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Gene: Serpinb11 (serpin family B member 11) Rattus norvegicus

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Symbol:

Serpinb11

Name:

serpin family B member 11

RGD ID:

1306497

Description:

Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be active in extracellular space. Orthologous to human SERPINB11 (serpin family B member 11); INTERACTS WITH 17alpha-ethynylestradiol; alachlor; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC304689; serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11; serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 11; serpin B11; serpin peptidase inhibitor, clade B (ovalbumin), member 11; serpin peptidase inhibitor, clade B, member 11

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SERPINB11 (serpin family B member 11)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, Panther, PhylomeDB
Mus musculus (house mouse):	Serpinb11 (serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Serpinb11 (serpin family B member 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SERPINB11 (serpin family B member 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SERPINB11 (serpin family B member 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Serpinb11 (serpin family B member 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SERPINB11 (serpin family B member 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SERPINB11 (serpin family B member 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Serpinb11 (serpin family B member 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RNF10 (ring finger protein 10)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	SERPINB11 (serpin family B member 11)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Serpinb11 (serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn27A	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	srp-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	srp-3	Alliance	DIOPT (Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	srp-6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn28B	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	srp-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	srp-7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	srp-7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn28Da	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn28Da	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|PhylomeDB)
Caenorhabditis elegans (roundworm):	srp-8	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn28Db	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	Spn28F	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn38F	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn42Dc	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn42Dd	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn43Aa	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn47C	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn53F	Alliance	DIOPT (Ensembl Compara\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn55B	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn55B	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn88Ea	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn88Eb	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	nec	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Spn31A	Alliance	DIOPT (Ensembl Compara\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	serpinb11	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	serpinb11	Alliance	DIOPT (Ensembl Compara\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	23,819,416 - 23,859,240 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	23,819,429 - 23,859,240 (+)	Ensembl				GRCr8
mRatBN7.2	13	23,304,775 - 23,344,604 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	23,304,456 - 23,344,604 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	23,689,099 - 23,707,532 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	24,973,563 - 24,991,996 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	23,659,283 - 23,677,716 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	27,217,385 - 27,257,181 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	27,238,767 - 27,257,181 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	32,366,612 - 32,406,429 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	13,391,087 - 13,409,501 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	23,171,500 - 23,189,504 (+)	NCBI		Celera
RGSC_v3.1	13	13,391,878 - 13,409,012 (+)	NCBI
Cytogenetic Map	13	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-sulfonyldiphenol (ISO)

alachlor (EXP)

benzo[a]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium dichloride (EXP)

CGP 52608 (ISO)

epoxiconazole (ISO)

fenvalerate (EXP)

fulvestrant (ISO)

genistein (ISO)

N,N-diethyl-m-toluamide (EXP)

oxaliplatin (EXP)

permethrin (EXP)

potassium dichromate (ISO)

sodium arsenite (ISO)

testosterone (EXP)

titanium dioxide (ISO)

topotecan (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

extracellular space (IBA,IEA)

Molecular Function

peptidase inhibitor activity (IEA)

serine-type endopeptidase inhibitor activity (IBA,IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Serpinb11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	23,819,416 - 23,859,240 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	23,819,429 - 23,859,240 (+)	Ensembl				GRCr8
mRatBN7.2	13	23,304,775 - 23,344,604 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	23,304,456 - 23,344,604 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	23,689,099 - 23,707,532 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	24,973,563 - 24,991,996 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	23,659,283 - 23,677,716 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	27,217,385 - 27,257,181 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	27,238,767 - 27,257,181 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	32,366,612 - 32,406,429 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	13,391,087 - 13,409,501 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	23,171,500 - 23,189,504 (+)	NCBI		Celera
RGSC_v3.1	13	13,391,878 - 13,409,012 (+)	NCBI
Cytogenetic Map	13	p11	NCBI

SERPINB11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	63,702,304 - 63,723,893 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	63,647,579 - 63,726,432 (+)	Ensembl			hg38	GRCh38
GRCh37	18	61,370,194 - 61,391,127 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	59,521,174 - 59,542,103 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	18	59,528,407 - 59,541,613	NCBI
Celera	18	58,090,689 - 58,111,621 (+)	NCBI		Celera
Cytogenetic Map	18	q21.33	NCBI
HuRef	18	58,071,139 - 58,092,525 (+)	NCBI		HuRef
CHM1_1	18	61,366,368 - 61,387,300 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	18	63,908,033 - 63,928,969 (+)	NCBI		T2T-CHM13v2.0

Serpinb11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	107,290,044 - 107,308,205 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	107,288,928 - 107,308,205 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	107,362,314 - 107,380,475 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	107,361,198 - 107,380,475 (+)	Ensembl			mm10	GRCm38
MGSCv37	1	109,258,891 - 109,277,052 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	109,189,861 - 109,208,022 (+)	NCBI		MGSCv36	mm8
Celera	1	110,200,129 - 110,218,288 (+)	NCBI		Celera
Cytogenetic Map	1	E2.1	NCBI
cM Map	1	50.34	NCBI

