Dhx15 (DEAH-box helicase 15) - Rat Genome Database

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Gene: Dhx15 (DEAH-box helicase 15) Rattus norvegicus
Analyze
Symbol: Dhx15
Name: DEAH-box helicase 15
RGD ID: 1308072
Description: Predicted to enable RNA helicase activity and double-stranded RNA binding activity. Involved in response to alkaloid and response to toxic substance. Predicted to be located in nuclear speck. Predicted to be part of U12-type spliceosomal complex and U2-type post-mRNA release spliceosomal complex. Orthologous to human DHX15 (DEAH-box helicase 15); PARTICIPATES IN ribosome biogenesis pathway; spliceosome pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: ATP-dependent RNA helicase DHX15; DEAH (Asp-Glu-Ala-His) box helicase 15; DEAH (Asp-Glu-Ala-His) box polypeptide 15; LOC100910750; LOC289693; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like; putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15; putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81462,999,886 - 63,037,829 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1462,999,877 - 63,037,828 (+)EnsemblGRCr8
mRatBN7.21458,787,147 - 58,825,083 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1458,787,127 - 58,825,088 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1463,191,245 - 63,229,168 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01464,504,562 - 64,542,512 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01460,901,353 - 60,939,295 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01461,136,740 - 61,174,880 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1461,136,746 - 61,174,880 (+)Ensemblrn6Rnor6.0
Rnor_5.01461,248,770 - 61,286,905 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41463,563,251 - 63,601,200 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1457,883,422 - 57,921,283 (+)NCBICelera
RGSC_v3.11463,565,638 - 63,603,584 (+)NCBI
Cytogenetic Map14q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2-bromohexadecanoic acid  (ISO)
4,4'-sulfonyldiphenol  (ISO)
5-fluorouracil  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzo[k]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
decabromodiphenyl ether  (ISO)
deguelin  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
enzyme inhibitor  (ISO)
flutamide  (EXP)
gentamycin  (EXP)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
mercury dibromide  (ISO)
methotrexate  (ISO)
methylparaben  (ISO)
nefazodone  (EXP)
Nutlin-3  (ISO)
okadaic acid  (ISO)
pentachlorophenol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenylmercury acetate  (ISO)
PhIP  (EXP)
pinosylvin  (ISO)
progesterone  (ISO)
propiconazole  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
sodium arsenite  (ISO)
tamoxifen  (ISO)
tebufenpyrad  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
trans-pinosylvin  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
Yessotoxin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. DExD/H-box RNA helicases in ribosome biogenesis. Martin R, etal., RNA Biol. 2013 Jan;10(1):4-18. doi: 10.4161/rna.21879. Epub 2012 Aug 24.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
8. RNA-interacting proteins act as site-specific repressors of ADAR2-mediated RNA editing and fluctuate upon neuronal stimulation. Tariq A, etal., Nucleic Acids Res. 2013 Feb 1;41(4):2581-93. doi: 10.1093/nar/gks1353. Epub 2012 Dec 28.
Additional References at PubMed
PMID:15146077   PMID:19103666   PMID:21266579   PMID:22658674   PMID:22681889   PMID:24625528  


Genomics

Comparative Map Data
Dhx15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81462,999,886 - 63,037,829 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1462,999,877 - 63,037,828 (+)EnsemblGRCr8
mRatBN7.21458,787,147 - 58,825,083 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1458,787,127 - 58,825,088 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1463,191,245 - 63,229,168 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01464,504,562 - 64,542,512 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01460,901,353 - 60,939,295 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01461,136,740 - 61,174,880 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1461,136,746 - 61,174,880 (+)Ensemblrn6Rnor6.0
Rnor_5.01461,248,770 - 61,286,905 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41463,563,251 - 63,601,200 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1457,883,422 - 57,921,283 (+)NCBICelera
RGSC_v3.11463,565,638 - 63,603,584 (+)NCBI
Cytogenetic Map14q11NCBI
DHX15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38424,527,475 - 24,584,554 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl424,517,441 - 24,584,603 (-)Ensemblhg38GRCh38
GRCh37424,529,098 - 24,586,177 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36424,138,185 - 24,195,282 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34424,205,369 - 24,262,446NCBI
Celera424,978,492 - 25,035,556 (-)NCBICelera
Cytogenetic Map4p15.2NCBI
HuRef423,871,170 - 23,928,446 (-)NCBIHuRef
CHM1_1424,528,443 - 24,585,513 (-)NCBICHM1_1
