Aia23 QTL Report (Rattus norvegicus)

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Keyword

General

QTL: Aia23 (Adjuvant induced arthritis QTL 23) Rattus norvegicus

Symbol:

Aia23

Name:

Adjuvant induced arthritis QTL 23

Trait:

Joint/bone inflammation

Subtrait:

adjuvant induced

Method:

joint diameter of the rear ankle was taken

LOD Score:

2.3

P Value:

Not Available

Variance:

6.5

Position

Map	Chr	Position	Strand	Source
RGSC Genome Assembly v5.0	13	19,518,130 - 42,226,993		RGD
RGSC Genome Assembly v3.4	13	1,084,268 - 33,188,609		RGD

Cross Type:

intercross

Strains Crossed:

F344/NCrl LEW/Crl

Model

Launch Genome Browser (GBrowse)

Annotation (Toggle Detail/Summary View)

Disease Annotations

Phenotype Annotations

References - curated

RGD Disease Portals

Region

Genes in Region (RGSC Genome Assembly v3.4)

The following Genes overlap with this region.

RGD ID	Symbol	Name	Chr	Start	Stop	Species
1587089	LOC679594	similar to polyubiquitin	13	1120887	1121195	Rat
1592077	LOC304725	similar to contactin associated protein-like 5 isoform 1	13	1192186	2293551	Rat
2318691	LOC100362193	eukaryotic translation initiation factor 4A-like	13	1879152	1880247	Rat
1585944	LOC679645	similar to prohibitin	13	3174432	3175216	Rat
1593260	Hspd1-ps8	heat shock protein 1, pseudogene 8	13	3553231	3554994	Rat
1583413	LOC682479	hypothetical protein LOC682479	13	4239167	4239763	Rat
1584833	LOC679708	similar to methionine adenosyltransferase II, beta	13	4377568	4378508	Rat
2320290	LOC100361375	rCG24061-like	13	4773782	4783415	Rat
1584807	LOC679734	similar to 40S ribosomal protein S4, Y isoform 2	13	4873031	4873787	Rat
1584791	LOC679751	hypothetical protein LOC679751	13	4985933	4988084	Rat
2318305	LOC100362382	CCDC28A protein-like	13	5481255	5487412	Rat
1561440	RGD1561440	similar to nemo like kinase	13	5490860	5492338	Rat
1594544	LOC301971	similar to kinesin family member 13A	13	5573281	5577591	Rat
1583673	LOC679815	similar to endosulfine alpha isoform 2	13	5972234	5972425	Rat
1583661	LOC679827	similar to Ran-specific GTPase-activating protein (Ran-binding protein 1) (RANBP1) (HpaII tiny fragments locus 9a protein)	13	6224544	6284566	Rat
1583598	LOC679892	similar to DnaJ (Hsp40) homolog, subfamily C, member 14	13	7097922	7101178	Rat
1594393	LOC498205	similar to DnaJ (Hsp40) homolog, subfamily C, member 14	13	7100072	7102595	Rat
1598145	LOC679925	similar to family with sequence similarity 51, member A1 homolog	13	7537523	7538228	Rat
1565194	Cntnap5b	contactin associated protein-like 5B	13	7714567	8649647	Rat
1598090	LOC679980	similar to protein phosphatase 1, regulatory (inhibitor) subunit 14B	13	9434495	9493582	Rat
2324323	LOC100362635	RIKEN cDNA 5730577I03-like	13	9990291	9990635	Rat
1596843	LOC680044	similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a)	13	10551049	10551421	Rat
1305438	Cdh20	cadherin 20	13	10970187	11038947	Rat
1305251	Rnf152	ring finger protein 152	13	11309564	11386370	Rat
1595441	LOC680183	similar to Ubiquitin-like protein FUBI	13	11634445	11634788	Rat
1311346	Pign	phosphatidylinositol glycan anchor biosynthesis, class N	13	11668749	11833940	Rat
1307235	RGD1307235	similar to RIKEN cDNA 2310035C23	13	11834138	11930253	Rat
1563614	Tnfrsf11a	tumor necrosis factor receptor superfamily, member 11a, NFKB activator	13	11958002	12014371	Rat
1594392	LOC498207	similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (38 kDa BFA-dependent ADP-ribosylation substrate) (BARS-38)	13	12023330	12024324	Rat
1310626	Zcchc2	zinc finger, CCHC domain containing 2	13	12148072	12196570	Rat
2324092	LOC100362766	hypothetical protein LOC100362766	13	12207397	12223590	Rat
621308	Phlpp1	PH domain and leucine rich repeat protein phosphatase 1	13	12315824	12565692	Rat
2199	Bcl2	B-cell CLL/lymphoma 2	13	12730736	12905108	Rat
1592999	LOC680330	hypothetical protein LOC680330	13	12906069	12906711	Rat
1307775	Kdsr	3-ketodihydrosphingosine reductase	13	12914967	12946853	Rat
