Uba7 (ubiquitin-like modifier activating enzyme 7) - Rat Genome Database

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Gene: Uba7 (ubiquitin-like modifier activating enzyme 7) Rattus norvegicus
Analyze
Symbol: Uba7
Name: ubiquitin-like modifier activating enzyme 7
RGD ID: 1308323
Description: Predicted to enable ISG15 activating enzyme activity and ubiquitin-protein transferase activity. Predicted to be involved in DNA damage response; ISG15-protein conjugation; and innate immune response. Predicted to act upstream of or within modification-dependent protein catabolic process. Predicted to be located in nucleus. Predicted to be active in cytoplasm. Orthologous to human UBA7 (ubiquitin like modifier activating enzyme 7); PARTICIPATES IN Parkinson's disease pathway; ubiquitin/proteasome degradation pathway; INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 17beta-estradiol 3-benzoate.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC301000; Ube1l; ubiquitin-activating enzyme E1-like; ubiquitin-like modifier-activating enzyme 7
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88117,543,902 - 117,552,709 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8117,543,957 - 117,556,142 (+)EnsemblGRCr8
mRatBN7.28108,665,289 - 108,674,097 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8108,665,292 - 108,674,099 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8114,291,762 - 114,300,571 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08112,491,085 - 112,499,894 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08110,333,725 - 110,342,534 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08116,754,178 - 116,766,765 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8116,754,178 - 116,764,126 (+)Ensemblrn6Rnor6.0
Rnor_5.08116,108,502 - 116,121,088 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48113,244,829 - 113,253,636 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8107,969,920 - 107,978,739 (+)NCBICelera
RGSC_v3.18113,264,139 - 113,272,984 (+)NCBI
Cytogenetic Map8q32NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
4,4'-sulfonyldiphenol  (ISO)
acetamide  (EXP)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
antirheumatic drug  (ISO)
Azoxymethane  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium dichloride  (EXP)
carbon nanotube  (ISO)
chloroprene  (EXP)
chromium(6+)  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (ISO)
crocidolite asbestos  (ISO)
Cuprizon  (EXP)
curcumin  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dextran sulfate  (ISO)
dicrotophos  (ISO)
dieldrin  (EXP)
diethylstilbestrol  (EXP)
dioxygen  (EXP)
diquat  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (EXP)
ethylparaben  (ISO)
Evodiamine  (ISO)
fenthion  (ISO)
fenvalerate  (EXP)
furan  (EXP)
glycidyl methacrylate  (ISO)
hydrogen peroxide  (ISO)
iron dichloride  (ISO)
lead diacetate  (ISO)
Licochalcone B  (ISO)
lipopolysaccharide  (ISO)
methidathion  (ISO)
N-acetyl-L-cysteine  (ISO)
okadaic acid  (ISO)
orphenadrine  (EXP)
oxaliplatin  (EXP)
paraquat  (EXP,ISO)
pentachlorophenol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
S-nitrosoglutathione  (ISO)
selenium atom  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sotorasib  (ISO)
succimer  (ISO)
sulindac sulfide  (ISO)
tamibarotene  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
trametinib  (ISO)
triclosan  (ISO)
triphenyl phosphate  (ISO)
Triptolide  (EXP)
urethane  (ISO)
valproic acid  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15485925   PMID:16139798   PMID:16382139   PMID:16428300   PMID:18583345   PMID:19073728  