T2T-CHM13v2.0424,509,189 - 24,566,252 (-)NCBIT2T-CHM13v2.0
Dhx15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39552,307,545 - 52,347,888 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl552,307,545 - 52,347,856 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38552,150,203 - 52,190,546 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl552,150,203 - 52,190,514 (-)Ensemblmm10GRCm38
MGSCv37552,541,448 - 52,581,758 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36552,438,462 - 52,478,642 (-)NCBIMGSCv36mm8
Celera549,520,199 - 49,560,564 (-)NCBICelera
Cytogenetic Map5C1NCBI
cM Map527.51NCBI
Dhx15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955480451,126 - 502,226 (+)Ensembl
ChiLan1.0NW_004955480451,126 - 502,226 (+)NCBIChiLan1.0ChiLan1.0
DHX15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2324,777,798 - 24,835,999 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1424,974,453 - 25,031,441 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0418,931,119 - 18,988,048 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1424,216,726 - 24,273,790 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl424,217,123 - 24,273,585 (-)EnsemblpanPan2panpan1.1
DHX15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1385,549,946 - 85,609,598 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl385,549,981 - 85,609,612 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha388,063,151 - 88,122,772 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0386,525,098 - 86,584,732 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl386,525,086 - 86,584,741 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1385,657,296 - 85,716,915 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0385,763,503 - 85,823,036 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0386,148,499 - 86,208,114 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dhx15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528551,095,691 - 51,143,802 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364774,797,312 - 4,846,094 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364774,797,345 - 4,844,804 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DHX15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl818,563,807 - 18,620,909 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1818,563,808 - 18,620,892 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2818,853,666 - 18,911,218 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DHX15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12725,775,156 - 25,832,309 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2725,775,160 - 25,831,860 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604772,254,160 - 72,352,253 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dhx15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247557,728,027 - 7,783,784 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247557,729,985 - 7,780,263 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Dhx15
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11153,946,497 - 53,984,134 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Dhx15
61 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:67
Count of miRNA genes:48
Interacting mature miRNAs:60
Transcripts:ENSRNOT00000005126
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143802371083023710Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1459848686104848686Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143900944484009444Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143123808072970315Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143067446985041098Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1433424686102238540Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143802371083023710Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1462398852107398852Rat
7387267Uae42Urinary albumin excretion QTL 420.61urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)142252151767521517Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1460854936105854936Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1411334716100078267Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141889519263895192Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1459848686104848686Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144261625899224555Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143802371083023710Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143941117087582095Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143802371083023710Rat

Markers in Region
DHX15  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21458,824,542 - 58,824,717 (+)MAPPERmRatBN7.2
Rnor_6.01461,174,340 - 61,174,514NCBIRnor6.0
Rnor_5.01461,286,365 - 61,286,539UniSTSRnor5.0
RGSC_v3.41463,600,660 - 63,600,834UniSTSRGSC3.4
Celera1457,920,743 - 57,920,917UniSTS
Cytogenetic Map14q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000005126   ⟹   ENSRNOP00000005126
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1463,000,319 - 63,037,828 (+)Ensembl
