LRRFIP2 (LRR binding FLII interacting protein 2) - Rat Genome Database

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Gene: LRRFIP2 (LRR binding FLII interacting protein 2) Homo sapiens
Analyze
Symbol: LRRFIP2
Name: LRR binding FLII interacting protein 2
RGD ID: 1314733
HGNC Page HGNC:6703
Description: Enables LRR domain binding activity. Predicted to be involved in Wnt signaling pathway and regulation of DNA-templated transcription. Predicted to act upstream of or within MyD88-dependent toll-like receptor 4 signaling pathway; MyD88-independent toll-like receptor signaling pathway; and positive regulation of tumor necrosis factor production.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: DKFZp434H2035; FLJ20248; FLJ22683; FLJ58304; HUFI-2; leucine rich repeat (in FLII) interacting protein 2; leucine-rich repeat flightless-interacting protein 2; LRR FLII-interacting protein 2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: LRRFIP2P1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38337,052,626 - 37,176,360 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl337,052,626 - 37,183,689 (-)EnsemblGRCh38hg38GRCh38
GRCh37337,094,117 - 37,217,851 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36337,069,502 - 37,191,086 (-)NCBINCBI36Build 36hg18NCBI36
Build 34337,069,502 - 37,191,086NCBI
Celera337,036,882 - 37,151,380 (-)NCBICelera
Cytogenetic Map3p22.2NCBI
HuRef337,034,886 - 37,159,241 (-)NCBIHuRef
CHM1_1337,045,747 - 37,169,490 (-)NCBICHM1_1
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
Additional References at PubMed
PMID:10366446   PMID:12477932   PMID:14702039   PMID:15489334   PMID:15677333   PMID:16344560   PMID:17081983   PMID:17110338   PMID:19265123   PMID:19322201   PMID:20360068   PMID:20379614  
PMID:21220426   PMID:21785361   PMID:23036196   PMID:23398456   PMID:23472066   PMID:23942110   PMID:25416956   PMID:25609649   PMID:25693804   PMID:25910212   PMID:26186194   PMID:26209609  
PMID:26344197   PMID:26496610   PMID:26618866   PMID:27431477   PMID:27545878   PMID:27684187   PMID:27872092   PMID:28103279   PMID:28186131   PMID:28514442   PMID:28712289   PMID:28902428  
PMID:29053956   PMID:29676528   PMID:29802200   PMID:30021884   PMID:30196744   PMID:30344098   PMID:30773093   PMID:30833792   PMID:30890647   PMID:30948266   PMID:31006538   PMID:31515488  
PMID:31586073   PMID:31871319   PMID:32614325   PMID:32994395   PMID:33024031   PMID:33060197   PMID:33144569   PMID:33194618   PMID:33644029   PMID:33729478   PMID:33762435   PMID:33961781  
PMID:34079125   PMID:34315543   PMID:34537242   PMID:34687317   PMID:34709727   PMID:35013218   PMID:35256949   PMID:35271311   PMID:35676659   PMID:35831314   PMID:35850772   PMID:35906200  
PMID:35944360   PMID:36215168   PMID:36244648   PMID:36380368   PMID:36490346   PMID:36526897   PMID:36574265  


Genomics

Comparative Map Data
LRRFIP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38337,052,626 - 37,176,360 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl337,052,626 - 37,183,689 (-)EnsemblGRCh38hg38GRCh38
GRCh37337,094,117 - 37,217,851 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36337,069,502 - 37,191,086 (-)NCBINCBI36Build 36hg18NCBI36
Build 34337,069,502 - 37,191,086NCBI
Celera337,036,882 - 37,151,380 (-)NCBICelera
Cytogenetic Map3p22.2NCBI
HuRef337,034,886 - 37,159,241 (-)NCBIHuRef
CHM1_1337,045,747 - 37,169,490 (-)NCBICHM1_1
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBIT2T-CHM13v2.0
Lrrfip2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399110,946,614 - 111,054,736 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9110,946,660 - 111,054,736 (+)EnsemblGRCm39 Ensembl
GRCm389111,117,546 - 111,225,668 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9111,117,592 - 111,225,668 (+)EnsemblGRCm38mm10GRCm38
MGSCv379111,020,615 - 111,128,172 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369110,962,948 - 111,070,839 (+)NCBIMGSCv36mm8
Celera9110,842,030 - 110,948,747 (+)NCBICelera
Cytogenetic Map9F3NCBI
cM Map960.92NCBI
Lrrfip2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88119,969,908 - 120,071,270 (+)NCBIGRCr8
mRatBN7.28111,091,453 - 111,193,947 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8111,091,503 - 111,193,255 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8116,705,921 - 116,808,610 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08114,905,144 - 115,007,841 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08112,747,970 - 112,850,663 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08119,381,666 - 119,484,125 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8119,382,011 - 119,483,043 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08118,722,753 - 118,825,642 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48115,509,800 - 115,612,552 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18115,576,635 - 115,632,006 (+)NCBI
Celera8110,373,666 - 110,474,463 (+)NCBICelera
Cytogenetic Map8q32NCBI
Lrrfip2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554213,938,054 - 4,066,060 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554213,938,054 - 4,066,701 (-)NCBIChiLan1.0ChiLan1.0
LRRFIP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2237,014,695 - 37,147,721 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1337,019,460 - 37,143,497 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0336,959,065 - 37,082,971 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1337,248,015 - 37,371,624 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl337,248,015 - 37,371,448 (-)Ensemblpanpan1.1panPan2
LRRFIP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1236,939,476 - 7,047,721 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl236,940,318 - 7,047,610 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha236,979,420 - 7,087,706 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0237,225,350 - 7,333,675 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl237,224,044 - 7,332,685 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1237,044,952 - 7,153,058 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0237,187,174 - 7,294,999 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0237,177,374 - 7,285,698 (-)NCBIUU_Cfam_GSD_1.0
