Lrrfip2 (LRR binding FLII interacting protein 2) - Rat Genome Database

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Pathways
Gene: Lrrfip2 (LRR binding FLII interacting protein 2) Rattus norvegicus
Analyze
Symbol: Lrrfip2
Name: LRR binding FLII interacting protein 2
RGD ID: 1306234
Description: Predicted to enable LRR domain binding activity. Predicted to be involved in Wnt signaling pathway and regulation of DNA-templated transcription. Predicted to act upstream of or within MyD88-dependent toll-like receptor 4 signaling pathway; MyD88-independent toll-like receptor signaling pathway; and positive regulation of tumor necrosis factor production. Orthologous to human LRRFIP2 (LRR binding FLII interacting protein 2); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: leucine rich repeat (in FLII) interacting protein 2; leucine-rich repeat flightless-interacting protein 2; LOC301035; LRR FLII-interacting protein 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88119,969,908 - 120,071,270 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)EnsemblGRCr8
mRatBN7.28111,091,453 - 111,193,947 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8116,705,921 - 116,808,610 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08114,905,144 - 115,007,841 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08112,747,970 - 112,850,663 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08119,381,666 - 119,484,125 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8119,382,011 - 119,483,043 (+)Ensemblrn6Rnor6.0
Rnor_5.08118,722,753 - 118,825,642 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48115,509,800 - 115,612,552 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8110,373,666 - 110,474,463 (+)NCBICelera
RGSC_v3.18115,576,635 - 115,632,006 (+)NCBI
Cytogenetic Map8q32NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10366446   PMID:12477932   PMID:15489334   PMID:19265123   PMID:24625528   PMID:25002582   PMID:35352799  


Genomics

Comparative Map Data
Lrrfip2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88119,969,908 - 120,071,270 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)EnsemblGRCr8
mRatBN7.28111,091,453 - 111,193,947 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8116,705,921 - 116,808,610 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08114,905,144 - 115,007,841 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08112,747,970 - 112,850,663 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08119,381,666 - 119,484,125 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8119,382,011 - 119,483,043 (+)Ensemblrn6Rnor6.0
Rnor_5.08118,722,753 - 118,825,642 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48115,509,800 - 115,612,552 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8110,373,666 - 110,474,463 (+)NCBICelera
RGSC_v3.18115,576,635 - 115,632,006 (+)NCBI
Cytogenetic Map8q32NCBI
LRRFIP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38337,052,626 - 37,176,360 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl337,052,626 - 37,183,689 (-)Ensemblhg38GRCh38
GRCh37337,094,117 - 37,217,851 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36337,069,502 - 37,191,086 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34337,069,502 - 37,191,086NCBI
Celera337,036,882 - 37,151,380 (-)NCBICelera
Cytogenetic Map3p22.2NCBI
HuRef337,034,886 - 37,159,241 (-)NCBIHuRef
CHM1_1337,045,747 - 37,169,490 (-)NCBICHM1_1
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBIT2T-CHM13v2.0
Lrrfip2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399110,946,614 - 111,054,736 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9110,946,660 - 111,054,736 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm389111,117,546 - 111,225,668 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9111,117,592 - 111,225,668 (+)Ensemblmm10GRCm38
MGSCv379111,020,615 - 111,128,172 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv369110,962,948 - 111,070,839 (+)NCBIMGSCv36mm8
Celera9110,842,030 - 110,948,747 (+)NCBICelera
Cytogenetic Map9F3NCBI
cM Map960.92NCBI
Lrrfip2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554213,938,054 - 4,066,060 (-)Ensembl
ChiLan1.0NW_0049554213,938,054 - 4,066,701 (-)NCBIChiLan1.0ChiLan1.0
LRRFIP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2237,014,695 - 37,147,721 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1337,019,460 - 37,143,497 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0336,959,065 - 37,082,971 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1337,248,015 - 37,371,624 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl337,248,015 - 37,371,448 (-)EnsemblpanPan2panpan1.1
LRRFIP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1236,939,476 - 7,047,721 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl236,940,318 - 7,047,610 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha236,979,420 - 7,087,706 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0237,225,350 - 7,333,675 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl237,224,044 - 7,332,685 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1237,044,952 - 7,153,058 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0237,187,174 - 7,294,999 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0237,177,374 - 7,285,698 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Lrrfip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118193,464,158 - 193,553,883 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647326,602,324 - 26,692,285 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647326,602,373 - 26,692,507 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LRRFIP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1321,670,424 - 21,793,043 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11321,666,896 - 21,790,352 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21323,693,692 - 23,766,073 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LRRFIP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1152,231,423 - 2,362,394 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl152,231,525 - 2,361,544 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606310,967,767 - 11,099,245 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lrrfip2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478815,158,920 - 15,294,785 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Lrrfip2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v18101,686,923 - 101,791,468 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Lrrfip2
