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Gene: Mrap2 (melanocortin 2 receptor accessory protein 2) Rattus norvegicus

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Symbol:

Mrap2

Name:

melanocortin 2 receptor accessory protein 2

RGD ID:

1309873

Description:

Predicted to enable identical protein binding activity; melanocortin receptor binding activity; and signaling receptor regulator activity. Predicted to be involved in several processes, including negative regulation of protein localization to plasma membrane; protein localization to plasma membrane; and regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in endoplasmic reticulum and plasma membrane. Orthologous to human MRAP2 (melanocortin 2 receptor accessory protein 2); PARTICIPATES IN melanocortin system pathway; INTERACTS WITH 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC363112; LOC363112; melanocortin-2 receptor accessory protein 2; RGD1309873; similar to hypothetical protein BC010003; uncharacterized protein LOC363112

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	96,968,239 - 97,024,581 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	96,988,079 - 97,024,579 (+)	Ensembl				GRCr8
mRatBN7.2	8	88,088,293 - 88,144,636 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	88,088,272 - 88,143,886 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	93,759,921 - 93,815,629 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	91,959,128 - 92,014,842 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	89,792,874 - 89,848,464 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	8	97,882,191 - 97,937,776 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	8	99,978,244 - 100,033,823 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	8	98,467,514 - 98,523,097 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	8	89,923,827 - 89,979,854 (+)	NCBI		F344_StmMcwi
Rnor_6.0	8	94,801,336 - 94,858,192 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	94,801,336 - 94,857,443 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	94,308,773 - 94,370,052 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	92,385,844 - 92,442,482 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	87,674,071 - 87,729,420 (+)	NCBI		Celera
RGSC_v3.1	8	92,405,298 - 92,462,270 (+)	NCBI
Cytogenetic Map	8	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

obesity (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,4,4'-trichlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (EXP)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

copper(II) sulfate (ISO)

deoxynivalenol (ISO)

diarsenic trioxide (ISO)

diazinon (ISO)

ethanol (ISO)

fenvalerate (EXP)

fulvestrant (ISO)

ketoconazole (EXP)

methapyrilene (ISO)

methylmercury chloride (ISO)

mono(2-ethylhexyl) phthalate (ISO)

nickel atom (ISO)

okadaic acid (ISO)

PCB138 (ISO)

resveratrol (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sotorasib (ISO)

T-2 toxin (ISO)

Theaflavin 3,3'-digallate (ISO)

thimerosal (ISO)

titanium dioxide (ISO)

trametinib (ISO)

trichloroethene (EXP)

triclosan (ISO)

tunicamycin (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

energy homeostasis (IEA,ISO)

energy reserve metabolic process (IEA,ISO)

feeding behavior (IEA,ISO)

negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (IEA,ISO)

negative regulation of protein localization to plasma membrane (IEA,ISO)

positive regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (IEA,ISO)

protein localization to plasma membrane (IBA,IEA,ISO)

regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (IBA)

Cellular Component

endoplasmic reticulum (IBA,IEA,ISO)

endoplasmic reticulum membrane (IEA)

plasma membrane (IBA,IEA,ISO)

Molecular Function

corticotropin hormone receptor binding (IBA,IEA,ISO)

identical protein binding (IEA,ISO)

protein binding (ISO)

signaling receptor regulator activity (IBA,IEA,ISO)

type 1 melanocortin receptor binding (IBA,IEA,ISO)

type 3 melanocortin receptor binding (IBA,IEA,ISO)

type 4 melanocortin receptor binding (IBA,IEA,ISO)

type 5 melanocortin receptor binding (IBA,IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

melanocortin system pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19329486	PMID:20371771	PMID:23869016

Genomics

Comparative Map Data

Mrap2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	96,968,239 - 97,024,581 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	96,988,079 - 97,024,579 (+)	Ensembl				GRCr8
mRatBN7.2	8	88,088,293 - 88,144,636 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	88,088,272 - 88,143,886 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	93,759,921 - 93,815,629 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	91,959,128 - 92,014,842 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	89,792,874 - 89,848,464 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	8	97,882,191 - 97,937,776 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	8	99,978,244 - 100,033,823 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	8	98,467,514 - 98,523,097 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	8	89,923,827 - 89,979,854 (+)	NCBI		F344_StmMcwi
Rnor_6.0	8	94,801,336 - 94,858,192 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	94,801,336 - 94,857,443 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	94,308,773 - 94,370,052 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	92,385,844 - 92,442,482 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	87,674,071 - 87,729,420 (+)	NCBI		Celera
RGSC_v3.1	8	92,405,298 - 92,462,270 (+)	NCBI
Cytogenetic Map	8	q31	NCBI

MRAP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	84,033,178 - 84,146,282 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	84,033,203 - 84,090,887 (+)	Ensembl			hg38	GRCh38
GRCh37	6	84,743,491 - 84,800,600 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	84,800,139 - 84,857,325 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	84,800,138 - 84,857,318	NCBI
Celera	6	85,176,774 - 85,233,960 (+)	NCBI		Celera
Cytogenetic Map	6	q14.2	NCBI
HuRef	6	81,973,084 - 82,030,271 (+)	NCBI		HuRef
CHM1_1	6	84,840,948 - 84,898,141 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	85,256,469 - 85,369,574 (+)	NCBI		T2T-CHM13v2.0

Mrap2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	87,026,293 - 87,066,104 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	87,026,359 - 87,066,098 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	87,144,236 - 87,184,051 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	87,144,306 - 87,184,045 (+)	Ensembl			mm10	GRCm38
MGSCv37	9	87,039,141 - 87,078,880 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	86,931,933 - 86,980,777 (+)	NCBI		MGSCv36	mm8
Celera	9	84,228,531 - 84,261,719 (+)	NCBI		Celera
Cytogenetic Map	9	E3.1	NCBI
cM Map	9	46.76	NCBI

Mrap2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955411	11,582,234 - 11,628,892 (+)	Ensembl
ChiLan1.0	NW_004955411	11,582,317 - 11,628,874 (+)	NCBI	ChiLan1.0	ChiLan1.0

MRAP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	104,112,645 - 104,246,123 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	102,009,435 - 102,140,688 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	81,914,767 - 82,041,579 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	85,199,558 - 85,315,560 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	85,199,558 - 85,257,251 (+)	Ensembl			panPan2	panpan1.1

MRAP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	44,323,932 - 44,373,170 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	44,324,197 - 44,373,138 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	44,138,212 - 44,187,451 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	45,093,144 - 45,142,386 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	45,093,414 - 45,142,354 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	44,431,749 - 44,481,124 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	44,366,770 - 44,416,186 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	44,542,252 - 44,591,501 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mrap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	79,525,400 - 79,566,100 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936510	6,904,795 - 6,945,626 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936510	6,905,870 - 6,945,583 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MRAP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	53,256,006 - 53,318,107 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	53,248,311 - 53,318,111 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	59,578,666 - 59,648,531 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MRAP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	8,709,501 - 8,764,142 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666040	184,913,522 - 184,966,662 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mrap2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624799	10,461,988 - 10,545,821 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624799	10,462,344 - 10,545,840 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mrap2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	81,145,958 - 81,202,787 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mrap2
354 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	128
Count of miRNA genes:	104
Interacting mature miRNAs:	117
Transcripts:	ENSRNOT00000014007
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12879878	Bw183	Body weight QTL 183		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	62848139	107848139	Rat
1300177	Cm2	Cardiac mass QTL 2	3.65		heart mass (VT:0007028)	heart weight (CMO:0000017)	8	63141536	109261840	Rat
1549909	Stresp11	Stress response QTL 11	6.83	0.0019	stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	8	82352698	127352698	Rat
1549908	Neudeg1	Neurodegradation QTL 1	5.5	0	nervous system integrity trait (VT:0010566)	logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)	8	58337123	103337123	Rat
12879879	Cm99	Cardiac mass QTL 99		0.001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	62848139	107848139	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	49849908	118871671	Rat
9590292	Uminl3	Urine mineral level QTL 3	3.62	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	8	80768445	125768445	Rat
1331804	Cm30	Cardiac mass QTL 30	3.77443		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	8	62970527	107970527	Rat
1578769	Uae31	Urinary albumin excretion QTL 31	3.3	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	39106363	103375781	Rat
12879880	Cm100	Cardiac mass QTL 100		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	62848139	107848139	Rat
12879881	Cm101	Cardiac mass QTL 101		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	8	62848139	107848139	Rat
12879882	Am8	Aortic mass QTL 8		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	62848139	107848139	Rat
12879883	Kidm65	Kidney mass QTL 65		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	62848139	107848139	Rat
70161	Bp62	Blood pressure QTL 62	2.9	0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	51589699	99045312	Rat
71120	Niddm21	Non-insulin dependent diabetes mellitus QTL 21	3.73		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	8	66992095	111992095	Rat
1358912	Bw51	Body weight QTL 51	2.95		body mass (VT:0001259)	body weight (CMO:0000012)	8	60248093	105248093	Rat
1578765	Klgr1	Kidney lesion grade QTL 1	3.3	0.0001	kidney morphology trait (VT:0002135)	organ lesion measurement (CMO:0000677)	8	39106363	103375781	Rat
634332	Pia18	Pristane induced arthritis QTL 18	4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	84192326	132782436	Rat
1300171	Bp184	Blood pressure QTL 184	3.66		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	8	79394435	132782436	Rat
1578755	Pur5	Proteinuria QTL 5	3.3	0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	8	39106258	103375958	Rat
631210	Bw3	Body weight QTL3	5.9		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	8	61019838	121662124	Rat
2293697	Bmd39	Bone mineral density QTL 39			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	8	62848139	107848139	Rat
8662823	Vetf5	Vascular elastic tissue fragility QTL 5	1.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	8	63404444	108404444	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
1331837	Bw23	Body weight QTL 23	4.19	0.00007	body mass (VT:0001259)	body weight (CMO:0000012)	8	55428416	107963099	Rat
1331838	Niddm61	Non-insulin dependent diabetes mellitus QTL 61	3.53	0.0004	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	62963099	107963099	Rat
8694446	Bw170	Body weight QTL 170	12.07	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	8	80768445	125768445	Rat
631650	Stl6	Serum triglyceride level QTL 6	4	0.0019	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	70041301	121080908	Rat
1331769	Rf39	Renal function QTL 39	3.871		urine output (VT:0003620)	timed urine volume (CMO:0000260)	8	50763951	107970527	Rat
1581557	Eae16	Experimental allergic encephalomyelitis QTL 16	3.8		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	8	68690349	119799881	Rat
10450865	Bw175	Body weight QTL 175	4.1		total fat pad mass (VT:0015008)	adipose tissue molecular composition measurement (CMO:0000484)	8	84192326	129192326	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	55428333	127966348	Rat
2316950	Scl66	Serum cholesterol level QTL 66	4.1		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39106363	114525825	Rat
2300181	Bmd55	Bone mineral density QTL 55	5.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	85348065	130348065	Rat
724540	Uae8	Urinary albumin excretion QTL 8	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	8	39106258	103375958	Rat
10402857	Bp380	Blood pressure QTL 380		0.95	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	62848139	107848139	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
2301402	Bp316	Blood pressure QTL 316		0.005	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	62848139	107848139	Rat
631664	Hcar3	Hepatocarcinoma resistance QTL 3	2.9	0.0005	liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	8	62982864	107982864	Rat
8694200	Abfw4	Abdominal fat weight QTL 4	9.07	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	8	80768445	125768445	Rat
8694392	Bw161	Body weight QTL 161	8.06	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	8	80768445	125768445	Rat
61437	Cia6	Collagen induced arthritis QTL 6			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	91340911	131690273	Rat

Markers in Region

RH129290

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	88,087,893 - 88,088,085 (+)	MAPPER	mRatBN7.2
mRatBN7.2	3	69,751,975 - 69,752,831 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	72,070,468 - 72,071,323	NCBI	Rnor6.0
Rnor_6.0	8	94,800,937 - 94,801,128	NCBI	Rnor6.0
Rnor_5.0	8	94,308,374 - 94,308,565	UniSTS	Rnor5.0
Rnor_5.0	3	78,591,114 - 78,591,969	UniSTS	Rnor5.0
RGSC_v3.4	8	92,385,445 - 92,385,636	UniSTS	RGSC3.4
RGSC_v3.4	3	67,877,765 - 67,878,620	UniSTS	RGSC3.4
Celera	3	69,107,659 - 69,108,514	UniSTS
Celera	8	87,673,672 - 87,673,863	UniSTS
RH 3.4 Map	8	1019.1	UniSTS
Cytogenetic Map	3	q24	UniSTS
Cytogenetic Map	8	q31	UniSTS

BF405456

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	8	96,988,815 - 96,989,049 (+)	Marker Load Pipeline
mRatBN7.2	8	88,108,871 - 88,109,107 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	94,821,970 - 94,822,203	NCBI	Rnor6.0
Rnor_5.0	8	94,329,407 - 94,329,640	UniSTS	Rnor5.0
RGSC_v3.4	8	92,407,094 - 92,407,327	UniSTS	RGSC3.4
Celera	8	87,694,655 - 87,694,885	UniSTS
RH 3.4 Map	8	1022.39	UniSTS
Cytogenetic Map	8	q31	UniSTS

RH137779

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	88,144,444 - 88,144,569 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	94,858,001 - 94,858,125	NCBI	Rnor6.0
Rnor_5.0	8	94,365,430 - 94,365,554	UniSTS	Rnor5.0
RGSC_v3.4	8	92,443,040 - 92,443,164	UniSTS	RGSC3.4
Celera	8	87,729,978 - 87,730,102	UniSTS
RH 3.4 Map	8	1013.2	UniSTS
Cytogenetic Map	8	q31	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	11	52	149	82	81	50	89	50	6	316	173	11	123	69	90	31	12	12

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108774	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039081764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039081765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265794	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000014007 ⟹ ENSRNOP00000014006

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	96,988,079 - 97,024,579 (+)	Ensembl
mRatBN7.2 Ensembl	8	88,088,293 - 88,143,886 (+)	Ensembl
Rnor_6.0 Ensembl	8	94,801,336 - 94,857,443 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000081848 ⟹ ENSRNOP00000074708

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	88,088,272 - 88,143,886 (+)	Ensembl
Rnor_6.0 Ensembl	8	94,821,247 - 94,857,057 (+)	Ensembl

RefSeq Acc Id:

NM_001108774 ⟹ NP_001102244

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	96,968,239 - 97,023,838 (+)	NCBI
mRatBN7.2	8	88,088,293 - 88,143,886 (+)	NCBI
Dahl_SR_JrHsd	8	97,882,191 - 97,937,776 (+)	NCBI
Lyon_Normotensive	8	99,978,244 - 100,033,823 (+)	NCBI
Lyon_Hypertensive	8	98,467,514 - 98,523,097 (+)	NCBI
F344_StmMcwi	8	89,923,827 - 89,979,854 (+)	NCBI
Rnor_6.0	8	94,801,336 - 94,857,443 (+)	NCBI
Rnor_5.0	8	94,308,773 - 94,370,052 (+)	NCBI
RGSC_v3.4	8	92,385,844 - 92,442,482 (+)	RGD
Celera	8	87,674,071 - 87,729,420 (+)	RGD

Sequence:

show sequence

GATGAACACAATTATGCAAAACCTGAATGATGCTAAACCCCTGCCGAAGGGAAGGCAAGCCTCA
GACAGGGGAACGACTTAATTCCTGACACTGGCAGGTATCTGGGCCCTGGCAGTTAACTCTTTGG
ACATTGTGAATTGGATACGCTGTGAAGGGCTCTCTGACCAGCATTGCAAACTAGGATGGAGATG
TCTGCCCAGAGGCTGACTTCTAACAGAACATCCCCACAGTCACCATCTAACTCTGACTATACCT
GGGAATACGAGTACTATGAGATCGGACCGGTTTCCTTCGAAGGACTGAAGGCTCACAAATATTC
CATCGTGATTGGATTCTGGGTTGGTCTTGCGGTCTTTGTGATTTTCATGTTTTTTGTGCTGACT
TTGCTGACAAAGACAGGCGCCCCACACCAAGACAATGCGGAGTCCTCAGAGAAGAGGTTCCGAA
TGAACAGCTTTGTGTCAGACTTTGGGAAGCCCCTGGAGTCAGACAAGGTGTTTTCTCGTCAGGG
CAATGAGGAGTCCAGGTCTCTGTTCCACTGTTACATCAATGAAGTGGAACACTTGGACAGGGTT
AAAGTTTGCCACCGAACAACAGCCATTGACAGCGATGTCCATCTCCAGGAAGCCATCAGAAGCA
GTGGGAGGCCTGAGGAGGAGCTAACCAGGTTTATGCAGTTTGACATCCCCAACTTCGTGAACAC
AGACCAGAACTCCTTTGGGGAGGATGATCTTCTTATTTCGGAACCACCTGTTCTTCTAGAAAAT
AAGCCAGTTTCCCAGACATCACGTACAGACCTGGACTGAGACACACTTGTGGGTGCCTTCCTGA
GGATGTGTTCTGTTTCTGTGCAGCAAGAAACCACATGCTACCTACACTTGTGTGTGTGTGTGTG
GAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGAGAGAGAGAGAGAGAGGGGGAGGGAGGAG
GCGGCAGCGGGTGGGGAAGAGGATGATGTTTAAAGTTTAAGACCTAGGCTAGGACTGGGATTTA
GTGATAGAGGGGCAGAATTTGAAGATGGGAGGCACCATTTTGATTTGGGGAGGGTGATTTTTTT
CTCTTTGGATTAAAAATGCCTTGACAGTATTAAAGCTTCTTTATTGAAACGATTAGCCAACACA
TGCAATTGAGCTCCCTCCTGGGTGAGGGCTAGTTCGCTGCAGTCGGGTCTAGCCCTTTCCCACC
ATCCTCTGCCTGTAACAAGCTGCTTTGCCTCTCTGGACTGCCATGGCTTTACAGGTAAGGTGGC
CTGTCCGGAGTAGATGACCTATCCCAGCTCTAG

hide sequence

RefSeq Acc Id:

XM_006243487 ⟹ XP_006243549

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	96,988,020 - 97,024,581 (+)	NCBI
mRatBN7.2	8	88,108,078 - 88,144,636 (+)	NCBI
Rnor_6.0	8	94,821,140 - 94,858,192 (+)	NCBI
Rnor_5.0	8	94,308,773 - 94,370,052 (+)	NCBI

Sequence:

show sequence

ACAGCCTCTGTGCCCAGCACCGCCTCCTCCGCCGCTAGGTCGCAAGCGCGCATCTCCACCGCAC
CGCGGCGCAGGGAGCTACTTGCACAGTTCAGTCCACTGGCGGTGGCGGCACAGCAGCGGTGAGG
CTCGCGCACCGGAGGAGCTGGACCGTGTAAAGCCTGCGGGCCCCCAAGTTCGAAGCCTGCCTTG
CTGCTGAAGTCAGCCCTTCCGGCCTGAGGAGTCAGCAAATCCTGGATATAGCTTCTCGGGCTGA
GCTGAGCATCCAGGGGGCATAGGGCGCCACGACCCAGCCACACCCTCTGCTGCAGGGGAACGAC
TTAATTCCTGACACTGGCAGGTATCTGGGCCCTGGCAGTTAACTCTTTGGACATTGTGAATTGG
ATACGCTGTGAAGGGCTCTCTGACCAGCATTGCAAACTAGGATGGAGATGTCTGCCCAGAGGCT
GACTTCTAACAGAACATCCCCACAGTCACCATCTAACTCTGACTATACCTGGGAATACGAGTAC
TATGAGATCGGACCGGTTTCCTTCGAAGGACTGAAGGCTCACAAATATTCCATCGTGATTGGAT
TCTGGGTTGGTCTTGCGGTCTTTGTGATTTTCATGTTTTTTGTGCTGACTTTGCTGACAAAGAC
AGGCGCCCCACACCAAGACAATGCGGAGTCCTCAGAGAAGAGGTTCCGAATGAACAGCTTTGTG
TCAGACTTTGGGAAGCCCCTGGAGTCAGACAAGGTGTTTTCTCGTCAGGGCAATGAGGAGTCCA
GGTCTCTGTTCCACTGTTACATCAATGAAGTGGAACACTTGGACAGGGTTAAAGTTTGCCACCG
AACAACAGCCATTGACAGCGATGTCCATCTCCAGGAAGCCATCAGAAGCAGTGGGAGGCCTGAG
GAGGAGCTAACCAGGTTTATGCAGTTTGACATCCCCAACTTCGTGAACACAGACCAGAACTCCT
TTGGGGAGGATGATCTTCTTATTTCGGAACCACCTGTTCTTCTAGAAAATAAGCCAGTTTCCCA
GACATCACGTACAGACCTGGACTGAGACACACTTGTGGGTGCCTTCCTGAGGATGTGTTCTGTT
TCTGTGCAGCAAGAAACCACATGCTACCTACACTTGTGTGTGTGTGTGTGGAGAGAGAGAGAGA
GAGAGAGAGAGGGAGGGAGAGAGAGAGAGAGAGAGAGGGGGAGGGAGGAGGCGGCAGCGGGTGG
GGAAGAGGATGATGTTTAAAGTTTAAGACCTAGGCTAGGACTGGGATTTAGTGATAGAGGGGCA
GAATTTGAAGATGGGAGGCACCATTTTGATTTGGGGAGGGTGATTTTTTTCTCTTTGGATTAAA
AATGCCTTGACAGTATTAAAGCTTCTTTATTGAAACGATTAGCCAACACATGCAATTGAGCTCC
CTCCTGGGTGAGGGCTAGTTCGCTGCAGTCGGGTCTAGCCCTTTCCCACCATCCTCTGCCTGTA
ACAAGCTGCTTTGCCTCTCTGGACTGCCATGGCTTTACAGGTAAGGTGGCCTGTCCGGAGTAGA
TGACCTATCCCAGCTCTAGAATTTTGTGACTTTCAAACTTAGCTATAAGATAAGCTAAGAAACG
CATAAGCAGTAGAAAATACCACACGGCATCGAGGCTTTCATGGCAGGTTCTTCAGGTCTCGGTG
CTCTCCCTTCACTCAGTCCTTCACTGGGTCACACTTTCGGTAGGGAAATCTTTACTAGGAGACC
AGGAGACATGAGACTTGCACGCACTGTGGACAGTGTCTCTGCTGGGTGTTGCTACAGCAATTTA
TGTGCTGAACGCCCCCCCCCCCCGCTTTAAACTGGGATAGCTTCGACTCCAGCGACTACCAGCC
CAAACTGTTTTCACAAGCATCTGTGCTCTTGAAGAATGGTAGAGCAGATTGTTATTTGGCTGAT
GTGAGTCCCTTCTGGATGTCCCTGTGTTTGCATCCCTGGGCTCACCCTTCTGAACTATTTGGCT
TCAGAACAGGAAGATACCGCTCGCCATGTCTGCGTGGCAGATGTGTAGGTGACGGCTGCCTGGC
TTGGAGCTGAGAGGGTCCGTGGGTTTTTTGCCACAGTAACAGATGTTCAGGATTGGAGGATGTT
AATATGAGCCACATGATGTCCGTCTCACAAAGCAAGCAGCCCCCTTTGCTGGAGTCAGAAACAA
CCCAGTCCTGCACACACAGAGTTGTACGCATGAGCAGCTGCTAATCTCTGGGTGGCATCTTCTT
TATGAATTTGTTCACCATTTGTCTTGCTTAAGTTGCAAAATAAATGCATTTGATCGCACAGGGA

hide sequence

RefSeq Acc Id:

XM_006243488 ⟹ XP_006243550

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	96,988,011 - 97,024,581 (+)	NCBI
mRatBN7.2	8	88,108,067 - 88,144,636 (+)	NCBI
Rnor_6.0	8	94,821,140 - 94,858,192 (+)	NCBI
Rnor_5.0	8	94,308,773 - 94,370,052 (+)	NCBI

Sequence:

show sequence

ACAGCCTCTGTGCCCAGCACCGCCTCCTCCGCCGCTAGGTCGCAAGCGCGCATCTCCACCGCAC
CGCGGCGCAGGGAGCTACTTGCACAGTTCAGTCCACTGGCGGTGGCGGCACAGCAGCGGTGAGG
CTCGCGCACCGGAGGAGCTGGACCGTGTAAAGCCTGCGGGGAACGACTTAATTCCTGACACTGG
CAGGTATCTGGGCCCTGGCAGTTAACTCTTTGGACATTGTGAATTGGATACGCTGTGAAGGGCT
CTCTGACCAGCATTGCAAACTAGGATGGAGATGTCTGCCCAGAGGCTGACTTCTAACAGAACAT
CCCCACAGTCACCATCTAACTCTGACTATACCTGGGAATACGAGTACTATGAGATCGGACCGGT
TTCCTTCGAAGGACTGAAGGCTCACAAATATTCCATCGTGATTGGATTCTGGGTTGGTCTTGCG
GTCTTTGTGATTTTCATGTTTTTTGTGCTGACTTTGCTGACAAAGACAGGCGCCCCACACCAAG
ACAATGCGGAGTCCTCAGAGAAGAGGTTCCGAATGAACAGCTTTGTGTCAGACTTTGGGAAGCC
CCTGGAGTCAGACAAGGTGTTTTCTCGTCAGGGCAATGAGGAGTCCAGGTCTCTGTTCCACTGT
TACATCAATGAAGTGGAACACTTGGACAGGGTTAAAGTTTGCCACCGAACAACAGCCATTGACA
GCGATGTCCATCTCCAGGAAGCCATCAGAAGCAGTGGGAGGCCTGAGGAGGAGCTAACCAGGTT
TATGCAGTTTGACATCCCCAACTTCGTGAACACAGACCAGAACTCCTTTGGGGAGGATGATCTT
CTTATTTCGGAACCACCTGTTCTTCTAGAAAATAAGCCAGTTTCCCAGACATCACGTACAGACC
TGGACTGAGACACACTTGTGGGTGCCTTCCTGAGGATGTGTTCTGTTTCTGTGCAGCAAGAAAC
CACATGCTACCTACACTTGTGTGTGTGTGTGTGGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGG
AGAGAGAGAGAGAGAGAGAGGGGGAGGGAGGAGGCGGCAGCGGGTGGGGAAGAGGATGATGTTT
AAAGTTTAAGACCTAGGCTAGGACTGGGATTTAGTGATAGAGGGGCAGAATTTGAAGATGGGAG
GCACCATTTTGATTTGGGGAGGGTGATTTTTTTCTCTTTGGATTAAAAATGCCTTGACAGTATT
AAAGCTTCTTTATTGAAACGATTAGCCAACACATGCAATTGAGCTCCCTCCTGGGTGAGGGCTA
GTTCGCTGCAGTCGGGTCTAGCCCTTTCCCACCATCCTCTGCCTGTAACAAGCTGCTTTGCCTC
TCTGGACTGCCATGGCTTTACAGGTAAGGTGGCCTGTCCGGAGTAGATGACCTATCCCAGCTCT
AGAATTTTGTGACTTTCAAACTTAGCTATAAGATAAGCTAAGAAACGCATAAGCAGTAGAAAAT
ACCACACGGCATCGAGGCTTTCATGGCAGGTTCTTCAGGTCTCGGTGCTCTCCCTTCACTCAGT
CCTTCACTGGGTCACACTTTCGGTAGGGAAATCTTTACTAGGAGACCAGGAGACATGAGACTTG
CACGCACTGTGGACAGTGTCTCTGCTGGGTGTTGCTACAGCAATTTATGTGCTGAACGCCCCCC
CCCCCCGCTTTAAACTGGGATAGCTTCGACTCCAGCGACTACCAGCCCAAACTGTTTTCACAAG
CATCTGTGCTCTTGAAGAATGGTAGAGCAGATTGTTATTTGGCTGATGTGAGTCCCTTCTGGAT
GTCCCTGTGTTTGCATCCCTGGGCTCACCCTTCTGAACTATTTGGCTTCAGAACAGGAAGATAC
CGCTCGCCATGTCTGCGTGGCAGATGTGTAGGTGACGGCTGCCTGGCTTGGAGCTGAGAGGGTC
CGTGGGTTTTTTGCCACAGTAACAGATGTTCAGGATTGGAGGATGTTAATATGAGCCACATGAT
GTCCGTCTCACAAAGCAAGCAGCCCCCTTTGCTGGAGTCAGAAACAACCCAGTCCTGCACACAC
AGAGTTGTACGCATGAGCAGCTGCTAATCTCTGGGTGGCATCTTCTTTATGAATTTGTTCACCA
TTTGTCTTGCTTAAGTTGCAAAATAAATGCATTTGATCGCACAGGGA

hide sequence

RefSeq Acc Id:

XM_017595743 ⟹ XP_017451232

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	96,988,028 - 97,024,581 (+)	NCBI
mRatBN7.2	8	88,108,126 - 88,144,636 (+)	NCBI
Rnor_6.0	8	94,821,140 - 94,858,192 (+)	NCBI

Sequence:

show sequence

ACAGCCTCTGTGCCCAGCACCGCCTCCTCCGCCGCTAGGTCGCAAGCGCGCATCTCCACCGCAC
CGCGGCGCAGGGAGCTACTTGCACAGTTCAGTCCACTGGCGGTGGCGGCACAGCAGCGGTGAGG
CTCGCGCACCGGAGGAGCTGGACCGTGGGAACGACTTAATTCCTGACACTGGCAGGTATCTGGG
CCCTGGCAGTTAACTCTTTGGACATTGTGAATTGGATACGCTGTGAAGGGCTCTCTGACCAGCA
TTGCAAACTAGGATGGAGATGTCTGCCCAGAGGCTGACTTCTAACAGAACATCCCCACAGTCAC
CATCTAACTCTGACTATACCTGGGAATACGAGTACTATGAGATCGGACCGGTTTCCTTCGAAGG
ACTGAAGGCTCACAAATATTCCATCGTGATTGGATTCTGGGTTGGTCTTGCGGTCTTTGTGATT
TTCATGTTTTTTGTGCTGACTTTGCTGACAAAGACAGGCGCCCCACACCAAGACAATGCGGAGT
CCTCAGAGAAGAGGTTCCGAATGAACAGCTTTGTGTCAGACTTTGGGAAGCCCCTGGAGTCAGA
CAAGGTGTTTTCTCGTCAGGGCAATGAGGAGTCCAGGTCTCTGTTCCACTGTTACATCAATGAA
GTGGAACACTTGGACAGGGTTAAAGTTTGCCACCGAACAACAGCCATTGACAGCGATGTCCATC
TCCAGGAAGCCATCAGAAGCAGTGGGAGGCCTGAGGAGGAGCTAACCAGGTTTATGCAGTTTGA
CATCCCCAACTTCGTGAACACAGACCAGAACTCCTTTGGGGAGGATGATCTTCTTATTTCGGAA
CCACCTGTTCTTCTAGAAAATAAGCCAGTTTCCCAGACATCACGTACAGACCTGGACTGAGACA
CACTTGTGGGTGCCTTCCTGAGGATGTGTTCTGTTTCTGTGCAGCAAGAAACCACATGCTACCT
ACACTTGTGTGTGTGTGTGTGGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGAGAGAGAG
AGAGAGAGGGGGAGGGAGGAGGCGGCAGCGGGTGGGGAAGAGGATGATGTTTAAAGTTTAAGAC
CTAGGCTAGGACTGGGATTTAGTGATAGAGGGGCAGAATTTGAAGATGGGAGGCACCATTTTGA
TTTGGGGAGGGTGATTTTTTTCTCTTTGGATTAAAAATGCCTTGACAGTATTAAAGCTTCTTTA
TTGAAACGATTAGCCAACACATGCAATTGAGCTCCCTCCTGGGTGAGGGCTAGTTCGCTGCAGT
CGGGTCTAGCCCTTTCCCACCATCCTCTGCCTGTAACAAGCTGCTTTGCCTCTCTGGACTGCCA
TGGCTTTACAGGTAAGGTGGCCTGTCCGGAGTAGATGACCTATCCCAGCTCTAGAATTTTGTGA
CTTTCAAACTTAGCTATAAGATAAGCTAAGAAACGCATAAGCAGTAGAAAATACCACACGGCAT
CGAGGCTTTCATGGCAGGTTCTTCAGGTCTCGGTGCTCTCCCTTCACTCAGTCCTTCACTGGGT
CACACTTTCGGTAGGGAAATCTTTACTAGGAGACCAGGAGACATGAGACTTGCACGCACTGTGG
ACAGTGTCTCTGCTGGGTGTTGCTACAGCAATTTATGTGCTGAACGCCCCCCCCCCCCGCTTTA
AACTGGGATAGCTTCGACTCCAGCGACTACCAGCCCAAACTGTTTTCACAAGCATCTGTGCTCT
TGAAGAATGGTAGAGCAGATTGTTATTTGGCTGATGTGAGTCCCTTCTGGATGTCCCTGTGTTT
GCATCCCTGGGCTCACCCTTCTGAACTATTTGGCTTCAGAACAGGAAGATACCGCTCGCCATGT
CTGCGTGGCAGATGTGTAGGTGACGGCTGCCTGGCTTGGAGCTGAGAGGGTCCGTGGGTTTTTT
GCCACAGTAACAGATGTTCAGGATTGGAGGATGTTAATATGAGCCACATGATGTCCGTCTCACA
AAGCAAGCAGCCCCCTTTGCTGGAGTCAGAAACAACCCAGTCCTGCACACACAGAGTTGTACGC
ATGAGCAGCTGCTAATCTCTGGGTGGCATCTTCTTTATGAATTTGTTCACCATTTGTCTTGCTT
AAGTTGCAAAATAAATGCATTTGATCGCACAGGGA

hide sequence

RefSeq Acc Id:

XM_039081764 ⟹ XP_038937692

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	97,006,952 - 97,024,581 (+)	NCBI
mRatBN7.2	8	88,127,310 - 88,144,636 (+)	NCBI

RefSeq Acc Id:

XM_039081765 ⟹ XP_038937693

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	97,012,124 - 97,024,581 (+)	NCBI
mRatBN7.2	8	88,132,216 - 88,144,636 (+)	NCBI

RefSeq Acc Id:

XM_063265792 ⟹ XP_063121862

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	96,988,019 - 97,024,581 (+)	NCBI

RefSeq Acc Id:

XM_063265794 ⟹ XP_063121864

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	96,988,065 - 97,024,581 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102244	(Get FASTA)	NCBI Sequence Viewer
	NP_001423458	(Get FASTA)	NCBI Sequence Viewer
	NP_001423459	(Get FASTA)	NCBI Sequence Viewer
	NP_001423460	(Get FASTA)	NCBI Sequence Viewer
	NP_001423461	(Get FASTA)	NCBI Sequence Viewer
	XP_006243549	(Get FASTA)	NCBI Sequence Viewer
	XP_006243550	(Get FASTA)	NCBI Sequence Viewer
	XP_017451232	(Get FASTA)	NCBI Sequence Viewer
	XP_038937692	(Get FASTA)	NCBI Sequence Viewer
	XP_038937693	(Get FASTA)	NCBI Sequence Viewer
	XP_063121862	(Get FASTA)	NCBI Sequence Viewer
	XP_063121864	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL77604	(Get FASTA)	NCBI Sequence Viewer
	EDL77605	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000014006
	ENSRNOP00000014006.6

RefSeq Acc Id:

NP_001102244 ⟸ NM_001108774

- UniProtKB:

D4AE95 (UniProtKB/TrEMBL), A6I1X3 (UniProtKB/TrEMBL), A0A0G2K8R5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEMSAQRLTSNRTSPQSPSNSDYTWEYEYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFMFF
VLTLLTKTGAPHQDNAESSEKRFRMNSFVSDFGKPLESDKVFSRQGNEESRSLFHCYINEVEHL
DRVKVCHRTTAIDSDVHLQEAIRSSGRPEEELTRFMQFDIPNFVNTDQNSFGEDDLLISEPPVL
LENKPVSQTSRTDLD

hide sequence

RefSeq Acc Id:

XP_006243549 ⟸ XM_006243487

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEMSAQRLTSNRTSPQSPSNSDYTWEYEYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFMFF
VLTLLTKTGAPHQDNAESSEKRFRMNSFVSDFGKPLESDKVFSRQGNEESRSLFHCYINEVEHL
DRVKVCHRTTAIDSDVHLQEAIRSSGRPEEELTRFMQFDIPNFVNTDQNSFGEDDLLISEPPVL
LENKPVSQTSRTDLD

hide sequence

RefSeq Acc Id:

XP_006243550 ⟸ XM_006243488

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEMSAQRLTSNRTSPQSPSNSDYTWEYEYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFMFF
VLTLLTKTGAPHQDNAESSEKRFRMNSFVSDFGKPLESDKVFSRQGNEESRSLFHCYINEVEHL
DRVKVCHRTTAIDSDVHLQEAIRSSGRPEEELTRFMQFDIPNFVNTDQNSFGEDDLLISEPPVL
LENKPVSQTSRTDLD

hide sequence

RefSeq Acc Id:

XP_017451232 ⟸ XM_017595743

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEMSAQRLTSNRTSPQSPSNSDYTWEYEYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFMFF
VLTLLTKTGAPHQDNAESSEKRFRMNSFVSDFGKPLESDKVFSRQGNEESRSLFHCYINEVEHL
DRVKVCHRTTAIDSDVHLQEAIRSSGRPEEELTRFMQFDIPNFVNTDQNSFGEDDLLISEPPVL
LENKPVSQTSRTDLD

hide sequence

Ensembl Acc Id:

ENSRNOP00000014006 ⟸ ENSRNOT00000014007

Ensembl Acc Id:

ENSRNOP00000074708 ⟸ ENSRNOT00000081848

RefSeq Acc Id:	XP_038937692 ⟸ XM_039081764
- Peptide Label:	isoform X1
- UniProtKB:	D4AE95 (UniProtKB/TrEMBL), A6I1X3 (UniProtKB/TrEMBL), A0A0G2K8R5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038937693 ⟸ XM_039081765
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063121862 ⟸ XM_063265792
- Peptide Label:	isoform X1
- UniProtKB:	A6I1X3 (UniProtKB/TrEMBL), D4AE95 (UniProtKB/TrEMBL), A0A0G2K8R5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121864 ⟸ XM_063265794
- Peptide Label:	isoform X1

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AE95-F1-model_v2	AlphaFold	D4AE95	1-207	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696165

Promoter ID:

EPDNEW_R6690

Type:

single initiation site

Name:

Mrap2_1

Description:

melanocortin 2 receptor accessory protein 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	94,801,314 - 94,801,374	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309873	AgrOrtholog
BioCyc Gene	G2FUF-29631	BioCyc
Ensembl Genes	ENSRNOG00000010545	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000014007	ENTREZGENE
	ENSRNOT00000014007.9	UniProtKB/TrEMBL
InterPro	MRAP	UniProtKB/TrEMBL
KEGG Report	rno:363112	UniProtKB/TrEMBL
NCBI Gene	363112	ENTREZGENE
PANTHER	MELANOCORTIN-2 RECEPTOR ACCESSORY PROTEIN 2	UniProtKB/TrEMBL
	PTHR28675	UniProtKB/TrEMBL
Pfam	MRAP	UniProtKB/TrEMBL
PhenoGen	Mrap2	PhenoGen
RatGTEx	ENSRNOG00000010545	RatGTEx
UniProt	A0A0G2K8R5	ENTREZGENE
	A6I1X3	ENTREZGENE, UniProtKB/TrEMBL
	D4AE95	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-05-21	Mrap2	melanocortin 2 receptor accessory protein 2	RGD1309873	similar to hypothetical protein BC010003	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1309873	similar to hypothetical protein BC010003	RGD1309873_predicted	similar to hypothetical protein BC010003 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1309873_predicted	similar to hypothetical protein BC010003 (predicted)	LOC363112_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC363112_predicted	similar to hypothetical protein BC010003 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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