Lrrfip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118193,464,158 - 193,553,883 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647326,602,324 - 26,692,285 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647326,602,373 - 26,692,507 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LRRFIP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1321,670,424 - 21,793,043 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11321,666,896 - 21,790,352 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21323,693,692 - 23,766,073 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LRRFIP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1152,231,423 - 2,362,394 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl152,231,525 - 2,361,544 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606310,967,767 - 11,099,245 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lrrfip2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478815,158,920 - 15,294,785 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in LRRFIP2
33 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 3p26.3-22.2(chr3:52266-37148076)x3 copy number gain See cases [RCV000051097] Chr3:52266..37148076 [GRCh38]
Chr3:93949..37189567 [GRCh37]
Chr3:68949..37164571 [NCBI36]
Chr3:3p26.3-22.2
pathogenic
GRCh38/hg38 3p25.3-22.2(chr3:11463328-38919543)x3 copy number gain See cases [RCV000051720] Chr3:11463328..38919543 [GRCh38]
Chr3:11504802..38961034 [GRCh37]
Chr3:11479802..38936038 [NCBI36]
Chr3:3p25.3-22.2
pathogenic
NM_006309.4(LRRFIP2):c.*272G>A single nucleotide variant Lynch syndrome [RCV000075054] Chr3:37053579 [GRCh38]
Chr3:37095070 [GRCh37]
Chr3:3p22.2
benign
NM_006309.4(LRRFIP2):c.90+1G>C single nucleotide variant not provided [RCV000122527] Chr3:37148893 [GRCh38]
Chr3:37190384 [GRCh37]
Chr3:3p22.2
uncertain significance
GRCh38/hg38 3p22.3-22.1(chr3:33728406-40662451)x3 copy number gain See cases [RCV000134924] Chr3:33728406..40662451 [GRCh38]
Chr3:33769898..40703942 [GRCh37]
Chr3:33744902..40678946 [NCBI36]
Chr3:3p22.3-22.1
pathogenic
GRCh38/hg38 3p26.3-22.1(chr3:53308-41381521)x3 copy number gain See cases [RCV000141810] Chr3:53308..41381521 [GRCh38]
Chr3:94991..41423012 [GRCh37]
Chr3:69991..41398016 [NCBI36]
Chr3:3p26.3-22.1
pathogenic
GRCh38/hg38 3p22.2(chr3:36935294-37058124)x3 copy number gain See cases [RCV000142758] Chr3:36935294..37058124 [GRCh38]
Chr3:36976785..37099615 [GRCh37]
Chr3:36951789..37074619 [NCBI36]
Chr3:3p22.2
benign
GRCh37/hg19 3p22.2-21.31(chr3:37028313-49929220)x3 copy number gain See cases [RCV000240519] Chr3:37028313..49929220 [GRCh37]
Chr3:3p22.2-21.31
likely pathogenic
GRCh37/hg19 3p26.3-22.2(chr3:61891-37459464)x3 copy number gain See cases [RCV000511463] Chr3:61891..37459464 [GRCh37]
Chr3:3p26.3-22.2
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 copy number gain See cases [RCV000511055] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) copy number gain See cases [RCV000512358] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p24.3-21.31(chr3:16923595-45249923)x2,3 copy number gain not provided [RCV000682249] Chr3:16923595..45249923 [GRCh37]
Chr3:3p24.3-21.31
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 copy number gain not provided [RCV000742133] Chr3:60174..197948027 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 copy number gain not provided [RCV000742138] Chr3:61495..197838262 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p22.2(chr3:37089011-37116538) copy number loss Muir-Torré syndrome [RCV000767702] Chr3:37089011..37116538 [GRCh37]
Chr3:3p22.2
pathogenic
GRCh37/hg19 3p22.2(chr3:36948416-37788630)x3 copy number gain not provided [RCV001005424] Chr3:36948416..37788630 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.2161C>G (p.Gln721Glu) single nucleotide variant not specified [RCV004315994] Chr3:37053856 [GRCh38]
Chr3:37095347 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1792T>G (p.Cys598Gly) single nucleotide variant not provided [RCV000974973] Chr3:37058868 [GRCh38]
Chr3:37100359 [GRCh37]
Chr3:3p22.2
benign
NM_006309.4(LRRFIP2):c.866T>C (p.Leu289Ser) single nucleotide variant not provided [RCV000956079] Chr3:37102931 [GRCh38]
Chr3:37144422 [GRCh37]
Chr3:3p22.2
benign
NC_000003.12:g.(?_37034840)_(37070424_37081676)del deletion Hereditary nonpolyposis colon cancer [RCV001254842] Chr3:37034840..37070424 [GRCh38]
Chr3:3p22.2
pathogenic
NC_000003.12:g.(37083823_37089009)_(37092338_?)del deletion Hereditary nonpolyposis colon cancer [RCV001254841] Chr3:37089009..37092338 [GRCh38]
Chr3:3p22.2
pathogenic
NC_000003.11:g.37089454_37101079del deletion Colorectal cancer, hereditary nonpolyposis, type 2 [RCV000022503] Chr3:37047963..37059588 [GRCh38]
Chr3:37089454..37101079 [GRCh37]
Chr3:3p22.2
pathogenic
NC_000003.11:g.(?_37092052)_(37100470_?)del deletion Hereditary nonpolyposis colorectal neoplasms [RCV001947086] Chr3:37092052..37100470 [GRCh37]
Chr3:3p22.2
pathogenic
NC_000003.11:g.(?_16710965)_(41275270_?)del deletion not provided [RCV001958625] Chr3:16710965..41275270 [GRCh37]
Chr3:3p24.3-22.1
pathogenic
NC_000003.11:g.(?_37034542)_(38835501_?)dup duplication Heterotaxy, visceral, 4, autosomal [RCV001900394] Chr3:37034542..38835501 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1799G>A (p.Arg600Lys) single nucleotide variant not specified [RCV004306520] Chr3:37058861 [GRCh38]
Chr3:37100352 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.196G>C (p.Asp66His) single nucleotide variant not specified [RCV004156836] Chr3:37127662 [GRCh38]
Chr3:37169153 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.712G>A (p.Gly238Arg) single nucleotide variant not specified [RCV004080809] Chr3:37108075 [GRCh38]
Chr3:37149566 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.195T>G (p.Phe65Leu) single nucleotide variant not specified [RCV004104303] Chr3:37127663 [GRCh38]
Chr3:37169154 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1643C>G (p.Thr548Ser) single nucleotide variant not specified [RCV004115522] Chr3:37065866 [GRCh38]
Chr3:37107357 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1930A>G (p.Ile644Val) single nucleotide variant not specified [RCV004184547] Chr3:37055106 [GRCh38]
Chr3:37096597 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.392C>G (p.Ser131Cys) single nucleotide variant not specified [RCV004130127] Chr3:37112961 [GRCh38]
Chr3:37154452 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.623A>G (p.Asn208Ser) single nucleotide variant not specified [RCV004227264] Chr3:37108671 [GRCh38]
Chr3:37150162 [GRCh37]
Chr3:3p22.2
likely benign
NM_006309.4(LRRFIP2):c.407A>C (p.Lys136Thr) single nucleotide variant not specified [RCV004131816] Chr3:37112946 [GRCh38]
Chr3:37154437 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.2117G>A (p.Arg706Gln) single nucleotide variant not specified [RCV004225925] Chr3:37053900 [GRCh38]
Chr3:37095391 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1784G>A (p.Arg595Gln) single nucleotide variant not specified [RCV004219850] Chr3:37058876 [GRCh38]
Chr3:37100367 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.749C>G (p.Ser250Cys) single nucleotide variant not specified [RCV004080075] Chr3:37105489 [GRCh38]