764 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:178
Count of miRNA genes:141
Interacting mature miRNAs:156
Transcripts:ENSRNOT00000056060
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)8105462581132782436Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)882352698127352698Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)861019838121662124Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)880768445125768445Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)880768445125768445Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)870041301121080908Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)884192326129192326Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8103375781129871912Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)8102413464132782436Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)855428333127966348Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
2313400Anxrr25Anxiety related response QTL 25aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)898145073122898010Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)880768445125768445Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)880768445125768445Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)891340911131690273Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001024761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001395739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC097955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000056060   ⟹   ENSRNOP00000052912
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)Ensembl
mRatBN7.2 Ensembl8111,091,819 - 111,192,865 (+)Ensembl
Rnor_6.0 Ensembl8119,382,011 - 119,483,043 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097509   ⟹   ENSRNOP00000089166
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)Ensembl
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099949   ⟹   ENSRNOP00000091298
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)Ensembl
mRatBN7.2 Ensembl8111,091,819 - 111,192,865 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000100197   ⟹   ENSRNOP00000079448
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)Ensembl
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108084   ⟹   ENSRNOP00000082163
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)Ensembl
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108675   ⟹   ENSRNOP00000094297
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)Ensembl
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000109717   ⟹   ENSRNOP00000097137
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)Ensembl
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000112179   ⟹   ENSRNOP00000097455
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)Ensembl
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000114965   ⟹   ENSRNOP00000085249
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)Ensembl
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000119180   ⟹   ENSRNOP00000079352
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8119,969,871 - 120,073,475 (+)Ensembl
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)Ensembl
RefSeq Acc Id: NM_001024761   ⟹   NP_001019932
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,235 - 120,071,270 (+)NCBI
mRatBN7.28111,091,819 - 111,192,866 (+)NCBI
Rnor_6.08119,382,011 - 119,483,044 (+)NCBI
Rnor_5.08118,722,753 - 118,825,642 (+)NCBI
RGSC_v3.48115,509,800 - 115,612,552 (+)RGD
Celera8110,373,666 - 110,474,463 (+)RGD
Sequence:
RefSeq Acc Id: NM_001395739   ⟹   NP_001382668
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,969,908 - 120,071,270 (+)NCBI
mRatBN7.28111,091,492 - 111,192,866 (+)NCBI
RefSeq Acc Id: XM_006243939   ⟹   XP_006244001
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,455 - 111,193,947 (+)NCBI
Rnor_6.08119,381,697 - 119,484,125 (+)NCBI
Rnor_5.08118,722,753 - 118,825,642 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243960   ⟹   XP_006244022
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,465 - 111,193,947 (+)NCBI
Rnor_6.08119,381,666 - 119,484,125 (+)NCBI
Rnor_5.08118,722,753 - 118,825,642 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008766616   ⟹   XP_008764838
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,453 - 111,193,947 (+)NCBI
Rnor_6.08119,381,695 - 119,484,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008766617   ⟹   XP_008764839
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,265 - 120,071,270 (+)NCBI
mRatBN7.28111,092,591 - 111,193,947 (+)NCBI
Rnor_6.08119,382,968 - 119,484,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008766618   ⟹   XP_008764840
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,195 - 120,071,270 (+)NCBI
mRatBN7.28111,091,889 - 111,193,947 (+)NCBI
Rnor_6.08119,381,993 - 119,484,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008766619   ⟹   XP_008764841
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,039 - 120,071,270 (+)NCBI
mRatBN7.28111,091,453 - 111,193,947 (+)NCBI
Rnor_6.08119,381,695 - 119,484,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008766623   ⟹   XP_008764845