1305969	Vps4b	vacuolar protein sorting 4 homolog B (S. cerevisiae)	13	12959843	12984933	Rat
69342	Serpinb5	serpin peptidase inhibitor, clade B (ovalbumin), member 5	13	13037587	13057785	Rat
1566382	Serpinb12	serpin peptidase inhibitor, clade B (ovalbumin), member 12	13	13106080	13137360	Rat
1304661	Serpinb13	serpin peptidase inhibitor, clade B (ovalbumin), member 13	13	13175746	13209693	Rat
1592941	LOC680388	similar to serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 3A	13	13255163	13264040	Rat
1562868	Serpinb3a	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A	13	13305950	13311099	Rat
1594391	LOC498210	similar to HBxAg transactivated protein 2	13	13311139	13322730	Rat
1549766	Serpinb3	serine protease inhibitor B3	13	13339447	13344912	Rat
1306497	Serpinb11	serpin peptidase inhibitor, clade B (ovalbumin), member 11	13	13391087	13409501	Rat
1591786	LOC680414	hypothetical protein LOC680414	13	13430294	13433939	Rat
71063	Serpinb7	serpin peptidase inhibitor, clade B (ovalbumin), member 7	13	13464818	13506372	Rat
621823	Serpinb2	serpin peptidase inhibitor, clade B (ovalbumin), member 2	13	13632596	13641605	Rat
628853	Serpinb10	serpin peptidase inhibitor, clade B (ovalbumin), member 10	13	13644626	13662376	Rat
1309833	Serpinb8	serpin peptidase inhibitor, clade B (ovalbumin), member 8	13	13718139	13741460	Rat
1583819	LOC363949	similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (38 kDa BFA-dependent ADP-ribosylation substrate) (BARS-38)	13	13912715	13913706	Rat
2323780	LOC100362913	hypothetical LOC100362913	13	13955584	13960985	Rat
1590588	LOC680572	hypothetical protein LOC680572	13	15793077	15796239	Rat
1560523	RGD1560523	similar to S-adenosylmethionine synthetase gamma form (Methionine adenosyltransferase)	13	16276947	16288371	Rat
1565627	RGD1565627	similar to High mobility group protein 1 (HMG-1)	13	16324082	16324896	Rat
1598193	LOC501848	similar to macrophage expressed gene 1	13	16410387	16420428	Rat
2319363	LOC100361811	ribosomal protein L21-like	13	16586288	16586785	Rat
1594585	LOC288930	similar to Beta-arrestin-1 (Arrestin, beta 1)	13	16703373	16705474	Rat
2324768	LOC100363121	hypothetical LOC100363121	13	16757901	16758138	Rat
1306856	Cdh7	cadherin 7, type 2	13	16884417	17020846	Rat
2324722	LOC100363168	transmembrane protein 64-like	13	17483942	17484913	Rat
1583818	Hnrnpa1-ps1	heterogeneous nuclear ribonucleoprotein A1, pseudogene 1	13	17545955	17547448	Rat
2319174	LOC100361905	heterogeneous nuclear ribonucleoprotein A1-like	13	17547023	17547421	Rat
1562794	RGD1562794	similar to establishment of cohesion 1 homolog 1	13	17642345	17644803	Rat
2323366	LOC100363274	UPF3 regulator of nonsense transcripts homolog B-like	13	17740384	17803750	Rat
1307169	Cdh19	cadherin 19, type 2	13	18148715	18230353	Rat
1594164	LOC680267	similar to Elongation factor 2 (EF-2)	13	18218926	18222067	Rat
1583817	LOC363952	similar to Dipeptidyl-peptidase 3 (Dipeptidyl-peptidase III) (DPP III) (Dipeptidyl aminopeptidase III) (Dipeptidyl arylamidase III)	13	18364662	18366225	Rat
1561585	RGD1561585	similar to PLRR-4 polymorphic leucine-rich repeat protein	13	18857190	18858173	Rat
1588175	LOC680791	similar to glyceraldehyde-3-phosphate dehydrogenase	13	18893467	18894526	Rat
1583816	LOC363954	similar to Elongation factor 2 kinase (eEF-2 kinase) (eEF-2K) (Calcium/calmodulin-dependent eukaryotic elongation factor 2 kinase)	13	19100172	19105051	Rat
1559752	RGD1559752	similar to MITF-2B protein	13	19107032	19108553	Rat
1307724	Dsel	dermatan sulfate epimerase-like	13	19394146	19398749	Rat
1587032	LOC680851	similar to Pyruvate kinase isozyme M2	13	19400417	19482078	Rat
2323476	LOC100359764	40S ribosomal protein S3a-like	13	19645444	19646134	Rat
1587015	LOC680868	similar to LIM and SH3 domain protein 1 (LASP-1) (MLN 50)	13	19669825	19670550	Rat
2323123	LOC100359921	hypothetical LOC100359921	13	20699118	20706439	Rat
1586154	LOC361139	similar to glyceraldehyde-3-phosphate dehydrogenase	13	21269200	21270200	Rat