Serpinb11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	47,564,492 - 47,585,054 (+)	Ensembl
ChiLan1.0	NW_004955402	47,564,631 - 47,585,486 (+)	NCBI	ChiLan1.0	ChiLan1.0

SERPINB11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	81,220,828 - 81,234,481 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	66,905,553 - 66,927,092 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	57,061,477 - 57,083,031 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	60,372,603 - 60,394,132 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	60,373,142 - 60,394,132 (+)	Ensembl			panPan2	panpan1.1

SERPINB11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	13,395,127 - 13,486,974 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	13,410,079 - 13,487,008 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	14,355,859 - 14,448,315 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	13,250,249 - 13,342,424 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	13,265,636 - 13,323,647 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	13,288,667 - 13,380,907 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	13,218,246 - 13,310,174 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	13,467,187 - 13,559,020 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Serpinb11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	26,692,531 - 26,711,335 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936497	1,930,201 - 1,950,494 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936497	1,931,500 - 1,950,256 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SERPINB11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	158,015,718 - 158,030,763 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	158,015,714 - 158,030,833 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	175,357,960 - 175,373,471 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SERPINB11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	16,075,310 - 16,096,437 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	16,075,796 - 16,088,987 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666060	9,594,695 - 9,615,769 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Serpinb11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624792	9,679,211 - 9,712,970 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624792	9,679,310 - 9,712,474 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Serpinb11
287 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	274
Count of miRNA genes:	175
Interacting mature miRNAs:	202
Transcripts:	ENSRNOT00000003495
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2317027	Aia22	Adjuvant induced arthritis QTL 22	2.29		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	13	1	34785618	Rat
2302275	Gluco37	Glucose level QTL 37	3.8		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	13	12448421	48744906	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	21120177	109350286	Rat
9589141	Insul28	Insulin level QTL 28	10.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	13	11866254	56866254	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	11081740	103588154	Rat
2317034	Aia9	Adjuvant induced arthritis QTL 9	4.62		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	12285517	34884386	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
12879471	Bp398	Blood pressure QTL 398			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	3088755	48088755	Rat
1300163	Cardf1	Cardiac cell morphology QTL 1	4.18		aorta morphology trait (VT:0000272)	artery lesion measurement (CMO:0000975)	13	12448421	47969993	Rat
631672	Iddm12	Insulin dependent diabetes mellitus QTL 12	2.2	0.0032	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	13	6002008	37088115	Rat
2317040	Aia21	Adjuvant induced arthritis QTL 21	2.75		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	12384320	57384320	Rat
631645	Bp121	Blood pressure QTL 121	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	17468282	62468282	Rat
2303030	Bp327	Blood pressure QTL 327			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	1	43736554	Rat
2317046	Aia8	Adjuvant induced arthritis QTL 8	3.9700000286102295		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	12384320	57384320	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	7421791	87286911	Rat
2317044	Aia23	Adjuvant induced arthritis QTL 23	2.3		joint integrity trait (VT:0010548)	ankle joint diameter (CMO:0002148)	13	12285517	34884386	Rat
61339	Bp24	Blood pressure QTL 24		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	6002008	47359539	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	103588154	Rat
9589164	Gluco66	Glucose level QTL 66	6.67	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	13	17711336	62711336	Rat
738036	Lnnr4	Liver neoplastic nodule remodeling QTL 4	3.64		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	1	34785618	Rat
7411662	Foco29	Food consumption QTL 29	20.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	13	11866254	56866254	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
4	3	26	98	58	69	39	80	39	6	196	116	6	84	34	69	30

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001443610	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001443611	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598780	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC103453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000003495 ⟹ ENSRNOP00000003495

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	23,840,826 - 23,859,240 (+)	Ensembl
mRatBN7.2 Ensembl	13	23,326,190 - 23,344,604 (+)	Ensembl
Rnor_6.0 Ensembl	13	27,238,767 - 27,257,181 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116267 ⟹ ENSRNOP00000084176

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	23,819,429 - 23,859,218 (+)	Ensembl
mRatBN7.2 Ensembl	13	23,304,456 - 23,344,604 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000124742 ⟹ ENSRNOP00000110238

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	23,823,664 - 23,859,240 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000170148 ⟹ ENSRNOP00000112393

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	23,823,650 - 23,859,240 (+)	Ensembl

RefSeq Acc Id:

NM_001107167 ⟹ NP_001100637

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	23,840,826 - 23,859,240 (+)	NCBI
mRatBN7.2	13	23,326,190 - 23,344,604 (+)	NCBI
Rnor_6.0	13	27,238,767 - 27,257,181 (+)	NCBI
Rnor_5.0	13	32,366,612 - 32,406,429 (+)	NCBI
RGSC_v3.4	13	13,391,087 - 13,409,501 (+)	RGD
Celera	13	23,171,500 - 23,189,504 (+)	RGD

Sequence:

show sequence

AGATCAGCTATAACAGGATAAGTGCCTTCCAAACCATCAAAGACTCCAGCTGGTGTTGGATCAT
GTGAGGAGAAAGTGCTGTCTGAGCAGAGAGACATTGGACGGTGAAGAGCTGAATCATAATAGCA
CAGTGGAAAGGGAGGAGCAAAAAGTGAAGGCTTATATTTCCTTTGGAGGGACACAGCTCCAGTC
TAACCTGCTAAACTGTTCCCAACGCCATCAGAAAGCAACAAAGGCATTGTTTGGGAGAAGAATG
GATTCCATCACCACAGCAAATACTGAATTTTGCCTTGATGTGTTCAAAGAGCTGAGCAGTAGCA
ACGTGGGAGAAAACATCTTCTTTTCTCCGCTCACTACGTTTTATGCTCTAAGCATGCTTCTCCT
GGGTGCCAGGGGAAAGAGTGCTGAGCAAATGGAAAAGGTGCTCCACTATGACAACTTTTCAGGA
TTCTTAAAAGCGAAGATAAAAAATTCTTCTGAGTGCAGCCAAGGTGGAAGGATGCATCCTGAGT
TCAGAGCCTTGGTATCCCACATTAATCAACAGAATTCCCTCAGCATTGCTAACAGAATTTATGG
GACAAAGGCAATAGAATTCCACAAGCAATACATAAGATGTTGTGAGAAACTTTACCAAGCCAAG
CTACAAACTGTTGATTTTGAACTATCCGCAGAAGAGACAAGGAAGAGTATTAATGCTTGGGTTG
AAAATAAAACTCATGGAAAAATCACAAACTTATTTGATAAGGGTACAATTGACCCATCTTCAGT
CATGGTCCTAGTGAGTGCCATATATTTCAAGGGACAATGGCAAAATAAATTCCAGAAGACAGAG
ACAGTAAAAGCCCCCTTTCACATAAGTGTGGGTAAAAGTGCAGTTGTGGACATGATGTATCAGA
CTGGAACATTTAAGCTGGCCTTCATAAAGGAGCCACAGATGCAAGTCCTTGAGCTTCCCTATGC
CAACAACAAACTAAGAATGATCATCCTGCTACCTGTAGGCACAGCCAGTGTAAACCAGATAGAA
AAGCACCTGAATGCGAAGATGCTTCGAGAGTGGACCAGCCCTTCTAACATGGTGGAAAGAGTGG
TGGATGTTCACATCCCTAAATTCAGTCTTTCAGTAAAATATGACTTGAACACCCTATTGAAATC
CTTAGGCATGAGTGACATCTTCAACGTGGCCAAAGCTGATCTTTCTGGAATGTCACCAGACAAG
GGCCTATATTTATCCAAGGTCGTTCACAAGTCATATGTGGATGTCAATGAAGAAGGAACAGAGG
CCGCTGCAGCCACTGGGGAGACTATTTCTGTGAAGCGACTCCCTGTCACAGTTCAGTTCACAGC
CAATTGTCCTTTCCTGTTCTTTATCTGGGATGAGTTTTACAATATTTTATTTGCTGGAAAGTTT
GCTTCTCCATAGACAGAGGGCAGTGTGGAGACCTCAGAGATAGTGAAGACATACAGGGAGGAAA
GGGTTGAGCATTTGTGTCTCAGCCTTTATTCATCTGCAAAGCAGGTCTACCATCACCTCAGACT
GATCCTGTGAGCTAGTGAGTCTAAGATTATAGAAGCCATGTAAAAAGATCCATTTATACCAGTG
CTTTTCTGGATTTCATATCTTTGAGACCTCATCTGAGGACAGTGACATGATTGAGTTAGCAGAG
AAGTTTATAAAGGGCTAGATGTATTTGGTTTTTCTATGAGTGAGATTGTGAACAAGTAATTATT
ACAAATCAGATCAAGGTTTTCTACTTTAGCTTGCCTTTTAAATATAAATTTCCTACATGCCTAT
GGATTTCAGCTCAAAATTCTACATGGATAATAATAAATGGACATGATGCTTTGAACTTTTTGAA
GATAAGAATAAACTCTATCAGTTAATTAACTGAAGGGAGGAGATTGCTTATTC

hide sequence

RefSeq Acc Id:

XM_006249632 ⟹ XP_006249694

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	23,841,777 - 23,859,216 (+)	NCBI
mRatBN7.2	13	23,326,447 - 23,344,580 (+)	NCBI
Rnor_6.0	13	27,239,538 - 27,257,157 (+)	NCBI
Rnor_5.0	13	32,366,612 - 32,406,429 (+)	NCBI

Sequence:

show sequence

CATGACTTTGTGTTGTTTATAATGACTCTGGCAACCCCTGGAAAGTTGACATGGGTTTTATCAA
TGGGATGTATGCACGCTATTCTCTTTGGAAAGATAGCTGAACTTCCTTCAGTGGAAGTTAAGTT
TGTTGATGATTATTTGTTTGTAAAGCAGAATAAGAGTAGTAAGTACAGTGTGATCCAAAAAGCA
CAGTTTATGTGGAATACTTCCAAAGCCACTATATGGTCTTCAGAAGGACTTCCTTCTTGGAGTT
GTACTTCCTGCCCAGCAGGTGAAGAGCTGAATCATAATAGCACAGTGGAAAGGGAGGAGCAAAA
AGTGAAGGCTTATATTTCCTTTGGAGGGACACAGCTCCAGTCTAACCTGCTAAACTGTTCCCAA
CGCCATCAGAAAGCAACAAAGGCATTGTTTGGGAGAAGAATGGATTCCATCACCACAGCAAATA
CTGAATTTTGCCTTGATGTGTTCAAAGAGCTGAGCAGTAGCAACGTGGGAGAAAACATCTTCTT
TTCTCCGCTCACTACGTTTTATGCTCTAAGCATGCTTCTCCTGGGTGCCAGGGGAAAGAGTGCT
GAGCAAATGGAAAAGGTGCTCCACTATGACAACTTTTCAGGATTCTTAAAAGCGAAGATAAAAA
ATTCTTCTGAGTGCAGCCAAGGTGGAAGGATGCATCCTGAGTTCAGAGCCTTGGTATCCCACAT
TAATCAACAGAATTCCCTCAGCATTGCTAACAGAATTTATGGGACAAAGGCAATAGAATTCCAC
AAGCAATACATAAGATGTTGTGAGAAACTTTACCAAGCCAAGCTACAAACTGTTGATTTTGAAC
TATCCGCAGAAGAGACAAGGAAGAGTATTAATGCTTGGGTTGAAAATAAAACTCATGGAAAAAT
CACAAACTTATTTGATAAGGGTACAATTGACCCATCTTCAGTCATGGTCCTAGTGAGTGCCATA
TATTTCAAGGGACAATGGCAAAATAAATTCCAGAAGACAGAGACAGTAAAAGCCCCCTTTCACA
TAAGTGTGGGTAAAAGTGCAGTTGTGGACATGATGTATCAGACTGGAACATTTAAGCTGGCCTT
CATAAAGGAGCCACAGATGCAAGTCCTTGAGCTTCCCTATGCCAACAACAAACTAAGAATGATC
ATCCTGCTACCTGTAGGCACAGCCAGTGTAAACCAGATAGAAAAGCACCTGAATGCGAAGATGC
TTCGAGAGTGGACCAGCCCTTCTAACATGGTGGAAAGAGTGGTGGATGTTCACATCCCTAAATT
CAGTCTTTCAGTAAAATATGACTTGAACACCCTATTGAAATCCTTAGGCATGAGTGACATCTTC
AACGTGGCCAAAGCTGATCTTTCTGGAATGTCACCAGACAAGGGCCTATATTTATCCAAGGTCG
TTCACAAGTCATATGTGGATGTCAATGAAGAAGGAACAGAGGCCGCTGCAGCCACTGGGGAGAC
TATTTCTGTGAAGCGACTCCCTGTCACAGTTCAGTTCACAGCCAATTGTCCTTTCCTGTTCTTT
ATCTGGGATGAGTTTTACAATATTTTATTTGCTGGAAAGTTTGCTTCTCCATAGACAGAGGGCA
GTGTGGAGACCTCAGAGATAGTGAAGACATACAGGGAGGAAAGGGTTGAGCATTTGTGTCTCAG
CCTTTATTCATCTGCAAAGCAGGTCTACCATCACCTCAGACTGATCCTGTGAGCTAGTGAGTCT
AAGATTATAGAAGCCATGTAAAAAGATCCATTTATACCAGTGCTTTTCTGGATTTCATATCTTT
GAGACCTCATCTGAGGACAGTGACATGATTGAGTTAGCAGAGAAGTTTATAAAGGGCTAGATGT
ATTTGGTTTTTCTATGAGTGAGATTGTGAACAAGTAATTATTACAAATCAGATCAAGGTTTTCT
ACTTTAGCTTGCCTTTTAAATATAAATTTCCTACATGCCTATGGATTTCAGCTCAAAATTCTAC
ATGGATAATAATAAATGGACATGATGCTTTGAACTTTTTGAAGATAAGAATAAACTCTATCAGT
TAATTAA

hide sequence

RefSeq Acc Id:

XM_006249633 ⟹ XP_006249695

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	23,819,416 - 23,859,216 (+)	NCBI
mRatBN7.2	13	23,304,775 - 23,344,580 (+)	NCBI
Rnor_6.0	13	27,217,385 - 27,257,157 (+)	NCBI
Rnor_5.0	13	32,366,612 - 32,406,429 (+)	NCBI

Sequence:

show sequence

TAAGACAACATGGAACCAAAAAGACCATGGGAAGTAACCCTGAGCAGAATGAAGAACACTAGAG
GGATTGCTGCTTTCAACTTTGAGGCATTGTTTGGGAGAAGAATGGATTCCATCACCACAGCAAA
TACTGAATTTTGCCTTGATGTGTTCAAAGAGCTGAGCAGTAGCAACGTGGGAGAAAACATCTTC
TTTTCTCCGCTCACTACGTTTTATGCTCTAAGCATGCTTCTCCTGGGTGCCAGGGGAAAGAGTG
CTGAGCAAATGGAAAAGGTGCTCCACTATGACAACTTTTCAGGATTCTTAAAAGCGAAGATAAA
AAATTCTTCTGAGTGCAGCCAAGGTGGAAGGATGCATCCTGAGTTCAGAGCCTTGGTATCCCAC
ATTAATCAACAGAATTCCCTCAGCATTGCTAACAGAATTTATGGGACAAAGGCAATAGAATTCC
ACAAGCAATACATAAGATGTTGTGAGAAACTTTACCAAGCCAAGCTACAAACTGTTGATTTTGA
ACTATCCGCAGAAGAGACAAGGAAGAGTATTAATGCTTGGGTTGAAAATAAAACTCATGGAAAA
ATCACAAACTTATTTGATAAGGGTACAATTGACCCATCTTCAGTCATGGTCCTAGTGAGTGCCA
TATATTTCAAGGGACAATGGCAAAATAAATTCCAGAAGACAGAGACAGTAAAAGCCCCCTTTCA
CATAAGTGTGGGTAAAAGTGCAGTTGTGGACATGATGTATCAGACTGGAACATTTAAGCTGGCC
TTCATAAAGGAGCCACAGATGCAAGTCCTTGAGCTTCCCTATGCCAACAACAAACTAAGAATGA
TCATCCTGCTACCTGTAGGCACAGCCAGTGTAAACCAGATAGAAAAGCACCTGAATGCGAAGAT
GCTTCGAGAGTGGACCAGCCCTTCTAACATGGTGGAAAGAGTGGTGGATGTTCACATCCCTAAA
TTCAGTCTTTCAGTAAAATATGACTTGAACACCCTATTGAAATCCTTAGGCATGAGTGACATCT
TCAACGTGGCCAAAGCTGATCTTTCTGGAATGTCACCAGACAAGGGCCTATATTTATCCAAGGT
CGTTCACAAGTCATATGTGGATGTCAATGAAGAAGGAACAGAGGCCGCTGCAGCCACTGGGGAG
ACTATTTCTGTGAAGCGACTCCCTGTCACAGTTCAGTTCACAGCCAATTGTCCTTTCCTGTTCT
TTATCTGGGATGAGTTTTACAATATTTTATTTGCTGGAAAGTTTGCTTCTCCATAGACAGAGGG
CAGTGTGGAGACCTCAGAGATAGTGAAGACATACAGGGAGGAAAGGGTTGAGCATTTGTGTCTC
AGCCTTTATTCATCTGCAAAGCAGGTCTACCATCACCTCAGACTGATCCTGTGAGCTAGTGAGT
CTAAGATTATAGAAGCCATGTAAAAAGATCCATTTATACCAGTGCTTTTCTGGATTTCATATCT
TTGAGACCTCATCTGAGGACAGTGACATGATTGAGTTAGCAGAGAAGTTTATAAAGGGCTAGAT
GTATTTGGTTTTTCTATGAGTGAGATTGTGAACAAGTAATTATTACAAATCAGATCAAGGTTTT
CTACTTTAGCTTGCCTTTTAAATATAAATTTCCTACATGCCTATGGATTTCAGCTCAAAATTCT
ACATGGATAATAATAAATGGACATGATGCTTTGAACTTTTTGAAGATAAGAATAAACTCTATCA
GTTAATTAA

hide sequence

RefSeq Acc Id:

XM_008769453 ⟹ XP_008767675

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	23,851,503 - 23,859,216 (+)	NCBI
mRatBN7.2	13	23,337,078 - 23,344,580 (+)	NCBI
Rnor_6.0	13	27,249,643 - 27,257,157 (+)	NCBI

Sequence:

