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Gene: Sorcs1 (sortilin-related VPS10 domain containing receptor 1) Rattus norvegicus

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Symbol:

Sorcs1

Name:

sortilin-related VPS10 domain containing receptor 1

RGD ID:

1305910

Description:

Predicted to be involved in post-Golgi vesicle-mediated transport. Predicted to be active in Golgi apparatus and membrane. Used to study proteinuria. Orthologous to human SORCS1 (sortilin related VPS10 domain containing receptor 1); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC309533; VPS10 domain receptor protein SORCS 1; VPS10 domain-containing receptor SorCS1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

Sorcs1^em1Mcwi

Genetic Models:

FHH-Chr 1^BN-Sorcs1^em1Mcwi-/- ; FHH-Chr 1^BN-Sorcs1^em1Mcwi

Candidate Gene For:

Niddm65

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	259,022,007 - 259,535,731 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	259,021,631 - 259,535,685 (-)	Ensembl				GRCr8
mRatBN7.2	1	249,080,662 - 249,594,520 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	249,081,355 - 249,594,507 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	257,225,370 - 257,730,896 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	263,918,158 - 264,423,716 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	256,561,905 - 257,073,670 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	269,965,824 - 270,473,097 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	269,973,351 - 270,472,866 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	277,404,996 - 277,912,261 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	255,767,411 - 256,279,565 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	244,828,397 - 245,333,325 (-)	NCBI		Celera
RGSC_v3.1	1	256,033,640 - 256,545,663 (-)	NCBI
Cytogenetic Map	1	q55	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease 6 (ISO)

prostate cancer (ISO)

proteinuria (IMP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2-methylcholine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aldehydo-D-glucose (ISO)

all-trans-retinoic acid (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbamazepine (ISO)

chlorpyrifos (ISO)

Cuprizon (EXP)

D-glucose (ISO)

diarsenic trioxide (ISO)

disodium selenite (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

entinostat (ISO)

ethanol (ISO)

folic acid (ISO)

fructose (ISO)

fulvestrant (ISO)

glucose (ISO)

herbicide (ISO)

ketamine (EXP)

lead(0) (ISO)

mercury dibromide (ISO)

nitrofen (EXP)

paracetamol (EXP)

PCB138 (EXP)

phenylmercury acetate (ISO)

pioglitazone (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

tetrachloroethene (ISO)

titanium dioxide (ISO)

triadimefon (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triclosan (ISO)

valproic acid (EXP,ISO)

vinclozolin (EXP)

XL147 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

post-Golgi vesicle-mediated transport (IBA)

Cellular Component

Golgi apparatus (IBA)

membrane (IBA,IEA,ISO)

Molecular Function

protein binding (ISO)

transmembrane signaling receptor activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	SORCS1 contributes to the development of renal disease in rats and humans.	Lazar J, etal., Physiol Genomics. 2013 Aug 15;45(16):720-8. doi: 10.1152/physiolgenomics.00089.2013. Epub 2013 Jun 18.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:12482870	PMID:31658245	PMID:31857633

Genomics

Comparative Map Data

Sorcs1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	259,022,007 - 259,535,731 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	259,021,631 - 259,535,685 (-)	Ensembl				GRCr8
mRatBN7.2	1	249,080,662 - 249,594,520 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	249,081,355 - 249,594,507 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	257,225,370 - 257,730,896 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	263,918,158 - 264,423,716 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	256,561,905 - 257,073,670 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	269,965,824 - 270,473,097 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	269,973,351 - 270,472,866 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	277,404,996 - 277,912,261 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	255,767,411 - 256,279,565 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	244,828,397 - 245,333,325 (-)	NCBI		Celera
RGSC_v3.1	1	256,033,640 - 256,545,663 (-)	NCBI
Cytogenetic Map	1	q55	NCBI

SORCS1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	106,573,663 - 107,181,138 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	106,573,663 - 107,164,706 (-)	Ensembl			hg38	GRCh38
GRCh37	10	108,333,421 - 108,924,464 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	108,323,411 - 108,914,282 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	10	108,323,410 - 108,914,282	NCBI
Celera	10	102,072,553 - 102,663,374 (-)	NCBI		Celera
Cytogenetic Map	10	q25.1	NCBI
HuRef	10	101,965,988 - 102,556,901 (-)	NCBI		HuRef
CHM1_1	10	108,615,122 - 109,206,295 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	107,460,647 - 108,068,078 (-)	NCBI		T2T-CHM13v2.0

Sorcs1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	50,131,733 - 50,668,030 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	50,131,737 - 50,667,084 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	19	50,143,295 - 50,679,129 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	50,143,299 - 50,678,646 (-)	Ensembl			mm10	GRCm38
MGSCv37	19	50,222,150 - 50,753,102 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	19	50,204,284 - 50,731,796 (-)	NCBI		MGSCv36	mm8
Celera	19	50,907,555 - 51,438,064 (-)	NCBI		Celera
Cytogenetic Map	19	D1	NCBI
cM Map	19	45.05	NCBI

Sorcs1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955485	3,719,008 - 4,218,699 (+)	Ensembl
ChiLan1.0	NW_004955485	3,719,006 - 4,222,143 (+)	NCBI	ChiLan1.0	ChiLan1.0

SORCS1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	118,454,472 - 119,044,048 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	118,459,805 - 119,049,387 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	103,164,581 - 103,753,754 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	106,623,481 - 107,211,230 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

SORCS1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	18,619,015 - 18,933,785 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	18,622,234 - 18,797,249 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	18,745,291 - 19,221,898 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	19,098,613 - 19,608,198 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	19,067,554 - 19,609,122 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	18,630,873 - 19,139,229 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	18,678,797 - 19,178,427 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	18,811,161 - 19,310,390 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Sorcs1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	27,085,308 - 27,300,512 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936776	28,537 - 241,135 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936776	27,519 - 240,225 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SORCS1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	117,479,787 - 118,009,583 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	14	117,479,817 - 118,009,485 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	127,817,702 - 128,359,641 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SORCS1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	99,581,375 - 100,171,637 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666048	60,747,868 - 61,334,611 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Sorcs1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624831	5,435,192 - 5,736,481 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624831	5,433,671 - 5,901,911 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Sorcs1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	49,612,314 - 50,119,457 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Sorcs1
2852 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	247
Count of miRNA genes:	165
Interacting mature miRNAs:	179
Transcripts:	ENSRNOT00000015979
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	154961463	266453731	Rat
634313	Niddm43	Non-insulin dependent diabetes mellitus QTL 43			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	208479811	269633915	Rat
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	160111531	262090437	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	266453731	Rat
70211	Niddm24	Non-insulin dependent diabetes mellitus QTL 24	3.79		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	224633915	269633915	Rat
724552	Glom2	Glomerulus QTL 2	3.3	0.0001	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	1	232312773	270518180	Rat
1354652	Kidm20	Kidney mass QTL 20	4.3		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	186658830	266453731	Rat
61327	Eae7	Experimental allergic encephalomyelitis QTL 7	5.6		body mass (VT:0001259)	change in body weight (CMO:0002045)	1	226175591	270518180	Rat
1578775	Iddm21	Insulin dependent diabetes mellitus QTL 21	4.13		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	245782829	270518180	Rat
1600395	Niddm69	Non-insulin dependent diabetes mellitus QTL 69	4.14	0.0002	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	205233991	267096252	Rat
1578763	Kidm29	Kidney mass QTL 29	3.3	0.0001	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	1	218829748	263829748	Rat
1354624	Cm35	Cardiac mass QTL35	5.7		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	186658830	266453731	Rat
1600396	Niddm68	Non-insulin dependent diabetes mellitus QTL 68	4.97	0.0003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	205233991	267096252	Rat
631837	Niddm35	Non-insulin dependent diabetes mellitus QTL 35		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	1	248619887	269633915	Rat
1600397	Edcs4	Endometrial carcinoma susceptibility QTL 4	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	1	176288899	270518180	Rat
631836	Stl31	Serum triglyceride level QTL 31	4.64	5e-06	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	1	247133834	270518180	Rat
2312564	Glom18	Glomerulus QTL 18	2.4	0.003	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	1	194786607	262083703	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	162548015	270518180	Rat
1600388	Niddm67	Non-insulin dependent diabetes mellitus QTL 67	5.84	0.000004	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	205233991	267096252	Rat
1598853	Memor3	Memory QTL 3	4.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	1	152919152	268496042	Rat
1600390	Niddm64	Non-insulin dependent diabetes mellitus QTL 64		0.003	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	257624997	270518180	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	160111531	262090437	Rat
1300108	Rf8	Renal function QTL 8	3.75		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	1	237995023	269633915	Rat
734767	Niddm57	Non-insulin dependent diabetes mellitus QTL 57			body mass (VT:0001259)	body weight (CMO:0000012)	1	233480549	270108840	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
631215	Stl8	Serum triglyceride level QTL 8	9.27	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	1	234540191	270518180	Rat
7387289	Uae45	Urinary albumin excretion QTL 45	2.86	0.0021	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	233204160	270518180	Rat
631843	Bw116	Body weight QTL 116	4.1	0.016	abdominal adipose amount (VT:1000220)	abdominal fat pad weight (CMO:0000088)	1	233480549	270108840	Rat
731175	Uae20	Urinary albumin excretion QTL 20	3.5	0.0018	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	207163993	269633915	Rat
1598839	Rf56	Renal function QTL 56			renal blood flow trait (VT:2000006)	ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)	1	255849111	270518180	Rat
1581544	Rf52	Renal function QTL 52		0.05	urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	1	241569529	269633915	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
724538	Kidm1	Kidney mass QTL 1	3.2		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	223134011	262090599	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	160111426	262090599	Rat
631536	Lnnr2	Liver neoplastic nodule remodeling QTL 2	2.9	0.0005	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	1	243953669	270518180	Rat
734769	Niddm58	Non-insulin dependent diabetes mellitus QTL 58			body mass (VT:0001259)	body weight (CMO:0000012)	1	225108840	270108840	Rat
738032	Hcas5	Hepatocarcinoma susceptibility QTL 5	3.12		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	185857683	270518180	Rat
2302040	Pia35	Pristane induced arthritis QTL 35	3.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	1	226175591	270518180	Rat
631669	Iddm9	Insulin dependent diabetes mellitus QTL 9	2.8	0.039	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	233349180	270518180	Rat
1598821	Rf55	Renal function QTL 55	6.3		renal blood flow trait (VT:2000006)	ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)	1	228174566	270518180	Rat
724533	Rf51	Renal function QTL 51	5.3	0.0002	kidney plasma flow trait (VT:0005524)	renal plasma flow (CMO:0001914)	1	228180370	266453608	Rat

Markers in Region

D1Got243

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,464,806 - 249,465,102 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,343,685 - 270,343,980	NCBI	Rnor6.0
Rnor_5.0	1	277,782,857 - 277,783,152	UniSTS	Rnor5.0
RGSC_v3.4	1	256,147,163 - 256,147,458	UniSTS	RGSC3.4
RGSC_v3.1	1	256,413,080 - 256,413,374	RGD
RH 3.4 Map	1	1647.6	UniSTS
RH 3.4 Map	1	1647.6	RGD
Cytogenetic Map	1	q55	UniSTS

D1Swe6

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,556,757 - 249,557,041 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,435,354 - 270,435,635	NCBI	Rnor6.0
Rnor_5.0	1	277,874,526 - 277,874,807	UniSTS	Rnor5.0
RGSC_v3.4	1	256,242,053 - 256,242,334	UniSTS	RGSC3.4
Celera	1	245,295,908 - 245,296,189	UniSTS
Cytogenetic Map	1	q55	UniSTS

D1Swe5

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,396,204 - 249,396,498 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,282,616 - 270,282,909	NCBI	Rnor6.0
Rnor_5.0	1	277,721,788 - 277,722,081	UniSTS	Rnor5.0
RGSC_v3.4	1	256,078,665 - 256,078,958	UniSTS	RGSC3.4
Celera	1	245,135,983 - 245,136,276	UniSTS
Cytogenetic Map	1	q55	UniSTS

AU047999

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,246,112 - 249,246,400 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,132,136 - 270,132,423	NCBI	Rnor6.0
Rnor_5.0	1	277,571,308 - 277,571,595	UniSTS	Rnor5.0
RGSC_v3.4	1	255,928,594 - 255,928,881	UniSTS	RGSC3.4
Cytogenetic Map	1	q55	UniSTS

RH128986

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,085,276 - 249,085,472 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	269,970,439 - 269,970,634	NCBI	Rnor6.0
Rnor_5.0	1	277,409,611 - 277,409,806	UniSTS	Rnor5.0
RGSC_v3.4	1	255,764,499 - 255,764,694	UniSTS	RGSC3.4
Celera	1	244,825,485 - 244,825,680	UniSTS
RH 3.4 Map	1	1647.7	UniSTS
Cytogenetic Map	1	q55	UniSTS

RH142862

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,589,323 - 249,589,454 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,467,911 - 270,468,041	NCBI	Rnor6.0
Rnor_5.0	1	277,907,083 - 277,907,213	UniSTS	Rnor5.0
RGSC_v3.4	1	256,274,610 - 256,274,740	UniSTS	RGSC3.4
Celera	1	245,328,375 - 245,328,505	UniSTS
RH 3.4 Map	1	1652.0	UniSTS
Cytogenetic Map	1	q55	UniSTS

RH144267

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	1	259,165,619 - 259,165,827 (+)	Marker Load Pipeline
mRatBN7.2	1	249,224,379 - 249,224,588 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,110,403 - 270,110,611	NCBI	Rnor6.0
Rnor_5.0	1	277,549,575 - 277,549,783	UniSTS	Rnor5.0
RGSC_v3.4	1	255,906,861 - 255,907,069	UniSTS	RGSC3.4
Celera	1	244,964,441 - 244,964,649	UniSTS
RH 3.4 Map	1	1649.4	UniSTS
Cytogenetic Map	1	q55	UniSTS

AW530705

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,577,642 - 249,577,799 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,456,233 - 270,456,389	NCBI	Rnor6.0
Rnor_5.0	1	277,895,405 - 277,895,561	UniSTS	Rnor5.0
RGSC_v3.4	1	256,262,932 - 256,263,088	UniSTS	RGSC3.4
Celera	1	245,316,793 - 245,316,949	UniSTS
RH 3.4 Map	1	1650.3	UniSTS
Cytogenetic Map	1	q55	UniSTS

BF401123

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,515,864 - 249,516,027 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,393,697 - 270,393,859	NCBI	Rnor6.0
Rnor_5.0	1	277,832,869 - 277,833,031	UniSTS	Rnor5.0
RGSC_v3.4	1	256,200,300 - 256,200,462	UniSTS	RGSC3.4
Celera	1	245,254,983 - 245,255,145	UniSTS
RH 3.4 Map	1	1648.7	UniSTS
Cytogenetic Map	1	q55	UniSTS