1583815	LOC363956	similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin)	13	21325903	21327422	Rat
2322898	LOC100360047	ras-GTPase-activating protein SH3-domain binding protein	13	21330084	21332057	Rat
1585842	LOC680947	similar to cyclin G associated kinase	13	21419767	21423243	Rat
2322939	LOC100360006	ChaC, cation transport regulator-like 2	13	21434388	21447740	Rat
1585812	LOC680977	similar to Probable ATP-dependent RNA helicase DDX6	13	22162850	22164301	Rat
1583813	LOC363958	similar to Eukaryotic translation initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66) (eIF3d)	13	22198813	22200379	Rat
1565762	RGD1565762	similar to High mobility group protein 1 (HMG-1)	13	22271016	22271729	Rat
1566343	Cntnap5c	contactin associated protein-like 5C	13	22856230	23913512	Rat
1591709	LOC680491	similar to heat shock protein 1, alpha	13	22885847	22888555	Rat
2322708	LOC100360141	solute carrier family 25, member 36-like	13	24568324	24569639	Rat
2322665	LOC100360184	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)	13	24598524	24599986	Rat
1584664	LOC681080	similar to mesoderm development candidate 1	13	24718720	24866828	Rat
2322306	LOC100360347	hypothetical LOC100360347	13	25365360	25367457	Rat
1583547	LOC681144	similar to heat shock protein 1, alpha	13	26002218	26002484	Rat
2322265	LOC100360388	hypothetical LOC100360388	13	26206714	26213079	Rat
1562598	RGD1562598	similar to 60S ribosomal protein L4 (L1)	13	26296491	26297468	Rat
1583494	LOC681197	similar to FERM domain containing 3	13	26870701	26872471	Rat
1559812	Cntnap5a	contactin associated protein-like 5A	13	28709670	29730378	Rat
1559582	RGD1559582	similar to Nol5a_predicted protein	13	28755733	28755936	Rat
2325079	LOC100359649	selenoprotein K	13	29444736	29446465	Rat
1305620	Myl6l	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle-like	13	29671403	29672085	Rat
1596977	LOC678707	similar to malignant T cell amplified sequence 1	13	30495429	30495973	Rat
2320752	LOC100361108	hypothetical LOC100361108	13	30690699	30734583	Rat
2320711	LOC100361150	novel KRAB box domain containing protein-like	13	30858530	30860421	Rat
621107	Tsn	translin	13	30917400	30928092	Rat
708462	Mki67ip	Mki67 (FHA domain) interacting nucleolar phosphoprotein	13	30944169	30953973	Rat
1596932	LOC678752	similar to 60S ribosomal protein L7	13	31036823	31037545	Rat
1310970	Clasp1	cytoplasmic linker associated protein 1	13	31046104	31269294	Rat
2320526	LOC100361237	heat shock protein 1, alpha	13	31047506	31049268	Rat
1305456	Tfcp2l1	transcription factor CP2-like 1	13	31288228	31401482	Rat
1585929	LOC679660	similar to ribosomal protein S10	13	31517811	31518251	Rat
1585916	LOC679673	similar to Ubiquitin-conjugating enzyme E2S (Ubiquitin-conjugating enzyme E2-24 kDa) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (E2-EPF5)	13	31527903	31528981	Rat
1309270	Gli2	GLI family zinc finger 2	13	31551089	31607264	Rat
1583613	LOC679877	hypothetical protein LOC679877	13	32045527	32047800	Rat
1583597	LOC679893	hypothetical protein LOC679893	13	32057191	32111138	Rat
2913	Inhbb	inhibin beta-B	13	32170987	32176689	Rat
619852	Ralb	v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)	13	32229646	32238410	Rat
1309602	Tmem185b	transmembrane protein 185B	13	32276974	32279005	Rat
1311366	Epb4.1l5	erythrocyte protein band 4.1-like 5	13	32373377	32426745	Rat
620712	Ptpn4	protein tyrosine phosphatase, non-receptor type 4	13	32430875	32611163	Rat
1596815	LOC680073	similar to globin inducing factor, fetal	13	32600126	32601307	Rat
1596793	LOC680095	hypothetical protein LOC680095	13	32605380	32611449	Rat
2320102	LOC100361463	hypothetical LOC100361463	13	32611318	32673672	Rat
1310320	Tmem177	transmembrane protein 177	13	32688858	32692283	Rat
1584968	Pcdp1	primary ciliary dyskinesia protein 1	13	32714725	32729670	Rat
1565260	RGD1565260	similar to tumor protein, translationally-controlled 1	13	32966625	33000084	Rat