Genomics

Comparative Map Data
Uba7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88117,543,902 - 117,552,709 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8117,543,957 - 117,556,142 (+)EnsemblGRCr8
mRatBN7.28108,665,289 - 108,674,097 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8108,665,292 - 108,674,099 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8114,291,762 - 114,300,571 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08112,491,085 - 112,499,894 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08110,333,725 - 110,342,534 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08116,754,178 - 116,766,765 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8116,754,178 - 116,764,126 (+)Ensemblrn6Rnor6.0
Rnor_5.08116,108,502 - 116,121,088 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48113,244,829 - 113,253,636 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8107,969,920 - 107,978,739 (+)NCBICelera
RGSC_v3.18113,264,139 - 113,272,984 (+)NCBI
Cytogenetic Map8q32NCBI
UBA7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38349,805,209 - 49,813,953 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl349,805,205 - 49,814,151 (-)Ensemblhg38GRCh38
GRCh37349,842,642 - 49,851,386 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36349,817,642 - 49,826,395 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34349,817,642 - 49,826,395NCBI
Celera349,808,165 - 49,816,714 (-)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef349,901,687 - 49,910,450 (-)NCBIHuRef
CHM1_1349,794,699 - 49,803,452 (-)NCBICHM1_1
T2T-CHM13v2.0349,835,086 - 49,843,840 (-)NCBIT2T-CHM13v2.0
Uba7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399107,852,766 - 107,861,255 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9107,852,704 - 107,861,259 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm389107,975,567 - 107,984,056 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9107,975,505 - 107,984,060 (+)Ensemblmm10GRCm38
MGSCv379107,877,898 - 107,886,387 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv369107,833,668 - 107,842,157 (+)NCBIMGSCv36mm8
Celera9107,583,980 - 107,592,467 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map959.07NCBI
Uba7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555321,695,956 - 1,706,676 (-)Ensembl
ChiLan1.0NW_0049555321,697,667 - 1,706,668 (-)NCBIChiLan1.0ChiLan1.0
UBA7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2249,791,441 - 49,800,294 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1349,796,214 - 49,805,018 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0349,737,015 - 49,745,783 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1350,973,211 - 50,981,997 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl350,973,211 - 50,981,997 (-)EnsemblpanPan2panpan1.1
UBA7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12039,459,981 - 39,468,919 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2039,460,216 - 39,468,917 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2039,380,946 - 39,389,763 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02039,816,971 - 39,825,794 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2039,816,974 - 39,838,844 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12039,184,003 - 39,192,827 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02039,588,249 - 39,597,062 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02039,867,799 - 39,876,629 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Uba7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560264,651,699 - 64,660,747 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365291,412,194 - 1,421,197 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365291,412,196 - 1,421,216 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UBA7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1332,332,367 - 32,341,217 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11332,330,536 - 32,341,300 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21335,509,800 - 35,520,514 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UBA7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12211,208,744 - 11,217,834 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2211,207,417 - 11,217,734 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041155,780,703 - 155,789,500 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Uba7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247303,718,573 - 3,730,097 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247303,720,516 - 3,729,586 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Uba7
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1899,307,149 - 99,315,745 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Uba7
122 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:148
Count of miRNA genes:101
Interacting mature miRNAs:117
Transcripts:ENSRNOT00000068295
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)8105462581132782436Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)882352698127352698Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)861019838121662124Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)849849908118871671Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)880768445125768445Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)880768445125768445Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)870041301121080908Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)868690349119799881Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)884192326129192326Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8103375781129871912Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)8102413464132782436Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)855428333127966348Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
631217Activ1Activity QTL 115.9voluntary movement trait (VT:0003491)number of photobeam interruptions in an experimental apparatus (CMO:0001517)8111249511117802327Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
2313400Anxrr25Anxiety related response QTL 25aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)898145073122898010Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)880768445125768445Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)880768445125768445Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)891340911131690273Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 160 91 90 59 92 59 6 356 192 11 139 81 92 31 14 14

Sequence


Ensembl Acc Id: ENSRNOT00000068295   ⟹   ENSRNOP00000062984
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8117,543,957 - 117,556,142 (+)Ensembl
mRatBN7.2 Ensembl8108,665,292 - 108,674,099 (+)Ensembl
Rnor_6.0 Ensembl8116,754,178 - 116,762,985 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000084429   ⟹   ENSRNOP00000074046
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8117,543,957 - 117,552,708 (+)Ensembl
mRatBN7.2 Ensembl8108,665,356 - 108,674,084 (+)Ensembl
Rnor_6.0 Ensembl8116,754,205 - 116,764,126 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097917   ⟹   ENSRNOP00000081578
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8117,543,957 - 117,552,800 (+)Ensembl
mRatBN7.2 Ensembl8108,665,292 - 108,674,099 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000138481   ⟹   ENSRNOP00000101886
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8117,543,957 - 117,552,740 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000167178   ⟹   ENSRNOP00000111246
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8117,543,957 - 117,548,593 (+)Ensembl
RefSeq Acc Id: NM_001393920   ⟹   NP_001380849
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88117,543,902 - 117,552,709 (+)NCBI
mRatBN7.28108,665,290 - 108,674,097 (+)NCBI
RefSeq Acc Id: XM_006243741   ⟹   XP_006243803
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88117,543,906 - 117,552,705 (+)NCBI
mRatBN7.28108,665,291 - 108,674,097 (+)NCBI
Rnor_6.08116,754,226 - 116,762,986 (+)NCBI
Rnor_5.08116,108,502 - 116,121,088 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039081230   ⟹   XP_038937158
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88117,543,906 - 117,552,705 (+)NCBI
mRatBN7.28108,665,289 - 108,674,097 (+)NCBI
RefSeq Acc Id: XM_039081231   ⟹   XP_038937159
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88117,543,906 - 117,552,705 (+)NCBI
mRatBN7.28108,665,290 - 108,674,097 (+)NCBI
RefSeq Acc Id: XM_039081232   ⟹   XP_038937160
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88117,544,216 - 117,552,705 (+)NCBI
mRatBN7.28108,665,601 - 108,674,097 (+)NCBI
RefSeq Acc Id: XM_039081233   ⟹   XP_038937161
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88117,543,906 - 117,549,897 (+)NCBI
mRatBN7.28108,665,289 - 108,671,283 (+)NCBI
RefSeq Acc Id: XP_006243803   ⟸   XM_006243741
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K735 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000074046   ⟸   ENSRNOT00000084429
Ensembl Acc Id: ENSRNOP00000062984   ⟸   ENSRNOT00000068295
RefSeq Acc Id: XP_038937158   ⟸   XM_039081230
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038937161   ⟸   XM_039081233
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038937159   ⟸   XM_039081231
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038937160   ⟸   XM_039081232
- Peptide Label: isoform X4
Ensembl Acc Id: ENSRNOP00000081578   ⟸   ENSRNOT00000097917
RefSeq Acc Id: NP_001380849   ⟸   NM_001393920
- UniProtKB: A0A0G2K735 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000101886   ⟸   ENSRNOT00000138481
Ensembl Acc Id: ENSRNOP00000111246   ⟸   ENSRNOT00000167178