mRatBN7.2 Ensembl1458,787,139 - 58,825,078 (+)Ensembl
Rnor_6.0 Ensembl1461,136,746 - 61,174,880 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000086889
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1461,650,937 - 61,668,509 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000087589
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1461,650,937 - 61,668,509 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000103809   ⟹   ENSRNOP00000081583
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1462,999,877 - 63,029,241 (+)Ensembl
mRatBN7.2 Ensembl1458,787,127 - 58,825,088 (+)Ensembl
RefSeq Acc Id: NM_001191597   ⟹   NP_001178526
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81462,999,898 - 63,037,829 (+)NCBI
mRatBN7.21458,787,151 - 58,825,083 (+)NCBI
Rnor_6.01461,136,746 - 61,174,880 (+)NCBI
Rnor_5.01461,248,770 - 61,286,905 (+)NCBI
Celera1457,883,422 - 57,921,283 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063272935   ⟹   XP_063129005
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81462,999,886 - 63,034,014 (+)NCBI
RefSeq Acc Id: XM_063272936   ⟹   XP_063129006
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81462,999,886 - 63,032,848 (+)NCBI
RefSeq Acc Id: XM_063272937   ⟹   XP_063129007
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81462,999,886 - 63,030,697 (+)NCBI
RefSeq Acc Id: XR_005492917
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81462,999,886 - 63,034,016 (+)NCBI
mRatBN7.21458,787,147 - 58,825,083 (+)NCBI
RefSeq Acc Id: XR_005492918
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81462,999,886 - 63,033,258 (+)NCBI
mRatBN7.21458,787,147 - 58,820,505 (+)NCBI
RefSeq Acc Id: NP_001178526   ⟸   NM_001191597
- UniProtKB: D3ZD97 (UniProtKB/TrEMBL),   A6IJI2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000005126   ⟸   ENSRNOT00000005126
Ensembl Acc Id: ENSRNOP00000081583   ⟸   ENSRNOT00000103809
RefSeq Acc Id: XP_063129005   ⟸   XM_063272935
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZT94 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129006   ⟸   XM_063272936
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZT94 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129007   ⟸   XM_063272937
- Peptide Label: isoform X3
- UniProtKB: A0A8I5ZT94 (UniProtKB/TrEMBL)
Protein Domains
Helicase ATP-binding   Helicase C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZD97-F1-model_v2 AlphaFold D3ZD97 1-795 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699338
Promoter ID:EPDNEW_R9863
Type:multiple initiation site
Name:Dhx15_1
Description:DEAH-box helicase 15
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01461,136,755 - 61,136,815EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308072 AgrOrtholog
BioCyc Gene G2FUF-15585 BioCyc
Ensembl Genes ENSRNOG00000003844 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000055850 Ensembl
Ensembl Transcript ENSRNOT00000005126 ENTREZGENE
  ENSRNOT00000005126.8 UniProtKB/TrEMBL
  ENSRNOT00000103809 ENTREZGENE
  ENSRNOT00000103809.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.1080 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
InterPro DEAD-like_N UniProtKB/TrEMBL
  DHX15_DEXHc UniProtKB/TrEMBL
  DNA/RNA_helicase_C UniProtKB/TrEMBL
  DNA/RNA_helicase_DEAD/DEAH_N UniProtKB/TrEMBL
  DNA/RNA_helicase_DEAH_CS UniProtKB/TrEMBL
  DUF1605 UniProtKB/TrEMBL
  HA2_WH UniProtKB/TrEMBL
  Helicase-assoc_dom UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report rno:289693 UniProtKB/TrEMBL
NCBI Gene 289693 ENTREZGENE
PANTHER ATP-DEPENDENT RNA HELICASE UniProtKB/TrEMBL
  PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX15 UniProtKB/TrEMBL
Pfam DEAD UniProtKB/TrEMBL
  DUF1605 UniProtKB/TrEMBL
  HA2 UniProtKB/TrEMBL
  HA2_C UniProtKB/TrEMBL
  Helicase_C UniProtKB/TrEMBL
PhenoGen Dhx15 PhenoGen
PROSITE DEAH_ATP_HELICASE UniProtKB/TrEMBL
  HELICASE_ATP_BIND_1 UniProtKB/TrEMBL
  HELICASE_CTER UniProtKB/TrEMBL
RatGTEx ENSRNOG00000003844 RatGTEx
  ENSRNOG00000055850 RatGTEx
SMART DEXDc UniProtKB/TrEMBL
  HA2 UniProtKB/TrEMBL
  HELICc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8I5ZT94 ENTREZGENE, UniProtKB/TrEMBL
  A6IJI2 ENTREZGENE, UniProtKB/TrEMBL
  D3ZD97 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Dhx15  DEAH-box helicase 15  LOC100910750  putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like  Data merged from RGD:6497185 737654 PROVISIONAL
2016-01-13 Dhx15  DEAH-box helicase 15  Dhx15  DEAH (Asp-Glu-Ala-His) box helicase 15  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-05-22 Dhx15  DEAH (Asp-Glu-Ala-His) box helicase 15  Dhx15  DEAH (Asp-Glu-Ala-His) box polypeptide 15  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-07-05 LOC100910750  putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 Dhx15  DEAH (Asp-Glu-Ala-His) box polypeptide 15   Dhx15_predicted  DEAH (Asp-Glu-Ala-His) box polypeptide 15 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Dhx15_predicted  DEAH (Asp-Glu-Ala-His) box polypeptide 15 (predicted)      Symbol and Name status set to approved 70820 APPROVED