Il15ra (interleukin 15 receptor subunit alpha) - Rat Genome Database

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Gene: Il15ra (interleukin 15 receptor subunit alpha) Rattus norvegicus
Analyze
Symbol: Il15ra
Name: interleukin 15 receptor subunit alpha
RGD ID: 1305149
Description: Predicted to enable interleukin-15 receptor activity and protein kinase binding activity. Involved in cell surface receptor signaling pathway via JAK-STAT; negative regulation of neuron projection development; and response to nutrient levels. Predicted to be located in cell surface and cytoplasmic vesicle. Orthologous to human IL15RA (interleukin 15 receptor subunit alpha); PARTICIPATES IN Jak-Stat signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; atrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: interleukin 15 receptor alpha chain; interleukin 15 receptor, alpha; interleukin 15 receptor, alpha chain; interleukin-15 receptor alpha chain; interleukin-15 receptor subunit alpha; LOC364775; LOC502145; LOC690369; similar to Interleukin-15 receptor alpha chain precursor (IL-15R-alpha) (IL-15RA)
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81771,712,141 - 71,742,072 (-)NCBIGRCr8
mRatBN7.21766,802,300 - 66,831,973 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1766,802,334 - 66,832,278 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01770,451,861 - 70,481,838 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1770,451,411 - 70,481,750 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01772,155,863 - 72,185,368 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41777,998,621 - 78,029,657 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11778,009,453 - 78,026,168 (-)NCBI
Celera1766,307,417 - 66,337,085 (-)NCBICelera
Cytogenetic Map17q12.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Cell-specific interleukin-15 and interleukin-15 receptor subunit expression and regulation in pneumococcal pneumonia--comparison to chlamydial lung infection. Hocke AC, etal., Cytokine. 2007 May;38(2):61-73. Epub 2007 Jul 3.
4. Effects of interleukin-15 on neuronal differentiation of neural stem cells. Huang YS, etal., Brain Res. 2009 Dec 22;1304:38-48. Epub 2009 Sep 10.
5. Changes in IL-15 expression and death-receptor apoptotic signaling in rat gastrocnemius muscle with aging and life-long calorie restriction. Marzetti E, etal., Mech Ageing Dev. 2009 Apr;130(4):272-80.
6. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
9. A role for IL-15 in the migration of effector CD8 T cells to the lung airways following influenza infection. Verbist KC, etal., J Immunol. 2011 Jan 1;186(1):174-82. Epub 2010 Nov 22.
10. Comprehensive Molecular Analyses of a Macrophage-Related Gene Signature With Regard to Prognosis, Immune Features, and Biomarkers for Immunotherapy in Hepatocellular Carcinoma Based on WGCNA and the LASSO Algorithm. Wang T, etal., Front Immunol. 2022 May 27;13:843408. doi: 10.3389/fimmu.2022.843408. eCollection 2022.
Additional References at PubMed
PMID:14607906   PMID:15123770   PMID:15632090   PMID:17135303   PMID:20374432  


Genomics

Comparative Map Data
Il15ra
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81771,712,141 - 71,742,072 (-)NCBIGRCr8
mRatBN7.21766,802,300 - 66,831,973 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1766,802,334 - 66,832,278 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01770,451,861 - 70,481,838 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1770,451,411 - 70,481,750 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01772,155,863 - 72,185,368 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41777,998,621 - 78,029,657 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11778,009,453 - 78,026,168 (-)NCBI
Celera1766,307,417 - 66,337,085 (-)NCBICelera
Cytogenetic Map17q12.2NCBI
IL15RA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38105,948,900 - 5,978,741 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl105,943,639 - 5,978,187 (-)EnsemblGRCh38hg38GRCh38
GRCh37105,994,334 - 6,020,704 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36106,034,340 - 6,060,148 (-)NCBINCBI36Build 36hg18NCBI36
Build 34106,034,339 - 6,060,148NCBI
Celera105,924,720 - 5,950,524 (-)NCBICelera
Cytogenetic Map10p15.1NCBI
HuRef105,921,146 - 5,946,954 (-)NCBIHuRef
CHM1_1105,994,318 - 6,020,126 (-)NCBICHM1_1
T2T-CHM13v2.0105,949,580 - 5,979,435 (-)NCBIT2T-CHM13v2.0
Il15ra
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39211,709,992 - 11,739,129 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl211,710,101 - 11,739,128 (+)EnsemblGRCm39 Ensembl
GRCm38211,705,172 - 11,733,985 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl211,705,290 - 11,734,317 (+)EnsemblGRCm38mm10GRCm38
MGSCv37211,627,163 - 11,655,589 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36211,623,389 - 11,651,815 (+)NCBIMGSCv36mm8
Celera211,623,120 - 11,651,603 (+)NCBICelera
Cytogenetic Map2A1NCBI
cM Map28.97NCBI
Il15ra
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542122,586,012 - 22,620,788 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542122,590,168 - 22,612,835 (-)NCBIChiLan1.0ChiLan1.0
IL15RA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2818,505,994 - 18,533,693 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11018,511,317 - 18,537,670 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0105,993,583 - 6,019,967 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1105,977,496 - 6,003,530 (-)NCBIpanpan1.1PanPan1.1panPan2
IL15RA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1229,981,385 - 30,034,364 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl229,981,234 - 30,038,945 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha227,011,951 - 27,063,544 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0230,362,521 - 30,414,141 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1227,453,074 - 27,510,965 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0228,295,696 - 28,347,242 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0229,013,739 - 29,065,573 (+)NCBIUU_Cfam_GSD_1.0
Il15ra
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934432,424,567 - 32,458,379 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364848,590,482 - 8,623,469 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364848,590,945 - 8,623,478 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL15RA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11065,022,227 - 65,054,385 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21071,094,399 - 71,125,894 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IL15RA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.196,061,475 - 6,096,370 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl96,061,197 - 6,096,250 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605111,364,722 - 11,399,250 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il15ra
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624775847,677 - 877,604 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624775846,063 - 877,894 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Il15ra
184 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:203
Count of miRNA genes:75
Interacting mature miRNAs:76
Transcripts:ENSRNOT00000025252, ENSRNOT00000050998, ENSRNOT00000058221, ENSRNOT00000073691
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
12903978Cm118Cardiac mass QTL 1180.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)172365318468653184Rat
12903979Cm119Cardiac mass QTL 1190.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172365318468653184Rat
12903980Cm120Cardiac mass QTL 1200.002heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)172365318468653184Rat
12903981Am17Aortic mass QTL 170.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)172365318468653184Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318468653184Rat
12903982Kidm70Kidney mass QTL 700.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)172365318470974005Rat
1354619Bp242Blood pressure QTL 2426.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172459934069599340Rat
8552928Pigfal9Plasma insulin-like growth factor 1 level QTL 99blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)172840914773409147Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)172840914773409147Rat
2324621Coatc5Coat color QTL 5coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)173136839173951021Rat
724549Niddm56Non-insulin dependent diabetes mellitus QTL 560.03blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)173199078476990784Rat
1354663Bvd5Brain ventricular dilatation QTL 53.510.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)173199078481292925Rat
1300148Bp192Blood pressure QTL 1923.47arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)173455084373951021Rat
724528Uae4Urinary albumin excretion QTL 44.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)173583708569599340Rat
2301412Kidm40Kidney mass QTL 400.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)173747984782479847Rat
2317054Aia12Adjuvant induced arthritis QTL 124.24joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)173828150983281509Rat
2317060Aia26Adjuvant induced arthritis QTL 263.22joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)173828150983281509Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174054004180387013Rat
1358295Aocep1Aortic cell protein QTL 16.10.00000071thoracic aorta cellular protein amount (VT:0010598)aortic cell percentage174099000585990005Rat
1354635Bp245Blood pressure QTL 2456arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)174207316069599340Rat
1354635Bp245Blood pressure QTL 2456arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)174207316069599340Rat
7411575Bw140Body weight QTL 14030.20.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
8694181Bw151Body weight QTL 1514.360.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
2317038Ginf3Gastrointestinal inflammation QTL 32.890.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)174992015486533673Rat
2303580Gluco49Glucose level QTL 492blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)175004027186533673Rat
4889894Eae33Experimental allergic encephalomyelitis QTL 335.20.0001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)175090909986022412Rat
1354588Bvd4Brain ventricular dilatation QTL 45.310.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)175349882882479847Rat
70210Cm15Cardiac mass QTL 156.5heart right ventricle mass (VT:0007033)heart right ventricle wet weight (CMO:0000072)175724672370156904Rat
1600398Edcs5Endometrial carcinoma susceptibility QTL 52.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)175724672370852846Rat
2302365Gluco40Glucose level QTL 404.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)175724684382046127Rat
7488963Bp369Blood pressure QTL 3690.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)175900564977910000Rat
2317045Aia11Adjuvant induced arthritis QTL 114.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)176078142686533673Rat
7411577Bw141Body weight QTL 1410.001body mass (VT:0001259)body weight gain (CMO:0000420)176261951686533673Rat
1300131Bp193Blood pressure QTL 1933.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)176364000973951021Rat
631502Cm26Cardiac mass QTL 263.71heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)176570358081153923Rat

Markers in Region
BE102654  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21766,808,612 - 66,808,788 (+)MAPPERmRatBN7.2
Rnor_6.01770,458,171 - 70,458,346NCBIRnor6.0
Rnor_5.01772,162,173 - 72,162,348UniSTSRnor5.0
RGSC_v3.41778,004,649 - 78,004,824UniSTSRGSC3.4
Celera1766,313,721 - 66,313,896UniSTS
RH 3.4 Map17637.4UniSTS
Cytogenetic Map17q12.3UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium
Low 3 41 57 41 19 41 8 11 12 35 32 11 8
Below cutoff 2 54 9

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000025252   ⟹   ENSRNOP00000025252
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1766,802,334 - 66,832,278 (-)Ensembl
Rnor_6.0 Ensembl1770,451,411 - 70,481,750 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000102319   ⟹   ENSRNOP00000079978
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1766,802,334 - 66,831,717 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000113114   ⟹   ENSRNOP00000081543
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1766,802,334 - 66,831,717 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000114539   ⟹   ENSRNOP00000094566
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1766,802,334 - 66,831,717 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115316   ⟹   ENSRNOP00000091230
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1766,802,334 - 66,831,717 (-)Ensembl
RefSeq Acc Id: NM_001100801   ⟹   NP_001094271
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81771,712,141 - 71,741,653 (-)NCBI
RefSeq Acc Id: XM_006254225   ⟹   XP_006254287
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81771,712,141 - 71,741,808 (-)NCBI
mRatBN7.21766,802,300 - 66,831,971 (-)NCBI
Rnor_6.01770,451,861 - 70,481,835 (-)NCBI
Rnor_5.01772,155,863 - 72,185,368 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063276765   ⟹   XP_063132835
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81771,712,141 - 71,741,811 (-)NCBI
RefSeq Acc Id: XM_063276766   ⟹   XP_063132836
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81771,712,141 - 71,741,811 (-)NCBI
RefSeq Acc Id: XM_063276767   ⟹   XP_063132837
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81771,712,141 - 71,742,072 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_006254287   ⟸   XM_006254225
- Peptide Label: isoform X2
- UniProtKB: A0A8I6ADB7 (UniProtKB/TrEMBL),   A0A8I6G839 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000025252   ⟸   ENSRNOT00000025252
RefSeq Acc Id: ENSRNOP00000079978   ⟸   ENSRNOT00000102319
RefSeq Acc Id: ENSRNOP00000091230   ⟸   ENSRNOT00000115316
RefSeq Acc Id: ENSRNOP00000094566   ⟸   ENSRNOT00000114539
RefSeq Acc Id: ENSRNOP00000081543   ⟸   ENSRNOT00000113114
RefSeq Acc Id: XP_063132837   ⟸   XM_063276767
- Peptide Label: isoform X4
- UniProtKB: A6JLR8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132836   ⟸   XM_063276766
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063132835   ⟸   XM_063276765
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001094271   ⟸   NM_001100801
- Peptide Label: precursor
- UniProtKB: A0A8I6AI14 (UniProtKB/TrEMBL),   A6JLR7 (UniProtKB/TrEMBL)
Protein Domains
Sushi

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1M293-F1-model_v2 AlphaFold F1M293 1-251 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700559
Promoter ID:EPDNEW_R11079
Type:initiation region
Name:Il15ra_1
Description:interleukin 15 receptor subunit alpha
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01770,481,745 - 70,481,805EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305149 AgrOrtholog
BioCyc Gene G2FUF-8801 BioCyc
Ensembl Genes ENSRNOG00000018706 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000025252.9 UniProtKB/TrEMBL
  ENSRNOT00000102319.1 UniProtKB/TrEMBL
  ENSRNOT00000113114.1 UniProtKB/TrEMBL
  ENSRNOT00000114539.1 UniProtKB/TrEMBL
  ENSRNOT00000115316.1 UniProtKB/TrEMBL
Gene3D-CATH 2.20.28.230 UniProtKB/TrEMBL
InterPro IL15RA UniProtKB/TrEMBL
  Sushi/SCR/CCP_sf UniProtKB/TrEMBL
  Sushi_SCR_CCP UniProtKB/TrEMBL
KEGG Report rno:690369 UniProtKB/TrEMBL
NCBI Gene Il15ra ENTREZGENE
PANTHER INTERLEUKIN-15 RECEPTOR SUBUNIT ALPHA UniProtKB/TrEMBL
  PTHR15060 UniProtKB/TrEMBL
Pfam Sushi UniProtKB/TrEMBL
PhenoGen Il15ra PhenoGen
PROSITE SUSHI UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018706 RatGTEx
SMART CCP UniProtKB/TrEMBL
Superfamily-SCOP Complement_control_module UniProtKB/TrEMBL
UniProt A0A8I5ZP92_RAT UniProtKB/TrEMBL
  A0A8I6ADB7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AI14 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G839 ENTREZGENE, UniProtKB/TrEMBL
  A6JLR7 ENTREZGENE, UniProtKB/TrEMBL
  A6JLR8 ENTREZGENE, UniProtKB/TrEMBL
  F1M293_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-16 Il15ra  interleukin 15 receptor subunit alpha  Il15ra  interleukin 15 receptor, alpha  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-07-28 Il15ra  interleukin 15 receptor, alpha chain  LOC690369  similar to Interleukin-15 receptor alpha chain precursor (IL-15R-alpha) (IL-15RA)  Data merged from RGD:1597321 737654 APPROVED
2011-07-28 Il15ra  interleukin 15 receptor, alpha  Il15ra  interleukin 15 receptor, alpha chain  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-07-27 Il15ra  interleukin 15 receptor, alpha chain  LOC502145  interleukin-15 receptor alpha chain  Data merged from RGD:1594361 737654 APPROVED
2008-04-30 Il15ra  interleukin 15 receptor, alpha chain   Il15ra_predicted  interleukin 15 receptor, alpha chain (predicted)  'predicted' is removed 2292626 APPROVED
2006-11-20 LOC690369  similar to Interleukin-15 receptor alpha chain precursor (IL-15R-alpha) (IL-15RA)      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC502145  interleukin-15 receptor alpha chain      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-01-12 Il15ra_predicted  interleukin 15 receptor, alpha chain (predicted)      Symbol and Name status set to approved 70820 APPROVED