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K735-F1-model_v2 AlphaFold A0A0G2K735 1-989 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696307
Promoter ID:EPDNEW_R6810
Type:multiple initiation site
Name:Uba7_1
Description:ubiquitin-like modifier activating enzyme 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.08116,754,237 - 116,754,297EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308323 AgrOrtholog
BioCyc Gene G2FUF-29165 BioCyc
BioCyc Pathway PWY-7511 [protein ubiquitination] BioCyc
BioCyc Pathway Image PWY-7511 BioCyc
Ensembl Genes ENSRNOG00000029195 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000068295.4 UniProtKB/TrEMBL
  ENSRNOT00000084429 ENTREZGENE
  ENSRNOT00000084429.3 UniProtKB/TrEMBL
  ENSRNOT00000097917.2 UniProtKB/TrEMBL
  ENSRNOT00000138481.1 UniProtKB/TrEMBL
  ENSRNOT00000167178.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.2660 UniProtKB/TrEMBL
  1.10.10.520 UniProtKB/TrEMBL
  2.40.30.180 UniProtKB/TrEMBL
  3.10.290.60 UniProtKB/TrEMBL
  3.50.50.80 UniProtKB/TrEMBL
  NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
  Ubiquitin-activating enzyme E1, inactive adenylation domain, subdomain 2 UniProtKB/TrEMBL
InterPro E1_4HB UniProtKB/TrEMBL
  E1_FCCH UniProtKB/TrEMBL
  E1_FCCH_sf UniProtKB/TrEMBL
  ThiF/MoeB/HesA UniProtKB/TrEMBL
  ThiF_NAD_FAD-bd UniProtKB/TrEMBL
  Ub-activating_enz_e1_C UniProtKB/TrEMBL
  Ub-E1_IAD_1 UniProtKB/TrEMBL
  Ub_act_enz_dom_a_sf UniProtKB/TrEMBL
  UBA_E1_C_sf UniProtKB/TrEMBL
  Ubi_acti_E1_SCCH UniProtKB/TrEMBL
  Ubiquitin-activating_enz UniProtKB/TrEMBL
  Ubiquitin-activating_enzyme UniProtKB/TrEMBL
  UBQ-activ_enz_E1 UniProtKB/TrEMBL
  UBQ-activ_enz_E1-like UniProtKB/TrEMBL
  UBQ-activ_enz_E1_Cys_AS UniProtKB/TrEMBL
NCBI Gene 301000 ENTREZGENE
PANTHER PTHR10953 UniProtKB/TrEMBL
  UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 7 UniProtKB/TrEMBL
Pfam E1_4HB UniProtKB/TrEMBL
  E1_FCCH UniProtKB/TrEMBL
  E1_UFD UniProtKB/TrEMBL
  ThiF UniProtKB/TrEMBL
  UBA_e1_thiolCys UniProtKB/TrEMBL
PhenoGen Uba7 PhenoGen
PRINTS UBIQUITINACT UniProtKB/TrEMBL
PROSITE UBIQUITIN_ACTIVAT_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000029195 RatGTEx
SMART UBA_e1_C UniProtKB/TrEMBL
Superfamily-SCOP MoeB UniProtKB/TrEMBL
UniProt A0A0G2K735 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G652_RAT UniProtKB/TrEMBL
  A0ABK0LJV9_RAT UniProtKB/TrEMBL
  A0ABK0M6K8_RAT UniProtKB/TrEMBL
  D3ZEU5_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-11 Uba7  ubiquitin-like modifier activating enzyme 7  Ube1l  ubiquitin-activating enzyme E1-like   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Ube1l  ubiquitin-activating enzyme E1-like   Ube1l_predicted  ubiquitin-activating enzyme E1-like (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Ube1l_predicted  ubiquitin-activating enzyme E1-like (predicted)      Symbol and Name status set to approved 70820 APPROVED