Chr3:37146980 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.256C>T (p.His86Tyr) single nucleotide variant not specified [RCV004206356] Chr3:37121664 [GRCh38]
Chr3:37163155 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1034G>A (p.Arg345Gln) single nucleotide variant not specified [RCV004225405] Chr3:37094793 [GRCh38]
Chr3:37136284 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1484A>G (p.Glu495Gly) single nucleotide variant not specified [RCV004229164] Chr3:37066306 [GRCh38]
Chr3:37107797 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1069G>A (p.Val357Ile) single nucleotide variant not specified [RCV004125776] Chr3:37091505 [GRCh38]
Chr3:37132996 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1958G>A (p.Arg653Gln) single nucleotide variant not specified [RCV004189110] Chr3:37054508 [GRCh38]
Chr3:37095999 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.215T>C (p.Ile72Thr) single nucleotide variant not specified [RCV004085027] Chr3:37127643 [GRCh38]
Chr3:37169134 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.701G>A (p.Arg234Gln) single nucleotide variant not specified [RCV004289712] Chr3:37108086 [GRCh38]
Chr3:37149577 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.697G>T (p.Ala233Ser) single nucleotide variant not specified [RCV004301147] Chr3:37108090 [GRCh38]
Chr3:37149581 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.913A>C (p.Thr305Pro) single nucleotide variant not specified [RCV004279447] Chr3:37096621 [GRCh38]
Chr3:37138112 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.274C>T (p.Arg92Cys) single nucleotide variant not specified [RCV004286843] Chr3:37121646 [GRCh38]
Chr3:37163137 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.319G>C (p.Gly107Arg) single nucleotide variant not specified [RCV004279560] Chr3:37121503 [GRCh38]
Chr3:37162994 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.263C>T (p.Ser88Phe) single nucleotide variant not specified [RCV004269696] Chr3:37121657 [GRCh38]
Chr3:37163148 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.796G>T (p.Asp266Tyr) single nucleotide variant not specified [RCV004307198] Chr3:37103001 [GRCh38]
Chr3:37144492 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1066G>A (p.Asp356Asn) single nucleotide variant not specified [RCV004274080] Chr3:37091508 [GRCh38]
Chr3:37132999 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1800G>T (p.Arg600Ser) single nucleotide variant not specified [RCV004306521] Chr3:37058860 [GRCh38]
Chr3:37100351 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.547A>G (p.Thr183Ala) single nucleotide variant not specified [RCV004347167] Chr3:37109670 [GRCh38]
Chr3:37151161 [GRCh37]
Chr3:3p22.2
uncertain significance
GRCh37/hg19 3p22.3-22.2(chr3:35970901-37455657)x3 copy number gain not specified [RCV003986423] Chr3:35970901..37455657 [GRCh37]
Chr3:3p22.3-22.2
uncertain significance
GRCh37/hg19 3p22.3-22.2(chr3:35969734-37443324)x3 copy number gain not specified [RCV003986476] Chr3:35969734..37443324 [GRCh37]
Chr3:3p22.3-22.2
uncertain significance
NM_006309.4(LRRFIP2):c.1604A>G (p.Asn535Ser) single nucleotide variant not specified [RCV004407914] Chr3:37065905 [GRCh38]
Chr3:37107396 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.236C>T (p.Ser79Leu) single nucleotide variant not specified [RCV004407915] Chr3:37121684 [GRCh38]
Chr3:37163175 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.453T>G (p.Phe151Leu) single nucleotide variant not specified [RCV004407917] Chr3:37111051 [GRCh38]
Chr3:37152542 [GRCh37]
Chr3:3p22.2
uncertain significance
NM_006309.4(LRRFIP2):c.770G>A (p.Arg257Gln) single nucleotide variant not specified [RCV004407918] Chr3:37105468 [GRCh38]
Chr3:37146959 [GRCh37]
Chr3:3p22.2
likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3560
Count of miRNA genes:1015
Interacting mature miRNAs:1217
Transcripts:ENST00000336686, ENST00000354379, ENST00000396428, ENST00000416425, ENST00000421276, ENST00000421307, ENST00000434749, ENST00000436858, ENST00000438374, ENST00000440230, ENST00000440742, ENST00000452742, ENST00000460646, ENST00000461672, ENST00000481682, ENST00000482466, ENST00000483306, ENST00000487246, ENST00000490597, ENST00000496479, ENST00000496825
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
WI-19620  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37337,094,498 - 37,094,724UniSTSGRCh37
Build 36337,069,502 - 37,069,728RGDNCBI36
Celera337,037,263 - 37,037,489RGD
Cytogenetic Map3p22.2UniSTS
HuRef337,035,264 - 37,035,490UniSTS
TNG Radiation Hybrid Map323207.0UniSTS
GeneMap99-GB4 RH Map3128.92UniSTS
Whitehead-RH Map3140.5UniSTS
NCBI RH Map3342.2UniSTS
G54146  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37337,094,592 - 37,094,724UniSTSGRCh37
Build 36337,069,596 - 37,069,728RGDNCBI36
Celera337,037,357 - 37,037,489RGD
Cytogenetic Map3p22.2UniSTS
HuRef337,035,358 - 37,035,490UniSTS
RH125441  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37205,273,141 - 5,273,364UniSTSGRCh37
GRCh37337,176,261 - 37,176,487UniSTSGRCh37
Build 36337,151,265 - 37,151,491RGDNCBI36
Celera337,119,336 - 37,119,562RGD
Celera205,343,171 - 5,343,394UniSTS
HuRef205,228,813 - 5,229,036UniSTS
HuRef337,117,582 - 37,117,808UniSTS
RH16680  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37337,213,736 - 37,213,901UniSTSGRCh37
Build 36337,188,740 - 37,188,905RGDNCBI36
Celera337,147,265 - 37,147,430RGD
Cytogenetic Map3p22.2UniSTS
HuRef337,155,059 - 37,155,224UniSTS
GeneMap99-GB4 RH Map3120.62UniSTS
LRRFIP2_8913  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37337,094,445 - 37,095,264UniSTSGRCh37
Build 36337,069,449 - 37,070,268RGDNCBI36
Celera337,037,210 - 37,038,029RGD
HuRef337,035,211 - 37,036,030UniSTS
STS-W88502  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37337,146,508 - 37,146,656UniSTSGRCh37
Build 36337,121,512 - 37,121,660RGDNCBI36
Celera337,089,586 - 37,089,734RGD
Cytogenetic Map3p22.2UniSTS
HuRef337,087,628 - 37,087,776UniSTS
TNG Radiation Hybrid Map323167.0UniSTS
GeneMap99-GB4 RH Map3125.67UniSTS
D3S4239  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37337,189,424 - 37,189,566UniSTSGRCh37
Build 36337,164,428 - 37,164,570RGDNCBI36
Celera337,122,954 - 37,123,096RGD
Cytogenetic Map3p22.2UniSTS
HuRef337,130,744 - 37,130,886UniSTS
Stanford-G3 RH Map31674.0UniSTS
NCBI RH Map3354.1UniSTS
GeneMap99-G3 RH Map31572.0UniSTS
STS-N68834  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37337,184,149 - 37,184,286UniSTSGRCh37
Build 36337,159,153 - 37,159,290RGDNCBI36
Celera375,601,425 - 75,601,562RGD
Cytogenetic Map3p22.2UniSTS
HuRef337,125,469 - 37,125,606UniSTS
GeneMap99-GB4 RH Map3121.68UniSTS
RH66486  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37337,094,577 - 37,094,724UniSTSGRCh37
Build 36337,069,581 - 37,069,728RGDNCBI36
Celera337,037,342 - 37,037,489RGD
Cytogenetic Map3p22.2UniSTS
HuRef337,035,343 - 37,035,490UniSTS
GeneMap99-GB4 RH Map3128.92UniSTS
NCBI RH Map3342.2UniSTS
RH66477  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37337,184,160 - 37,184,289UniSTSGRCh37
Build 36337,159,164 - 37,159,293RGDNCBI36
Celera375,601,436 - 75,601,565RGD
Cytogenetic Map3p22.2UniSTS
HuRef337,125,480 - 37,125,609UniSTS
GeneMap99-GB4 RH Map3125.06UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2333 2482 1522 454 1425 308 4243 2102 2974 245 1392 1506 160 1146 2786 3
Low 106 509 204 170 526 157 114 95 760 174 68 107 15 1 58 2 3 2
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_053016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001134369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001282691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001348311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_017724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_145514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005265539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005265540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005265551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011534217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011534218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011534219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011534222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011534229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001740363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC006583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC126118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF115509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK000255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK024692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK026336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK124432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK302282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX648794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR749705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB033703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC336346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KX533489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  R27776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000336686   ⟹   ENSP00000338727
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,052,626 - 37,174,582 (-)Ensembl
RefSeq Acc Id: ENST00000354379   ⟹   ENSP00000346349
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,052,656 - 37,176,360 (-)Ensembl
RefSeq Acc Id: ENST00000396428   ⟹   ENSP00000379705
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,053,721 - 37,175,189 (-)Ensembl
RefSeq Acc Id: ENST00000416425   ⟹   ENSP00000409574
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,075,024 - 37,176,532 (-)Ensembl
RefSeq Acc Id: ENST00000421276   ⟹   ENSP00000416364
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,053,004 - 37,176,337 (-)Ensembl
RefSeq Acc Id: ENST00000434749   ⟹   ENSP00000416907
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,129,063 - 37,175,135 (-)Ensembl
RefSeq Acc Id: ENST00000436858   ⟹   ENSP00000416013
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,129,063 - 37,175,209 (-)Ensembl
RefSeq Acc Id: ENST00000438374   ⟹   ENSP00000412206
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,121,666 - 37,176,251 (-)Ensembl
RefSeq Acc Id: ENST00000440230   ⟹   ENSP00000405480
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,053,750 - 37,176,308 (-)Ensembl
RefSeq Acc Id: ENST00000440742   ⟹   ENSP00000413026
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,058,859 - 37,083,750 (-)Ensembl
RefSeq Acc Id: ENST00000452742   ⟹   ENSP00000391360
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,129,063 - 37,175,215 (-)Ensembl
RefSeq Acc Id: ENST00000460646
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,053,004 - 37,065,334 (-)Ensembl
RefSeq Acc Id: ENST00000461672
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,121,464 - 37,183,689 (-)Ensembl
RefSeq Acc Id: ENST00000481682
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,083,645 - 37,111,915 (-)Ensembl
RefSeq Acc Id: ENST00000482466
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,148,927 - 37,176,057 (-)Ensembl
RefSeq Acc Id: ENST00000483306
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,174,119 - 37,176,327 (-)Ensembl
RefSeq Acc Id: ENST00000487246
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,063,742 - 37,066,684 (-)Ensembl
RefSeq Acc Id: ENST00000490597
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,170,333 - 37,176,302 (-)Ensembl
RefSeq Acc Id: ENST00000496479
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,053,687 - 37,068,763 (-)Ensembl
RefSeq Acc Id: ENST00000496825
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl337,172,770 - 37,176,144 (-)Ensembl
RefSeq Acc Id: NM_001134369   ⟹   NP_001127841
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
GRCh37337,094,117 - 37,217,992 (-)NCBI
Celera337,036,882 - 37,151,380 (-)RGD
HuRef337,034,886 - 37,159,241 (-)ENTREZGENE
CHM1_1337,045,747 - 37,169,490 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001282691   ⟹   NP_001269620
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,175,215 (-)NCBI
HuRef337,034,886 - 37,159,241 (-)NCBI
CHM1_1337,045,747 - 37,168,345 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,176,558 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348297   ⟹   NP_001335226
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348298   ⟹   NP_001335227
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348299   ⟹   NP_001335228
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348300   ⟹   NP_001335229
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348301   ⟹   NP_001335230
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348302   ⟹   NP_001335231
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348303   ⟹   NP_001335232
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348304   ⟹   NP_001335233
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348305   ⟹   NP_001335234
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348306   ⟹   NP_001335235
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348307   ⟹   NP_001335236
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,174,890 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,176,233 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348308   ⟹   NP_001335237
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348309   ⟹   NP_001335238
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348310   ⟹   NP_001335239
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001348311   ⟹   NP_001335240
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NM_006309   ⟹   NP_006300
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,174,582 (-)NCBI
GRCh37337,094,117 - 37,217,992 (-)NCBI
Build 36337,070,181 - 37,165,533 (-)NCBI Archive
Celera337,036,882 - 37,151,380 (-)RGD
HuRef337,034,886 - 37,159,241 (-)ENTREZGENE
CHM1_1337,045,747 - 37,167,735 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,175,925 (-)NCBI
Sequence:
RefSeq Acc Id: NM_017724   ⟹   NP_060194
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
GRCh37337,094,117 - 37,217,992 (-)NCBI
Build 36337,069,502 - 37,191,086 (-)NCBI Archive
Celera337,036,882 - 37,151,380 (-)RGD
HuRef337,034,886 - 37,159,241 (-)ENTREZGENE
CHM1_1337,045,747 - 37,169,490 (-)NCBI
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Sequence:
RefSeq Acc Id: NR_145514
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,172,791 - 37,176,327 (-)NCBI
T2T-CHM13v2.0337,174,134 - 37,177,670 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005265539   ⟹   XP_005265596
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005265540   ⟹   XP_005265597
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
GRCh37337,094,117 - 37,217,992 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005265551   ⟹   XP_005265608
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
GRCh37337,094,117 - 37,217,992 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713385   ⟹   XP_006713448
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713387   ⟹   XP_006713450
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713388   ⟹   XP_006713451
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713389   ⟹   XP_006713452
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713390   ⟹   XP_006713453
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713392   ⟹   XP_006713455
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713393   ⟹   XP_006713456
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713395   ⟹   XP_006713458
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713396   ⟹   XP_006713459
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713397   ⟹   XP_006713460
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011534217   ⟹   XP_011532519
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011534218   ⟹   XP_011532520
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011534219   ⟹   XP_011532521
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011534222   ⟹   XP_011532524
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007467   ⟹   XP_016862956
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007469   ⟹   XP_016862958
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007471   ⟹   XP_016862960
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007472   ⟹   XP_016862961
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007473   ⟹   XP_016862962
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007476   ⟹   XP_016862965
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007479   ⟹   XP_016862968
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024453820   ⟹   XP_024309588
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024453821   ⟹   XP_024309589
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024453824   ⟹   XP_024309592
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024453826   ⟹   XP_024309594
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047449201   ⟹   XP_047305157
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
RefSeq Acc Id: XM_047449202   ⟹   XP_047305158
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
RefSeq Acc Id: XM_047449203   ⟹   XP_047305159
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
RefSeq Acc Id: XM_047449204   ⟹   XP_047305160
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
RefSeq Acc Id: XM_047449205   ⟹   XP_047305161
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
RefSeq Acc Id: XM_047449206   ⟹   XP_047305162
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
RefSeq Acc Id: XM_047449207   ⟹   XP_047305163
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
RefSeq Acc Id: XM_047449208   ⟹   XP_047305164
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,052,626 - 37,176,360 (-)NCBI
RefSeq Acc Id: XM_054348375   ⟹   XP_054204350
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348376   ⟹   XP_054204351
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348377   ⟹   XP_054204352
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348378   ⟹   XP_054204353
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348379   ⟹   XP_054204354
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348380   ⟹   XP_054204355
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348381   ⟹   XP_054204356
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348382   ⟹   XP_054204357
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348383   ⟹   XP_054204358
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348384   ⟹   XP_054204359
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348385   ⟹   XP_054204360
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348386   ⟹   XP_054204361
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348387   ⟹   XP_054204362
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348388   ⟹   XP_054204363
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348389   ⟹   XP_054204364
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348390   ⟹   XP_054204365
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348391   ⟹   XP_054204366
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348392   ⟹   XP_054204367
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348393   ⟹   XP_054204368
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348394   ⟹   XP_054204369
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348395   ⟹   XP_054204370
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348396   ⟹   XP_054204371
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348397   ⟹   XP_054204372
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348398   ⟹   XP_054204373
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348399   ⟹   XP_054204374
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348400   ⟹   XP_054204375
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348401   ⟹   XP_054204376
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348402   ⟹   XP_054204377
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348403   ⟹   XP_054204378
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348404   ⟹   XP_054204379
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348405   ⟹   XP_054204380
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348406   ⟹   XP_054204381
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348407   ⟹   XP_054204382
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348408   ⟹   XP_054204383
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348409   ⟹   XP_054204384
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
RefSeq Acc Id: XM_054348410   ⟹   XP_054204385
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0337,053,969 - 37,177,703 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001127841 (Get FASTA)   NCBI Sequence Viewer  
  NP_001269620 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335226 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335227 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335228 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335229 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335230 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335231 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335232 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335233 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335234 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335235 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335236 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335237 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335238 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335239 (Get FASTA)   NCBI Sequence Viewer  
  NP_001335240 (Get FASTA)   NCBI Sequence Viewer  
  NP_006300 (Get FASTA)   NCBI Sequence Viewer  
  NP_060194 (Get FASTA)   NCBI Sequence Viewer  
  XP_005265596 (Get FASTA)   NCBI Sequence Viewer  
  XP_005265597 (Get FASTA)   NCBI Sequence Viewer  
  XP_005265608 (Get FASTA)   NCBI Sequence Viewer  
  XP_006713448 (Get FASTA)   NCBI Sequence Viewer  
  XP_006713450 (Get FASTA)   NCBI Sequence Viewer  
  XP_006713451 (Get FASTA)   NCBI Sequence Viewer  
  XP_006713452 (Get FASTA)   NCBI Sequence Viewer  
  XP_006713453 (Get FASTA)   NCBI Sequence Viewer  
  XP_006713455 (Get FASTA)   NCBI Sequence Viewer  
  XP_006713456 (Get FASTA)   NCBI Sequence Viewer  
  XP_006713458 (Get FASTA)   NCBI Sequence Viewer  
  XP_006713459 (Get FASTA)   NCBI Sequence Viewer  
  XP_006713460 (Get FASTA)   NCBI Sequence Viewer  
  XP_011532519 (Get FASTA)   NCBI Sequence Viewer  
  XP_011532520 (Get FASTA)   NCBI Sequence Viewer  
  XP_011532521 (Get FASTA)   NCBI Sequence Viewer  
  XP_011532524 (Get FASTA)   NCBI Sequence Viewer  
  XP_016862956 (Get FASTA)   NCBI Sequence Viewer  
  XP_016862958 (Get FASTA)   NCBI Sequence Viewer  
  XP_016862960 (Get FASTA)   NCBI Sequence Viewer  
  XP_016862961 (Get FASTA)   NCBI Sequence Viewer  
  XP_016862962 (Get FASTA)   NCBI Sequence Viewer  
  XP_016862965 (Get FASTA)   NCBI Sequence Viewer  
  XP_016862968 (Get FASTA)   NCBI Sequence Viewer  
  XP_024309588 (Get FASTA)   NCBI Sequence Viewer  
  XP_024309589 (Get FASTA)   NCBI Sequence Viewer  
  XP_024309592 (Get FASTA)   NCBI Sequence Viewer  
  XP_024309594 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305157 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305158 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305159 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305160 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305161 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305162 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305163 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305164 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204350 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204351 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204352 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204353 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204354 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204355 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204356 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204357 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204358 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204359 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204360 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204361 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204362 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204363 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204364 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204365 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204366 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204367 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204368 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204369 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204370 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204371 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204372 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204373 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204374 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204375 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204376 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204377 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204378 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204379 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204380 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204381 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204382 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204383 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204384 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204385 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD41257 (Get FASTA)   NCBI Sequence Viewer  
  AAH53668 (Get FASTA)   NCBI Sequence Viewer  
  AQN67642 (Get FASTA)   NCBI Sequence Viewer  
  BAA91035 (Get FASTA)   NCBI Sequence Viewer  
  BAF84203 (Get FASTA)   NCBI Sequence Viewer  
  BAG63625 (Get FASTA)   NCBI Sequence Viewer  
  CAH18481 (Get FASTA)   NCBI Sequence Viewer  
  EAW64486 (Get FASTA)   NCBI Sequence Viewer  
  EAW64487 (Get FASTA)   NCBI Sequence Viewer  
  EAW64488 (Get FASTA)   NCBI Sequence Viewer  
  EAW64489 (Get FASTA)   NCBI Sequence Viewer  
  EAW64490 (Get FASTA)   NCBI Sequence Viewer  
  EAW64491 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000338727
  ENSP00000338727.4
  ENSP00000346349
  ENSP00000346349.4
  ENSP00000379705
  ENSP00000379705.2
  ENSP00000391360.1
  ENSP00000405480
  ENSP00000405480.1
  ENSP00000409574.1
  ENSP00000412206.1
  ENSP00000413026.2
  ENSP00000416013.1
  ENSP00000416364
  ENSP00000416364.2
  ENSP00000416907.1
GenBank Protein Q9Y608 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_060194   ⟸   NM_017724
- Peptide Label: isoform l
- UniProtKB: Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001127841   ⟸   NM_001134369
- Peptide Label: isoform k
- UniProtKB: Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_006300   ⟸   NM_006309
- Peptide Label: isoform a
- UniProtKB: Q68CV3 (UniProtKB/Swiss-Prot),   B4DY63 (UniProtKB/Swiss-Prot),   A8MXR0 (UniProtKB/Swiss-Prot),   A8K649 (UniProtKB/Swiss-Prot),   Q9NXH5 (UniProtKB/Swiss-Prot),   Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005265596   ⟸   XM_005265539
- Peptide Label: isoform X1
- UniProtKB: Q68CV3 (UniProtKB/Swiss-Prot),   B4DY63 (UniProtKB/Swiss-Prot),   A8MXR0 (UniProtKB/Swiss-Prot),   A8K649 (UniProtKB/Swiss-Prot),   Q9NXH5 (UniProtKB/Swiss-Prot),   Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005265608   ⟸   XM_005265551
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_005265597   ⟸   XM_005265540
- Peptide Label: isoform X1
- UniProtKB: Q68CV3 (UniProtKB/Swiss-Prot),   B4DY63 (UniProtKB/Swiss-Prot),   A8MXR0 (UniProtKB/Swiss-Prot),   A8K649 (UniProtKB/Swiss-Prot),   Q9NXH5 (UniProtKB/Swiss-Prot),   Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001269620   ⟸   NM_001282691
- Peptide Label: isoform d
- UniProtKB: Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006713459   ⟸   XM_006713396
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_006713452   ⟸   XM_006713389
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006713451   ⟸   XM_006713388
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006713448   ⟸   XM_006713385
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006713450   ⟸   XM_006713387
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006713460   ⟸   XM_006713397
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_006713456   ⟸   XM_006713393
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006713455   ⟸   XM_006713392
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006713458   ⟸   XM_006713395
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006713453   ⟸   XM_006713390
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_011532524   ⟸   XM_011534222
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_011532519   ⟸   XM_011534217
- Peptide Label: isoform X1
- UniProtKB: Q68CV3 (UniProtKB/Swiss-Prot),   B4DY63 (UniProtKB/Swiss-Prot),   A8MXR0 (UniProtKB/Swiss-Prot),   A8K649 (UniProtKB/Swiss-Prot),   Q9NXH5 (UniProtKB/Swiss-Prot),   Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011532520   ⟸   XM_011534218
- Peptide Label: isoform X1
- UniProtKB: Q68CV3 (UniProtKB/Swiss-Prot),   B4DY63 (UniProtKB/Swiss-Prot),   A8MXR0 (UniProtKB/Swiss-Prot),   A8K649 (UniProtKB/Swiss-Prot),   Q9NXH5 (UniProtKB/Swiss-Prot),   Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011532521   ⟸   XM_011534219
- Peptide Label: isoform X1
- UniProtKB: Q68CV3 (UniProtKB/Swiss-Prot),   B4DY63 (UniProtKB/Swiss-Prot),   A8MXR0 (UniProtKB/Swiss-Prot),   A8K649 (UniProtKB/Swiss-Prot),   Q9NXH5 (UniProtKB/Swiss-Prot),   Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016862962   ⟸   XM_017007473
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_016862968   ⟸   XM_017007479
- Peptide Label: isoform X24
- Sequence:
RefSeq Acc Id: XP_016862960   ⟸   XM_017007471
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_016862961   ⟸   XM_017007472
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: XP_016862958   ⟸   XM_017007469
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_016862956   ⟸   XM_017007467
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_016862965   ⟸   XM_017007476
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: NP_001335237   ⟸   NM_001348308
- Peptide Label: isoform j
- Sequence:
RefSeq Acc Id: NP_001335233   ⟸   NM_001348304
- Peptide Label: isoform h
- Sequence:
RefSeq Acc Id: NP_001335234   ⟸   NM_001348305
- Peptide Label: isoform i
- Sequence:
RefSeq Acc Id: NP_001335230   ⟸   NM_001348301
- Peptide Label: isoform f
- Sequence:
RefSeq Acc Id: NP_001335228   ⟸   NM_001348299
- Peptide Label: isoform e
- Sequence:
RefSeq Acc Id: NP_001335226   ⟸   NM_001348297
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_001335227   ⟸   NM_001348298
- Peptide Label: isoform c
- Sequence:
RefSeq Acc Id: NP_001335240   ⟸   NM_001348311
- Peptide Label: isoform l
- UniProtKB: Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001335238   ⟸   NM_001348309
- Peptide Label: isoform j
- Sequence:
RefSeq Acc Id: NP_001335239   ⟸   NM_001348310
- Peptide Label: isoform k
- UniProtKB: Q9Y608 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001335235   ⟸   NM_001348306
- Peptide Label: isoform i
- Sequence:
RefSeq Acc Id: NP_001335231   ⟸   NM_001348302
- Peptide Label: isoform f
- Sequence:
RefSeq Acc Id: NP_001335232   ⟸   NM_001348303
- Peptide Label: isoform g
- Sequence:
RefSeq Acc Id: NP_001335229   ⟸   NM_001348300
- Peptide Label: isoform e
- Sequence:
RefSeq Acc Id: NP_001335236   ⟸   NM_001348307
- Peptide Label: isoform i
- Sequence:
RefSeq Acc Id: XP_024309592   ⟸   XM_024453824
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_024309589   ⟸   XM_024453821
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_024309588   ⟸   XM_024453820
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_024309594   ⟸   XM_024453826
- Peptide Label: isoform X25
- UniProtKB: A0A1S5UZ17 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000412206   ⟸   ENST00000438374
RefSeq Acc Id: ENSP00000391360   ⟸   ENST00000452742
RefSeq Acc Id: ENSP00000338727   ⟸   ENST00000336686
RefSeq Acc Id: ENSP00000413026   ⟸   ENST00000440742
RefSeq Acc Id: ENSP00000405480   ⟸   ENST00000440230
RefSeq Acc Id: ENSP00000409574   ⟸   ENST00000416425
RefSeq Acc Id: ENSP00000346349   ⟸   ENST00000354379
RefSeq Acc Id: ENSP00000416907   ⟸   ENST00000434749
RefSeq Acc Id: ENSP00000416364   ⟸   ENST00000421276
RefSeq Acc Id: ENSP00000379705   ⟸   ENST00000396428
RefSeq Acc Id: ENSP00000416013   ⟸   ENST00000436858
RefSeq Acc Id: XP_047305160   ⟸   XM_047449204
- Peptide Label: isoform X17
RefSeq Acc Id: XP_047305158   ⟸   XM_047449202
- Peptide Label: isoform X14
RefSeq Acc Id: XP_047305159   ⟸   XM_047449203
- Peptide Label: isoform X16
RefSeq Acc Id: XP_047305161   ⟸   XM_047449205
- Peptide Label: isoform X21
RefSeq Acc Id: XP_047305163   ⟸   XM_047449207
- Peptide Label: isoform X24
RefSeq Acc Id: XP_047305164   ⟸   XM_047449208
- Peptide Label: isoform X25
- UniProtKB: A0A1S5UZ17 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047305162   ⟸   XM_047449206
- Peptide Label: isoform X24
RefSeq Acc Id: XP_047305157   ⟸   XM_047449201
- Peptide Label: isoform X1