show sequence

GAAAATTCCACTTGATAAAGGTCACAGCCATAATCATTAAGGTTGAGATTTGATTCTTAACTAA
ACTCCAGTCTCCTTCCTGTAATGGCTGACATGATGCTGTTGTTGTCCTTGGACCATCTCTGTTT
GACCGGGGATTACTGAAGTGTCAAGAAGAAGCCTCAAATTCCTGTTTTCTTTCCCACGTTTGCC
ACTTAAGCTATCTCGGACATCATACATCTCTGATAAAATTTTTGCATCTGAGCAATACATAAGA
TGTTGTGAGAAACTTTACCAAGCCAAGCTACAAACTGTTGATTTTGAACTATCCGCAGAAGAGA
CAAGGAAGAGTATTAATGCTTGGGTTGAAAATAAAACTCATGGAAAAATCACAAACTTATTTGA
TAAGGGTACAATTGACCCATCTTCAGTCATGGTCCTAGTGAGTGCCATATATTTCAAGGGACAA
TGGCAAAATAAATTCCAGAAGACAGAGACAGTAAAAGCCCCCTTTCACATAAGTGTGGGTAAAA
GTGCAGTTGTGGACATGATGTATCAGACTGGAACATTTAAGCTGGCCTTCATAAAGGAGCCACA
GATGCAAGTCCTTGAGCTTCCCTATGCCAACAACAAACTAAGAATGATCATCCTGCTACCTGTA
GGCACAGCCAGTGTAAACCAGATAGAAAAGCACCTGAATGCGAAGATGCTTCGAGAGTGGACCA
GCCCTTCTAACATGGTGGAAAGAGTGGTGGATGTTCACATCCCTAAATTCAGTCTTTCAGTAAA
ATATGACTTGAACACCCTATTGAAATCCTTAGGCATGAGTGACATCTTCAACGTGGCCAAAGCT
GATCTTTCTGGAATGTCACCAGACAAGGGCCTATATTTATCCAAGGTCGTTCACAAGTCATATG
TGGATGTCAATGAAGAAGGAACAGAGGCCGCTGCAGCCACTGGGGAGACTATTTCTGTGAAGCG
ACTCCCTGTCACAGTTCAGTTCACAGCCAATTGTCCTTTCCTGTTCTTTATCTGGGATGAGTTT
TACAATATTTTATTTGCTGGAAAGTTTGCTTCTCCATAGACAGAGGGCAGTGTGGAGACCTCAG
AGATAGTGAAGACATACAGGGAGGAAAGGGTTGAGCATTTGTGTCTCAGCCTTTATTCATCTGC
AAAGCAGGTCTACCATCACCTCAGACTGATCCTGTGAGCTAGTGAGTCTAAGATTATAGAAGCC
ATGTAAAAAGATCCATTTATACCAGTGCTTTTCTGGATTTCATATCTTTGAGACCTCATCTGAG
GACAGTGACATGATTGAGTTAGCAGAGAAGTTTATAAAGGGCTAGATGTATTTGGTTTTTCTAT
GAGTGAGATTGTGAACAAGTAATTATTACAAATCAGATCAAGGTTTTCTACTTTAGCTTGCCTT
TTAAATATAAATTTCCTACATGCCTATGGATTTCAGCTCAAAATTCTACATGGATAATAATAAA
TGGACATGATGCTTTGAACTTTTTGAAGATAAGAATAAACTCTATCAGTTAATTAA

hide sequence

RefSeq Acc Id:

XM_017598781 ⟹ XP_017454270

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	23,851,333 - 23,859,216 (+)	NCBI
mRatBN7.2	13	23,336,457 - 23,344,580 (+)	NCBI
Rnor_6.0	13	27,249,028 - 27,257,157 (+)	NCBI

Sequence:

show sequence

GCAACCTCTGAACTTTATATAGAAGATCAAGGGAGAGTGAGCAGAGCTCATGGTATTCTTACAA
TGATGAATTCGGGCTTAGAGTTTCCAAGCCATGGCATTATCAAAACTCTCACTTAGAGTTGTTC
AATAGCACATGAAACTTTCTTTCGCAGCCAAATCCCTAAAGCTGTGGTTAAGAACTAAGGTCAG
AGATAAGCACAACAGGAAGGCATTTGTAAGAGTTGCCCTTTGAGGATAAGGAGAAAAGTGAACT
ACATTTCTGATATTTAGCAAAGGTCCTTGATGTTGACCATTAAGAGGTAGTTGAAAGCACATTC
AACTGTGAGCCAAGAGAGGAGAGGTTTCCTTCTACTTACACATATGACTTTGGCAATACATAAG
ATGTTGTGAGAAACTTTACCAAGCCAAGCTACAAACTGTTGATTTTGAACTATCCGCAGAAGAG
ACAAGGAAGAGTATTAATGCTTGGGTTGAAAATAAAACTCATGGAAAAATCACAAACTTATTTG
ATAAGGGTACAATTGACCCATCTTCAGTCATGGTCCTAGTGAGTGCCATATATTTCAAGGGACA
ATGGCAAAATAAATTCCAGAAGACAGAGACAGTAAAAGCCCCCTTTCACATAAGTGTGGGTAAA
AGTGCAGTTGTGGACATGATGTATCAGACTGGAACATTTAAGCTGGCCTTCATAAAGGAGCCAC
AGATGCAAGTCCTTGAGCTTCCCTATGCCAACAACAAACTAAGAATGATCATCCTGCTACCTGT
AGGCACAGCCAGTGTAAACCAGATAGAAAAGCACCTGAATGCGAAGATGCTTCGAGAGTGGACC
AGCCCTTCTAACATGGTGGAAAGAGTGGTGGATGTTCACATCCCTAAATTCAGTCTTTCAGTAA
AATATGACTTGAACACCCTATTGAAATCCTTAGGCATGAGTGACATCTTCAACGTGGCCAAAGC
TGATCTTTCTGGAATGTCACCAGACAAGGGCCTATATTTATCCAAGGTCGTTCACAAGTCATAT
GTGGATGTCAATGAAGAAGGAACAGAGGCCGCTGCAGCCACTGGGGAGACTATTTCTGTGAAGC
GACTCCCTGTCACAGTTCAGTTCACAGCCAATTGTCCTTTCCTGTTCTTTATCTGGGATGAGTT
TTACAATATTTTATTTGCTGGAAAGTTTGCTTCTCCATAGACAGAGGGCAGTGTGGAGACCTCA
GAGATAGTGAAGACATACAGGGAGGAAAGGGTTGAGCATTTGTGTCTCAGCCTTTATTCATCTG
CAAAGCAGGTCTACCATCACCTCAGACTGATCCTGTGAGCTAGTGAGTCTAAGATTATAGAAGC
CATGTAAAAAGATCCATTTATACCAGTGCTTTTCTGGATTTCATATCTTTGAGACCTCATCTGA
GGACAGTGACATGATTGAGTTAGCAGAGAAGTTTATAAAGGGCTAGATGTATTTGGTTTTTCTA
TGAGTGAGATTGTGAACAAGTAATTATTACAAATCAGATCAAGGTTTTCTACTTTAGCTTGCCT
TTTAAATATAAATTTCCTACATGCCTATGGATTTCAGCTCAAAATTCTACATGGATAATAATAA
ATGGACATGATGCTTTGAACTTTTTGAAGATAAGAATAAACTCTATCAGTTAATTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001100637	(Get FASTA)	NCBI Sequence Viewer
	NP_001430539	(Get FASTA)	NCBI Sequence Viewer
	NP_001430540	(Get FASTA)	NCBI Sequence Viewer
	XP_006249694	(Get FASTA)	NCBI Sequence Viewer
	XP_006249695	(Get FASTA)	NCBI Sequence Viewer
	XP_008767675	(Get FASTA)	NCBI Sequence Viewer
	XP_017454270	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL91755	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000003495
	ENSRNOP00000003495.4
	ENSRNOP00000084176
	ENSRNOP00000084176.1
	ENSRNOP00000110238.1
	ENSRNOP00000112393.1

RefSeq Acc Id:

NP_001100637 ⟸ NM_001107167

- UniProtKB:

D3ZJI7 (UniProtKB/TrEMBL), A6JSV7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDSITTANTEFCLDVFKELSSSNVGENIFFSPLTTFYALSMLLLGARGKSAEQMEKVLHYDNFS
GFLKAKIKNSSECSQGGRMHPEFRALVSHINQQNSLSIANRIYGTKAIEFHKQYIRCCEKLYQA
KLQTVDFELSAEETRKSINAWVENKTHGKITNLFDKGTIDPSSVMVLVSAIYFKGQWQNKFQKT
ETVKAPFHISVGKSAVVDMMYQTGTFKLAFIKEPQMQVLELPYANNKLRMIILLPVGTASVNQI
EKHLNAKMLREWTSPSNMVERVVDVHIPKFSLSVKYDLNTLLKSLGMSDIFNVAKADLSGMSPD
KGLYLSKVVHKSYVDVNEEGTEAAAATGETISVKRLPVTVQFTANCPFLFFIWDEFYNILFAGK
FASP

hide sequence

RefSeq Acc Id:	XP_006249695 ⟸ XM_006249633
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZXG7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEPKRPWEVTLSRMKNTRGIAAFNFEALFGRRMDSITTANTEFCLDVFKELSSSNVGENIFFSP LTTFYALSMLLLGARGKSAEQMEKVLHYDNFSGFLKAKIKNSSECSQGGRMHPEFRALVSHINQ QNSLSIANRIYGTKAIEFHKQYIRCCEKLYQAKLQTVDFELSAEETRKSINAWVENKTHGKITN LFDKGTIDPSSVMVLVSAIYFKGQWQNKFQKTETVKAPFHISVGKSAVVDMMYQTGTFKLAFIK EPQMQVLELPYANNKLRMIILLPVGTASVNQIEKHLNAKMLREWTSPSNMVERVVDVHIPKFSL SVKYDLNTLLKSLGMSDIFNVAKADLSGMSPDKGLYLSKVVHKSYVDVNEEGTEAAAATGETIS VKRLPVTVQFTANCPFLFFIWDEFYNILFAGKFASP hide sequence

RefSeq Acc Id:

XP_006249694 ⟸ XM_006249632

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTLATPGKLTWVLSMGCMHAILFGKIAELPSVEVKFVDDYLFVKQNKSSKYSVIQKAQFMWNTS
KATIWSSEGLPSWSCTSCPAGEELNHNSTVEREEQKVKAYISFGGTQLQSNLLNCSQRHQKATK
ALFGRRMDSITTANTEFCLDVFKELSSSNVGENIFFSPLTTFYALSMLLLGARGKSAEQMEKVL
HYDNFSGFLKAKIKNSSECSQGGRMHPEFRALVSHINQQNSLSIANRIYGTKAIEFHKQYIRCC
EKLYQAKLQTVDFELSAEETRKSINAWVENKTHGKITNLFDKGTIDPSSVMVLVSAIYFKGQWQ
NKFQKTETVKAPFHISVGKSAVVDMMYQTGTFKLAFIKEPQMQVLELPYANNKLRMIILLPVGT
ASVNQIEKHLNAKMLREWTSPSNMVERVVDVHIPKFSLSVKYDLNTLLKSLGMSDIFNVAKADL
SGMSPDKGLYLSKVVHKSYVDVNEEGTEAAAATGETISVKRLPVTVQFTANCPFLFFIWDEFYN
ILFAGKFASP

hide sequence

RefSeq Acc Id:

XP_008767675 ⟸ XM_008769453

- Peptide Label:

isoform X3

- Sequence:

show sequence

MVLVSAIYFKGQWQNKFQKTETVKAPFHISVGKSAVVDMMYQTGTFKLAFIKEPQMQVLELPYA
NNKLRMIILLPVGTASVNQIEKHLNAKMLREWTSPSNMVERVVDVHIPKFSLSVKYDLNTLLKS
LGMSDIFNVAKADLSGMSPDKGLYLSKVVHKSYVDVNEEGTEAAAATGETISVKRLPVTVQFTA
NCPFLFFIWDEFYNILFAGKFASP

hide sequence

RefSeq Acc Id:

XP_017454270 ⟸ XM_017598781

- Peptide Label:

isoform X3

- Sequence:

show sequence

MVLVSAIYFKGQWQNKFQKTETVKAPFHISVGKSAVVDMMYQTGTFKLAFIKEPQMQVLELPYA
NNKLRMIILLPVGTASVNQIEKHLNAKMLREWTSPSNMVERVVDVHIPKFSLSVKYDLNTLLKS
LGMSDIFNVAKADLSGMSPDKGLYLSKVVHKSYVDVNEEGTEAAAATGETISVKRLPVTVQFTA
NCPFLFFIWDEFYNILFAGKFASP

hide sequence

Ensembl Acc Id:

ENSRNOP00000003495 ⟸ ENSRNOT00000003495

Ensembl Acc Id:

ENSRNOP00000084176 ⟸ ENSRNOT00000116267

Ensembl Acc Id:

ENSRNOP00000110238 ⟸ ENSRNOT00000124742

Ensembl Acc Id:

ENSRNOP00000112393 ⟸ ENSRNOT00000170148

Protein Domains

SERPIN

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZJI7-F1-model_v2	AlphaFold	D3ZJI7	1-388	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306497	AgrOrtholog
BioCyc Gene	G2FUF-18594	BioCyc
Ensembl Genes	ENSRNOG00000002583	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000003495	ENTREZGENE
	ENSRNOT00000003495.7	UniProtKB/TrEMBL
	ENSRNOT00000116267	ENTREZGENE
	ENSRNOT00000116267.2	UniProtKB/TrEMBL
	ENSRNOT00000124742.1	UniProtKB/TrEMBL
	ENSRNOT00000170148.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.39.10	UniProtKB/TrEMBL
	3.30.497.10	UniProtKB/TrEMBL
InterPro	Protease_inhib_I4_serpin	UniProtKB/TrEMBL
	Sepin_dom	UniProtKB/TrEMBL
	Serpin_sf	UniProtKB/TrEMBL
	Serpin_sf_1	UniProtKB/TrEMBL
	Serpin_sf_2	UniProtKB/TrEMBL
KEGG Report	rno:304689	UniProtKB/TrEMBL
NCBI Gene	304689	ENTREZGENE
PANTHER	Prot_inh_serpin	UniProtKB/TrEMBL
	SERPIN B11	UniProtKB/TrEMBL
Pfam	Serpin	UniProtKB/TrEMBL
PhenoGen	Serpinb11	PhenoGen
RatGTEx	ENSRNOG00000002583	RatGTEx
SMART	SERPIN	UniProtKB/TrEMBL
Superfamily-SCOP	Prot_inh_serpin	UniProtKB/TrEMBL
UniProt	A0A8I5ZXG7	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LVF2_RAT	UniProtKB/TrEMBL
	A0ABK0M0L8_RAT	UniProtKB/TrEMBL
	A6JSV7	ENTREZGENE, UniProtKB/TrEMBL
	D3ZJI7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-11-16	Serpinb11	serpin family B member 11	Serpinb11	serpin peptidase inhibitor, clade B (ovalbumin), member 11	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-10-16	Serpinb11	serpin peptidase inhibitor, clade B (ovalbumin), member 11	Serpinb11	serpin peptidase inhibitor, clade B, member 11	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-03-05	Serpinb11	serpin peptidase inhibitor, clade B, member 11	Serpinb11	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-02-23	Serpinb11	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	Serpinb11	serpin peptidase inhibitor, clade B (ovalbumin), member 11	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Serpinb11	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	Serpinb11_predicted	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Serpinb11_predicted	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11 (predicted)		serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 11 (predicted)	Name updated	1299863	APPROVED
2005-01-12	Serpinb11_predicted	serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 11 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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