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,454 - 111,193,947 (+)NCBI
Rnor_6.08119,381,694 - 119,484,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008766624   ⟹   XP_008764846
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,454 - 111,193,947 (+)NCBI
Rnor_6.08119,381,695 - 119,484,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008766625   ⟹   XP_008764847
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,454 - 111,193,947 (+)NCBI
Rnor_6.08119,381,695 - 119,484,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008766626   ⟹   XP_008764848
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,454 - 111,193,947 (+)NCBI
Rnor_6.08119,381,696 - 119,484,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008766628   ⟹   XP_008764850
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,454 - 111,193,947 (+)NCBI
Rnor_6.08119,381,696 - 119,484,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017595600   ⟹   XP_017451089
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,454 - 111,193,947 (+)NCBI
Rnor_6.08119,381,695 - 119,484,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039081259   ⟹   XP_038937187
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,454 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081260   ⟹   XP_038937188
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,454 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081261   ⟹   XP_038937189
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,454 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081271   ⟹   XP_038937199
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,458 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081272   ⟹   XP_038937200
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,458 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081273   ⟹   XP_038937201
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,459 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081277   ⟹   XP_038937205
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,459 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081281   ⟹   XP_038937209
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,461 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081282   ⟹   XP_038937210
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,462 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081283   ⟹   XP_038937211
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,462 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081284   ⟹   XP_038937212
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,028,038 - 120,071,270 (+)NCBI
mRatBN7.28111,147,680 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081285   ⟹   XP_038937213
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,462 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_039081286   ⟹   XP_038937214
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
mRatBN7.28111,091,460 - 111,193,947 (+)NCBI
RefSeq Acc Id: XM_063265272   ⟹   XP_063121342
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265273   ⟹   XP_063121343
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265274   ⟹   XP_063121344
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265275   ⟹   XP_063121345
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265276   ⟹   XP_063121346
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,039 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265277   ⟹   XP_063121347
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265278   ⟹   XP_063121348
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265279   ⟹   XP_063121349
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,039 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265280   ⟹   XP_063121350
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265281   ⟹   XP_063121351
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,039 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265282   ⟹   XP_063121352
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265283   ⟹   XP_063121353
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265284   ⟹   XP_063121354
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265285   ⟹   XP_063121355
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,039 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265286   ⟹   XP_063121356
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265287   ⟹   XP_063121357
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,039 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265288   ⟹   XP_063121358
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,039 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265290   ⟹   XP_063121360
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,028,041 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265291   ⟹   XP_063121361
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,039 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265292   ⟹   XP_063121362
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,039 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265293   ⟹   XP_063121363
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,028,046 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265294   ⟹   XP_063121364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,028,047 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265295   ⟹   XP_063121365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
RefSeq Acc Id: XM_063265296   ⟹   XP_063121366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88119,970,042 - 120,071,270 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001019932 (Get FASTA)   NCBI Sequence Viewer  
  NP_001382668 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244001 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244022 (Get FASTA)   NCBI Sequence Viewer  