- UniProtKB: Q9Y608 (UniProtKB/Swiss-Prot),   Q68CV3 (UniProtKB/Swiss-Prot),   B4DY63 (UniProtKB/Swiss-Prot),   A8MXR0 (UniProtKB/Swiss-Prot),   A8K649 (UniProtKB/Swiss-Prot),   Q9NXH5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054204365   ⟸   XM_054348390
- Peptide Label: isoform X9
RefSeq Acc Id: XP_054204384   ⟸   XM_054348409
- Peptide Label: isoform X25
- UniProtKB: A0A1S5UZ17 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054204378   ⟸   XM_054348403
- Peptide Label: isoform X21
RefSeq Acc Id: XP_054204381   ⟸   XM_054348406
- Peptide Label: isoform X24
RefSeq Acc Id: XP_054204375   ⟸   XM_054348400
- Peptide Label: isoform X19
RefSeq Acc Id: XP_054204373   ⟸   XM_054348398
- Peptide Label: isoform X17
RefSeq Acc Id: XP_054204359   ⟸   XM_054348384
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054204376   ⟸   XM_054348401
- Peptide Label: isoform X20
RefSeq Acc Id: XP_054204374   ⟸   XM_054348399
- Peptide Label: isoform X18
RefSeq Acc Id: XP_054204370   ⟸   XM_054348395
- Peptide Label: isoform X14
RefSeq Acc Id: XP_054204358   ⟸   XM_054348383
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054204356   ⟸   XM_054348381
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054204357   ⟸   XM_054348382
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054204369   ⟸   XM_054348394
- Peptide Label: isoform X13
RefSeq Acc Id: XP_054204372   ⟸   XM_054348397
- Peptide Label: isoform X16
RefSeq Acc Id: XP_054204363   ⟸   XM_054348388
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054204371   ⟸   XM_054348396
- Peptide Label: isoform X15
RefSeq Acc Id: XP_054204366   ⟸   XM_054348391
- Peptide Label: isoform X10
RefSeq Acc Id: XP_054204362   ⟸   XM_054348387
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054204368   ⟸   XM_054348393
- Peptide Label: isoform X12
RefSeq Acc Id: XP_054204364   ⟸   XM_054348389
- Peptide Label: isoform X8
RefSeq Acc Id: XP_054204350   ⟸   XM_054348375
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054204379   ⟸   XM_054348404
- Peptide Label: isoform X22
RefSeq Acc Id: XP_054204377   ⟸   XM_054348402
- Peptide Label: isoform X21
RefSeq Acc Id: XP_054204383   ⟸   XM_054348408
- Peptide Label: isoform X24
RefSeq Acc Id: XP_054204361   ⟸   XM_054348386
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054204352   ⟸   XM_054348377
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054204354   ⟸   XM_054348379
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054204380   ⟸   XM_054348405
- Peptide Label: isoform X23
RefSeq Acc Id: XP_054204385   ⟸   XM_054348410
- Peptide Label: isoform X25
- UniProtKB: A0A1S5UZ17 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054204382   ⟸   XM_054348407
- Peptide Label: isoform X24
RefSeq Acc Id: XP_054204367   ⟸   XM_054348392
- Peptide Label: isoform X11
RefSeq Acc Id: XP_054204360   ⟸   XM_054348385
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054204351   ⟸   XM_054348376
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054204353   ⟸   XM_054348378
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054204355   ⟸   XM_054348380
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Y608-F1-model_v2 AlphaFold Q9Y608 1-721 view protein structure

Promoters
RGD ID:6800910
Promoter ID:HG_KWN:44364
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:ENST00000396428
Position:
Human AssemblyChrPosition (strand)Source
Build 36337,072,251 - 37,072,751 (-)MPROMDB
RGD ID:6863946
Promoter ID:EPDNEW_H5138
Type:initiation region
Name:LRRFIP2_2
Description:LRR binding FLII interacting protein 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H5139  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,174,583 - 37,174,643EPDNEW
RGD ID:6863948
Promoter ID:EPDNEW_H5139
Type:initiation region
Name:LRRFIP2_1
Description:LRR binding FLII interacting protein 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H5138  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38337,176,321 - 37,176,381EPDNEW
RGD ID:6801262
Promoter ID:HG_KWN:44372
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   K562,   Lymphoblastoid
Transcripts:OTTHUMT00000342195,   OTTHUMT00000342205,   OTTHUMT00000342206,   OTTHUMT00000342207,   UC003CGP.1,   UC003CGQ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36337,191,371 - 37,192,122 (-)MPROMDB
RGD ID:6801259
Promoter ID:HG_KWN:44373
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001134369,   NM_006309,   NM_017724,   OTTHUMT00000342200,   OTTHUMT00000342201,   OTTHUMT00000342202,   OTTHUMT00000342203,   OTTHUMT00000342204,   OTTHUMT00000342208,   OTTHUMT00000342209,   UC003CGR.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36337,192,801 - 37,193,782 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:6703 AgrOrtholog
COSMIC LRRFIP2 COSMIC
Ensembl Genes ENSG00000093167 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000336686 ENTREZGENE
  ENST00000336686.9 UniProtKB/Swiss-Prot
  ENST00000354379 ENTREZGENE
  ENST00000354379.8 UniProtKB/Swiss-Prot
  ENST00000396428 ENTREZGENE
  ENST00000396428.6 UniProtKB/Swiss-Prot
  ENST00000416425.5 UniProtKB/TrEMBL
  ENST00000421276 ENTREZGENE
  ENST00000421276.6 UniProtKB/Swiss-Prot
  ENST00000434749.5 UniProtKB/TrEMBL
  ENST00000436858.5 UniProtKB/TrEMBL
  ENST00000438374.5 UniProtKB/TrEMBL
  ENST00000440230 ENTREZGENE
  ENST00000440230.5 UniProtKB/Swiss-Prot
  ENST00000440742.2 UniProtKB/TrEMBL
  ENST00000452742.5 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.4090 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000093167 GTEx
HGNC ID HGNC:6703 ENTREZGENE
Human Proteome Map LRRFIP2 Human Proteome Map
InterPro LRRFIP1/2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:9209 UniProtKB/Swiss-Prot
NCBI Gene 9209 ENTREZGENE
OMIM 614043 OMIM
PANTHER LEUCINE-RICH REPEAT FLIGHTLESS-INTERACTING PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR19212 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam LRRFIP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA30466 PharmGKB
UniProt A0A1S5UZ17 ENTREZGENE, UniProtKB/TrEMBL
  A8K649 ENTREZGENE
  A8MXR0 ENTREZGENE
  B4DY63 ENTREZGENE
  C9J0U5_HUMAN UniProtKB/TrEMBL
  C9J321_HUMAN UniProtKB/TrEMBL
  C9JC17_HUMAN UniProtKB/TrEMBL
  C9JJC9_HUMAN UniProtKB/TrEMBL
  C9JSU1_HUMAN UniProtKB/TrEMBL
  H7C3N9_HUMAN UniProtKB/TrEMBL
  LRRF2_HUMAN UniProtKB/Swiss-Prot
  Q68CV3 ENTREZGENE
  Q9NXH5 ENTREZGENE
  Q9Y608 ENTREZGENE
UniProt Secondary A8K649 UniProtKB/Swiss-Prot
  A8MXR0 UniProtKB/Swiss-Prot
  B4DY63 UniProtKB/Swiss-Prot
  Q68CV3 UniProtKB/Swiss-Prot
  Q9NXH5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-28 LRRFIP2  LRR binding FLII interacting protein 2    leucine rich repeat (in FLII) interacting protein 2  Symbol and/or name change 5135510 APPROVED