Markers in Region (RGSC Genome Assembly v3.4)

The following Markers overlap with this region.

RGD ID	Symbol	Expected Size	Chr	Start	Stop	Species	Match
35975	D13Rat7	174	13	1084268	1084470	Rat	region
35975	D13Rat7	174	13	1084269	1084470	Rat	region
36922	D13Rat4	132	13	1265159	1265434	Rat	region
36922	D13Rat4	132	13	1265208	1265327	Rat	region
5503444	Trp53	0	13	1410189	1410517	Rat	region
40936	D13Rat107	249	13	1606290	1606545	Rat	region
40936	D13Rat107	249	13	1606291	1606545	Rat	region
5033157	RH137803	174	13	1988765	1988938	Rat	region
41432	D13Rat106	166	13	1995729	1995890	Rat	region
60549	D6Got8	165	13	2395522	2395687	Rat	region
60549	D6Got8	165	13	2395523	2395687	Rat	region
5031708	AU047414	232	13	2489821	2490047	Rat	region
39196	D13Rat68	148	13	2531588	2531740	Rat	region
39196	D13Rat68	148	13	2531589	2531740	Rat	region
1639128	D13Got210	284	13	2585684	2585962	Rat	region
5031664	AU047559	241	13	3596568	3596804	Rat	region
1631200	D0Got954	152	13	4461849	4462000	Rat	region
5068708	AU046982	92	13	4625682	4625773	Rat	region
60500	D6Got10	290	13	4788542	4788824	Rat	region
60500	D6Got10	290	13	4788543	4788824	Rat	region
1627719	D0Got506	190	13	4793036	4793225	Rat	region
34767	D13Rat35	133	13	5381727	5381860	Rat	region
34767	D13Rat35	133	13	5381728	5381860	Rat	region
5503350	Nlk-ps1	648	13	5491101	5491748	Rat	region
5028939	RH142898	142	13	5574131	5574272	Rat	region
7193011	D1Mit25	0	13	5794650	5796184	Rat	region
60726	D1Mit25	149	13	5953962	5954110	Rat	region
5035544	Ranbp1	0	13	6284035	6284506	Rat	region
5503244	UniSTS:237455	213	13	6284526	6284742	Rat	region
5063380	BI301796	196	13	6859811	6860006	Rat	region
5057117	AA957791	220	13	7106814	7106998	Rat	region
5067678	AU047601	173	13	7432300	7432472	Rat	region
1633646	D0Got479	263	13	7454317	7454579	Rat	region
34076	D13Mgh1	149	13	7538626	7538781	Rat	region
34076	D13Mgh1	149	13	7538627	7538781	Rat	region
5089243	AU049040	154	13	8116912	8117065	Rat	region
35208	D13Rat2	165	13	8156005	8156158	Rat	region
35208	D13Rat2	165	13	8156006	8156158	Rat	region
36630	D13Rat5	162	13	8292943	8293105	Rat	region
36630	D13Rat5	162	13	8292944	8293105	Rat	region
40618	D13Rat144	153	13	8341535	8341673	Rat	region
1628857	D13Got201	166	13	8875827	8875992	Rat	region
1630306	D13Got215	168	13	8875827	8875994	Rat	region
5069136	AU046701	150	13	8969847	8969996	Rat	region
5090857	AU050007	136	13	9727665	9727800	Rat	region
5053735	RH142820	173	13	9989784	9989960	Rat	region
1635404	D0Got43	201	13	10083451	10083651	Rat	region
1632825	D13Got218	123	13	10088277	10088399	Rat	region
1638308	D0Got133	210	13	10231715	10231924	Rat	region
36888	D13Rat6	143	13	10478253	10478396	Rat	region
36888	D13Rat6	143	13	10478254	10478396	Rat	region
36699	D13Rat1	290	13	10555730	10556042	Rat	region
36699	D13Rat1	290	13	10555731	10556042	Rat	region
66677	D13Mco14	250	13	10902848	10903444	Rat	region
5077272	RH139661	209	13	11159121	11159329	Rat	region
5069060	AU046749	174	13	11218407	11218580	Rat	region
5080296	RH141498	198	13	11307017	11307214	Rat	region
5072162	RH136688	187	13	11307411	11307597	Rat	region
5071932	RH135368	203	13	11307832	11308034	Rat	region
1629574	D13Got217	113	13	11460335	11460447	Rat	region
1638571	D0Got140	99	13	11460348	11460446	Rat	region
42983	D13Rat166	243	13	11534040	11534292	Rat	region
5067886	AU047477	186	13	11550362	11550547	Rat	region
35649	D13Rat3	162	13	11626910	11627087	Rat	region
35649	D13Rat3	162	13	11626911	11627087	Rat	region
5077966	RH140064	211	13	11665936	11666146	Rat	region
5044328	RH130540	180	13	11666366	11666545	Rat	region
5048916	RH133180	203	13	11668774	11668976	Rat	region
5067310	AU047833	247	13	11672619	11672865	Rat	region
5065814	BE109920	169	13	11731988	11732156	Rat	region
1635185	D13Got214	116	13	11776297	11776407	Rat	region
5504831	ha2188	868	13	11783080	11783947	Rat	region
1632298	D13Got221	194	13	12016382	12016572	Rat	region
5500991	PMC114224P2	335	13	12023334	12023668	Rat	region
5080154	RH141416	201	13	12029973	12030173	Rat	region
1631215	D0Got763	161	13	12042572	12042732	Rat	region
5050794	RH134262	211	13	12132275	12132485	Rat	region
5073268	RH137338	197	13	12147342	12147538	Rat	region
5055461	RH143814	197	13	12207154	12207356	Rat	region
1633806	D0Got218	175	13	12232055	12232229	Rat	region
1629858	D0Uwm1	118	13	12317442	12317559	Rat	region
5057257	AI555189	198	13	12372823	12373020	Rat	region
66674	D13Mco13	180	13	12559984	12560153	Rat	region
66674	D13Mco13	180	13	12559985	12560153	Rat	region
5049086	RH133278	152	13	12565474	12565625	Rat	region
5067212	AU047893	284	13	12584032	12584315	Rat	region
5031806	AU047086	145	13	12677063	12677207	Rat	region
5046402	RH131732	213	13	12778905	12779117	Rat	region
5035779	PMC16825P1	703	13	12904296	12904998	Rat	region
5500971	PMC104155P1	268	13	12904298	12904565	Rat	region
5501039	PMC125347P1	447	13	12904359	12904805	Rat	region
5503446	UniSTS:461954	348	13	12904385	12904732	Rat	region
5031350	PMC150726P1	294	13	12904554	12904847	Rat	region
5504614	PMC316415P3	600	13	12904815	12905414	Rat	region
5028779	RH142296	155	13	12904886	12905042	Rat	region
5044792	RH130806	201	13	12908226	12908426	Rat	region
5026732	RH133326	199	13	12913310	12913508	Rat	region
5034728	BE100511	160	13	12915374	12915533	Rat	region
5077880	RH140013	218	13	12959869	12960086	Rat	region
39032	D13Rat60	131	13	13053808	13053933	Rat	region
39032	D13Rat60	131	13	13053809	13053933	Rat	region
5070672	RH134638	210	13	13057325	13057534	Rat	region
5032733	RH135101	209	13	13137086	13137294	Rat	region
5027577	BB233602	115	13	13662214	13662328	Rat	region
5069322	AU046575	212	13	13891942	13892152	Rat	region
5044618	RH130707	204	13	14829260	14829457	Rat	region
1628694	D0Got758	157	13	15680389	15680545	Rat	region
5088543	AU048632	239	13	15681773	15682011	Rat	region
1637860	D0Got375	125	13	16354968	16355092	Rat	region
5503288	UniSTS:237739	237	13	17641585	17641821	Rat	region
5045634	RH131290	184	13	17641634	17641817	Rat	region
36992	D13Rat13	118	13	18453779	18453887	Rat	region
36992	D13Rat13	118	13	18453780	18453887	Rat	region
41632	D13Rat145	143	13	18527679	18527816	Rat	region
41632	D13Rat145	143	13	18527680	18527816	Rat	region
5077420	RH139746	194	13	19407918	19408111	Rat	region
1632965	D0Got561	287	13	19611519	19611800	Rat	region
5068256	AU047255	187	13	20159617	20159803	Rat	region
37862	D13Rat65	165	13	20159676	20159843	Rat	region
37862	D13Rat65	165	13	20159677	20159843	Rat	region
5031656	AU047585	112	13	20198424	20198535	Rat	region
60596	D8Got131	215	13	20311918	20312133	Rat	region
60596	D8Got131	215	13	20311919	20312133	Rat	region
1636914	D13Got202	228	13	20589358	20589585	Rat	region
1631875	D13Got209	267	13	20704702	20704968	Rat	region
5069470	AU046476	286	13	20761210	20761495	Rat	region
5504863	ha2636	1350	13	20879375	20880724	Rat	region
37396	D13Rat93	227	13	20971360	20971607	Rat	region
37396	D13Rat93	227	13	20971361	20971607	Rat	region
1637730	D0Got787	298	13	21503689	21503985	Rat	region
1638946	D13Got205	198	13	21719392	21719589	Rat	region
36675	D13Rat11	170	13	21728847	21729028	Rat	region
36675	D13Rat11	170	13	21728848	21729028	Rat	region
40188	D13Rat108	219	13	21828843	21829056	Rat	region
40188	D13Rat108	219	13	21828844	21829056	Rat	region
5067024	AU048010	286	13	21836779	21837068	Rat	region
1637661	D13Got204	188	13	22080339	22080521	Rat	region
5501664	UniSTS:265520	0	13	22163646	22164135	Rat	region
60514	D6Got154	172	13	22914852	22915024	Rat	region
60514	D6Got154	172	13	22914853	22915024	Rat	region
36612	D13Rat9	142	13	22952154	22952295	Rat	region
36612	D13Rat9	142	13	22952155	22952295	Rat	region
42980	D13Rat168	237	13	23227888	23228096	Rat	region
42980	D13Rat168	237	13	23227889	23228096	Rat	region
42380	D13Rat169	202	13	23227922	23228100	Rat	region
42380	D13Rat169	202	13	23227923	23228100	Rat	region
1630316	D0Got1084	139	13	23298909	23299047	Rat	region
1633060	D0Got175	206	13	23434122	23434327	Rat	region
5036715	AU048969	200	13	23470008	23470207	Rat	region
1629335	D0Got914	286	13	23617250	23617535	Rat	region
1632552	D0Got715	219	13	23617315	23617533	Rat	region
5089241	AU049039	148	13	23696246	23696393	Rat	region
1630490	D13Got203	144	13	23714026	23714171	Rat	region
5504893	ha3113	1037	13	24325888	24326924	Rat	region
67808	D13Uwm3	286	13	24615904	24616204	Rat	region
66489	D13Uia10	169	13	24687552	24687825	Rat	region
5066586	AU048269	279	13	24702520	24702792	Rat	region
33923	D13Mit1	124	13	25430110	25430276	Rat	region
33923	D13Mit1	124	13	25430112	25430276	Rat	region
67816	D13Uwm5	122	13	25556129	25556262	Rat	region
36251	D13Rat8	176	13	25868714	25869000	Rat	region
36251	D13Rat8	176	13	25868787	25868969	Rat	region
1635659	D0Got771	294	13	25969753	25970046	Rat	region
35701	D13Rat10	148	13	26000541	26000683	Rat	region
35701	D13Rat10	148	13	26000542	26000683	Rat	region
5089011	AU048902	211	13	26000603	26000813	Rat	region
1636875	D0Got1002	141	13	26159319	26159459	Rat	region
42979	D13Rat143	209	13	26366405	26366610	Rat	region
42979	D13Rat143	209	13	26366406	26366610	Rat	region
1641535	D13Got212	238	13	26687143	26687380	Rat	region
1628892	D13Got213	181	13	27124663	27124845	Rat	region
5084416	AI176736	96	13	27240254	27240348	Rat	region
1630867	D0Got74	98	13	27275209	27275306	Rat	region
5504091	px-14b9	160	13	27482725	27482884	Rat	region
37968	D13Rat55	234	13	27504075	27504303	Rat	region
37968	D13Rat55	234	13	27504076	27504303	Rat	region
1638811	D0Got1023	127	13	27589479	27589605	Rat	region
67252	D13Arb2	216	13	27596810	27597026	Rat	region
67252	D13Arb2	216	13	27596811	27597026	Rat	region
42976	D13Rat170	204	13	28296639	28296843	Rat	region
42976	D13Rat170	204	13	28296640	28296843	Rat	region
5066808	AU048138	135	13	28485966	28486095	Rat	region
42981	D13Rat167	173	13	28489800	28489977	Rat	region
42981	D13Rat167	173	13	28489801	28489977	Rat	region
36289	D13Rat36	176	13	28515135	28515285	Rat	region
36289	D13Rat36	176	13	28515136	28515285	Rat	region
5031724	AU047359	261	13	28538847	28539107	Rat	region
37180	D13Rat64	231	13	28645213	28645448	Rat	region
37180	D13Rat64	231	13	28645214	28645448	Rat	region
60758	D13Wox1		13	28821098	28821258	Rat	region
7192534	D13Wox1	0	13	28821098	28821258	Rat	region
1636766	D13Got208	254	13	28830710	28830965	Rat	region
5068964	AU046813	184	13	28876786	28876969	Rat	region
60758	D13Wox1		13	28898053	28898225	Rat	region
7192534	D13Wox1	0	13	28898053	28898225	Rat	region
66679	D13Mco17	225	13	29074573	29074793	Rat	region
66679	D13Mco17	225	13	29074574	29074793	Rat	region
60520	D6Got193	215	13	29297622	29297837	Rat	region
60520	D6Got193	215	13	29297623	29297837	Rat	region
1637994	D0Got589	149	13	29603732	29603880	Rat	region
1632905	D13Got206	228	13	29638367	29638594	Rat	region
5077288	RH139670	183	13	30064939	30065121	Rat	region
5036811	AU049280	280	13	30158226	30158505	Rat	region
1629064	D13Wox11	310	13	30208652	30208961	Rat	region
1634335	D13Got211	261	13	30208736	30208996	Rat	region
5028045	MHAa87a6.seq	0	13	30516202	30516385	Rat	region
5033179	RH137876	139	13	30959443	30959581	Rat	region
5068382	AU047180	193	13	30966743	30966935	Rat	region
35539	D13Rat14	139	13	31080414	31080551	Rat	region
35539	D13Rat14	139	13	31080415	31080551	Rat	region
40372	D13Rat110	128	13	31156422	31156558	Rat	region
40372	D13Rat110	128	13	31156423	31156558	Rat	region
5066468	AU048339	169	13	31259451	31259619	Rat	region
5499709	UniSTS:234193	235	13	31266950	31267184	Rat	region
37924	D13Rat59	200	13	31321718	31321920	Rat	region
37924	D13Rat59	200	13	31321719	31321920	Rat	region
1637536	D13Got216	187	13	31324009	31324195	Rat	region
5504556	PMC304100P4	282	13	31345051	31345332	Rat	region
5504556	PMC304100P4	282	13	31401163	31401444	Rat	region
5028705	D8S560	0	13	31417148	31417198	Rat	region
1641395	D0Got1049	229	13	31626107	31626335	Rat	region
1629565	D13M1Mit189	161	13	31699189	31699349	Rat	region
67812	D13Uwm4	125	13	31759398	31759518	Rat	region
5067130	AU047944	208	13	31765738	31765945	Rat	region
39804	D13Rat111	128	13	32030139	32030259	Rat	region
39804	D13Rat111	128	13	32030140	32030259	Rat	region
1630324	D0Got782	144	13	32074195	32074338	Rat	region
10809	D13Mgh16	140	13	32172104	32172248	Rat	region
10809	D13Mgh16	140	13	32172105	32172248	Rat	region
5501211	PMC155220P1	276	13	32172903	32173178	Rat	region
5041632	RH128968	155	13	32229690	32229846	Rat	region
1639079	D13Got219	123	13	32272538	32272655	Rat	region
5028025	MHAa21a5.seq	203	13	32339477	32339679	Rat	region
5039788	RH127907	191	13	32373587	32373777	Rat	region
1582008	D13Hmgc37	217	13	32396527	32396743	Rat	region
5037215	BE199656	116	13	32431041	32431156	Rat	region
5045896	RH131441	192	13	32431421	32431612	Rat	region
66509	D13Mco4	254	13	32466682	32466916	Rat	region
66509	D13Mco4	254	13	32466683	32466916	Rat	region
5055261	RH143699	140	13	32610968	32611107	Rat	region
38480	D13Rat104	141	13	32617214	32617359	Rat	region
38480	D13Rat104	141	13	32617215	32617359	Rat	region
37938	D13Rat81	210	13	32653485	32653685	Rat	region
37938	D13Rat81	210	13	32653486	32653685	Rat	region
5043640	RH130142	155	13	32688879	32689033	Rat	region
5027857	13.MMHAP25FRE7.seq	185	13	32714512	32714696	Rat	region
1641102	D0Got595	172	13	32890797	32890968	Rat	region
1638161	D13Got225	204	13	32894111	32894314	Rat	region
1634693	D13Got223	200	13	33006545	33006744	Rat	region
1581966	D13Hmgc52	248	13	33136711	33136958	Rat	region
1628782	D13Got224	131	13	33136827	33136957	Rat	region
40662	D13Rat113	134	13	33188477	33188609	Rat	region
40662	D13Rat113	134	13	33188478	33188609	Rat	region

Position Markers

QTLs in Region (RGSC Genome Assembly v3.4)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61339	Bp24	Blood pressure QTL 24		.05	Blood pressure		13	25430110	46275213	Rat
631645	Bp121	Blood pressure QTL 121	3.3		Blood pressure	systolic	13	15989872	60989872	Rat
738036	Lnnr4	Liver neoplastic nodule remodeling QTL 4	3.64		Liver neoplastic nodule remodeling frequency		13	1	43835207	Rat
70170	Eae14	Experimental allergic encephalomyelitis QTL 14		.0024	Brain/spinal cord inflammation	demyelination	13	24701710	69701710	Rat
1300163	Cardf1	Cardiac cell morphology QTL 1	4.18		Cardiac function	salt-loaded aortic lesions	13	1265159	46912163	Rat
1331784	Bp222	Blood pressure QTL 222	2.944		Blood pressure	mean arterial	13	7538626	55033994	Rat
6893338	Cm76	Cardiac mass QTL 76	0	.99	Cardiac mass	body weight adjusted	13	25198204	70198204	Rat
1558644	Cm45	Cardiac mass QTL 45	3.6	.002	Cardiac mass	body weight adjusted	13	25198204	70198204	Rat
1581554	Pur11	Proteinuria QTL 11			Renal function	urine protein level	13	25430276	80482326	Rat
1581570	Eae17	Experimental allergic encephalomyelitis QTL 17	4.1		Brain/spinal cord inflammation	demyelination	13	28645448	106366082	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			Renal function	urine albumin level	13	25430276	80482326	Rat
2301962	Cm72	Cardiac mass QTL 72	4.12		Cardiac mass	left ventricle	13	23769973	68769973	Rat
2303030	Bp327	Blood pressure QTL 327			Blood pressure	salt-loaded mean arterial	13	32030139	42627837	Rat
2303031	Bp326	Blood pressure QTL 326			Blood pressure	salt-loaded mean arterial	13	1084268	13053933	Rat
2302275	Gluco37	Glucose level QTL 37	3.8		Glucose level		13	1265159	47698301	Rat
2317046	Aia8	Adjuvant induced arthritis QTL 8	3.9700000286102295		Joint/bone inflammation	adjuvant induced	13	10688543	55688543	Rat
2317040	Aia21	Adjuvant induced arthritis QTL 21	2.75		Joint/bone inflammation	adjuvant induced	13	10688543	55688543	Rat
2317044	Aia23	Adjuvant induced arthritis QTL 23	2.3		Joint/bone inflammation	adjuvant induced	13	1084268	33188609	Rat
2317034	Aia9	Adjuvant induced arthritis QTL 9	4.62		Joint/bone inflammation	adjuvant induced	13	1084268	33188609	Rat
2317027	Aia22	Adjuvant induced arthritis QTL 22	2.29		Joint/bone inflammation	adjuvant induced	13	1	23584369	Rat
631672	Iddm12	Insulin dependent diabetes mellitus QTL 12	2.2	.0032	Glucose level		13	25430110	35472503	Rat
1354621	Rf47	Renal function QTL 47	3.7		Kidney renin concentration		13	32030139	105788017	Rat
61391	Bp5	Blood pressure QTL 5	5.6		Blood pressure	diastolic	13	23769074	68769074	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		Renal pathology	glomerulus inflammation	13	10556042	106075835	Rat

Additional Information

RGD Curation Notes

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RGD Object Information
RGD ID:	2317044
Created:	2010-03-11
Species:	Rattus norvegicus
Last Modified:	2010-03-11
Status:	ACTIVE