  XP_008764838 (Get FASTA)   NCBI Sequence Viewer  
  XP_008764839 (Get FASTA)   NCBI Sequence Viewer  
  XP_008764840 (Get FASTA)   NCBI Sequence Viewer  
  XP_008764841 (Get FASTA)   NCBI Sequence Viewer  
  XP_008764845 (Get FASTA)   NCBI Sequence Viewer  
  XP_008764846 (Get FASTA)   NCBI Sequence Viewer  
  XP_008764847 (Get FASTA)   NCBI Sequence Viewer  
  XP_008764848 (Get FASTA)   NCBI Sequence Viewer  
  XP_008764850 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451089 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937187 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937188 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937189 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937199 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937200 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937201 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937205 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937209 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937210 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937211 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937212 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937213 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937214 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121342 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121343 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121344 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121345 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121346 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121347 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121348 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121349 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121350 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121351 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121352 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121353 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121354 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121355 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121356 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121357 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121358 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121360 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121361 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121362 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121363 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121364 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121365 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121366 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH97955 (Get FASTA)   NCBI Sequence Viewer  
  EDL77037 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000052912.2
  ENSRNOP00000079352
  ENSRNOP00000079448
  ENSRNOP00000082163
  ENSRNOP00000091298
  ENSRNOP00000097455
GenBank Protein Q4V7E8 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001019932   ⟸   NM_001024761
- Peptide Label: isoform 1
- UniProtKB: Q4V7E8 (UniProtKB/Swiss-Prot),   A0A8I5ZMY2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006244022   ⟸   XM_006243960
- Peptide Label: isoform X35
- UniProtKB: A0A8I5ZQP7 (UniProtKB/TrEMBL),   A0A8I5ZMY2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006244001   ⟸   XM_006243939
- Peptide Label: isoform X11
- UniProtKB: A0A8I6AUZ7 (UniProtKB/TrEMBL),   A0A8I6GLX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764845   ⟸   XM_008766623
- Peptide Label: isoform X2
- UniProtKB: A0A8I6GLX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764841   ⟸   XM_008766619
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZUL9 (UniProtKB/TrEMBL),   A0A8I6GLX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764838   ⟸   XM_008766616
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZUL9 (UniProtKB/TrEMBL),   A0A8I6GLX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764847   ⟸   XM_008766625
- Peptide Label: isoform X5
- UniProtKB: A0A8I6GLX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764846   ⟸   XM_008766624
- Peptide Label: isoform X3
- UniProtKB: A0A8I6GLX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764848   ⟸   XM_008766626
- Peptide Label: isoform X6
- UniProtKB: A0A8I6A2V6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764850   ⟸   XM_008766628
- Peptide Label: isoform X8
- UniProtKB: A0A8I6A2V6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764840   ⟸   XM_008766618
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZUL9 (UniProtKB/TrEMBL),   A0A8I6GLX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764839   ⟸   XM_008766617
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZUL9 (UniProtKB/TrEMBL),   A0A8I6GLX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451089   ⟸   XM_017595600
- Peptide Label: isoform X4
- UniProtKB: A0A8I6GLX7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000052912   ⟸   ENSRNOT00000056060
RefSeq Acc Id: XP_038937188   ⟸   XM_039081260
- Peptide Label: isoform X9
- UniProtKB: A0A8I6GLX7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937187   ⟸   XM_039081259
- Peptide Label: isoform X7
- UniProtKB: A0A8I6GLX7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937189   ⟸   XM_039081261
- Peptide Label: isoform X10
- UniProtKB: A0A8I6GLX7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937199   ⟸   XM_039081271
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038937200   ⟸   XM_039081272
- Peptide Label: isoform X14
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937201   ⟸   XM_039081273
- Peptide Label: isoform X16
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937205   ⟸   XM_039081277
- Peptide Label: isoform X19
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937214   ⟸   XM_039081286
- Peptide Label: isoform X34
RefSeq Acc Id: XP_038937209   ⟸   XM_039081281
- Peptide Label: isoform X21
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937211   ⟸   XM_039081283
- Peptide Label: isoform X26
- UniProtKB: A0A8I6A6N0 (UniProtKB/TrEMBL),   A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937210   ⟸   XM_039081282
- Peptide Label: isoform X24
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937213   ⟸   XM_039081285
- Peptide Label: isoform X30
RefSeq Acc Id: XP_038937212   ⟸   XM_039081284
- Peptide Label: isoform X28
Ensembl Acc Id: ENSRNOP00000079352   ⟸   ENSRNOT00000119180
Ensembl Acc Id: ENSRNOP00000079448   ⟸   ENSRNOT00000100197
Ensembl Acc Id: ENSRNOP00000097137   ⟸   ENSRNOT00000109717
Ensembl Acc Id: ENSRNOP00000091298   ⟸   ENSRNOT00000099949
Ensembl Acc Id: ENSRNOP00000097455   ⟸   ENSRNOT00000112179
Ensembl Acc Id: ENSRNOP00000082163   ⟸   ENSRNOT00000108084
Ensembl Acc Id: ENSRNOP00000094297   ⟸   ENSRNOT00000108675
Ensembl Acc Id: ENSRNOP00000085249   ⟸   ENSRNOT00000114965
Ensembl Acc Id: ENSRNOP00000089166   ⟸   ENSRNOT00000097509
RefSeq Acc Id: NP_001382668   ⟸   NM_001395739
- Peptide Label: isoform 2
- UniProtKB: A0A8I5ZMY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121346   ⟸   XM_063265276
- Peptide Label: isoform X19
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121349   ⟸   XM_063265279
- Peptide Label: isoform X21
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121358   ⟸   XM_063265288
- Peptide Label: isoform X32
- UniProtKB: A0A8I5ZMY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121351   ⟸   XM_063265281
- Peptide Label: isoform X24
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121357   ⟸   XM_063265287
- Peptide Label: isoform X31
RefSeq Acc Id: XP_063121355   ⟸   XM_063265285
- Peptide Label: isoform X30
RefSeq Acc Id: XP_063121362   ⟸   XM_063265292
- Peptide Label: isoform X35
- UniProtKB: A0A8I5ZQP7 (UniProtKB/TrEMBL),   A0A8I5ZMY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121361   ⟸   XM_063265291
- Peptide Label: isoform X34
RefSeq Acc Id: XP_063121342   ⟸   XM_063265272
- Peptide Label: isoform X12
- UniProtKB: A0A8I6GLX7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121347   ⟸   XM_063265277
- Peptide Label: isoform X20
- UniProtKB: A0A8I5ZMY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121343   ⟸   XM_063265273
- Peptide Label: isoform X15
RefSeq Acc Id: XP_063121350   ⟸   XM_063265280
- Peptide Label: isoform X23
- UniProtKB: A0A8I5ZMY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121345   ⟸   XM_063265275
- Peptide Label: isoform X18
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121344   ⟸   XM_063265274
- Peptide Label: isoform X17
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121348   ⟸   XM_063265278
- Peptide Label: isoform X22
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121352   ⟸   XM_063265282
- Peptide Label: isoform X25
- UniProtKB: A0A8I6AJ95 (UniProtKB/TrEMBL),   A0A8I5ZMY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121354   ⟸   XM_063265284
- Peptide Label: isoform X29
- UniProtKB: A0A8I5ZMY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121353   ⟸   XM_063265283
- Peptide Label: isoform X27
- UniProtKB: A6I3J0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121356   ⟸   XM_063265286
- Peptide Label: isoform X31
RefSeq Acc Id: XP_063121366   ⟸   XM_063265296
- Peptide Label: isoform X39
RefSeq Acc Id: XP_063121365   ⟸   XM_063265295
- Peptide Label: isoform X38
RefSeq Acc Id: XP_063121360   ⟸   XM_063265290
- Peptide Label: isoform X33
RefSeq Acc Id: XP_063121363   ⟸   XM_063265293
- Peptide Label: isoform X36
RefSeq Acc Id: XP_063121364   ⟸   XM_063265294
- Peptide Label: isoform X37

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q4V7E8-F1-model_v2 AlphaFold Q4V7E8 1-437 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306234 AgrOrtholog
BioCyc Gene G2FUF-29024 BioCyc
Ensembl Genes ENSRNOG00000021047 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000056060.3 UniProtKB/Swiss-Prot
  ENSRNOT00000099949 ENTREZGENE
  ENSRNOT00000100197 ENTREZGENE
  ENSRNOT00000108084 ENTREZGENE
  ENSRNOT00000112179 ENTREZGENE
  ENSRNOT00000119180 ENTREZGENE
Gene3D-CATH 1.20.5.4090 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7456701 IMAGE-MGC_LOAD
InterPro LRRFIP1/2 UniProtKB/Swiss-Prot
KEGG Report rno:301035 UniProtKB/Swiss-Prot
MGC_CLONE MGC:116078 IMAGE-MGC_LOAD
NCBI Gene 301035 ENTREZGENE
PANTHER LEUCINE-RICH REPEAT FLIGHTLESS-INTERACTING PROTEIN 2 UniProtKB/Swiss-Prot
  PTHR19212 UniProtKB/Swiss-Prot
Pfam LRRFIP UniProtKB/Swiss-Prot
PhenoGen Lrrfip2 PhenoGen
RatGTEx ENSRNOG00000021047 RatGTEx
UniProt A0A8I5ZMY2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZQP7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZUL9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A2V6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A6N0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AE79_RAT UniProtKB/TrEMBL
  A0A8I6AJ95 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AUZ7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GLX7 ENTREZGENE, UniProtKB/TrEMBL
  A6I3J0 ENTREZGENE, UniProtKB/TrEMBL
  LRRF2_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-29 Lrrfip2  LRR binding FLII interacting protein 2  Lrrfip2  leucine rich repeat (in FLII) interacting protein 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Lrrfip2  leucine rich repeat (in FLII) interacting protein 2  Lrrfip2_predicted  leucine rich repeat (in FLII) interacting protein 2 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Lrrfip2_predicted  leucine rich repeat (in FLII) interacting protein 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED