWASSLQRHMLTHTGQKPFPCQK CDAFFSTKSNCERHQLRKHGVTTCSLRRNGLIPPKEGDVGSHDSTDSQSDTDTLTTPGEVLDLT ARDKEQPTSEGASELSPATQDLTETEAKAEAAPPEEEEEEKGTEENPEPELECRVEESSGDADA PEEDTASNQSLDLDFATKMMDFKLAESEAGAVDSQGPAQQEPKHACNTCGKNFKFLSTLSRHRK AHGCQEPKEEEEAPSLENESLGRAVEGPSPSPEPEETPAESSATDPTAGTGEASGERQNEDTES PSDGEGTAEKRGDSDRRPKTDSPKSMASKADKRKKVCSVCNKRFWSLQDLTRHMRSHTGERPYK CQTCERTFTLKHSLVRHQRIHQKARHSKHHGKDSDKDERAEEGSEDESTHSANNPASENEAESA PSTSNHVAITRSRKESLANSGKECGREEKAIAEQATEPSAPKEPGSPGETDPQSPAAIVQDLLE LCGTRPAPILAATDGASQLLGME hide sequence

RefSeq Acc Id:

XP_006253879 ⟸ XM_006253817

- Peptide Label:

isoform X2

- Sequence:

show sequence

MHIRQHNTDTGGADHSCSICGKSLSSASSLDRHMLVHSGERPYKCTVCGQSFTTNGNMHRHMKI
HEKDTNSTTAAAPPSPLKRRRLSSKRKLSHDAESEREDPGPAKKTVEDGQSSGLDKMADETFHC
PVCFKEFVCKYGLETHMETHSDNPLRCDICCVTFRTHRGLLRHNALVHKQLPRDAMGRPFIQNN
PSIPAGFHDLGFTDFSCRKFPRISQAWCETNLRRCISEQHRFVCDTCDKAFPMLSSLILHRQTH
IPADQGREKLQTKTLAADTLDQKVFLAFLGLQHTKDVKPAPAEELLPDDSHTIQLQTLKCQLPQ
DPGCTNVLSLSPFEAASLGGSLTVLPATKENMKHLSLQPFQKGFIIQPDSSIVVKPISGESAIE
LADIQQILKMAASAPPQISLPPLSKAPATPLQAIFKHMPPLKPKPLVAPRTVVAASTPPPLINA
QQASPGCISPSLPPQSLKFLKGSVEAVSSAHLLQSKSGIQPNTSTQLFLQQPGVELPGQAEMKA
QLEQDSIIEALLPLNMEAKIKQEITEGDLKAIMTGPSGKKTPAMRKVLYPCRFCNQVFAFSGVL
RAHVRSHLGISPYQCNICDYIAADKAALIRHLRTHSGERPYICKICHYPFTVKANCERHLRKKH
LKATRKDIEKNIQYVSSSTAELVDALCSPETVCRLCGEDLKHYRALRIHMRTHCSRGLGGCHKG
RKPFECKECNAAFAAKRNCIHHILKQHLHVPEKDIESYVLATDAGLGPADTAAEASSREESSCV
TFAECKPLTTFLEPQNGFLHSSPTQPLPSHISVKLEPASSFATDFNEPLDFSQKGLALVQVKQE
NMSSLLNSSSSSALYDCSMEPIDLSIPKSGKRGDKDTVVSSDAKKPEPEAGKAEQLSPHPPPCP
TLSVTVEPKGSLDNPAGTVVAVTTAAKLEPHTQPLQGSVQLAVPIYSSALISNAPLLGSSALLN
SASLLRPLRPKPPLLLPKPAMTEELPPLASIAQIISSVSSAPTLLKTKAADPGPSSTSSNAVAT
DSPGGSIPKASPSPTDIPSSREPTDPAPTASSPEEASPPEQGPAASSRKRGRKRGMRNRPLPNS
SAVDLDSSGEFASIEKMLATTDTNKFSPFLQTAEDTQEEVAGTPADHRGPTEEEQGSSAEDRLL
RAKRNSYANCLQKINCPHCPRVFPWASSLQRHMLTHTGQKPFPCQKCDAFFSTKSNCERHQLRK
HGVTTCSLRRNGLIPPKEGDVGSHDSTDSQSDTDTLTTPGEVLDLTARDKEQPTSEGASELSPA
TQDLTETEAKAEAAPPEEEEEEKGTEENPEPELECRVEESSGDADAPEEDTASNQSLDLDFATK
MMDFKLAESEAGAVDSQGPAQQEPKHACNTCGKNFKFLSTLSRHRKAHGCQEPKEEEEAPSLEN
ESLGRAVEGPSPSPEPEETPAESSATDPTAGTGEASGERQNEDTESPSDGEGTAEKRGDSDRRP
KTDSPKSMASKADKRKKVCSVCNKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKHSLVRHQ
RIHQKARHSKHHGKDSDKDERAEEGSEDESTHSANNPASENEAESAPSTSNHVAITRSRKESLA
NSGKECGREEKAIAEQATEPSAPKEPGSPGETDPQSPAAIVQDLLELCGTRPAPILAATDGASQ
LLGME

hide sequence

Ensembl Acc Id:

ENSRNOP00000073072 ⟸ ENSRNOT00000079298

Ensembl Acc Id:

ENSRNOP00000056967 ⟸ ENSRNOT00000060218

Protein Domains

C2H2-type

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700398

Promoter ID:

EPDNEW_R10921

Type:

initiation region

Name:

Rreb1_1

Description:

ras responsive element binding protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	17	27,665,205 - 27,665,265	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310904	AgrOrtholog
BioCyc Gene	G2FUF-9670	BioCyc
Ensembl Genes	ENSRNOG00000015701	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000060218	ENTREZGENE
	ENSRNOT00000060218.6	UniProtKB/TrEMBL
	ENSRNOT00000079298	ENTREZGENE
	ENSRNOT00000079298.3	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	RREB1	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:306873	UniProtKB/TrEMBL
NCBI Gene	306873	ENTREZGENE
PANTHER	RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1	UniProtKB/TrEMBL
	RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
	zf-C2H2_6	UniProtKB/TrEMBL
PhenoGen	Rreb1	PhenoGen
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000015701	RatGTEx
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0G2K4K0	ENTREZGENE, UniProtKB/TrEMBL
	A6J7B7	ENTREZGENE, UniProtKB/TrEMBL
	D3ZI11	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Rreb1	ras responsive element binding protein 1	Rreb1_predicted	ras responsive element binding protein 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Rreb1_predicted	ras responsive element binding protein 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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