BE107951

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,228,447 - 249,228,631 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,114,471 - 270,114,654	NCBI	Rnor6.0
Rnor_5.0	1	277,553,643 - 277,553,826	UniSTS	Rnor5.0
RGSC_v3.4	1	255,910,929 - 255,911,112	UniSTS	RGSC3.4
Celera	1	244,968,509 - 244,968,692	UniSTS
RH 3.4 Map	1	1648.7	UniSTS
Cytogenetic Map	1	q55	UniSTS

RH137888

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,399,008 - 249,399,151 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,285,420 - 270,285,562	NCBI	Rnor6.0
Rnor_5.0	1	277,724,592 - 277,724,734	UniSTS	Rnor5.0
RGSC_v3.4	1	256,081,469 - 256,081,611	UniSTS	RGSC3.4
Celera	1	245,138,790 - 245,138,932	UniSTS
RH 3.4 Map	1	1648.7	UniSTS
Cytogenetic Map	1	q55	UniSTS

RH140348

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,080,890 - 249,081,010 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	269,966,053 - 269,966,172	NCBI	Rnor6.0
Rnor_5.0	1	277,405,225 - 277,405,344	UniSTS	Rnor5.0
RGSC_v3.4	1	255,760,113 - 255,760,232	UniSTS	RGSC3.4
Celera	1	244,821,099 - 244,821,218	UniSTS
RH 3.4 Map	1	1648.3	UniSTS
Cytogenetic Map	1	q55	UniSTS

D1Hmgc19

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	249,583,745 - 249,583,894 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	270,462,331 - 270,462,479	NCBI	Rnor6.0
Rnor_5.0	1	277,901,503 - 277,901,651	UniSTS	Rnor5.0
Celera	1	245,322,849 - 245,322,997	UniSTS
Cytogenetic Map	1	q55	UniSTS

Genetic Models

This gene Sorcs1 is modified in the following models/strains:

FHH-Chr 1^BN-Sorcs1^em1Mcwi-/- FHH-Chr 1^BN-Sorcs1^em1Mcwi

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	10	65	161	79	78	47	27	47	6	269	123	10	140	75	89	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001438076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001438077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080712	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265314	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000015979 ⟹ ENSRNOP00000015979

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	259,028,864 - 259,535,685 (-)	Ensembl
mRatBN7.2 Ensembl	1	249,088,189 - 249,594,507 (-)	Ensembl
Rnor_6.0 Ensembl	1	269,973,351 - 270,472,866 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098704 ⟹ ENSRNOP00000091270

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	259,021,738 - 259,535,685 (-)	Ensembl
mRatBN7.2 Ensembl	1	249,088,357 - 249,594,507 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099121 ⟹ ENSRNOP00000090827

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	259,028,830 - 259,535,685 (-)	Ensembl
mRatBN7.2 Ensembl	1	249,081,355 - 249,594,507 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108738 ⟹ ENSRNOP00000078816

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	259,021,631 - 259,535,685 (-)	Ensembl
mRatBN7.2 Ensembl	1	249,081,355 - 249,594,507 (-)	Ensembl

RefSeq Acc Id:

NM_001191563 ⟹ NP_001178492

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,029,432 - 259,535,486 (-)	NCBI
mRatBN7.2	1	249,088,189 - 249,594,279 (-)	NCBI
Rnor_6.0	1	269,973,351 - 270,472,866 (-)	NCBI
Rnor_5.0	1	277,404,996 - 277,912,261 (-)	NCBI
Celera	1	244,828,397 - 245,333,325 (-)	NCBI

Sequence:

show sequence

ATGGGAAAAGTTGGCGCCGGGGACGGCTCCTCGGCCGCGCTTAGCGCGCTCCTAACGGGAGCCG
GGCTTCTGATGCTCTTAGCCCCTGGCATCTGCAGCAGCCTTTCTTGCTGCCCTCCGCAACACCC
TAGCTCGACCCCACGCTGGACCCTTACCCCAAGAGGCTTTTCTTACCCCGGACCGCTGGGTCGG
GCTCCTGCCACGCCCCCGCCCCTCTTCATGAGACCCCTGTTCGCAGTGGCCCCCGGGGACCGGG
CGCTGTTTCTGGAGCGAGCTGGGGGCAGCAGGGTGTCAGTGGCGACCGCTTCACGCTCTGGCCG
TAGGAGACGGAGTGGAATGGATCCTGAGAAGACTGAACCCGGAGAGGGTACGAGTCGGAGCCGC
CGGGACATGCTAAGGGATGGAGGGCAGCAGGGGCCTGGGACTGGCGCGCGGGACCCGGACAAAG
CCACTCGCTTCCGGATGGAGGAGCTGAGATTGACCAGCACCACATTTGCGCTGACTGGAGACTC
GGCACACAACCAAGCTATGGTCCACTGGTCTGGCCACAACAGCAGCGTGATTCTCATTTTGACA
AAGCTCTATGACTATAACCTGGGAAGCATCACTGAGAGCTCGCTTTGGAGGTCAACCGATTATG
GGACAACCTACGAGAAGCTGAATGATAAAGTGGGGTTGAAGACCATTTTGAGCTATCTCTATGT
GTGCCCAACCAACAAGCGTAAGATTATGCTACTCACGGACCCGGAGATTGAGAGCAGTTTGTTG
ATCAGCTCAGATGAAGGGGCAACCTATCAAAAGTACCGGCTCAACTTTTACATCCAGAGTTTGC
TTTTCCATCCGAAGCAAGAAGACTGGATCCTGGCCTACAGTCAAGACCAAAAGTTATACAGCTC
TGCTGAGTTTGGCAGAAGATGGCAGCTTATCCAGGAAGCAGTGGTACCCAATAGGTTTTACTGG
TCTGTGCTGGGGTCGAACAAAGAACCAGACCTTGTGCATCTCGAGGCCAGGACCGTAGATGGTC
ACTCCATATACTTAACTTGTCGGATGCAAAACTGCACTGAAGCCAACAGAAATAAACCTTTCCC
AGGATACATTGACCCGGATTCTTTGATTGTTCAGGATGATTATGTGTTTGTTCAGCTCACATCA
GGAGGAAGACCACATTACTATGTGTCCTACCGAAGAAACCCATTTGCACAAATGAAACTTCCGA
AATATGCTTTGCCCAAGGATATGCATGTCATCAGTACGGATGAGAATCAGGTGTTTGCAGCAGT
TCAAGAATGGAACCAGAATGACACCTACAACCTGTACATCTCAGACACACGCGGGGTCTACTTC
ACGCTGGCCTTGGAGAACGTGCAGAGCAGCAGAGGCCCTGAAGGCAATGTCATGATTGACCTTT
ATGAGGTAGCAGGGATAAAGGGAATGTTCTTGGCTAACAAGAAGATTGACAACCAAGTGAAGAC
TTTCATCACTTACAACAAAGGCAGAGACTGGCGTTTGCTGCAGGCTCCAGATGCAGATCTAAGG
GGGGACCCTGTGCACTGTTTGCTGCCCTACTGTTCACTACACCTTCATCTCAAAGTTTCTGAGA
ATCCCTACACATCTGGGATCATTGCCAGCAGAGACACAGCCCCAAGTATTATAGTTGCATCAGG
TAACATAGGCTCTGAGTTGTCAGACAGCGACATCAGCATGTTTGTATCATCAGATGCAGGGAAC
ACTTGGAGGCAGATTTTTGAAGAAGAGCACAGCATTTTGTACCTTGATCAAGGGGGAGTCCTGG
TTGCTATGAAACACACATCTCTCCCAATTCGGCACCTGTGGTTGAGTTTTGATGAAGGGAGGTC
TTGGAGCAAATACAGTTTTACATCCATTCCACTTTTTGTGGATGGAGTCCTGGGGGAGCCTGGA
GAAGAGACACTAATCATGACAGTGTTTGGACACTTCAGTCATCGTTCTGAGTGGCAGCTGGTCA
AAGTGGATTACAAGTCCATTTTTGACAGACGCTGTGCTGAAGAAGACTACAGACCCTGGCAGTT
ACATAGCCAGGGGGAAGCATGCATCATGGGAGCCAAGAGGATCTATAAGAAGCGAAAATCTGAG
CGCAAGTGTATGCAAGGGACGTATGCAGGAGCGATGGAGTCTGAGCCTTGTGTGTGTACAGAGG
CGGACTTTGACTGTGACTATGGCTACGAGAGACATAGTAGTGGACAATGCCTACCAGCATTTTG
GTTCAACCCGTCCTCACTGTCAAAAGACTGCAGCTTGGGACAGAGTTACCTCAACAGCACTGGG
TACAGGAAGGTGGTCTCCAATAACTGCACGGACGGAGTGAGGGAACAGTACACCGCCAAACCAC
AGAAGTGTCCAGGGAAGGCCCCTCGTGGGCTACGGATTGTCACTGCAGATGGGAAACTGACAGC
AGAACAGGGGCACAATGTCACTCTCATGGTGCAGTTGGAAGAGGGGGATGTACAGCGGACACTC
ATCCAAGTGGACTTTGGAGATGGCATTGCGGTGTCTTATGTCAACCTCAGCTCGATGGAAGACG
GAATCAAGCATGTATATCAGAATGTGGGCATTTTCCGAGTGACCGTGCAGGTGGACAACAGTCT
GGGGTCTGACAGCGCCGTCCTGTACTTACATGTAACTTGTCCCCTGGAACATGTGCACCTGTCC
CTTCCTTTTGTCACAACAAAGAACAAAGAGGTCAACGCAACTGCCGTGCTGTGGCCCAGCCAAG
TGGGCACTCTCACTTACGTGTGGTGGTATGGGAACAACACAGAGCCCCTGATCACCTTGGAGGG
CAGCATATCATTCAAGTTTACTTCTGAAGGAATGAACACTATCACGGTACAGGTCTCAGCTGGG
AATGCCATACTGCAAGACACTAAGACCATTGCGGTATACGAGGAATTCCGCTCTCTTCGCTTGG
CTTTTTCTCCAAACTTGGATGACTACAACCCTGACATCCCGGAGTGGAGGAGGGACATCAGCCG
AGTAATCAAAAAGTCTCTGGTGGAAGCCACAGGGATTCCCAGCCAGCATATCCTGGTGGCAGTG
TTACCTGGCTTACCCACTGCTGCTGAGCTCTTTGTTTTGCCCTATCAAGATGGAGCTAGAGAAA
ACAAAAGGTCCCCAGAGGACCTGGAGCAGATATCTGAAGTTCTAATCCACAAACTCAACCAAAA
CTTGGTGCACTTTGAGCTGAAGCCTGGGGTCCAAGTTCTTGTCCACGCAGCTCACCTAACAGCA
GCCCCCCTGGTGGACCTCACTCCTACCCACAGCGGATCTGCCATGCTGATGTTGCTCTCAGTGG
TGTTTGTGGGGTTGGCCGTGTTCGTCATCTACAAGTTTAAAAGGAGAGTAGCTTTAACCTCCCC
TCCCTCCCCTTCTACTCAACCTGGGGACTCATCTCTCCGATTGCAAAGACCAAGACAAGCCACA
CCACCTTCATCGCCAAAGCGGGGATCTGCTGGGGCACAATTTGCAATCTAAGGAAAACCCCCAA
AGGCTACAGGAGACCTGCTGATCAGAAAAGAATTTCGCTCTTGTCAAGTACATCATCCTTCATG
ACCACTAACTTTGTTTTTTTTTTTTTCTTCTTCTGTTGTTCTGTTTCCTATTTCGCCAGGAAGT
ATTTCCATAGTTGCTGAGAATCAAAGCACAAAAGAAATCCCTACCTATGTAAATGTTTGAATGG
AGGACGCCAGTAAAAACAAACAAACAAAAAGTAAATAAAAATAAAAACAATCAAAATCCAAAAT
AACAAGTAAACACTCTCACTGCATCGGAACTTTTAAATTCTTCAGACACAGACAACAAGGGTTT
TTAGCTTTAAGCCTGTGCATGTGGACAATACTTTGAGAACGTGTTTGGAGGGGCAGTGTACAGG
TGCTCTATTTTAATGGAAAACACTCCCCTCCTTTCT

hide sequence

RefSeq Acc Id:

XM_006231519 ⟹ XP_006231581

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,022,007 - 259,535,634 (-)	NCBI
mRatBN7.2	1	249,080,662 - 249,594,424 (-)	NCBI
Rnor_6.0	1	269,966,589 - 270,472,968 (-)	NCBI
Rnor_5.0	1	277,404,996 - 277,912,261 (-)	NCBI

Sequence:

show sequence

GTTGTGGTCCTGAGCGCACACCCTGCCGCCGTCAGCCCAGTGCCTCGCTCCGCTGCCTGCCTTC
GGTTCGGGACCCCCTCTCCGCTCCTCTCCGCTCCAGAGATGGGAAAAGTTGGCGCCGGGGACGG
CTCCTCGGCCGCGCTTAGCGCGCTCCTAACGGGAGCCGGGCTTCTGATGCTCTTAGCCCCTGGC
ATCTGCAGCAGCCTTTCTTGCTGCCCTCCGCAACACCCTAGCTCGACCCCACGCTGGACCCTTA
CCCCAAGAGGCTTTTCTTACCCCGGACCGCTGGGTCGGGCTCCTGCCACGCCCCCGCCCCTCTT
CATGAGACCCCTGTTCGCAGTGGCCCCCGGGGACCGGGCGCTGTTTCTGGAGCGAGCTGGGGGC
AGCAGGGTGTCAGTGGCGACCGCTTCACGCTCTGGCCGTAGGAGACGGAGTGGAATGGATCCTG
AGAAGACTGAACCCGGAGAGGGTACGAGTCGGAGCCGCCGGGACATGCTAAGGGATGGAGGGCA
GCAGGGGCCTGGGACTGGCGCGCGGGACCCGGACAAAGCCACTCGCTTCCGGATGGAGGAGCTG
AGATTGACCAGCACCACATTTGCGCTGACTGGAGACTCGGCACACAACCAAGCTATGGTCCACT
GGTCTGGCCACAACAGCAGCGTGATTCTCATTTTGACAAAGCTCTATGACTATAACCTGGGAAG
CATCACTGAGAGCTCGCTTTGGAGGTCAACCGATTATGGGACAACCTACGAGAAGCTGAATGAT
AAAGTGGGGTTGAAGACCATTTTGAGCTATCTCTATGTGTGCCCAACCAACAAGCGTAAGATTA
TGCTACTCACGGACCCGGAGATTGAGAGCAGTTTGTTGATCAGCTCAGATGAAGGGGCAACCTA
TCAAAAGTACCGGCTCAACTTTTACATCCAGAGTTTGCTTTTCCATCCGAAGCAAGAAGACTGG
ATCCTGGCCTACAGTCAAGACCAAAAGTTATACAGCTCTGCTGAGTTTGGCAGAAGATGGCAGC
TTATCCAGGAAGCAGTGGTACCCAATAGGTTTTACTGGTCTGTGCTGGGGTCGAACAAAGAACC
AGACCTTGTGCATCTCGAGGCCAGGACCGTAGATGGTCACTCCATATACTTAACTTGTCGGATG
CAAAACTGCACTGAAGCCAACAGAAATAAACCTTTCCCAGGATACATTGACCCGGATTCTTTGA
TTGTTCAGGATGATTATGTGTTTGTTCAGCTCACATCAGGAGGAAGACCACATTACTATGTGTC
CTACCGAAGAAACCCATTTGCACAAATGAAACTTCCGAAATATGCTTTGCCCAAGGATATGCAT
GTCATCAGTACGGATGAGAATCAGGTGTTTGCAGCAGTTCAAGAATGGAACCAGAATGACACCT
ACAACCTGTACATCTCAGACACACGCGGGGTCTACTTCACGCTGGCCTTGGAGAACGTGCAGAG
CAGCAGAGGCCCTGAAGGCAATGTCATGATTGACCTTTATGAGGTAGCAGGGATAAAGGGAATG
TTCTTGGCTAACAAGAAGATTGACAACCAAGTGAAGACTTTCATCACTTACAACAAAGGCAGAG
ACTGGCGTTTGCTGCAGGCTCCAGATGCAGATCTAAGGGGGGACCCTGTGCACTGTTTGCTGCC
CTACTGTTCACTACACCTTCATCTCAAAGTTTCTGAGAATCCCTACACATCTGGGATCATTGCC
AGCAGAGACACAGCCCCAAGTATTATAGTTGCATCAGGTAACATAGGCTCTGAGTTGTCAGACA
GCGACATCAGCATGTTTGTATCATCAGATGCAGGGAACACTTGGAGGCAGATTTTTGAAGAAGA
GCACAGCATTTTGTACCTTGATCAAGGGGGAGTCCTGGTTGCTATGAAACACACATCTCTCCCA
ATTCGGCACCTGTGGTTGAGTTTTGATGAAGGGAGGTCTTGGAGCAAATACAGTTTTACATCCA
TTCCACTTTTTGTGGATGGAGTCCTGGGGGAGCCTGGAGAAGAGACACTAATCATGACAGTGTT
TGGACACTTCAGTCATCGTTCTGAGTGGCAGCTGGTCAAAGTGGATTACAAGTCCATTTTTGAC
AGACGCTGTGCTGAAGAAGACTACAGACCCTGGCAGTTACATAGCCAGGGGGAAGCATGCATCA
TGGGAGCCAAGAGGATCTATAAGAAGCGAAAATCTGAGCGCAAGTGTATGCAAGGGACGTATGC
AGGAGCGATGGAGTCTGAGCCTTGTGTGTGTACAGAGGCGGACTTTGACTGTGACTATGGCTAC
GAGAGACATAGTAGTGGACAATGCCTACCAGCATTTTGGTTCAACCCGTCCTCACTGTCAAAAG
ACTGCAGCTTGGGACAGAGTTACCTCAACAGCACTGGGTACAGGAAGGTGGTCTCCAATAACTG
CACGGACGGAGTGAGGGAACAGTACACCGCCAAACCACAGAAGTGTCCAGGGAAGGCCCCTCGT
GGGCTACGGATTGTCACTGCAGATGGGAAACTGACAGCAGAACAGGGGCACAATGTCACTCTCA
TGGTGCAGTTGGAAGAGGGGGATGTACAGCGGACACTCATCCAAGTGGACTTTGGAGATGGCAT
TGCGGTGTCTTATGTCAACCTCAGCTCGATGGAAGACGGAATCAAGCATGTATATCAGAATGTG
GGCATTTTCCGAGTGACCGTGCAGGTGGACAACAGTCTGGGGTCTGACAGCGCCGTCCTGTACT
TACATGTAACTTGTCCCCTGGAACATGTGCACCTGTCCCTTCCTTTTGTCACAACAAAGAACAA
AGAGGTCAACGCAACTGCCGTGCTGTGGCCCAGCCAAGTGGGCACTCTCACTTACGTGTGGTGG
TATGGGAACAACACAGAGCCCCTGATCACCTTGGAGGGCAGCATATCATTCAAGTTTACTTCTG
AAGGAATGAACACTATCACGGTACAGGTCTCAGCTGGGAATGCCATACTGCAAGACACTAAGAC
CATTGCGGTATACGAGGAATTCCGCTCTCTTCGCTTGGCTTTTTCTCCAAACTTGGATGACTAC
AACCCTGACATCCCGGAGTGGAGGAGGGACATCAGCCGAGTAATCAAAAAGTCTCTGGTGGAAG
CCACAGGGATTCCCAGCCAGCATATCCTGGTGGCAGTGTTACCTGGCTTACCCACTGCTGCTGA
GCTCTTTGTTTTGCCCTATCAAGATGGAGCTAGAGAAAACAAAAGGTCCCCAGAGGACCTGGAG
CAGATATCTGAAGTTCTAATCCACAAACTCAACCAAAACTTGGTGCACTTTGAGCTGAAGCCTG
GGGTCCAAGTTCTTGTCCACGCAGCTCACCTAACAGCAGCCCCCCTGGTGGACCTCACTCCTAC
CCACAGCGGATCTGCCATGCTGATGTTGCTCTCAGTGGTGTTTGTGGGGTTGGCCGTGTTCGTC
ATCTACAAGTTTAAAAGGAAGATCCCGGGGATTAATGTTTATGCCCAGATGCAAAATGAGAAAG
AACAAGAGCTGATCAATCCAGTCAGCCACACTGAAAGCAGGCCCACTGCCCCTCACCCTGACCT
CAGGAGGCCTGGCCAGCTTGTAGATGAGAAGGTGGAATCCCATCTCCTAGAGGCTGGAGAGATC
GCTCAGCGGTCAAGAACATTGGCTGCTCTTGCAGAGGACCCGGGTTCAATGCTCAGCACCAACA
AGGTGGCTCACAGGCATCTGTAACTTCAGTTCCGAGAGATACGACACCCTCTTCTGACCTCCAT
GGGCACCAGGAACACACGTGGTGCACAG

hide sequence

RefSeq Acc Id:

XM_006231520 ⟹ XP_006231582

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,026,343 - 259,535,731 (-)	NCBI
mRatBN7.2	1	249,085,100 - 249,594,424 (-)	NCBI
Rnor_6.0	1	269,970,262 - 270,472,968 (-)	NCBI
Rnor_5.0	1	277,404,996 - 277,912,261 (-)	NCBI

Sequence:

show sequence

GTTGTGGTCCTGAGCGCACACCCTGCCGCCGTCAGCCCAGTGCCTCGCTCCGCTGCCTGCCTTC
GGTTCGGGACCCCCTCTCCGCTCCTCTCCGCTCCAGAGATGGGAAAAGTTGGCGCCGGGGACGG
CTCCTCGGCCGCGCTTAGCGCGCTCCTAACGGGAGCCGGGCTTCTGATGCTCTTAGCCCCTGGC
ATCTGCAGCAGCCTTTCTTGCTGCCCTCCGCAACACCCTAGCTCGACCCCACGCTGGACCCTTA
CCCCAAGAGGCTTTTCTTACCCCGGACCGCTGGGTCGGGCTCCTGCCACGCCCCCGCCCCTCTT
CATGAGACCCCTGTTCGCAGTGGCCCCCGGGGACCGGGCGCTGTTTCTGGAGCGAGCTGGGGGC
AGCAGGGTGTCAGTGGCGACCGCTTCACGCTCTGGCCGTAGGAGACGGAGTGGAATGGATCCTG
AGAAGACTGAACCCGGAGAGGGTACGAGTCGGAGCCGCCGGGACATGCTAAGGGATGGAGGGCA
GCAGGGGCCTGGGACTGGCGCGCGGGACCCGGACAAAGCCACTCGCTTCCGGATGGAGGAGCTG
AGATTGACCAGCACCACATTTGCGCTGACTGGAGACTCGGCACACAACCAAGCTATGGTCCACT
GGTCTGGCCACAACAGCAGCGTGATTCTCATTTTGACAAAGCTCTATGACTATAACCTGGGAAG
CATCACTGAGAGCTCGCTTTGGAGGTCAACCGATTATGGGACAACCTACGAGAAGCTGAATGAT
AAAGTGGGGTTGAAGACCATTTTGAGCTATCTCTATGTGTGCCCAACCAACAAGCGTAAGATTA
TGCTACTCACGGACCCGGAGATTGAGAGCAGTTTGTTGATCAGCTCAGATGAAGGGGCAACCTA
TCAAAAGTACCGGCTCAACTTTTACATCCAGAGTTTGCTTTTCCATCCGAAGCAAGAAGACTGG
ATCCTGGCCTACAGTCAAGACCAAAAGTTATACAGCTCTGCTGAGTTTGGCAGAAGATGGCAGC
TTATCCAGGAAGCAGTGGTACCCAATAGGTTTTACTGGTCTGTGCTGGGGTCGAACAAAGAACC
AGACCTTGTGCATCTCGAGGCCAGGACCGTAGATGGTCACTCCATATACTTAACTTGTCGGATG
CAAAACTGCACTGAAGCCAACAGAAATAAACCTTTCCCAGGATACATTGACCCGGATTCTTTGA
TTGTTCAGGATGATTATGTGTTTGTTCAGCTCACATCAGGAGGAAGACCACATTACTATGTGTC
CTACCGAAGAAACCCATTTGCACAAATGAAACTTCCGAAATATGCTTTGCCCAAGGATATGCAT
GTCATCAGTACGGATGAGAATCAGGTGTTTGCAGCAGTTCAAGAATGGAACCAGAATGACACCT
ACAACCTGTACATCTCAGACACACGCGGGGTCTACTTCACGCTGGCCTTGGAGAACGTGCAGAG
CAGCAGAGGCCCTGAAGGCAATGTCATGATTGACCTTTATGAGGTAGCAGGGATAAAGGGAATG
TTCTTGGCTAACAAGAAGATTGACAACCAAGTGAAGACTTTCATCACTTACAACAAAGGCAGAG
ACTGGCGTTTGCTGCAGGCTCCAGATGCAGATCTAAGGGGGGACCCTGTGCACTGTTTGCTGCC
CTACTGTTCACTACACCTTCATCTCAAAGTTTCTGAGAATCCCTACACATCTGGGATCATTGCC
AGCAGAGACACAGCCCCAAGTATTATAGTTGCATCAGGTAACATAGGCTCTGAGTTGTCAGACA
GCGACATCAGCATGTTTGTATCATCAGATGCAGGGAACACTTGGAGGCAGATTTTTGAAGAAGA
GCACAGCATTTTGTACCTTGATCAAGGGGGAGTCCTGGTTGCTATGAAACACACATCTCTCCCA
ATTCGGCACCTGTGGTTGAGTTTTGATGAAGGGAGGTCTTGGAGCAAATACAGTTTTACATCCA
TTCCACTTTTTGTGGATGGAGTCCTGGGGGAGCCTGGAGAAGAGACACTAATCATGACAGTGTT
TGGACACTTCAGTCATCGTTCTGAGTGGCAGCTGGTCAAAGTGGATTACAAGTCCATTTTTGAC
AGACGCTGTGCTGAAGAAGACTACAGACCCTGGCAGTTACATAGCCAGGGGGAAGCATGCATCA
TGGGAGCCAAGAGGATCTATAAGAAGCGAAAATCTGAGCGCAAGTGTATGCAAGGGACGTATGC
AGGAGCGATGGAGTCTGAGCCTTGTGTGTGTACAGAGGCGGACTTTGACTGTGACTATGGCTAC
GAGAGACATAGTAGTGGACAATGCCTACCAGCATTTTGGTTCAACCCGTCCTCACTGTCAAAAG
ACTGCAGCTTGGGACAGAGTTACCTCAACAGCACTGGGTACAGGAAGGTGGTCTCCAATAACTG
CACGGACGGAGTGAGGGAACAGTACACCGCCAAACCACAGAAGTGTCCAGGGAAGGCCCCTCGT
GGGCTACGGATTGTCACTGCAGATGGGAAACTGACAGCAGAACAGGGGCACAATGTCACTCTCA
TGGTGCAGTTGGAAGAGGGGGATGTACAGCGGACACTCATCCAAGTGGACTTTGGAGATGGCAT
TGCGGTGTCTTATGTCAACCTCAGCTCGATGGAAGACGGAATCAAGCATGTATATCAGAATGTG
GGCATTTTCCGAGTGACCGTGCAGGTGGACAACAGTCTGGGGTCTGACAGCGCCGTCCTGTACT
TACATGTAACTTGTCCCCTGGAACATGTGCACCTGTCCCTTCCTTTTGTCACAACAAAGAACAA
AGAGGTCAACGCAACTGCCGTGCTGTGGCCCAGCCAAGTGGGCACTCTCACTTACGTGTGGTGG
TATGGGAACAACACAGAGCCCCTGATCACCTTGGAGGGCAGCATATCATTCAAGTTTACTTCTG
AAGGAATGAACACTATCACGGTACAGGTCTCAGCTGGGAATGCCATACTGCAAGACACTAAGAC
CATTGCGGTATACGAGGAATTCCGCTCTCTTCGCTTGGCTTTTTCTCCAAACTTGGATGACTAC
AACCCTGACATCCCGGAGTGGAGGAGGGACATCAGCCGAGTAATCAAAAAGTCTCTGGTGGAAG
CCACAGGGATTCCCAGCCAGCATATCCTGGTGGCAGTGTTACCTGGCTTACCCACTGCTGCTGA
GCTCTTTGTTTTGCCCTATCAAGATGGAGCTAGAGAAAACAAAAGGTCCCCAGAGGACCTGGAG
CAGATATCTGAAGTTCTAATCCACAAACTCAACCAAAACTTGGTGCACTTTGAGCTGAAGCCTG
GGGTCCAAGTTCTTGTCCACGCAGCTCACCTAACAGCAGCCCCCCTGGTGGACCTCACTCCTAC
CCACAGCGGATCTGCCATGCTGATGTTGCTCTCAGTGGTGTTTGTGGGGTTGGCCGTGTTCGTC
ATCTACAAGTTTAAAAGGAAGATCCCGGGGATTAATGTTTATGCCCAGATGCAAAATGAGAAAG
AACAAGAGCTGATCAATCCAGTCAGCCACACTGAAAGCAGGCCCACTGCCCCTCACCCTGACCT
CAGGAGGCCTGGCCAGCTTGTAGATGAGAAGGTGGAATCCCATCTCCTAGGAAGTATTTCCATA
GTTGCTGAGAATCAAAGCACAAAAGAAATCCCTACCTATGTAAATGTTTGAATGGAGGACGCCA
GTAAAAACAAACAAACAAAAAGTAAATAAAAATAAAAACAATCAAAATCCAAAATAACAAGTAA
ACACTCTCACTGCATCGGAACTTTTAAATTCTTCAGACACAGACAACAAGGGTTTTTAGCTTTA
AGCCTGTGCATGTGGACAATACTTTGAGAACGTGTTTGGAGGGGCAGTGTACAGGTGCTCTATT
TTAATGGAAAACACTCCCCTCCTTTCTCATCTCCTTTTCTGATCGGTCATGTTTGTAGAAAATT
CATAACATATACAGGCCAAGGATATCTGCATGTATTTTTGAAAATATTCTTGGCTCTAGATTTA
ACAGTTCTTTTAGCCCTAGGGGCTGATGGTGGATTAGCCATCCCCAGCCTCTTCCTAAAACCAC
AAAGACATGCACAGGATGAAACCCTGAGCTGCTTCTCTGTGTTCCTTAGCGTCACATTTCCTTT
CTAAGTTAATGTTAGTGGCTCCGTTGGTCAGCACCGACCACAGGCTGCTTTCTCTCCAGTCTCT
GTGGCCGCAGGGACAAAGATGCTAGTTAAAGATTCATACCCATGGAGGCAGGTTCCATAGCAAC
AGAAGGGAGGCTGGGAAGCAAAGCATCTTTGTTTCTTGCTCAACTTTTCTCCTTGCAGCTTTCC
CTCTTCCTACCCCCAAGGAATGTAAAAAAACAAAGACAAAACACAAGTGGGATTTTTTCCCCCA
GTACTTACTTGGTACCCTACTTTCACATTTGATTGTCATCCATGTATGAACATGTTCTCTCGCC
ATCTTTCAGGTTTTTCTCCTCCCTGTTCCCCATTATCTTTTGATGCCTCTCTCTTTGTCTGCTC
AACTGTGTTGCTAGATTTTGGATAGTAAACCTTATACTTCCTAAAACTGGCCCAGCCTACGCCA
ACCCTTACTCCACTCACAAGTCTTTAGCTCTATCAATTTTGTACAATCTTAAGCATGCCAGCTC
CCCTGCGTTCTAGCCAGGCTGCGTTCTGCACAGCTGGCAGGCTTCAGTTACATTTCCCCTCTAT
CTCCTCCCCAAAAACCTTTCTTTGCCAAATACCTCTGGTTTTCCCACATGGAAACATACACTGA
GTGTTAAAGAGTTTTTACATCCATAGTATTCCAAACCTGGACATGTGCTTTGGAAAGGAAAGCA
TAGAGATGAGCAGTGGTGGTTTGTGCATTAACAAAATCTTATGTGGTCCAATTCTAGAAGATTC
TCTTGAGAAAAGTTTTGAAAGTGTGACTATGGTGGAAGGTAATATCTTCTGTGATAGTTGCTGT
TATTTGATATTTCTGCTCTAGAATAACCATATTTGTAAAATAAAACTGATTTTAACCTCAAGGA
GAAACAGGTTAATGGACTTAATATAAAGAGTATTGAAAAACCTATACAAATCGGTCTTCTCATA
TATTTGAAAGAGATTTTGACCATTTGGGATGATCTCATTGATTCCAAGTATGTACTCGAATCTT
CAATTGTCACAGTATTGATGAAGAAAAATTCAGTATAAATGGAAGGGTAACTGCTTACAGCAAA
GTAAGGCTTACCCCTATCATGGCTTTGAAGCAAAAGAAAACCAGTTTCCCTAGAGGAATCATGC
AAGAGGCTCACAAAAAAGGAGCAGGGCTCCTGCTGAAGTTCTTCTAGTGACTGAGTTCCCCTTC
ATTACTGTGTACTAAAAAAATCCCAATCTCAAGTTGGGATGAAAGTGGTAAACCACTTCCAGAA
CCTACCATCCCTTGGCTATGTCCCAAAGCCAAGAACAGGGTATTGTCAAGGGCCTTGGTATATC
CCAATGATCAGTATGATCCTGGCTCTTGAATGGCTGATTCAGCGATCAGGTGACTTTGCCTTAT
ATGGCTGAAGCAAAGGGAGAGGAGGAAAGCTGGTGGTGTCAGAGGTTAATCAAACAGAAAGCTT
ATGGTCGAAGGTGCCCCATGTCAATATGGTCAATTTTGCCTGGGGACATAATCAATCAATTCTC
AAACTGCCAGGCTTCCTATCTCATAGGAAACATCTTCAGTGATTATTCTCTTCAGTTGAAGTCT
TCCATATTTAGTCTGGAAGACAAAAATATTTGGAAACCAAAATAGGTCCATTCAAACCAGCACA
GGGAATCCTCAGCGTTGCAGTTCAATTGATTCTAATTTTAAAAAAAAAAATATTTTAAAAAATG
AACAACATTCTTGATCTAGCACAGTGCCTTGCCTAGAATAACATTTTGAAAATTTGTTTGTCAA
TAAAAGGACAATGAGTGGGTGAAGAGACATGGGGAAGAAGGGTCTGTAAGTCTTCATGTAAAAT
AGAGATGGGCCTGAAATTCCTGCCATCTTGGGCAGTACCCAAAGTGGTCAGCTATAGATTCAGC
TTCTCCAGTGTCCTCATGTGCCTTTCCTCAAAGCTCCCTCTCACCTGTAGGTTGGTGAGGCAAG
GTACTTCTTAGAGAGGACCTACAAGTCCCTATAACCTTGGCTTGTGGATCTCAAAGTGTGATGC
CTAAGACAAGATAAGAGTGTCACTTACACTTGCTTGAAACGCAGATTCAAACTGGGCTAAAAAC
AGACCCTGCTATTTTGGAAATTCTAGGGATCTTTAGTATTATTTTTTGATTATGAATCATGGCT
GTCCCAACCAAATGTTTCACCAAGCCATCCAGGTGATGATGATACCTATGCTCAAGTTTGAGAA
CCACCACACTAGGCCTTGCAGCCAAATCCCAACAAGAAAGGAACATTTAGAACCTACAAGTGGG
ACAGAACCAAGTGCCTACCTCTCACTAAAAGCAGGTGCAAACACAATGAGGACTTTGGTGGATT
TAAGGCCAAAGGAGTGTAGGGAGGAATCCATAGAAGGTAAGATTCAGGGCAAGCTACAAATTGG
ATACTGCAACCTCTCTTAAATGTCCAAAGGGCAAACCGTACATGCTCTACCCTCAACTTCCCAC
TAACGTCGTTTCCCCCCTTGCCTCATTCTAATTGGATTCGAGGTCCAAATTGCAGAGGTTTGCT
TTGCTTTTTCCTCAGAAGTTCCAAACAGCAACTTTGAAAGCAATGGGGTGCTTGGCAGCAGCCG
TTGTGTGTTGTCCCGGATCCCAGCTGAGCATTGAGACCCCTTCATTTGCCAACTTCTTTTTATA
GGAAGCCAATTAAAAAAACATATGAAAGTTTTCTTATAGGATTGGAACTACTTCTAATTTTAAA
ATGACTTTTTTGATGTATTTTTTTGTTAAATACTATGTAGTGTAATGTATAATTGCTCTTGTTT
ATTGCTTTTACAATCATATTTATTAAACAGATAATGTCTCTAAA

hide sequence

RefSeq Acc Id:

XM_006231521 ⟹ XP_006231583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,022,007 - 259,535,664 (-)	NCBI
mRatBN7.2	1	249,080,662 - 249,594,424 (-)	NCBI
Rnor_6.0	1	269,965,824 - 270,472,968 (-)	NCBI
Rnor_5.0	1	277,404,996 - 277,912,261 (-)	NCBI

Sequence:

show sequence

GTTGTGGTCCTGAGCGCACACCCTGCCGCCGTCAGCCCAGTGCCTCGCTCCGCTGCCTGCCTTC
GGTTCGGGACCCCCTCTCCGCTCCTCTCCGCTCCAGAGATGGGAAAAGTTGGCGCCGGGGACGG
CTCCTCGGCCGCGCTTAGCGCGCTCCTAACGGGAGCCGGGCTTCTGATGCTCTTAGCCCCTGGC
ATCTGCAGCAGCCTTTCTTGCTGCCCTCCGCAACACCCTAGCTCGACCCCACGCTGGACCCTTA
CCCCAAGAGGCTTTTCTTACCCCGGACCGCTGGGTCGGGCTCCTGCCACGCCCCCGCCCCTCTT
CATGAGACCCCTGTTCGCAGTGGCCCCCGGGGACCGGGCGCTGTTTCTGGAGCGAGCTGGGGGC
AGCAGGGTGTCAGTGGCGACCGCTTCACGCTCTGGCCGTAGGAGACGGAGTGGAATGGATCCTG
AGAAGACTGAACCCGGAGAGGGTACGAGTCGGAGCCGCCGGGACATGCTAAGGGATGGAGGGCA
GCAGGGGCCTGGGACTGGCGCGCGGGACCCGGACAAAGCCACTCGCTTCCGGATGGAGGAGCTG
AGATTGACCAGCACCACATTTGCGCTGACTGGAGACTCGGCACACAACCAAGCTATGGTCCACT
GGTCTGGCCACAACAGCAGCGTGATTCTCATTTTGACAAAGCTCTATGACTATAACCTGGGAAG
CATCACTGAGAGCTCGCTTTGGAGGTCAACCGATTATGGGACAACCTACGAGAAGCTGAATGAT
AAAGTGGGGTTGAAGACCATTTTGAGCTATCTCTATGTGTGCCCAACCAACAAGCGTAAGATTA
TGCTACTCACGGACCCGGAGATTGAGAGCAGTTTGTTGATCAGCTCAGATGAAGGGGCAACCTA
TCAAAAGTACCGGCTCAACTTTTACATCCAGAGTTTGCTTTTCCATCCGAAGCAAGAAGACTGG
ATCCTGGCCTACAGTCAAGACCAAAAGTTATACAGCTCTGCTGAGTTTGGCAGAAGATGGCAGC
TTATCCAGGAAGCAGTGGTACCCAATAGGTTTTACTGGTCTGTGCTGGGGTCGAACAAAGAACC
AGACCTTGTGCATCTCGAGGCCAGGACCGTAGATGGTCACTCCATATACTTAACTTGTCGGATG
CAAAACTGCACTGAAGCCAACAGAAATAAACCTTTCCCAGGATACATTGACCCGGATTCTTTGA
TTGTTCAGGATGATTATGTGTTTGTTCAGCTCACATCAGGAGGAAGACCACATTACTATGTGTC
CTACCGAAGAAACCCATTTGCACAAATGAAACTTCCGAAATATGCTTTGCCCAAGGATATGCAT
GTCATCAGTACGGATGAGAATCAGGTGTTTGCAGCAGTTCAAGAATGGAACCAGAATGACACCT
ACAACCTGTACATCTCAGACACACGCGGGGTCTACTTCACGCTGGCCTTGGAGAACGTGCAGAG
CAGCAGAGGCCCTGAAGGCAATGTCATGATTGACCTTTATGAGGTAGCAGGGATAAAGGGAATG
TTCTTGGCTAACAAGAAGATTGACAACCAAGTGAAGACTTTCATCACTTACAACAAAGGCAGAG
ACTGGCGTTTGCTGCAGGCTCCAGATGCAGATCTAAGGGGGGACCCTGTGCACTGTTTGCTGCC
CTACTGTTCACTACACCTTCATCTCAAAGTTTCTGAGAATCCCTACACATCTGGGATCATTGCC
AGCAGAGACACAGCCCCAAGTATTATAGTTGCATCAGGTAACATAGGCTCTGAGTTGTCAGACA
GCGACATCAGCATGTTTGTATCATCAGATGCAGGGAACACTTGGAGGCAGATTTTTGAAGAAGA
GCACAGCATTTTGTACCTTGATCAAGGGGGAGTCCTGGTTGCTATGAAACACACATCTCTCCCA
ATTCGGCACCTGTGGTTGAGTTTTGATGAAGGGAGGTCTTGGAGCAAATACAGTTTTACATCCA
TTCCACTTTTTGTGGATGGAGTCCTGGGGGAGCCTGGAGAAGAGACACTAATCATGACAGTGTT
TGGACACTTCAGTCATCGTTCTGAGTGGCAGCTGGTCAAAGTGGATTACAAGTCCATTTTTGAC
AGACGCTGTGCTGAAGAAGACTACAGACCCTGGCAGTTACATAGCCAGGGGGAAGCATGCATCA
TGGGAGCCAAGAGGATCTATAAGAAGCGAAAATCTGAGCGCAAGTGTATGCAAGGGACGTATGC
AGGAGCGATGGAGTCTGAGCCTTGTGTGTGTACAGAGGCGGACTTTGACTGTGACTATGGCTAC
GAGAGACATAGTAGTGGACAATGCCTACCAGCATTTTGGTTCAACCCGTCCTCACTGTCAAAAG
ACTGCAGCTTGGGACAGAGTTACCTCAACAGCACTGGGTACAGGAAGGTGGTCTCCAATAACTG
CACGGACGGAGTGAGGGAACAGTACACCGCCAAACCACAGAAGTGTCCAGGGAAGGCCCCTCGT
GGGCTACGGATTGTCACTGCAGATGGGAAACTGACAGCAGAACAGGGGCACAATGTCACTCTCA
TGGTGCAGTTGGAAGAGGGGGATGTACAGCGGACACTCATCCAAGTGGACTTTGGAGATGGCAT
TGCGGTGTCTTATGTCAACCTCAGCTCGATGGAAGACGGAATCAAGCATGTATATCAGAATGTG
GGCATTTTCCGAGTGACCGTGCAGGTGGACAACAGTCTGGGGTCTGACAGCGCCGTCCTGTACT
TACATGTAACTTGTCCCCTGGAACATGTGCACCTGTCCCTTCCTTTTGTCACAACAAAGAACAA
AGAGGTCAACGCAACTGCCGTGCTGTGGCCCAGCCAAGTGGGCACTCTCACTTACGTGTGGTGG
TATGGGAACAACACAGAGCCCCTGATCACCTTGGAGGGCAGCATATCATTCAAGTTTACTTCTG
AAGGAATGAACACTATCACGGTACAGGTCTCAGCTGGGAATGCCATACTGCAAGACACTAAGAC
CATTGCGGTATACGAGGAATTCCGCTCTCTTCGCTTGGCTTTTTCTCCAAACTTGGATGACTAC
AACCCTGACATCCCGGAGTGGAGGAGGGACATCAGCCGAGTAATCAAAAAGTCTCTGGTGGAAG
CCACAGGGATTCCCAGCCAGCATATCCTGGTGGCAGTGTTACCTGGCTTACCCACTGCTGCTGA
GCTCTTTGTTTTGCCCTATCAAGATGGAGCTAGAGAAAACAAAAGGTCCCCAGAGGACCTGGAG
CAGATATCTGAAGTTCTAATCCACAAACTCAACCAAAACTTGGTGCACTTTGAGCTGAAGCCTG
GGGTCCAAGTTCTTGTCCACGCAGCTCACCTAACAGCAGCCCCCCTGGTGGACCTCACTCCTAC
CCACAGCGGATCTGCCATGCTGATGTTGCTCTCAGTGGTGTTTGTGGGGTTGGCCGTGTTCGTC
ATCTACAAGTTTAAAAGAGGCTGGAGAGATCGCTCAGCGGTCAAGAACATTGGCTGCTCTTGCA
GAGGACCCGGGTTCAATGCTCAGCACCAACAAGGTGGCTCACAGGCATCTGTAACTTCAGTTCC
GAGAGATACGACACCCTCTTCTGACCTCCATGGGCACCAGGAACACACGTGGTGCACAGATTTA
CATCCAGGAAAAACACCAATACACATAAAATGAAAATAAAACGATTTTTATAAAGTACTTAGAG
GCATAAGAAAATTTTTATGAAATGTGAAGAGAGGAATTTAAGACGTCATGGGGTGAAATAATAG
TTTGTATAGAAAGCACAGGGCAGAGAGCATCTCAGCGATAGACTTCTTATTTGGCTAAAACGCA
CAGTGTTCTGATTCAATTCTCCAGTACTGCATATATATTTAAAAATAAAGAAGAAGACTGGATG
GAAATCAAAAAGTATGACCCCTTGCTATTTCTAACTCCCTAAACCATGGATGTTTTAATTCCCT
TCATCTTTAAAATGAACATGTAGTCCTCGTAGACTTGGACTAAACCTATCTTAAATAGGAAACA
AAAGGAATGCTTATAAGGAAATCTATATGCCTATTGAACCCATACCTTAATTATAAACTGTGTA
TATAGTTCCTAGGAAGATCACAATTATTAAAGTGTGTAATTATTCTCTTCGAAAACTAAAAATT
AAACCACTCCGAATGTCATTTTTATCAATTGAAATTCATACTGAGATGAACATATTACTATGCT
GTTTTTGTATCTGTAATCTGTGAACTTTCTGAATATATTCTATTCATTTTTAATTAAATTTTTA
GGTTATCGTGCAAAGTAATGAGTTTCATTTTGACCTTTTCTCACATAGGTGTCATTCTTTGTTA
CCATTTGTTACCCCCACCAACTATAGTAAACTTTCAAGGGTTCAAAATTCTTAAAA

hide sequence

RefSeq Acc Id:

XM_006231522 ⟹ XP_006231584

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,029,786 - 259,535,634 (-)	NCBI
mRatBN7.2	1	249,088,615 - 249,594,424 (-)	NCBI
Rnor_6.0	1	269,973,829 - 270,472,968 (-)	NCBI
Rnor_5.0	1	277,404,996 - 277,912,261 (-)	NCBI

Sequence:

show sequence

GTTGTGGTCCTGAGCGCACACCCTGCCGCCGTCAGCCCAGTGCCTCGCTCCGCTGCCTGCCTTC
GGTTCGGGACCCCCTCTCCGCTCCTCTCCGCTCCAGAGATGGGAAAAGTTGGCGCCGGGGACGG
CTCCTCGGCCGCGCTTAGCGCGCTCCTAACGGGAGCCGGGCTTCTGATGCTCTTAGCCCCTGGC
ATCTGCAGCAGCCTTTCTTGCTGCCCTCCGCAACACCCTAGCTCGACCCCACGCTGGACCCTTA
CCCCAAGAGGCTTTTCTTACCCCGGACCGCTGGGTCGGGCTCCTGCCACGCCCCCGCCCCTCTT
CATGAGACCCCTGTTCGCAGTGGCCCCCGGGGACCGGGCGCTGTTTCTGGAGCGAGCTGGGGGC
AGCAGGGTGTCAGTGGCGACCGCTTCACGCTCTGGCCGTAGGAGACGGAGTGGAATGGATCCTG
AGAAGACTGAACCCGGAGAGGGTACGAGTCGGAGCCGCCGGGACATGCTAAGGGATGGAGGGCA
GCAGGGGCCTGGGACTGGCGCGCGGGACCCGGACAAAGCCACTCGCTTCCGGATGGAGGAGCTG
AGATTGACCAGCACCACATTTGCGCTGACTGGAGACTCGGCACACAACCAAGCTATGGTCCACT
GGTCTGGCCACAACAGCAGCGTGATTCTCATTTTGACAAAGCTCTATGACTATAACCTGGGAAG
CATCACTGAGAGCTCGCTTTGGAGGTCAACCGATTATGGGACAACCTACGAGAAGCTGAATGAT
AAAGTGGGGTTGAAGACCATTTTGAGCTATCTCTATGTGTGCCCAACCAACAAGCGTAAGATTA
TGCTACTCACGGACCCGGAGATTGAGAGCAGTTTGTTGATCAGCTCAGATGAAGGGGCAACCTA
TCAAAAGTACCGGCTCAACTTTTACATCCAGAGTTTGCTTTTCCATCCGAAGCAAGAAGACTGG
ATCCTGGCCTACAGTCAAGACCAAAAGTTATACAGCTCTGCTGAGTTTGGCAGAAGATGGCAGC
TTATCCAGGAAGCAGTGGTACCCAATAGGTTTTACTGGTCTGTGCTGGGGTCGAACAAAGAACC
AGACCTTGTGCATCTCGAGGCCAGGACCGTAGATGGTCACTCCATATACTTAACTTGTCGGATG
CAAAACTGCACTGAAGCCAACAGAAATAAACCTTTCCCAGGATACATTGACCCGGATTCTTTGA
TTGTTCAGGATGATTATGTGTTTGTTCAGCTCACATCAGGAGGAAGACCACATTACTATGTGTC
CTACCGAAGAAACCCATTTGCACAAATGAAACTTCCGAAATATGCTTTGCCCAAGGATATGCAT
GTCATCAGTACGGATGAGAATCAGGTGTTTGCAGCAGTTCAAGAATGGAACCAGAATGACACCT
ACAACCTGTACATCTCAGACACACGCGGGGTCTACTTCACGCTGGCCTTGGAGAACGTGCAGAG
CAGCAGAGGCCCTGAAGGCAATGTCATGATTGACCTTTATGAGGTAGCAGGGATAAAGGGAATG
TTCTTGGCTAACAAGAAGATTGACAACCAAGTGAAGACTTTCATCACTTACAACAAAGGCAGAG
ACTGGCGTTTGCTGCAGGCTCCAGATGCAGATCTAAGGGGGGACCCTGTGCACTGTTTGCTGCC
CTACTGTTCACTACACCTTCATCTCAAAGTTTCTGAGAATCCCTACACATCTGGGATCATTGCC
AGCAGAGACACAGCCCCAAGTATTATAGTTGCATCAGGTAACATAGGCTCTGAGTTGTCAGACA
GCGACATCAGCATGTTTGTATCATCAGATGCAGGGAACACTTGGAGGCAGATTTTTGAAGAAGA
GCACAGCATTTTGTACCTTGATCAAGGGGGAGTCCTGGTTGCTATGAAACACACATCTCTCCCA
ATTCGGCACCTGTGGTTGAGTTTTGATGAAGGGAGGTCTTGGAGCAAATACAGTTTTACATCCA
TTCCACTTTTTGTGGATGGAGTCCTGGGGGAGCCTGGAGAAGAGACACTAATCATGACAGTGTT
TGGACACTTCAGTCATCGTTCTGAGTGGCAGCTGGTCAAAGTGGATTACAAGTCCATTTTTGAC
AGACGCTGTGCTGAAGAAGACTACAGACCCTGGCAGTTACATAGCCAGGGGGAAGCATGCATCA
TGGGAGCCAAGAGGATCTATAAGAAGCGAAAATCTGAGCGCAAGTGTATGCAAGGGACGTATGC
AGGAGCGATGGAGTCTGAGCCTTGTGTGTGTACAGAGGCGGACTTTGACTGTGACTATGGCTAC
GAGAGACATAGTAGTGGACAATGCCTACCAGCATTTTGGTTCAACCCGTCCTCACTGTCAAAAG
ACTGCAGCTTGGGACAGAGTTACCTCAACAGCACTGGGTACAGGAAGGTGGTCTCCAATAACTG
CACGGACGGAGTGAGGGAACAGTACACCGCCAAACCACAGAAGTGTCCAGGGAAGGCCCCTCGT
GGGCTACGGATTGTCACTGCAGATGGGAAACTGACAGCAGAACAGGGGCACAATGTCACTCTCA
TGGTGCAGTTGGAAGAGGGGGATGTACAGCGGACACTCATCCAAGTGGACTTTGGAGATGGCAT
TGCGGTGTCTTATGTCAACCTCAGCTCGATGGAAGACGGAATCAAGCATGTATATCAGAATGTG
GGCATTTTCCGAGTGACCGTGCAGGTGGACAACAGTCTGGGGTCTGACAGCGCCGTCCTGTACT
TACATGTAACTTGTCCCCTGGAACATGTGCACCTGTCCCTTCCTTTTGTCACAACAAAGAACAA
AGAGGTCAACGCAACTGCCGTGCTGTGGCCCAGCCAAGTGGGCACTCTCACTTACGTGTGGTGG
TATGGGAACAACACAGAGCCCCTGATCACCTTGGAGGGCAGCATATCATTCAAGTTTACTTCTG
AAGGAATGAACACTATCACGGTACAGGTCTCAGCTGGGAATGCCATACTGCAAGACACTAAGAC
CATTGCGGTATACGAGGAATTCCGCTCTCTTCGCTTGGCTTTTTCTCCAAACTTGGATGACTAC
AACCCTGACATCCCGGAGTGGAGGAGGGACATCAGCCGAGTAATCAAAAAGTCTCTGGTGGAAG
CCACAGGGATTCCCAGCCAGCATATCCTGGTGGCAGTGTTACCTGGCTTACCCACTGCTGCTGA
GCTCTTTGTTTTGCCCTATCAAGATGGAGCTAGAGAAAACAAAAGGTCCCCAGAGGACCTGGAG
CAGATATCTGAAGTTCTAATCCACAAACTCAACCAAAACTTGGTGCACTTTGAGCTGAAGCCTG
GGGTCCAAGTTCTTGTCCACGCAGCTCACCTAACAGCAGCCCCCCTGGTGGACCTCACTCCTAC
CCACAGCGGATCTGCCATGCTGATGTTGCTCTCAGTGGTGTTTGTGGGGTTGGCCGTGTTCGTC
ATCTACAAGTTTAAAAGGAAGATCCCGGGGATTAATGTTTATGCCCAGATGCAAAATGAGAAAG
AACAAGAGCTGATCAATCCAGTCAGCCACACTGAAAGCAGGCCCACTGCCCCTCACCCTGACCT
CAGGAGGCCTGGCCAGCTTGTAGATGAGAAGGTGGAATCCCATCTCCTAGGAGAGTAGCTTTAA
CCTCCCCTCCCTCCCCTTCTACTCAACCTGGGGACTCATCTCTCCGATTGCAAAGACCAAGACA
AGCCACACCACCT

hide sequence

RefSeq Acc Id:

XM_006231523 ⟹ XP_006231585

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,026,343 - 259,535,634 (-)	NCBI
mRatBN7.2	1	249,085,100 - 249,594,424 (-)	NCBI
Rnor_6.0	1	269,970,262 - 270,472,968 (-)	NCBI
Rnor_5.0	1	277,404,996 - 277,912,261 (-)	NCBI

Sequence:

show sequence

GTTGTGGTCCTGAGCGCACACCCTGCCGCCGTCAGCCCAGTGCCTCGCTCCGCTGCCTGCCTTC
GGTTCGGGACCCCCTCTCCGCTCCTCTCCGCTCCAGAGATGGGAAAAGTTGGCGCCGGGGACGG
CTCCTCGGCCGCGCTTAGCGCGCTCCTAACGGGAGCCGGGCTTCTGATGCTCTTAGCCCCTGGC
ATCTGCAGCAGCCTTTCTTGCTGCCCTCCGCAACACCCTAGCTCGACCCCACGCTGGACCCTTA
CCCCAAGAGGCTTTTCTTACCCCGGACCGCTGGGTCGGGCTCCTGCCACGCCCCCGCCCCTCTT
CATGAGACCCCTGTTCGCAGTGGCCCCCGGGGACCGGGCGCTGTTTCTGGAGCGAGCTGGGGGC
AGCAGGGTGTCAGTGGCGACCGCTTCACGCTCTGGCCGTAGGAGACGGAGTGGAATGGATCCTG
AGAAGACTGAACCCGGAGAGGGTACGAGTCGGAGCCGCCGGGACATGCTAAGGGATGGAGGGCA
GCAGGGGCCTGGGACTGGCGCGCGGGACCCGGACAAAGCCACTCGCTTCCGGATGGAGGAGCTG
AGATTGACCAGCACCACATTTGCGCTGACTGGAGACTCGGCACACAACCAAGCTATGGTCCACT
GGTCTGGCCACAACAGCAGCGTGATTCTCATTTTGACAAAGCTCTATGACTATAACCTGGGAAG
CATCACTGAGAGCTCGCTTTGGAGGTCAACCGATTATGGGACAACCTACGAGAAGCTGAATGAT
AAAGTGGGGTTGAAGACCATTTTGAGCTATCTCTATGTGTGCCCAACCAACAAGCGTAAGATTA
TGCTACTCACGGACCCGGAGATTGAGAGCAGTTTGTTGATCAGCTCAGATGAAGGGGCAACCTA
TCAAAAGTACCGGCTCAACTTTTACATCCAGAGTTTGCTTTTCCATCCGAAGCAAGAAGACTGG
ATCCTGGCCTACAGTCAAGACCAAAAGTTATACAGCTCTGCTGAGTTTGGCAGAAGATGGCAGC
TTATCCAGGAAGCAGTGGTACCCAATAGGTTTTACTGGTCTGTGCTGGGGTCGAACAAAGAACC
AGACCTTGTGCATCTCGAGGCCAGGACCGTAGATGGTCACTCCATATACTTAACTTGTCGGATG
CAAAACTGCACTGAAGCCAACAGAAATAAACCTTTCCCAGGATACATTGACCCGGATTCTTTGA
TTGTTCAGGATGATTATGTGTTTGTTCAGCTCACATCAGGAGGAAGACCACATTACTATGTGTC
CTACCGAAGAAACCCATTTGCACAAATGAAACTTCCGAAATATGCTTTGCCCAAGGATATGCAT
GTCATCAGTACGGATGAGAATCAGGTGTTTGCAGCAGTTCAAGAATGGAACCAGAATGACACCT
ACAACCTGTACATCTCAGACACACGCGGGGTCTACTTCACGCTGGCCTTGGAGAACGTGCAGAG
CAGCAGAGGCCCTGAAGGCAATGTCATGATTGACCTTTATGAGGTAGCAGGGATAAAGGGAATG
TTCTTGGCTAACAAGAAGATTGACAACCAAGTGAAGACTTTCATCACTTACAACAAAGGCAGAG
ACTGGCGTTTGCTGCAGGCTCCAGATGCAGATCTAAGGGGGGACCCTGTGCACTGTTTGCTGCC
CTACTGTTCACTACACCTTCATCTCAAAGTTTCTGAGAATCCCTACACATCTGGGATCATTGCC
AGCAGAGACACAGCCCCAAGTATTATAGTTGCATCAGGTAACATAGGCTCTGAGTTGTCAGACA
GCGACATCAGCATGTTTGTATCATCAGATGCAGGGAACACTTGGAGGCAGATTTTTGAAGAAGA
GCACAGCATTTTGTACCTTGATCAAGGGGGAGTCCTGGTTGCTATGAAACACACATCTCTCCCA
ATTCGGCACCTGTGGTTGAGTTTTGATGAAGGGAGGTCTTGGAGCAAATACAGTTTTACATCCA
TTCCACTTTTTGTGGATGGAGTCCTGGGGGAGCCTGGAGAAGAGACACTAATCATGACAGTGTT
TGGACACTTCAGTCATCGTTCTGAGTGGCAGCTGGTCAAAGTGGATTACAAGTCCATTTTTGAC
AGACGCTGTGCTGAAGAAGACTACAGACCCTGGCAGTTACATAGCCAGGGGGAAGCATGCATCA
TGGGAGCCAAGAGGATCTATAAGAAGCGAAAATCTGAGCGCAAGTGTATGCAAGGGACGTATGC
AGGAGCGATGGAGTCTGAGCCTTGTGTGTGTACAGAGGCGGACTTTGACTGTGACTATGGCTAC
GAGAGACATAGTAGTGGACAATGCCTACCAGCATTTTGGTTCAACCCGTCCTCACTGTCAAAAG
ACTGCAGCTTGGGACAGAGTTACCTCAACAGCACTGGGTACAGGAAGGTGGTCTCCAATAACTG
CACGGACGGAGTGAGGGAACAGTACACCGCCAAACCACAGAAGTGTCCAGGGAAGGCCCCTCGT
GGGCTACGGATTGTCACTGCAGATGGGAAACTGACAGCAGAACAGGGGCACAATGTCACTCTCA
TGGTGCAGTTGGAAGAGGGGGATGTACAGCGGACACTCATCCAAGTGGACTTTGGAGATGGCAT
TGCGGTGTCTTATGTCAACCTCAGCTCGATGGAAGACGGAATCAAGCATGTATATCAGAATGTG
GGCATTTTCCGAGTGACCGTGCAGGTGGACAACAGTCTGGGGTCTGACAGCGCCGTCCTGTACT
TACATGTAACTTGTCCCCTGGAACATGTGCACCTGTCCCTTCCTTTTGTCACAACAAAGAACAA
AGAGGTCAACGCAACTGCCGTGCTGTGGCCCAGCCAAGTGGGCACTCTCACTTACGTGTGGTGG
TATGGGAACAACACAGAGCCCCTGATCACCTTGGAGGGCAGCATATCATTCAAGTTTACTTCTG
AAGGAATGAACACTATCACGGTACAGGTCTCAGCTGGGAATGCCATACTGCAAGACACTAAGAC
CATTGCGGTATACGAGGAATTCCGCTCTCTTCGCTTGGCTTTTTCTCCAAACTTGGATGACTAC
AACCCTGACATCCCGGAGTGGAGGAGGGACATCAGCCGAGTAATCAAAAAGTCTCTGGTGGAAG
CCACAGGGATTCCCAGCCAGCATATCCTGGTGGCAGTGTTACCTGGCTTACCCACTGCTGCTGA
GCTCTTTGTTTTGCCCTATCAAGATGGAGCTAGAGAAAACAAAAGGTCCCCAGAGGACCTGGAG
CAGATATCTGAAGTTCTAATCCACAAACTCAACCAAAACTTGGTGCACTTTGAGCTGAAGCCTG
GGGTCCAAGTTCTTGTCCACGCAGCTCACCTAACAGCAGCCCCCCTGGTGGACCTCACTCCTAC
CCACAGCGGATCTGCCATGCTGATGTTGCTCTCAGTGGTGTTTGTGGGGTTGGCCGTGTTCGTC
ATCTACAAGTTTAAAAGACCAAGACAAGCCACACCACCTTCATCGCCAAAGCGGGGATCTGCTG
GGGCACAATTTGCAATCTAAGGAAAACCCCCAAAGGCTACAGGAGACCTGCTGATCAGAAAAGA
ATTTCGCTCTTGTCAAGTACATCATCCTTCATGACCACTAACTTTGTTTTTTTTTTTTTCTTCT
TCTGTTGTTCTGTTTCCTATTTCGCCAGGAAGTATTTCCATAGTTGCTGAGAATCAAAGCACAA
AAGAAATCCCTACCTATGTAAATGTTTGAATGGAGGACGCCAGTAAAAACAAACAAACAAAAAG
TAAATAAAAATAAAAACAATCAAAATCCAAAATAACAAGTAAACACTCTCACTGCATCGGAACT
TTTAAATTCTTCAGACACAGACAACAAGGGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATAC
TTTGAGAACGTGTTTGGAGGGGCAGTGTACAGGTGCTCTATTTTAATGGAAAACACTCCCCTCC
TTTCTCATCTCCTTTTCTGATCGGTCATGTTTGTAGAAAATTCATAACATATACAGGCCAAGGA
TATCTGCATGTATTTTTGAAAATATTCTTGGCTCTAGATTTAACAGTTCTTTTAGCCCTAGGGG
CTGATGGTGGATTAGCCATCCCCAGCCTCTTCCTAAAACCACAAAGACATGCACAGGATGAAAC
CCTGAGCTGCTTCTCTGTGTTCCTTAGCGTCACATTTCCTTTCTAAGTTAATGTTAGTGGCTCC
GTTGGTCAGCACCGACCACAGGCTGCTTTCTCTCCAGTCTCTGTGGCCGCAGGGACAAAGATGC
TAGTTAAAGATTCATACCCATGGAGGCAGGTTCCATAGCAACAGAAGGGAGGCTGGGAAGCAAA
GCATCTTTGTTTCTTGCTCAACTTTTCTCCTTGCAGCTTTCCCTCTTCCTACCCCCAAGGAATG
TAAAAAAACAAAGACAAAACACAAGTGGGATTTTTTCCCCCAGTACTTACTTGGTACCCTACTT
TCACATTTGATTGTCATCCATGTATGAACATGTTCTCTCGCCATCTTTCAGGTTTTTCTCCTCC
CTGTTCCCCATTATCTTTTGATGCCTCTCTCTTTGTCTGCTCAACTGTGTTGCTAGATTTTGGA
TAGTAAACCTTATACTTCCTAAAACTGGCCCAGCCTACGCCAACCCTTACTCCACTCACAAGTC
TTTAGCTCTATCAATTTTGTACAATCTTAAGCATGCCAGCTCCCCTGCGTTCTAGCCAGGCTGC
GTTCTGCACAGCTGGCAGGCTTCAGTTACATTTCCCCTCTATCTCCTCCCCAAAAACCTTTCTT
TGCCAAATACCTCTGGTTTTCCCACATGGAAACATACACTGAGTGTTAAAGAGTTTTTACATCC
ATAGTATTCCAAACCTGGACATGTGCTTTGGAAAGGAAAGCATAGAGATGAGCAGTGGTGGTTT
GTGCATTAACAAAATCTTATGTGGTCCAATTCTAGAAGATTCTCTTGAGAAAAGTTTTGAAAGT
GTGACTATGGTGGAAGGTAATATCTTCTGTGATAGTTGCTGTTATTTGATATTTCTGCTCTAGA
ATAACCATATTTGTAAAATAAAACTGATTTTAACCTCAAGGAGAAACAGGTTAATGGACTTAAT
ATAAAGAGTATTGAAAAACCTATACAAATCGGTCTTCTCATATATTTGAAAGAGATTTTGACCA
TTTGGGATGATCTCATTGATTCCAAGTATGTACTCGAATCTTCAATTGTCACAGTATTGATGAA
GAAAAATTCAGTATAAATGGAAGGGTAACTGCTTACAGCAAAGTAAGGCTTACCCCTATCATGG
CTTTGAAGCAAAAGAAAACCAGTTTCCCTAGAGGAATCATGCAAGAGGCTCACAAAAAAGGAGC
AGGGCTCCTGCTGAAGTTCTTCTAGTGACTGAGTTCCCCTTCATTACTGTGTACTAAAAAAATC
CCAATCTCAAGTTGGGATGAAAGTGGTAAACCACTTCCAGAACCTACCATCCCTTGGCTATGTC
CCAAAGCCAAGAACAGGGTATTGTCAAGGGCCTTGGTATATCCCAATGATCAGTATGATCCTGG
CTCTTGAATGGCTGATTCAGCGATCAGGTGACTTTGCCTTATATGGCTGAAGCAAAGGGAGAGG
AGGAAAGCTGGTGGTGTCAGAGGTTAATCAAACAGAAAGCTTATGGTCGAAGGTGCCCCATGTC
AATATGGTCAATTTTGCCTGGGGACATAATCAATCAATTCTCAAACTGCCAGGCTTCCTATCTC
ATAGGAAACATCTTCAGTGATTATTCTCTTCAGTTGAAGTCTTCCATATTTAGTCTGGAAGACA
AAAATATTTGGAAACCAAAATAGGTCCATTCAAACCAGCACAGGGAATCCTCAGCGTTGCAGTT
CAATTGATTCTAATTTTAAAAAAAAAAATATTTTAAAAAATGAACAACATTCTTGATCTAGCAC
AGTGCCTTGCCTAGAATAACATTTTGAAAATTTGTTTGTCAATAAAAGGACAATGAGTGGGTGA
AGAGACATGGGGAAGAAGGGTCTGTAAGTCTTCATGTAAAATAGAGATGGGCCTGAAATTCCTG
CCATCTTGGGCAGTACCCAAAGTGGTCAGCTATAGATTCAGCTTCTCCAGTGTCCTCATGTGCC
TTTCCTCAAAGCTCCCTCTCACCTGTAGGTTGGTGAGGCAAGGTACTTCTTAGAGAGGACCTAC
AAGTCCCTATAACCTTGGCTTGTGGATCTCAAAGTGTGATGCCTAAGACAAGATAAGAGTGTCA
CTTACACTTGCTTGAAACGCAGATTCAAACTGGGCTAAAAACAGACCCTGCTATTTTGGAAATT
CTAGGGATCTTTAGTATTATTTTTTGATTATGAATCATGGCTGTCCCAACCAAATGTTTCACCA
AGCCATCCAGGTGATGATGATACCTATGCTCAAGTTTGAGAACCACCACACTAGGCCTTGCAGC
CAAATCCCAACAAGAAAGGAACATTTAGAACCTACAAGTGGGACAGAACCAAGTGCCTACCTCT
CACTAAAAGCAGGTGCAAACACAATGAGGACTTTGGTGGATTTAAGGCCAAAGGAGTGTAGGGA
GGAATCCATAGAAGGTAAGATTCAGGGCAAGCTACAAATTGGATACTGCAACCTCTCTTAAATG
TCCAAAGGGCAAACCGTACATGCTCTACCCTCAACTTCCCACTAACGTCGTTTCCCCCCTTGCC
TCATTCTAATTGGATTCGAGGTCCAAATTGCAGAGGTTTGCTTTGCTTTTTCCTCAGAAGTTCC
AAACAGCAACTTTGAAAGCAATGGGGTGCTTGGCAGCAGCCGTTGTGTGTTGTCCCGGATCCCA
GCTGAGCATTGAGACCCCTTCATTTGCCAACTTCTTTTTATAGGAAGCCAATTAAAAAAACATA
TGAAAGTTTTCTTATAGGATTGGAACTACTTCTAATTTTAAAATGACTTTTTTGATGTATTTTT
TTGTTAAATACTATGTAGTGTAATGTATAATTGCTCTTGTTTATTGCTTTTACAATCATATTTA
TTAAACAGATAATGTCTCTAAA

hide sequence

RefSeq Acc Id:

XM_006231525 ⟹ XP_006231587

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,026,343 - 259,535,723 (-)	NCBI
mRatBN7.2	1	249,085,100 - 249,594,520 (-)	NCBI
Rnor_6.0	1	269,970,262 - 270,473,097 (-)	NCBI
Rnor_5.0	1	277,404,996 - 277,912,261 (-)	NCBI

Sequence:

show sequence

CGGCGGCGGCGGCGGTGGCTCGCAGCTCCGTCCCAACCCGCGCGCTCCTCACAAGCCCAGCCTG
GGCGAGCGGCAGGCACCTGCCCGGCGCCGCCTCCGCGCGCCCCGCCGCCGCCCAACTTGGATGG
AGTTGTGGTCCTGAGCGCACACCCTGCCGCCGTCAGCCCAGTGCCTCGCTCCGCTGCCTGCCTT
CGGTTCGGGACCCCCTCTCCGCTCCTCTCCGCTCCAGAGATGGGAAAAGTTGGCGCCGGGGACG
GCTCCTCGGCCGCGCTTAGCGCGCTCCTAACGGGAGCCGGGCTTCTGATGCTCTTAGCCCCTGG
CATCTGCAGCAGCCTTTCTTGCTGCCCTCCGCAACACCCTAGCTCGACCCCACGCTGGACCCTT
ACCCCAAGAGGCTTTTCTTACCCCGGACCGCTGGGTCGGGCTCCTGCCACGCCCCCGCCCCTCT
TCATGAGACCCCTGTTCGCAGTGGCCCCCGGGGACCGGGCGCTGTTTCTGGAGCGAGCTGGGGG
CAGCAGGGTGTCAGTGGCGACCGCTTCACGCTCTGGCCGTAGGAGACGGAGTGGAATGGATCCT
GAGAAGACTGAACCCGGAGAGGGTACGAGTCGGAGCCGCCGGGACATGCTAAGGGATGGAGGGC
AGCAGGGGCCTGGGACTGGCGCGCGGGACCCGGACAAAGCCACTCGCTTCCGGATGGAGGAGCT
GAGATTGACCAGCACCACATTTGCGCTGACTGGAGACTCGGCACACAACCAAGCTATGGTCCAC
TGGTCTGGCCACAACAGCAGCGTGATTCTCATTTTGACAAAGCTCTATGACTATAACCTGGGAA
GCATCACTGAGAGCTCGCTTTGGAGGTCAACCGATTATGGGACAACCTACGAGAAGCTGAATGA
TAAAGTGGGGTTGAAGACCATTTTGAGCTATCTCTATGTGTGCCCAACCAACAAGCGTAAGATT
ATGCTACTCACGGACCCGGAGATTGAGAGCAGTTTGTTGATCAGCTCAGATGAAGGGGCAACCT
ATCAAAAGTACCGGCTCAACTTTTACATCCAGAGTTTGCTTTTCCATCCGAAGCAAGAAGACTG
GATCCTGGCCTACAGTCAAGACCAAAAGTTATACAGCTCTGCTGAGTTTGGCAGAAGATGGCAG
CTTATCCAGGAAGCAGTGGTACCCAATAGGTTTTACTGGTCTGTGCTGGGGTCGAACAAAGAAC
CAGACCTTGTGCATCTCGAGGCCAGGACCGTAGATGGTCACTCCATATACTTAACTTGTCGGAT
GCAAAACTGCACTGAAGCCAACAGAAATAAACCTTTCCCAGGATACATTGACCCGGATTCTTTG
ATTGTTCAGGATGATTATGTGTTTGTTCAGCTCACATCAGGAGGAAGACCACATTACTATGTGT
CCTACCGAAGAAACCCATTTGCACAAATGAAACTTCCGAAATATGCTTTGCCCAAGGATATGCA
TGTCATCAGTACGGATGAGAATCAGGTGTTTGCAGCAGTTCAAGAATGGAACCAGAATGACACC
TACAACCTGTACATCTCAGACACACGCGGGGTCTACTTCACGCTGGCCTTGGAGAACGTGCAGA
GCAGCAGAGGCCCTGAAGGCAATGTCATGATTGACCTTTATGAGGTAGCAGGGATAAAGGGAAT
GTTCTTGGCTAACAAGAAGATTGACAACCAAGTGAAGACTTTCATCACTTACAACAAAGGCAGA
GACTGGCGTTTGCTGCAGGCTCCAGATGCAGATCTAAGGGGGGACCCTGTGCACTGTTTGCTGC
CCTACTGTTCACTACACCTTCATCTCAAAGTTTCTGAGAATCCCTACACATCTGGGATCATTGC
CAGCAGAGACACAGCCCCAAGTATTATAGTTGCATCAGGTAACATAGGCTCTGAGTTGTCAGAC
AGCGACATCAGCATGTTTGTATCATCAGATGCAGGGAACACTTGGAGGCAGATTTTTGAAGAAG
AGCACAGCATTTTGTACCTTGATCAAGGGGGAGTCCTGGTTGCTATGAAACACACATCTCTCCC
AATTCGGCACCTGTGGTTGAGTTTTGATGAAGGGAGGTCTTGGAGCAAATACAGTTTTACATCC
ATTCCACTTTTTGTGGATGGAGTCCTGGGGGAGCCTGGAGAAGAGACACTAATCATGACAGTGT
TTGGACACTTCAGTCATCGTTCTGAGTGGCAGCTGGTCAAAGTGGATTACAAGTCCATTTTTGA
CAGACGCTGTGCTGAAGAAGACTACAGACCCTGGCAGTTACATAGCCAGGGGGAAGCATGCATC
ATGGGAGCCAAGAGGATCTATAAGAAGCGAAAATCTGAGCGCAAGTGTATGCAAGGGACGTATG
CAGGAGCGATGGAGTCTGAGCCTTGTGTGTGTACAGAGGCGGACTTTGACTGTGACTATGGCTA
CGAGAGACATAGTAGTGGACAATGCCTACCAGCATTTTGGTTCAACCCGTCCTCACTGTCAAAA
GACTGCAGCTTGGGACAGAGTTACCTCAACAGCACTGGGTACAGGAAGGTGGTCTCCAATAACT
GCACGGACGGAGTGAGGGAACAGTACACCGCCAAACCACAGAAGTGTCCAGGGAAGGCCCCTCG
TGGGCTACGGATTGTCACTGCAGATGGGAAACTGACAGCAGAACAGGGGCACAATGTCACTCTC
ATGGTGCAGTTGGAAGAGGGGGATGTACAGCGGACACTCATCCAAGTGGACTTTGGAGATGGCA
TTGCGGTGTCTTATGTCAACCTCAGCTCGATGGAAGACGGAATCAAGCATGTATATCAGAATGT
GGGCATTTTCCGAGTGACCGTGCAGGTGGACAACAGTCTGGGGTCTGACAGCGCCGTCCTGTAC
TTACATGTAACTTGTCCCCTGGAACATGTGCACCTGTCCCTTCCTTTTGTCACAACAAAGAACA
AAGAGGTCAACGCAACTGCCGTGCTGTGGCCCAGCCAAGTGGGCACTCTCACTTACGTGTGGTG
GTATGGGAACAACACAGAGCCCCTGATCACCTTGGAGGGCAGCATATCATTCAAGTTTACTTCT
GAAGGAATGAACACTATCACGGTACAGGTCTCAGCTGGGAATGCCATACTGCAAGACACTAAGA
CCATTGCGGTATACGAGGAATTCCGCTCTCTTCGCTTGGCTTTTTCTCCAAACTTGGATGACTA
CAACCCTGACATCCCGGAGTGGAGGAGGGACATCAGCCGAGTAATCAAAAAGTCTCTGGTGGAA
GCCACAGGGATTCCCAGCCAGCATATCCTGGTGGCAGTGTTACCTGGCTTACCCACTGCTGCTG
AGCTCTTTGTTTTGCCCTATCAAGATGGAGCTAGAGAAAACAAAAGGTCCCCAGAGGACCTGGA
GCAGATATCTGAAGTTCTAATCCACAAACTCAACCAAAACTTGGTGCACTTTGAGCTGAAGCCT
GGGGTCCAAGTTCTTGTCCACGCAGCTCACCTAACAGCAGCCCCCCTGGTGGACCTCACTCCTA
CCCACAGCGGATCTGCCATGCTGATGTTGCTCTCAGTGGTGTTTGTGGGGTTGGCCGTGTTCGT
CATCTACAAGTTTAAAAGGAAGATCCCGGGGATTAATGTTTATGCCCAGATGCAAAATGAGAAA
GAACAAGAGCTGATCAATCCAGTCAGCCACACTGAAAGCAGGCCCACTGCCCCTCACCCTGACC
TCAGGAGGCCTGGCCAGCTTGTAGATGAGAAGGTGGAATCCCATCTCCTAGACCAAGACAAGCC
ACACCACCTTCATCGCCAAAGCGGGGATCTGCTGGGGCACAATTTGCAATCTAAGGAAAACCCC
CAAAGGCTACAGGAGACCTGCTGATCAGAAAAGAATTTCGCTCTTGTCAAGTACATCATCCTTC
ATGACCACTAACTTTGTTTTTTTTTTTTTCTTCTTCTGTTGTTCTGTTTCCTATTTCGCCAGGA
AGTATTTCCATAGTTGCTGAGAATCAAAGCACAAAAGAAATCCCTACCTATGTAAATGTTTGAA
TGGAGGACGCCAGTAAAAACAAACAAACAAAAAGTAAATAAAAATAAAAACAATCAAAATCCAA
AATAACAAGTAAACACTCTCACTGCATCGGAACTTTTAAATTCTTCAGACACAGACAACAAGGG
TTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTTTGAGAACGTGTTTGGAGGGGCAGTGTAC
AGGTGCTCTATTTTAATGGAAAACACTCCCCTCCTTTCTCATCTCCTTTTCTGATCGGTCATGT
TTGTAGAAAATTCATAACATATACAGGCCAAGGATATCTGCATGTATTTTTGAAAATATTCTTG
GCTCTAGATTTAACAGTTCTTTTAGCCCTAGGGGCTGATGGTGGATTAGCCATCCCCAGCCTCT
TCCTAAAACCACAAAGACATGCACAGGATGAAACCCTGAGCTGCTTCTCTGTGTTCCTTAGCGT
CACATTTCCTTTCTAAGTTAATGTTAGTGGCTCCGTTGGTCAGCACCGACCACAGGCTGCTTTC
TCTCCAGTCTCTGTGGCCGCAGGGACAAAGATGCTAGTTAAAGATTCATACCCATGGAGGCAGG
TTCCATAGCAACAGAAGGGAGGCTGGGAAGCAAAGCATCTTTGTTTCTTGCTCAACTTTTCTCC
TTGCAGCTTTCCCTCTTCCTACCCCCAAGGAATGTAAAAAAACAAAGACAAAACACAAGTGGGA
TTTTTTCCCCCAGTACTTACTTGGTACCCTACTTTCACATTTGATTGTCATCCATGTATGAACA
TGTTCTCTCGCCATCTTTCAGGTTTTTCTCCTCCCTGTTCCCCATTATCTTTTGATGCCTCTCT
CTTTGTCTGCTCAACTGTGTTGCTAGATTTTGGATAGTAAACCTTATACTTCCTAAAACTGGCC
CAGCCTACGCCAACCCTTACTCCACTCACAAGTCTTTAGCTCTATCAATTTTGTACAATCTTAA
GCATGCCAGCTCCCCTGCGTTCTAGCCAGGCTGCGTTCTGCACAGCTGGCAGGCTTCAGTTACA
TTTCCCCTCTATCTCCTCCCCAAAAACCTTTCTTTGCCAAATACCTCTGGTTTTCCCACATGGA
AACATACACTGAGTGTTAAAGAGTTTTTACATCCATAGTATTCCAAACCTGGACATGTGCTTTG
GAAAGGAAAGCATAGAGATGAGCAGTGGTGGTTTGTGCATTAACAAAATCTTATGTGGTCCAAT
TCTAGAAGATTCTCTTGAGAAAAGTTTTGAAAGTGTGACTATGGTGGAAGGTAATATCTTCTGT
GATAGTTGCTGTTATTTGATATTTCTGCTCTAGAATAACCATATTTGTAAAATAAAACTGATTT
TAACCTCAAGGAGAAACAGGTTAATGGACTTAATATAAAGAGTATTGAAAAACCTATACAAATC
GGTCTTCTCATATATTTGAAAGAGATTTTGACCATTTGGGATGATCTCATTGATTCCAAGTATG
TACTCGAATCTTCAATTGTCACAGTATTGATGAAGAAAAATTCAGTATAAATGGAAGGGTAACT
GCTTACAGCAAAGTAAGGCTTACCCCTATCATGGCTTTGAAGCAAAAGAAAACCAGTTTCCCTA
GAGGAATCATGCAAGAGGCTCACAAAAAAGGAGCAGGGCTCCTGCTGAAGTTCTTCTAGTGACT
GAGTTCCCCTTCATTACTGTGTACTAAAAAAATCCCAATCTCAAGTTGGGATGAAAGTGGTAAA
CCACTTCCAGAACCTACCATCCCTTGGCTATGTCCCAAAGCCAAGAACAGGGTATTGTCAAGGG
CCTTGGTATATCCCAATGATCAGTATGATCCTGGCTCTTGAATGGCTGATTCAGCGATCAGGTG
ACTTTGCCTTATATGGCTGAAGCAAAGGGAGAGGAGGAAAGCTGGTGGTGTCAGAGGTTAATCA
AACAGAAAGCTTATGGTCGAAGGTGCCCCATGTCAATATGGTCAATTTTGCCTGGGGACATAAT
CAATCAATTCTCAAACTGCCAGGCTTCCTATCTCATAGGAAACATCTTCAGTGATTATTCTCTT
CAGTTGAAGTCTTCCATATTTAGTCTGGAAGACAAAAATATTTGGAAACCAAAATAGGTCCATT
CAAACCAGCACAGGGAATCCTCAGCGTTGCAGTTCAATTGATTCTAATTTTAAAAAAAAAAATA
TTTTAAAAAATGAACAACATTCTTGATCTAGCACAGTGCCTTGCCTAGAATAACATTTTGAAAA
TTTGTTTGTCAATAAAAGGACAATGAGTGGGTGAAGAGACATGGGGAAGAAGGGTCTGTAAGTC
TTCATGTAAAATAGAGATGGGCCTGAAATTCCTGCCATCTTGGGCAGTACCCAAAGTGGTCAGC
TATAGATTCAGCTTCTCCAGTGTCCTCATGTGCCTTTCCTCAAAGCTCCCTCTCACCTGTAGGT
TGGTGAGGCAAGGTACTTCTTAGAGAGGACCTACAAGTCCCTATAACCTTGGCTTGTGGATCTC
AAAGTGTGATGCCTAAGACAAGATAAGAGTGTCACTTACACTTGCTTGAAACGCAGATTCAAAC
TGGGCTAAAAACAGACCCTGCTATTTTGGAAATTCTAGGGATCTTTAGTATTATTTTTTGATTA
TGAATCATGGCTGTCCCAACCAAATGTTTCACCAAGCCATCCAGGTGATGATGATACCTATGCT
CAAGTTTGAGAACCACCACACTAGGCCTTGCAGCCAAATCCCAACAAGAAAGGAACATTTAGAA
CCTACAAGTGGGACAGAACCAAGTGCCTACCTCTCACTAAAAGCAGGTGCAAACACAATGAGGA
CTTTGGTGGATTTAAGGCCAAAGGAGTGTAGGGAGGAATCCATAGAAGGTAAGATTCAGGGCAA
GCTACAAATTGGATACTGCAACCTCTCTTAAATGTCCAAAGGGCAAACCGTACATGCTCTACCC
TCAACTTCCCACTAACGTCGTTTCCCCCCTTGCCTCATTCTAATTGGATTCGAGGTCCAAATTG
CAGAGGTTTGCTTTGCTTTTTCCTCAGAAGTTCCAAACAGCAACTTTGAAAGCAATGGGGTGCT
TGGCAGCAGCCGTTGTGTGTTGTCCCGGATCCCAGCTGAGCATTGAGACCCCTTCATTTGCCAA
CTTCTTTTTATAGGAAGCCAATTAAAAAAACATATGAAAGTTTTCTTATAGGATTGGAACTACT
TCTAATTTTAAAATGACTTTTTTGATGTATTTTTTTGTTAAATACTATGTAGTGTAATGTATAA
TTGCTCTTGTTTATTGCTTTTACAATCATATTTATTAAACAGATAATGTCTCTAAA

hide sequence

RefSeq Acc Id:

XM_039080712 ⟹ XP_038936640

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,026,343 - 259,535,634 (-)	NCBI
mRatBN7.2	1	249,085,100 - 249,594,424 (-)	NCBI

RefSeq Acc Id:

XM_039080717 ⟹ XP_038936645

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,026,343 - 259,426,479 (-)	NCBI
mRatBN7.2	1	249,085,100 - 249,485,297 (-)	NCBI

RefSeq Acc Id:

XM_039080722 ⟹ XP_038936650

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,026,343 - 259,137,681 (-)	NCBI
mRatBN7.2	1	249,085,100 - 249,198,037 (-)	NCBI

RefSeq Acc Id:

XM_039080727 ⟹ XP_038936655

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,026,343 - 259,140,298 (-)	NCBI
mRatBN7.2	1	249,085,100 - 249,199,057 (-)	NCBI

RefSeq Acc Id:

XM_063265314 ⟹ XP_063121384

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	259,026,343 - 259,535,634 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178492	(Get FASTA)	NCBI Sequence Viewer
	NP_001425005	(Get FASTA)	NCBI Sequence Viewer
	NP_001425006	(Get FASTA)	NCBI Sequence Viewer
	XP_006231581	(Get FASTA)	NCBI Sequence Viewer
	XP_006231582	(Get FASTA)	NCBI Sequence Viewer
	XP_006231583	(Get FASTA)	NCBI Sequence Viewer
	XP_006231584	(Get FASTA)	NCBI Sequence Viewer
	XP_006231585	(Get FASTA)	NCBI Sequence Viewer
	XP_006231587	(Get FASTA)	NCBI Sequence Viewer
	XP_038936640	(Get FASTA)	NCBI Sequence Viewer
	XP_038936645	(Get FASTA)	NCBI Sequence Viewer
	XP_038936650	(Get FASTA)	NCBI Sequence Viewer
	XP_038936655	(Get FASTA)	NCBI Sequence Viewer
	XP_063121384	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL94401	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000015979
	ENSRNOP00000015979.4
	ENSRNOP00000078816
	ENSRNOP00000078816.1
	ENSRNOP00000090827
	ENSRNOP00000090827.2
	ENSRNOP00000091270
	ENSRNOP00000091270.2

RefSeq Acc Id:	NP_001178492 ⟸ NM_001191563
- Peptide Label:	precursor
- UniProtKB:	F1LUZ4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKVGAGDGSSAALSALLTGAGLLMLLAPGICSSLSCCPPQHPSSTPRWTLTPRGFSYPGPLGR APATPPPLFMRPLFAVAPGDRALFLERAGGSRVSVATASRSGRRRRSGMDPEKTEPGEGTSRSR RDMLRDGGQQGPGTGARDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHWSGHNSSVILILT KLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEIESSLL ISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSAEFGRRWQLIQEAVVPNRFYW SVLGSNKEPDLVHLEARTVDGHSIYLTCRMQNCTEANRNKPFPGYIDPDSLIVQDDYVFVQLTS GGRPHYYVSYRRNPFAQMKLPKYALPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYF TLALENVQSSRGPEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWRLLQAPDADLR GDPVHCLLPYCSLHLHLKVSENPYTSGIIASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGN TWRQIFEEEHSILYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPG EETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSE RKCMQGTYAGAMESEPCVCTEADFDCDYGYERHSSGQCLPAFWFNPSSLSKDCSLGQSYLNSTG YRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTL IQVDFGDGIAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLS LPFVTTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHILVAV LPGLPTAAELFVLPYQDGARENKRSPEDLEQISEVLIHKLNQNLVHFELKPGVQVLVHAAHLTA APLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRRVALTSPPSPSTQPGDSSLRLQRPRQAT PPSSPKRGSAGAQFAI hide sequence

RefSeq Acc Id:

XP_006231583 ⟸ XM_006231521

- Peptide Label:

isoform X3

- Sequence:

show sequence

MGKVGAGDGSSAALSALLTGAGLLMLLAPGICSSLSCCPPQHPSSTPRWTLTPRGFSYPGPLGR
APATPPPLFMRPLFAVAPGDRALFLERAGGSRVSVATASRSGRRRRSGMDPEKTEPGEGTSRSR
RDMLRDGGQQGPGTGARDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHWSGHNSSVILILT
KLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEIESSLL
ISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSAEFGRRWQLIQEAVVPNRFYW
SVLGSNKEPDLVHLEARTVDGHSIYLTCRMQNCTEANRNKPFPGYIDPDSLIVQDDYVFVQLTS
GGRPHYYVSYRRNPFAQMKLPKYALPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYF
TLALENVQSSRGPEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWRLLQAPDADLR
GDPVHCLLPYCSLHLHLKVSENPYTSGIIASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGN
TWRQIFEEEHSILYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPG
EETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSE
RKCMQGTYAGAMESEPCVCTEADFDCDYGYERHSSGQCLPAFWFNPSSLSKDCSLGQSYLNSTG
YRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTL
IQVDFGDGIAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLS
LPFVTTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHILVAV
LPGLPTAAELFVLPYQDGARENKRSPEDLEQISEVLIHKLNQNLVHFELKPGVQVLVHAAHLTA
APLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRGWRDRSAVKNIGCSCRGPGFNAQHQQGG
SQASVTSVPRDTTPSSDLHGHQEHTWCTDLHPGKTPIHIK

hide sequence

RefSeq Acc Id:	XP_006231581 ⟸ XM_006231519
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AEA1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKVGAGDGSSAALSALLTGAGLLMLLAPGICSSLSCCPPQHPSSTPRWTLTPRGFSYPGPLGR APATPPPLFMRPLFAVAPGDRALFLERAGGSRVSVATASRSGRRRRSGMDPEKTEPGEGTSRSR RDMLRDGGQQGPGTGARDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHWSGHNSSVILILT KLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEIESSLL ISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSAEFGRRWQLIQEAVVPNRFYW SVLGSNKEPDLVHLEARTVDGHSIYLTCRMQNCTEANRNKPFPGYIDPDSLIVQDDYVFVQLTS GGRPHYYVSYRRNPFAQMKLPKYALPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYF TLALENVQSSRGPEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWRLLQAPDADLR GDPVHCLLPYCSLHLHLKVSENPYTSGIIASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGN TWRQIFEEEHSILYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPG EETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSE RKCMQGTYAGAMESEPCVCTEADFDCDYGYERHSSGQCLPAFWFNPSSLSKDCSLGQSYLNSTG YRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTL IQVDFGDGIAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLS LPFVTTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHILVAV LPGLPTAAELFVLPYQDGARENKRSPEDLEQISEVLIHKLNQNLVHFELKPGVQVLVHAAHLTA APLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINVYAQMQNEKEQELINPVSHTES RPTAPHPDLRRPGQLVDEKVESHLLEAGEIAQRSRTLAALAEDPGSMLSTNKVAHRHL hide sequence

RefSeq Acc Id:

XP_006231587 ⟸ XM_006231525

- Peptide Label:

isoform X7

- Sequence:

show sequence

MGKVGAGDGSSAALSALLTGAGLLMLLAPGICSSLSCCPPQHPSSTPRWTLTPRGFSYPGPLGR
APATPPPLFMRPLFAVAPGDRALFLERAGGSRVSVATASRSGRRRRSGMDPEKTEPGEGTSRSR
RDMLRDGGQQGPGTGARDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHWSGHNSSVILILT
KLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEIESSLL
ISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSAEFGRRWQLIQEAVVPNRFYW
SVLGSNKEPDLVHLEARTVDGHSIYLTCRMQNCTEANRNKPFPGYIDPDSLIVQDDYVFVQLTS
GGRPHYYVSYRRNPFAQMKLPKYALPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYF
TLALENVQSSRGPEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWRLLQAPDADLR
GDPVHCLLPYCSLHLHLKVSENPYTSGIIASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGN
TWRQIFEEEHSILYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPG
EETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSE
RKCMQGTYAGAMESEPCVCTEADFDCDYGYERHSSGQCLPAFWFNPSSLSKDCSLGQSYLNSTG
YRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTL
IQVDFGDGIAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLS
LPFVTTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHILVAV
LPGLPTAAELFVLPYQDGARENKRSPEDLEQISEVLIHKLNQNLVHFELKPGVQVLVHAAHLTA
APLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINVYAQMQNEKEQELINPVSHTES
RPTAPHPDLRRPGQLVDEKVESHLLDQDKPHHLHRQSGDLLGHNLQSKENPQRLQETC

hide sequence

RefSeq Acc Id:

XP_006231585 ⟸ XM_006231523

- Peptide Label:

isoform X5

- Sequence:

show sequence

MGKVGAGDGSSAALSALLTGAGLLMLLAPGICSSLSCCPPQHPSSTPRWTLTPRGFSYPGPLGR
APATPPPLFMRPLFAVAPGDRALFLERAGGSRVSVATASRSGRRRRSGMDPEKTEPGEGTSRSR
RDMLRDGGQQGPGTGARDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHWSGHNSSVILILT
KLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEIESSLL
ISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSAEFGRRWQLIQEAVVPNRFYW
SVLGSNKEPDLVHLEARTVDGHSIYLTCRMQNCTEANRNKPFPGYIDPDSLIVQDDYVFVQLTS
GGRPHYYVSYRRNPFAQMKLPKYALPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYF
TLALENVQSSRGPEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWRLLQAPDADLR
GDPVHCLLPYCSLHLHLKVSENPYTSGIIASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGN
TWRQIFEEEHSILYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPG
EETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSE
RKCMQGTYAGAMESEPCVCTEADFDCDYGYERHSSGQCLPAFWFNPSSLSKDCSLGQSYLNSTG
YRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTL
IQVDFGDGIAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLS
LPFVTTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHILVAV
LPGLPTAAELFVLPYQDGARENKRSPEDLEQISEVLIHKLNQNLVHFELKPGVQVLVHAAHLTA
APLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRPRQATPPSSPKRGSAGAQFAI

hide sequence

RefSeq Acc Id:

XP_006231582 ⟸ XM_006231520

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGKVGAGDGSSAALSALLTGAGLLMLLAPGICSSLSCCPPQHPSSTPRWTLTPRGFSYPGPLGR
APATPPPLFMRPLFAVAPGDRALFLERAGGSRVSVATASRSGRRRRSGMDPEKTEPGEGTSRSR
RDMLRDGGQQGPGTGARDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHWSGHNSSVILILT
KLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEIESSLL
ISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSAEFGRRWQLIQEAVVPNRFYW
SVLGSNKEPDLVHLEARTVDGHSIYLTCRMQNCTEANRNKPFPGYIDPDSLIVQDDYVFVQLTS
GGRPHYYVSYRRNPFAQMKLPKYALPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYF
TLALENVQSSRGPEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWRLLQAPDADLR
GDPVHCLLPYCSLHLHLKVSENPYTSGIIASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGN
TWRQIFEEEHSILYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPG
EETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSE
RKCMQGTYAGAMESEPCVCTEADFDCDYGYERHSSGQCLPAFWFNPSSLSKDCSLGQSYLNSTG
YRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTL
IQVDFGDGIAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLS
LPFVTTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHILVAV
LPGLPTAAELFVLPYQDGARENKRSPEDLEQISEVLIHKLNQNLVHFELKPGVQVLVHAAHLTA
APLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINVYAQMQNEKEQELINPVSHTES
RPTAPHPDLRRPGQLVDEKVESHLLGSISIVAENQSTKEIPTYVNV

hide sequence

RefSeq Acc Id:	XP_006231584 ⟸ XM_006231522
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AF53 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKVGAGDGSSAALSALLTGAGLLMLLAPGICSSLSCCPPQHPSSTPRWTLTPRGFSYPGPLGR APATPPPLFMRPLFAVAPGDRALFLERAGGSRVSVATASRSGRRRRSGMDPEKTEPGEGTSRSR RDMLRDGGQQGPGTGARDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHWSGHNSSVILILT KLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEIESSLL ISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSAEFGRRWQLIQEAVVPNRFYW SVLGSNKEPDLVHLEARTVDGHSIYLTCRMQNCTEANRNKPFPGYIDPDSLIVQDDYVFVQLTS GGRPHYYVSYRRNPFAQMKLPKYALPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYF TLALENVQSSRGPEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWRLLQAPDADLR GDPVHCLLPYCSLHLHLKVSENPYTSGIIASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGN TWRQIFEEEHSILYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPG EETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSE RKCMQGTYAGAMESEPCVCTEADFDCDYGYERHSSGQCLPAFWFNPSSLSKDCSLGQSYLNSTG YRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTL IQVDFGDGIAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLS LPFVTTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHILVAV LPGLPTAAELFVLPYQDGARENKRSPEDLEQISEVLIHKLNQNLVHFELKPGVQVLVHAAHLTA APLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINVYAQMQNEKEQELINPVSHTES RPTAPHPDLRRPGQLVDEKVESHLLGE hide sequence

Ensembl Acc Id:

ENSRNOP00000015979 ⟸ ENSRNOT00000015979

RefSeq Acc Id:	XP_038936640 ⟸ XM_039080712
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038936645 ⟸ XM_039080717
- Peptide Label:	isoform X8
- UniProtKB:	A6JHS6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936655 ⟸ XM_039080727
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_038936650 ⟸ XM_039080722
- Peptide Label:	isoform X9

Ensembl Acc Id:

ENSRNOP00000090827 ⟸ ENSRNOT00000099121

Ensembl Acc Id:

ENSRNOP00000078816 ⟸ ENSRNOT00000108738

Ensembl Acc Id:

ENSRNOP00000091270 ⟸ ENSRNOT00000098704

RefSeq Acc Id:	XP_063121384 ⟸ XM_063265314
- Peptide Label:	isoform X11

Protein Domains

PKD

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1LUZ4-F1-model_v2	AlphaFold	F1LUZ4	1-1168	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305910	AgrOrtholog
BioCyc Gene	G2FUF-55424	BioCyc
Ensembl Genes	ENSRNOG00000011313	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000015979	ENTREZGENE
	ENSRNOT00000015979.6	UniProtKB/TrEMBL
	ENSRNOT00000098704	ENTREZGENE
	ENSRNOT00000098704.2	UniProtKB/TrEMBL
	ENSRNOT00000099121	ENTREZGENE
	ENSRNOT00000099121.2	UniProtKB/TrEMBL
	ENSRNOT00000108738	ENTREZGENE
	ENSRNOT00000108738.2	UniProtKB/TrEMBL
Gene3D-CATH	2.10.70.80	UniProtKB/TrEMBL
	2.120.10.10	UniProtKB/TrEMBL
	2.130.10.10	UniProtKB/TrEMBL
	2.60.40.10	UniProtKB/TrEMBL
	3.30.60.270	UniProtKB/TrEMBL
InterPro	Ig-like_fold	UniProtKB/TrEMBL
	PKD_dom	UniProtKB/TrEMBL
	PKD_dom_sf	UniProtKB/TrEMBL
	Sortilin_C	UniProtKB/TrEMBL
	Sortilin_N	UniProtKB/TrEMBL
	VPS10	UniProtKB/TrEMBL
	VPS10-sortilin	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom	UniProtKB/TrEMBL
KEGG Report	rno:309533	UniProtKB/TrEMBL
NCBI Gene	309533	ENTREZGENE
PANTHER	SORTILIN RELATED	UniProtKB/TrEMBL
	VPS10 DOMAIN-CONTAINING RECEPTOR SORCS1	UniProtKB/TrEMBL
Pfam	PKD	UniProtKB/TrEMBL
	Sortilin-Vps10	UniProtKB/TrEMBL
	Sortilin_C	UniProtKB/TrEMBL
PhenoGen	Sorcs1	PhenoGen
PROSITE	PKD	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000011313	RatGTEx
SMART	VPS10	UniProtKB/TrEMBL
Superfamily-SCOP	Oligoxyloglucan reducing end-specific cellobiohydrolase	UniProtKB/TrEMBL
	PKD	UniProtKB/TrEMBL
UniProt	A0A8I5ZLQ5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AEA1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AF53	ENTREZGENE, UniProtKB/TrEMBL
	A6JHS6	ENTREZGENE, UniProtKB/TrEMBL
	F1LUZ4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-09-18	Sorcs1	sortilin-related VPS10 domain containing receptor 1	Sorcs1	VPS10 domain receptor protein SORCS 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Sorcs1	VPS10 domain receptor protein SORCS 1	Sorcs1_predicted	VPS10 domain receptor protein SORCS 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Sorcs1_predicted	VPS10 domain receptor protein SORCS 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar