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Gene: Tmem268 (transmembrane protein 268) Rattus norvegicus

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Symbol:

Tmem268

Name:

transmembrane protein 268

RGD ID:

1304595

Description:

Predicted to be located in membrane. Orthologous to human TMEM268 (transmembrane protein 268); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC298104; LOC298104; RGD1304595; similar to RIKEN cDNA 6330416G13 gene; transmembrane protein C9orf91 homolog; uncharacterized protein LOC298104

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TMEM268 (transmembrane protein 268)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Tmem268 (transmembrane protein 268)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tmem268 (transmembrane protein 268)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TMEM268 (transmembrane protein 268)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TMEM268 (transmembrane protein 268)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tmem268 (transmembrane protein 268)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TMEM268 (transmembrane protein 268)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TMEM268 (transmembrane protein 268)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tmem268 (transmembrane protein 268)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Tmem268 (transmembrane protein 268)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TMEM268 (transmembrane protein 268)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tmem268 (transmembrane protein 268)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG18507	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG18507	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	C26B9.1	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	tmem268	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:ch211-222e23.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	81,990,314 - 82,016,970 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	81,991,367 - 82,016,968 (+)	Ensembl				GRCr8
mRatBN7.2	5	76,974,827 - 77,001,457 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	76,977,310 - 77,001,452 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	79,376,857 - 79,399,405 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	81,194,015 - 81,216,596 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	81,169,513 - 81,192,092 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	79,380,987 - 79,407,435 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	79,382,096 - 79,407,433 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	83,496,166 - 83,521,434 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	80,531,483 - 80,555,551 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	75,911,346 - 75,935,194 (+)	NCBI		Celera
RGSC_v3.1	5	80,537,321 - 80,558,939 (+)	NCBI
Cytogenetic Map	5	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

17beta-estradiol (ISO)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4-hydroxyphenyl retinamide (ISO)

acrylamide (EXP)

amitrole (EXP)

atrazine (ISO)

azoxystrobin (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

cadmium dichloride (ISO)

carbamazepine (ISO)

chlorpyrifos (EXP)

cisplatin (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

diazinon (ISO)

dibutyl phthalate (EXP)

dicrotophos (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

fenthion (ISO)

glyphosate (EXP)

imidacloprid (EXP)

methimazole (EXP)

methylmercury chloride (ISO)

methylparaben (ISO)

ozone (ISO)

p-chloromercuribenzoic acid (ISO)

paracetamol (EXP,ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

poly(I:C) (ISO)

quercetin (ISO)

SB 431542 (ISO)

sunitinib (ISO)

tetrachloromethane (EXP)

thiabendazole (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (EXP)

tris(2-butoxyethyl) phosphate (ISO)

tunicamycin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Tmem268
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	81,990,314 - 82,016,970 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	81,991,367 - 82,016,968 (+)	Ensembl				GRCr8
mRatBN7.2	5	76,974,827 - 77,001,457 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	76,977,310 - 77,001,452 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	79,376,857 - 79,399,405 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	81,194,015 - 81,216,596 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	81,169,513 - 81,192,092 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	79,380,987 - 79,407,435 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	79,382,096 - 79,407,433 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	83,496,166 - 83,521,434 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	80,531,483 - 80,555,551 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	75,911,346 - 75,935,194 (+)	NCBI		Celera
RGSC_v3.1	5	80,537,321 - 80,558,939 (+)	NCBI
Cytogenetic Map	5	q24	NCBI

TMEM268
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	114,603,904 - 114,646,422 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	114,611,206 - 114,646,422 (+)	Ensembl			hg38	GRCh38
GRCh37	9	117,373,571 - 117,408,702 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	116,413,527 - 116,448,524 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	9	114,453,193 - 114,487,518	NCBI
Celera	9	88,021,359 - 88,056,348 (+)	NCBI		Celera
Cytogenetic Map	9	q32	NCBI
HuRef	9	86,978,868 - 87,013,612 (+)	NCBI		HuRef
CHM1_1	9	117,520,317 - 117,555,292 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	126,796,322 - 126,838,835 (+)	NCBI		T2T-CHM13v2.0

Tmem268
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	63,472,410 - 63,504,594 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	63,477,018 - 63,504,594 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	63,554,595 - 63,586,357 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	63,558,781 - 63,586,357 (+)	Ensembl			mm10	GRCm38
MGSCv37	4	63,221,394 - 63,247,387 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	63,046,717 - 63,072,716 (+)	NCBI		MGSCv36	mm8
Celera	4	62,220,497 - 62,246,496 (+)	NCBI		Celera
Cytogenetic Map	4	B3	NCBI
cM Map	4	34.02	NCBI

Tmem268
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	13,003,302 - 13,033,242 (-)	Ensembl
ChiLan1.0	NW_004955419	13,003,302 - 13,037,942 (-)	NCBI	ChiLan1.0	ChiLan1.0

TMEM268
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	24,732,298 - 24,766,814 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	24,724,949 - 24,768,522 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	85,709,124 - 85,743,723 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	114,071,930 - 114,106,330 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	114,076,644 - 114,108,086 (+)	Ensembl			panPan2	panpan1.1

TMEM268
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	68,767,517 - 68,793,164 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	68,767,504 - 68,791,368 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	67,168,639 - 67,194,756 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	69,890,513 - 69,916,650 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	69,890,513 - 69,916,641 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	68,405,545 - 68,431,684 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	68,445,815 - 68,471,917 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	69,176,702 - 69,203,116 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tmem268
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	184,050,317 - 184,073,599 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	3,805,423 - 3,841,304 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	3,818,853 - 3,844,043 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM268
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	255,171,244 - 255,193,638 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	255,168,666 - 255,195,980 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	286,221,263 - 286,241,272 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM268
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	24,945,496 - 24,981,045 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	24,947,908 - 24,976,239 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666035	17,850,114 - 17,887,791 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem268
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	20,589,648 - 20,617,455 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624760	20,588,944 - 20,617,070 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Tmem268
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	90,000,458 - 90,024,310 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Tmem268
123 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	307
Count of miRNA genes:	202
Interacting mature miRNAs:	247
Transcripts:	ENSRNOT00000011799
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	38011670	83011670	Rat
1300115	Hrtrt7	Heart rate QTL 7	2.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	52665372	94894052	Rat
1357396	Bw44	Body weight QTL 44	4.19		body mass (VT:0001259)	body weight (CMO:0000012)	5	73779642	118779642	Rat
6907115	Mcs29	Mammary carcinoma susceptibility QTL 29			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	38004331	83004331	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
61380	Edpm5	Estrogen-dependent pituitary mass QTL 5	4.5	0.92	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	5	73779642	103472210	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
61386	Bp49	Blood pressure QTL 49	16.6		cerebrum integrity trait (VT:0010549)	brain infarction volume (CMO:0001013)	5	65089051	103648916	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
2302381	Bw84	Body weight QTL 84	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	73779642	118779642	Rat
1357402	Bw46	Body weight QTL 46	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	73779642	118779642	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	38011670	83011670	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	38011670	83011670	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
1331782	Rf36	Renal function QTL 36	3.296		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	39019942	102105896	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	39985948	84985948	Rat
7394708	Emca11	Estrogen-induced mammary cancer QTL 11			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	73176602	118176602	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	39526924	84526924	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	48523123	91770353	Rat
1578673	Bmd13	Bone mineral density QTL 13	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	5	69474415	114474415	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	91770353	Rat
61359	Eaex	Experimental allergic encephalomyelitis QTL x	3		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	5	60511627	105511627	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	64589016	109589016	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	74335621	156302135	Rat
2290005	Mcs24	Mammary carcinoma susceptibility QTL 24			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	69835120	114835120	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	87027358	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	70969494	136328156	Rat
2316954	Rf57	Renal function QTL 57	0		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	64589016	93503770	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	56546393	101546393	Rat
2312671	Scl64	Serum cholesterol level QTL 64		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	73779642	118779642	Rat
2316957	Pur21	Proteinuria QTL 21	6.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	5	64589016	91762830	Rat

Markers in Region

RH128607

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	77,001,057 - 77,001,249 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	79,407,039 - 79,407,230	NCBI	Rnor6.0
Rnor_5.0	5	83,521,038 - 83,521,229	UniSTS	Rnor5.0
RGSC_v3.4	5	80,555,157 - 80,555,348	UniSTS	RGSC3.4
Celera	5	75,934,800 - 75,934,991	UniSTS
Cytogenetic Map	5	q24	UniSTS

RH138348

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	76,999,974 - 77,000,108 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	79,405,956 - 79,406,089	NCBI	Rnor6.0
Rnor_5.0	5	83,519,955 - 83,520,088	UniSTS	Rnor5.0
RGSC_v3.4	5	80,554,074 - 80,554,207	UniSTS	RGSC3.4
Celera	5	75,933,717 - 75,933,850	UniSTS
RH 3.4 Map	5	577.5	UniSTS
Cytogenetic Map	5	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593252	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000011799 ⟹ ENSRNOP00000011799

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	81,991,367 - 82,016,968 (+)	Ensembl
mRatBN7.2 Ensembl	5	76,977,310 - 77,001,452 (+)	Ensembl
Rnor_6.0 Ensembl	5	79,383,511 - 79,407,433 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085461 ⟹ ENSRNOP00000072407

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	5	79,382,096 - 79,405,240 (+)	Ensembl

RefSeq Acc Id:

NM_001106661 ⟹ NP_001100131

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,992,807 - 82,016,968 (+)	NCBI
mRatBN7.2	5	76,977,310 - 77,001,452 (+)	NCBI
Rnor_6.0	5	79,383,511 - 79,407,433 (+)	NCBI
Rnor_5.0	5	83,496,166 - 83,521,434 (+)	NCBI
RGSC_v3.4	5	80,531,483 - 80,555,551 (+)	RGD
Celera	5	75,911,346 - 75,935,194 (+)	RGD

Sequence:

show sequence

CTCCAGTACTGTGAGGCTTCACTGAGAGGGCCTGAGTCCTCCGCCAGGAGTACAGATGTCAAGG
TTGTATCTGCCTGGTGGCCTAGAAGTTGATCAGAGGCAGCAGGGGAGCACAACCTTGCATCTGT
TTCACGGTTTTTGTGCCTGTTGGGTGTATAGAAGGAGGAGGTACGATAAAGTAGGCTGGAATCC
CCACACTCCCACTTTGCAGGTCATCCCAGCCTCGTGTAACTGCTCCTGTTGAAGCCTTGAGCTA
CACAGCGAAGAGGCCAGAAGGCTCAGTGCCTCCCTGAAGGCAAGTGGAGGTGAGACGCTGCCCG
GTGTGAACTGCACCCCTAGAAACAGGAAGTAGAAGCTAGACCGCTGTCTGTCTGCCATGGCTTG
TGAACCTCCCTCAGATCCTGGTGGGGCAGCTGGTCCTCTGCCCACCTCCACCCTGGGCTGCAGC
ACCCTGCCTCAGGGGAACCCTCCTGGCTGGGGGGAAGAGCTACACAATGGCCAGGTCCTCTCAG
TCCTCCGGATCGACAACACCTGTGCACCCATCTCCTTTGACCTGAGAGTTGCAGAAGAACAGCT
GCAGGCCTGGGGCATTCAGGTCCCTGCTGAGCAGTATAGGAGCTTGGCTGAGAGTGCGCTTTTG
GAGCCTCAAGTGAGGAGGTACATCATCTACAACTCCAGGCCCATGAGGCTGGCCTTTGCTGTGG
TGTTCTATGTGTTGGTGTGGGCCAACATCTACTCCACCAGCCAAATGTTTGCCCTAGGCAACCA
GTGGGCAGGTGTGCTGCTTGCGACCCTGGCCGCTGTCAGCCTGACCCTGACTCTTGTGCTGGTC
TTTGAGAGGCAGCAGAGGAAGGCTAACACTAACACAGACCTGAGGCTGGTGGCTGCCAATGGAG
CCCTTCTGAGACACCGAGTGCTGCTGGGGGTGACAGATACCGTGGAGGGATGCCAGAGTGTGAT
ACAGCTCTGGTTTGTCTACTTTGACCTGGAGAACTGTGTGCAGTTCTTGTCCGATCATGTCCAA
GAAATGAAGAGGAGTCAGGAGTCCTTGCTGAGAAGCAGATTAAGCCAGCTATGTGTTGTCATGG
AGACTGGAGTGAGCCCCGTGGTGGAAAGGCCTGAGGACTTGGAAGATTCTCCCCTCCTGCCCAG
AACTCCTGGTCCTCAGGAGAGACCACTCACACAGACTGAACTCTATCAGCTTGTTCCAGAGGCT
GAGCCAGAGGAGATGGCCCGGCAACTGCTGGCAGTGTTTGGTGGCTACTACACCCGGCTCCTGG
TGACCTCTCAGCTCCCTCAGCCAATGGGAACACGACACATGGACTCTGCAAGGATCCCATGCCC
CTGCCAGCTCATAGAAGTACACATTTTGGGCACAGGATGTTGCCCATTCCTGGCCAGGTGACCT
AGGGATGAAGGTGTTCATCTTCCTCCAAGACTAAGAAGTAGGGGAGGAGTCAGGAGCCCAGCAT
GGCCACCAGTGAGCTCAGATGAGGTCAGCGTTTGGAGACACTTTCTCAAGTGTCAGTCATGTAG
GCCTTTGGGTCATCAAGTGCACACCAGATGTCTTCTTGGCATCATACTCTGTCCTGGCCTTGCT
GAATCTGGTGGCTGAGCTGGTGGCTGGCCTTGCAGCCTGGATGGAGGATACTGTCTGTTGCCTG
TCAAGGCCTAGGGACCTGCAGCTGACTCCACAGGGCAAGTGCCTGACCCTGGGGTCAGAAAGTG
AGACCAAGGCTCCAAGGAGACGCCCATCTTTCAGCGGTGCCTCAGTCTGCCGGTCACAACCTAC
CTGCCCTCAATGTGAGGGAAGATTCTTGGAAGGGTGAGCTAGCTTGTGAGTGACAGTACCGTCT
GGGATTGTTGTCTGTTAGCACCAAGGTTAGAGAGGGCTAGGGTTGGAGGATGGGTGAGGAGACA
AAAGCCTGGCAGATGACCATCAACAAGGGGCACTGGAAAAGAAGCTCCTGTTATACTCAGTGAC
TTTGCACTGGCTTGCTGCTTGTGAATGTGTTTCTCTTCTGCCAAGCAGCAGTGGTGTTTTCTGA
CACTAACATTGTTCTGGAATGAGGTATGATTAGACACTCTGGGTTTATGTGAAGAACTCAGCGA
CTTTCCCAAAGTTGGAAGACTGTCTACAGCCCTATGCCCAGAGCCCTGGACTCGTGTAAAGGTC
CTGCTCCATGAACCAGCCTTTGTGGTTTTTGTCCTCCACAAATCATCATTATAAGTTGGAACTC
TTCCTGGAACTGGCTGGCATATGCATTCATTCCTGTTGGACTCTTATTCATCCTTCAAAACCCT
ACTTTTCATATCCTTCCTGCTGCTTTCTGTCTCACTGAAATTCTGATGGAACTGCCCCCCTTAT
GGATGTTTTATGTTATTCAGTGTTTCTCCTGTACATACCTCTTTTTCTATCAAGACTGTAAACT
CCTCAAGGTCCAACACTGCACCCACCTTCCTTTTGGGAATGACTTGGACTTGTTTAGAAAAAAA
AAACAATTTTGAAAAGTCCCATGGATTGGTCGCCTTGCCCTCTCCACCCATTGTGGCAAATGCT
TCTGGAAGACATGGTTGAATGGTAAGGCCCAGGTCGTGATGGACCAGAGGTCTGGTCTGCAGCT
GTGTCACTCTATTTGTGCACCCTCTGTTTGCCCATCTCTACAGCTGGATGATTTTGGTGATTTC
CAGCTTGTGCTGTTTGTTATTCTTACCTCCGTGCACAAAGTGCTCTCCTGCCCCCAAACTGAGG
GGTCCTTGGTGGGGACTGACCTAAAATAGTAACCTGGATTCTTGTTGCACACCTGCCACATCCA
GGGCTGCGTGACCATGGCTGAGTGCACTGCTTCTCTGTGTGTCCAATGATTCCTTTATAGATTG
ATGCAGTGAACCACAGTGGCACAGCTCAGGAGATTTTCTGGGTGAGACATGCCCTACTTCCTTG
CATTCTTTGTGTCCAAGATGGAGGAGTCCCCCAGCCATGTGTCATGGCAGCTTTGCTCAGTGCA
GTTATTCACTGTCTTTTGAGCCACAGAAAATGTCACTGTGAAGTTGATCAAGGGAAGCCTGTGC
TTGTCCTCTGTTCACAGACTCTTGAGCATGATGGTGGAAACTAAAACTGTTTGGTGAGTGAGAG
AGTTGCTCATGGAGGCTTGGTATGGTCCTTCCACAGTTTTCCTGCCTGCCGGATGGGACTTATG
GGGTGAGCCCACAGTAGACCTTCTTTGTGTGTGCCTCGGTTTCCTCATTTGTAAAATCCACGTG
TCTCACCTGCTTCACAAAGTCGTCATGAGGATGAGCCATCCAGCCTTTTTTTTTTTTTTTTTTT
TGAAAAAATATCTTTAATCCTATCCCTGTGCAGGTGAGGTCTGGGAGTTAAACTGAGGTCCTCA
GTAAGAGTGGTTTATGCCCTTACTTCAGCACCATCTCTACAGCCGAGTGCTCCTAAGTCTTAAG
GCTCAATACCCATAAGAGGCAGGAACCATGGACAAACCGCCATGCAGGTAGGAACAGTCAAAGC
CAAGTCCTGCCTGCCATCTTGTCTCTGTCCCTTCAGACACCGGGGAGGAAAGCACATCCTCCAG
ATGTTTCAACCTGAATAGCAACAACCTTCAGTGCTTGCAACACCAAAGCTGTCACAAAGCCGGA
GCAGGAACTCCATAACCTGTCGCCATTTCTCATTTATTCTTGTTGTCTGGTATACAGTAGGTGC
TCATATGTGTTTGACTCTTGCCTCATGCTCAATTATTCCAGTACCTCAGGGTTATGTATGCAAA
TAAAGATTTATCAAATCTC

hide sequence

RefSeq Acc Id:

XM_017593252 ⟹ XP_017448741

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,991,328 - 82,016,970 (+)	NCBI
mRatBN7.2	5	76,975,854 - 77,001,457 (+)	NCBI
Rnor_6.0	5	79,382,055 - 79,407,435 (+)	NCBI

Sequence:

show sequence

CGTGCGCGTACTCGCGTGCCCGCGCGCCCGCGCTCGGGGGTTGGGGCCGCGGGGCCTGCGTGCG
CGTCCCTCCGCTAAGGCTCGGGTGATCTTTTCCCGCCCCACGCGTCAGGCGTGGGATCTGCAGG
GCAGGGCGGGTGATTTCTGGGGTGAAGGAACCCTAAGGCCAGAGGGCAGAGACCCGGGAGCCAG
CTGCCTAAGGCCGAGGCCAGGAATCCCCACACTCCCACTTTGCAGGTCATCCCAGCCTCGTGTA
ACTGCTCCTGTTGAAGCCTTGAGCTACACAGCGAAGAGGCCAGAAGGCTCAGTGCCTCCCTGAA
GGCAAGTGGAGGTGAGACGCTGCCCGGTGTGAACTGCACCCCTAGAAACAGGAAGTAGAAGCTA
GACCGCTGTCTGTCTGCCATGGCTTGTGAACCTCCCTCAGATCCTGGTGGGGCAGCTGGTCCTC
TGCCCACCTCCACCCTGGGCTGCAGCACCCTGCCTCAGGGGAACCCTCCTGGCTGGGGGGAAGA
GCTACACAATGGCCAGGTCCTCTCAGTCCTCCGGATCGACAACACCTGTGCACCCATCTCCTTT
GACCTGAGAGTTGCAGAAGAACAGCTGCAGGCCTGGGGCATTCAGGTCCCTGCTGAGCAGTATA
GGAGCTTGGCTGAGAGTGCGCTTTTGGAGCCTCAAGTGAGGAGGTACATCATCTACAACTCCAG
GCCCATGAGGCTGGCCTTTGCTGTGGTGTTCTATGTGTTGGTGTGGGCCAACATCTACTCCACC
AGCCAAATGTTTGCCCTAGGCAACCAGTGGGCAGGTGTGCTGCTTGCGACCCTGGCCGCTGTCA
GCCTGACCCTGACTCTTGTGCTGGTCTTTGAGAGGCAGCAGAGGAAGGCTAACACTAACACAGA
CCTGAGGCTGGTGGCTGCCAATGGAGCCCTTCTGAGACACCGAGTGCTGCTGGGGGTGACAGAT
ACCGTGGAGGGATGCCAGAGTGTGATACAGCTCTGGTTTGTCTACTTTGACCTGGAGAACTGTG
TGCAGTTCTTGTCCGATCATGTCCAAGAAATGAAGAGGAGTCAGGAGTCCTTGCTGAGAAGCAG
ATTAAGCCAGCTATGTGTTGTCATGGAGACTGGAGTGAGCCCCGTGGTGGAAAGGCCTGAGGAC
TTGGAAGATTCTCCCCTCCTGCCCAGAACTCCTGGTCCTCAGGAGAGACCACTCACACAGACTG
AACTCTATCAGCTTGTTCCAGAGGCTGAGCCAGAGGAGATGGCCCGGCAACTGCTGGCAGTGTT
TGGTGGCTACTACACCCGGCTCCTGGTGACCTCTCAGCTCCCTCAGCCAATGGGAACACGACAC
ATGGACTCTGCAAGGATCCCATGCCCCTGCCAGCTCATAGAAGTACACATTTTGGGCACAGGAT
GTTGCCCATTCCTGGCCAGGTGACCTAGGGATGAAGGTGTTCATCTTCCTCCAAGACTAAGAAG
TAGGGGAGGAGTCAGGAGCCCAGCATGGCCACCAGTGAGCTCAGATGAGGTCAGCGTTTGGAGA
CACTTTCTCAAGTGTCAGTCATGTAGGCCTTTGGGTCATCAAGTGCACACCAGATGTCTTCTTG
GCATCATACTCTGTCCTGGCCTTGCTGAATCTGGTGGCTGAGCTGGTGGCTGGCCTTGCAGCCT
GGATGGAGGATACTGTCTGTTGCCTGTCAAGGCCTAGGGACCTGCAGCTGACTCCACAGGGCAA
GTGCCTGACCCTGGGGTCAGAAAGTGAGACCAAGGCTCCAAGGAGACGCCCATCTTTCAGCGGT
GCCTCAGTCTGCCGGTCACAACCTACCTGCCCTCAATGTGAGGGAAGATTCTTGGAAGGGTGAG
CTAGCTTGTGAGTGACAGTACCGTCTGGGATTGTTGTCTGTTAGCACCAAGGTTAGAGAGGGCT
AGGGTTGGAGGATGGGTGAGGAGACAAAAGCCTGGCAGATGACCATCAACAAGGGGCACTGGAA
AAGAAGCTCCTGTTATACTCAGTGACTTTGCACTGGCTTGCTGCTTGTGAATGTGTTTCTCTTC
TGCCAAGCAGCAGTGGTGTTTTCTGACACTAACATTGTTCTGGAATGAGGTATGATTAGACACT
CTGGGTTTATGTGAAGAACTCAGCGACTTTCCCAAAGTTGGAAGACTGTCTACAGCCCTATGCC
CAGAGCCCTGGACTCGTGTAAAGGTCCTGCTCCATGAACCAGCCTTTGTGGTTTTTGTCCTCCA
CAAATCATCATTATAAGTTGGAACTCTTCCTGGAACTGGCTGGCATATGCATTCATTCCTGTTG
GACTCTTATTCATCCTTCAAAACCCTACTTTTCATATCCTTCCTGCTGCTTTCTGTCTCACTGA
AATTCTGATGGAACTGCCCCCCTTATGGATGTTTTATGTTATTCAGTGTTTCTCCTGTACATAC
CTCTTTTTCTATCAAGACTGTAAACTCCTCAAGGTCCAACACTGCACCCACCTTCCTTTTGGGA
ATGACTTGGACTTGTTTAGAAAAAAAAAACAATTTTGAAAAGTCCCATGGATTGGTCGCCTTGC
CCTCTCCACCCATTGTGGCAAATGCTTCTGGAAGACATGGTTGAATGGTAAGGCCCAGGTCGTG
ATGGACCAGAGGTCTGGTCTGCAGCTGTGTCACTCTATTTGTGCACCCTCTGTTTGCCCATCTC
TACAGCTGGATGATTTTGGTGATTTCCAGCTTGTGCTGTTTGTTATTCTTACCTCCGTGCACAA
AGTGCTCTCCTGCCCCCAAACTGAGGGGTCCTTGGTGGGGACTGACCTAAAATAGTAACCTGGA
TTCTTGTTGCACACCTGCCACATCCAGGGCTGCGTGACCATGGCTGAGTGCACTGCTTCTCTGT
GTGTCCAATGATTCCTTTATAGATTGATGCAGTGAACCACAGTGGCACAGCTCAGGAGATTTTC
TGGGTGAGACATGCCCTACTTCCTTGCATTCTTTGTGTCCAAGATGGAGGAGTCCCCCAGCCAT
GTGTCATGGCAGCTTTGCTCAGTGCAGTTATTCACTGTCTTTTGAGCCACAGAAAATGTCACTG
TGAAGTTGATCAAGGGAAGCCTGTGCTTGTCCTCTGTTCACAGACTCTTGAGCATGATGGTGGA
AACTAAAACTGTTTGGTGAGTGAGAGAGTTGCTCATGGAGGCTTGGTATGGTCCTTCCACAGTT
TTCCTGCCTGCCGGATGGGACTTATGGGGTGAGCCCACAGTAGACCTTCTTTGTGTGTGCCTCG
GTTTCCTCATTTGTAAAATCCACGTGTCTCACCTGCTTCACAAAGTCGTCATGAGGATGAGCCA
TCCAGCCTTTTTTTTTTTTTTTTTTTTGAAAAAATATCTTTAATCCTATCCCTGTGCAGGTGAG
GTCTGGGAGTTAAACTGAGGTCCTCAGTAAGAGTGGTTTATGCCCTTACTTCAGCACCATCTCT
ACAGCCGAGTGCTCCTAAGTCTTAAGGCTCAATACCCATAAGAGGCAGGAACCATGGACAAACC
GCCATGCAGGTAGGAACAGTCAAAGCCAAGTCCTGCCTGCCATCTTGTCTCTGTCCCTTCAGAC
ACCGGGGAGGAAAGCACATCCTCCAGATGTTTCAACCTGAATAGCAACAACCTTCAGTGCTTGC
AACACCAAAGCTGTCACAAAGCCGGAGCAGGAACTCCATAACCTGTCGCCATTTCTCATTTATT
CTTGTTGTCTGGTATACAGTAGGTGCTCATATGTGTTTGACTCTTGCCTCATGCTCAATTATTC
CAGTACCTCAGGGTTATGTATGCAAATAAAGATTTATCAAATCTCAA

hide sequence

RefSeq Acc Id:

XM_017593253 ⟹ XP_017448742

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,990,314 - 82,016,970 (+)	NCBI
mRatBN7.2	5	76,974,827 - 77,001,457 (+)	NCBI
Rnor_6.0	5	79,380,987 - 79,407,435 (+)	NCBI

Sequence:

show sequence

GCTAAATCCCCAGCCCCAGCAGCCTGCCTTCTTGATCCTCACTTGTCCCCAGGGGCACCTGCAT
GGGATATGCTAATTTGGCTTTTCAATTCTTTCTTGCTGCTTTGAAACATCCTGCAGGCATATGT
AAGTCCTGTGGTCTGGAAGTCCTCAAGAGTTTCATAGTAACTGTTGAACGAAGAAGTGTGTATG
TGTTTCTCTGTGTGTGGAAGACCACTTGTAGAGAGGCCTGTACTGTCCTAGTCCTTCCTGCAAG
CAAGGGTGAGAACCACATATGCATCCGATCCCCTTAAAAAGAAACAAGGCCATTGGTGCAGCAA
CTAAGTACCCAGGGTCTTTGTTAAAAGACAGTGTTTGGTGGCTAATAGAATCTGCTCCCTTTAT
ATATAAACATGCACTCGCGGTTAGCCACGTCTGTTGGTGTCAGACCAACCAACCAAGGTGAACC
CAAGACTAGTGATTCACTTGGAAAAAGAAGCAGACCATCACAGATCCTCTTAAATCTTAAGGAG
CAGGGTGAACAAATGTGGGTTTTTGAACACCTCATACATTATTTTGTTGAAATTTCACACAATT
TCATGGCACAGTCATAACTAGTTTTAAAGAAAACGCAGACACAAAGTTTAATTTACCAGACAAT
TAAGAAGTGGGGACTACACCGACGCTTTCAATACTGAACATCGTTTTTCATTAAAAACAAGCCT
AGAGAGAAACTTCTGGTCCCGAGTGTGCCTCATGCATCAGATCCCATGACTGTGTCACTCGGGA
CAGGCCCCCCCACCCCGCTCCTTCACGGCAGGGACGAGCCCAGATCTCATGCACGTGGCGGGCA
CAGGGCTCCTACTGGCGCCCTGGGGGAGCGTGGCTGATGAAACGCTCCGGGCTCGGCCTGAGAG
ACGTGCCCCCTACGGGGTAATTCGGCGGAAGAGACCGGCTGGGGTGGCGCGCCCGAAGGGCGTG
CGGGGGCGACGGGGGCGGCGGCGCCCGGACGCCGCGGCGCAGAAAGGGCGTGGAACCTTTGACC
CTGCGCGTCCCCGGGCGGCAGCTAGGCGGAATCCCCACACTCCCACTTTGCAGGTCATCCCAGC
CTCGTGTAACTGCTCCTGTTGAAGCCTTGAGCTACACAGCGAAGAGGCCAGAAGGCTCAGTGCC
TCCCTGAAGGCAAGTGGAGGTGAGACGCTGCCCGGTGTGAACTGCACCCCTAGAAACAGGAAGT
AGAAGCTAGACCGCTGTCTGTCTGCCATGGCTTGTGAACCTCCCTCAGATCCTGGTGGGGCAGC
TGGTCCTCTGCCCACCTCCACCCTGGGCTGCAGCACCCTGCCTCAGGGGAACCCTCCTGGCTGG
GGGGAAGAGCTACACAATGGCCAGGTCCTCTCAGTCCTCCGGATCGACAACACCTGTGCACCCA
TCTCCTTTGACCTGAGAGTTGCAGAAGAACAGCTGCAGGCCTGGGGCATTCAGGTCCCTGCTGA
GCAGTATAGGAGCTTGGCTGAGAGTGCGCTTTTGGAGCCTCAAGTGAGGAGGTACATCATCTAC
AACTCCAGGCCCATGAGGCTGGCCTTTGCTGTGGTGTTCTATGTGTTGGTGTGGGCCAACATCT
ACTCCACCAGCCAAATGTTTGCCCTAGGCAACCAGTGGGCAGGTGTGCTGCTTGCGACCCTGGC
CGCTGTCAGCCTGACCCTGACTCTTGTGCTGGTCTTTGAGAGGCAGCAGAGGAAGGCTAACACT
AACACAGACCTGAGGCTGGTGGCTGCCAATGGAGCCCTTCTGAGACACCGAGTGCTGCTGGGGG
TGACAGATACCGTGGAGGGATGCCAGAGTGTGATACAGCTCTGGTTTGTCTACTTTGACCTGGA
GAACTGTGTGCAGTTCTTGTCCGATCATGTCCAAGAAATGAAGAGGAGTCAGGAGTCCTTGCTG
AGAAGCAGATTAAGCCAGCTATGTGTTGTCATGGAGACTGGAGTGAGCCCCGTGGTGGAAAGGC
CTGAGGACTTGGAAGATTCTCCCCTCCTGCCCAGAACTCCTGGTCCTCAGGAGAGACCACTCAC
ACAGACTGAACTCTATCAGCTTGTTCCAGAGGCTGAGCCAGAGGAGATGGCCCGGCAACTGCTG
GCAGTGTTTGGTGGCTACTACACCCGGCTCCTGGTGACCTCTCAGCTCCCTCAGCCAATGGGAA
CACGACACATGGACTCTGCAAGGATCCCATGCCCCTGCCAGCTCATAGAAGTACACATTTTGGG
CACAGGATGTTGCCCATTCCTGGCCAGGTGACCTAGGGATGAAGGTGTTCATCTTCCTCCAAGA
CTAAGAAGTAGGGGAGGAGTCAGGAGCCCAGCATGGCCACCAGTGAGCTCAGATGAGGTCAGCG
TTTGGAGACACTTTCTCAAGTGTCAGTCATGTAGGCCTTTGGGTCATCAAGTGCACACCAGATG
TCTTCTTGGCATCATACTCTGTCCTGGCCTTGCTGAATCTGGTGGCTGAGCTGGTGGCTGGCCT
TGCAGCCTGGATGGAGGATACTGTCTGTTGCCTGTCAAGGCCTAGGGACCTGCAGCTGACTCCA
CAGGGCAAGTGCCTGACCCTGGGGTCAGAAAGTGAGACCAAGGCTCCAAGGAGACGCCCATCTT
TCAGCGGTGCCTCAGTCTGCCGGTCACAACCTACCTGCCCTCAATGTGAGGGAAGATTCTTGGA
AGGGTGAGCTAGCTTGTGAGTGACAGTACCGTCTGGGATTGTTGTCTGTTAGCACCAAGGTTAG
AGAGGGCTAGGGTTGGAGGATGGGTGAGGAGACAAAAGCCTGGCAGATGACCATCAACAAGGGG
CACTGGAAAAGAAGCTCCTGTTATACTCAGTGACTTTGCACTGGCTTGCTGCTTGTGAATGTGT
TTCTCTTCTGCCAAGCAGCAGTGGTGTTTTCTGACACTAACATTGTTCTGGAATGAGGTATGAT
TAGACACTCTGGGTTTATGTGAAGAACTCAGCGACTTTCCCAAAGTTGGAAGACTGTCTACAGC
CCTATGCCCAGAGCCCTGGACTCGTGTAAAGGTCCTGCTCCATGAACCAGCCTTTGTGGTTTTT
GTCCTCCACAAATCATCATTATAAGTTGGAACTCTTCCTGGAACTGGCTGGCATATGCATTCAT
TCCTGTTGGACTCTTATTCATCCTTCAAAACCCTACTTTTCATATCCTTCCTGCTGCTTTCTGT
CTCACTGAAATTCTGATGGAACTGCCCCCCTTATGGATGTTTTATGTTATTCAGTGTTTCTCCT
GTACATACCTCTTTTTCTATCAAGACTGTAAACTCCTCAAGGTCCAACACTGCACCCACCTTCC
TTTTGGGAATGACTTGGACTTGTTTAGAAAAAAAAAACAATTTTGAAAAGTCCCATGGATTGGT
CGCCTTGCCCTCTCCACCCATTGTGGCAAATGCTTCTGGAAGACATGGTTGAATGGTAAGGCCC
AGGTCGTGATGGACCAGAGGTCTGGTCTGCAGCTGTGTCACTCTATTTGTGCACCCTCTGTTTG
CCCATCTCTACAGCTGGATGATTTTGGTGATTTCCAGCTTGTGCTGTTTGTTATTCTTACCTCC
GTGCACAAAGTGCTCTCCTGCCCCCAAACTGAGGGGTCCTTGGTGGGGACTGACCTAAAATAGT
AACCTGGATTCTTGTTGCACACCTGCCACATCCAGGGCTGCGTGACCATGGCTGAGTGCACTGC
TTCTCTGTGTGTCCAATGATTCCTTTATAGATTGATGCAGTGAACCACAGTGGCACAGCTCAGG
AGATTTTCTGGGTGAGACATGCCCTACTTCCTTGCATTCTTTGTGTCCAAGATGGAGGAGTCCC
CCAGCCATGTGTCATGGCAGCTTTGCTCAGTGCAGTTATTCACTGTCTTTTGAGCCACAGAAAA
TGTCACTGTGAAGTTGATCAAGGGAAGCCTGTGCTTGTCCTCTGTTCACAGACTCTTGAGCATG
ATGGTGGAAACTAAAACTGTTTGGTGAGTGAGAGAGTTGCTCATGGAGGCTTGGTATGGTCCTT
CCACAGTTTTCCTGCCTGCCGGATGGGACTTATGGGGTGAGCCCACAGTAGACCTTCTTTGTGT
GTGCCTCGGTTTCCTCATTTGTAAAATCCACGTGTCTCACCTGCTTCACAAAGTCGTCATGAGG
ATGAGCCATCCAGCCTTTTTTTTTTTTTTTTTTTTGAAAAAATATCTTTAATCCTATCCCTGTG
CAGGTGAGGTCTGGGAGTTAAACTGAGGTCCTCAGTAAGAGTGGTTTATGCCCTTACTTCAGCA
CCATCTCTACAGCCGAGTGCTCCTAAGTCTTAAGGCTCAATACCCATAAGAGGCAGGAACCATG
GACAAACCGCCATGCAGGTAGGAACAGTCAAAGCCAAGTCCTGCCTGCCATCTTGTCTCTGTCC
CTTCAGACACCGGGGAGGAAAGCACATCCTCCAGATGTTTCAACCTGAATAGCAACAACCTTCA
GTGCTTGCAACACCAAAGCTGTCACAAAGCCGGAGCAGGAACTCCATAACCTGTCGCCATTTCT
CATTTATTCTTGTTGTCTGGTATACAGTAGGTGCTCATATGTGTTTGACTCTTGCCTCATGCTC
AATTATTCCAGTACCTCAGGGTTATGTATGCAAATAAAGATTTATCAAATCTCAA

hide sequence

RefSeq Acc Id:

XM_017593255 ⟹ XP_017448744

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,991,330 - 82,016,970 (+)	NCBI
mRatBN7.2	5	76,975,854 - 77,001,457 (+)	NCBI
Rnor_6.0	5	79,382,055 - 79,407,435 (+)	NCBI

Sequence:

show sequence

CGTGCGCGTACTCGCGTGCCCGCGCGCCCGCGCTCGGGGGTTGGGGCCGCGGGGCCTGCGTGCG
CGTCCCTCCGCTAAGGCTCGGGTGATCTTTTCCCGCCCCACGCGTCAGGCGTGGGATCTGCAGG
GCAGGGCGGGTGATTTCTGGGGTGAAGGAACCCTAAGGCCAGAGGGCAGAGACCCGGGAGCCAG
CTGCCTAAGGCCGAGGCCAGGTCATCCCAGCCTCGTGTAACTGCTCCTGTTGAAGCCTTGAGCT
ACACAGCGAAGAGGCCAGAAGGCTCAGTGCCTCCCTGAAGGCAAGTGGAGGTGAGACGCTGCCC
GGTGTGAACTGCACCCCTAGAAACAGGAAGTAGAAGCTAGACCGCTGTCTGTCTGCCATGGCTT
GTGAACCTCCCTCAGATCCTGGTGGGGCAGCTGGTCCTCTGCCCACCTCCACCCTGGGCTGCAG
CACCCTGCCTCAGGGGAACCCTCCTGGCTGGGGGGAAGAGCTACACAATGGCCAGGTCCTCTCA
GTCCTCCGGATCGACAACACCTGTGCACCCATCTCCTTTGACCTGAGAGTTGCAGAAGAACAGC
TGCAGGCCTGGGGCATTCAGGTCCCTGCTGAGCAGTATAGGAGCTTGGCTGAGAGTGCGCTTTT
GGAGCCTCAAGTGAGGAGGTACATCATCTACAACTCCAGGCCCATGAGGCTGGCCTTTGCTGTG
GTGTTCTATGTGTTGGTGTGGGCCAACATCTACTCCACCAGCCAAATGTTTGCCCTAGGCAACC
AGTGGGCAGGTGTGCTGCTTGCGACCCTGGCCGCTGTCAGCCTGACCCTGACTCTTGTGCTGGT
CTTTGAGAGGCAGCAGAGGAAGGCTAACACTAACACAGACCTGAGGCTGGTGGCTGCCAATGGA
GCCCTTCTGAGACACCGAGTGCTGCTGGGGGTGACAGATACCGTGGAGGGATGCCAGAGTGTGA
TACAGCTCTGGTTTGTCTACTTTGACCTGGAGAACTGTGTGCAGTTCTTGTCCGATCATGTCCA
AGAAATGAAGAGGAGTCAGGAGTCCTTGCTGAGAAGCAGATTAAGCCAGCTATGTGTTGTCATG
GAGACTGGAGTGAGCCCCGTGGTGGAAAGGCCTGAGGACTTGGAAGATTCTCCCCTCCTGCCCA
GAACTCCTGGTCCTCAGGAGAGACCACTCACACAGACTGAACTCTATCAGCTTGTTCCAGAGGC
TGAGCCAGAGGAGATGGCCCGGCAACTGCTGGCAGTGTTTGGTGGCTACTACACCCGGCTCCTG
GTGACCTCTCAGCTCCCTCAGCCAATGGGAACACGACACATGGACTCTGCAAGGATCCCATGCC
CCTGCCAGCTCATAGAAGTACACATTTTGGGCACAGGATGTTGCCCATTCCTGGCCAGGTGACC
TAGGGATGAAGGTGTTCATCTTCCTCCAAGACTAAGAAGTAGGGGAGGAGTCAGGAGCCCAGCA
TGGCCACCAGTGAGCTCAGATGAGGTCAGCGTTTGGAGACACTTTCTCAAGTGTCAGTCATGTA
GGCCTTTGGGTCATCAAGTGCACACCAGATGTCTTCTTGGCATCATACTCTGTCCTGGCCTTGC
TGAATCTGGTGGCTGAGCTGGTGGCTGGCCTTGCAGCCTGGATGGAGGATACTGTCTGTTGCCT
GTCAAGGCCTAGGGACCTGCAGCTGACTCCACAGGGCAAGTGCCTGACCCTGGGGTCAGAAAGT
GAGACCAAGGCTCCAAGGAGACGCCCATCTTTCAGCGGTGCCTCAGTCTGCCGGTCACAACCTA
CCTGCCCTCAATGTGAGGGAAGATTCTTGGAAGGGTGAGCTAGCTTGTGAGTGACAGTACCGTC
TGGGATTGTTGTCTGTTAGCACCAAGGTTAGAGAGGGCTAGGGTTGGAGGATGGGTGAGGAGAC
AAAAGCCTGGCAGATGACCATCAACAAGGGGCACTGGAAAAGAAGCTCCTGTTATACTCAGTGA
CTTTGCACTGGCTTGCTGCTTGTGAATGTGTTTCTCTTCTGCCAAGCAGCAGTGGTGTTTTCTG
ACACTAACATTGTTCTGGAATGAGGTATGATTAGACACTCTGGGTTTATGTGAAGAACTCAGCG
ACTTTCCCAAAGTTGGAAGACTGTCTACAGCCCTATGCCCAGAGCCCTGGACTCGTGTAAAGGT
CCTGCTCCATGAACCAGCCTTTGTGGTTTTTGTCCTCCACAAATCATCATTATAAGTTGGAACT
CTTCCTGGAACTGGCTGGCATATGCATTCATTCCTGTTGGACTCTTATTCATCCTTCAAAACCC
TACTTTTCATATCCTTCCTGCTGCTTTCTGTCTCACTGAAATTCTGATGGAACTGCCCCCCTTA
TGGATGTTTTATGTTATTCAGTGTTTCTCCTGTACATACCTCTTTTTCTATCAAGACTGTAAAC
TCCTCAAGGTCCAACACTGCACCCACCTTCCTTTTGGGAATGACTTGGACTTGTTTAGAAAAAA
AAAACAATTTTGAAAAGTCCCATGGATTGGTCGCCTTGCCCTCTCCACCCATTGTGGCAAATGC
TTCTGGAAGACATGGTTGAATGGTAAGGCCCAGGTCGTGATGGACCAGAGGTCTGGTCTGCAGC
TGTGTCACTCTATTTGTGCACCCTCTGTTTGCCCATCTCTACAGCTGGATGATTTTGGTGATTT
CCAGCTTGTGCTGTTTGTTATTCTTACCTCCGTGCACAAAGTGCTCTCCTGCCCCCAAACTGAG
GGGTCCTTGGTGGGGACTGACCTAAAATAGTAACCTGGATTCTTGTTGCACACCTGCCACATCC
AGGGCTGCGTGACCATGGCTGAGTGCACTGCTTCTCTGTGTGTCCAATGATTCCTTTATAGATT
GATGCAGTGAACCACAGTGGCACAGCTCAGGAGATTTTCTGGGTGAGACATGCCCTACTTCCTT
GCATTCTTTGTGTCCAAGATGGAGGAGTCCCCCAGCCATGTGTCATGGCAGCTTTGCTCAGTGC
AGTTATTCACTGTCTTTTGAGCCACAGAAAATGTCACTGTGAAGTTGATCAAGGGAAGCCTGTG
CTTGTCCTCTGTTCACAGACTCTTGAGCATGATGGTGGAAACTAAAACTGTTTGGTGAGTGAGA
GAGTTGCTCATGGAGGCTTGGTATGGTCCTTCCACAGTTTTCCTGCCTGCCGGATGGGACTTAT
GGGGTGAGCCCACAGTAGACCTTCTTTGTGTGTGCCTCGGTTTCCTCATTTGTAAAATCCACGT
GTCTCACCTGCTTCACAAAGTCGTCATGAGGATGAGCCATCCAGCCTTTTTTTTTTTTTTTTTT
TTGAAAAAATATCTTTAATCCTATCCCTGTGCAGGTGAGGTCTGGGAGTTAAACTGAGGTCCTC
AGTAAGAGTGGTTTATGCCCTTACTTCAGCACCATCTCTACAGCCGAGTGCTCCTAAGTCTTAA
GGCTCAATACCCATAAGAGGCAGGAACCATGGACAAACCGCCATGCAGGTAGGAACAGTCAAAG
CCAAGTCCTGCCTGCCATCTTGTCTCTGTCCCTTCAGACACCGGGGAGGAAAGCACATCCTCCA
GATGTTTCAACCTGAATAGCAACAACCTTCAGTGCTTGCAACACCAAAGCTGTCACAAAGCCGG
AGCAGGAACTCCATAACCTGTCGCCATTTCTCATTTATTCTTGTTGTCTGGTATACAGTAGGTG
CTCATATGTGTTTGACTCTTGCCTCATGCTCAATTATTCCAGTACCTCAGGGTTATGTATGCAA
ATAAAGATTTATCAAATCTCAA

hide sequence

RefSeq Acc Id:

XM_039109475 ⟹ XP_038965403

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,990,314 - 82,016,970 (+)	NCBI
mRatBN7.2	5	76,974,827 - 77,001,457 (+)	NCBI

RefSeq Acc Id:

XM_039109476 ⟹ XP_038965404

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,991,346 - 82,016,970 (+)	NCBI
mRatBN7.2	5	76,975,853 - 77,001,457 (+)	NCBI

RefSeq Acc Id:

XM_039109477 ⟹ XP_038965405

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	82,002,487 - 82,016,970 (+)	NCBI
mRatBN7.2	5	76,986,976 - 77,001,457 (+)	NCBI

RefSeq Acc Id:

XM_063287353 ⟹ XP_063143423

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,991,348 - 82,016,970 (+)	NCBI

RefSeq Acc Id:

XM_063287354 ⟹ XP_063143424

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,991,348 - 82,016,970 (+)	NCBI

RefSeq Acc Id:

XM_063287355 ⟹ XP_063143425

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,991,344 - 82,010,374 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100131	(Get FASTA)	NCBI Sequence Viewer
	NP_001423606	(Get FASTA)	NCBI Sequence Viewer
	NP_001423607	(Get FASTA)	NCBI Sequence Viewer
	NP_001423608	(Get FASTA)	NCBI Sequence Viewer
	NP_001423609	(Get FASTA)	NCBI Sequence Viewer
	XP_017448741	(Get FASTA)	NCBI Sequence Viewer
	XP_017448742	(Get FASTA)	NCBI Sequence Viewer
	XP_017448744	(Get FASTA)	NCBI Sequence Viewer
	XP_038965403	(Get FASTA)	NCBI Sequence Viewer
	XP_038965404	(Get FASTA)	NCBI Sequence Viewer
	XP_038965405	(Get FASTA)	NCBI Sequence Viewer
	XP_063143423	(Get FASTA)	NCBI Sequence Viewer
	XP_063143424	(Get FASTA)	NCBI Sequence Viewer
	XP_063143425	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM10518	(Get FASTA)	NCBI Sequence Viewer
	EDM10519	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000011799
	ENSRNOP00000011799.4

RefSeq Acc Id:

NP_001100131 ⟸ NM_001106661

- UniProtKB:

D3ZSU8 (UniProtKB/TrEMBL), A6J7Y8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MACEPPSDPGGAAGPLPTSTLGCSTLPQGNPPGWGEELHNGQVLSVLRIDNTCAPISFDLRVAE
EQLQAWGIQVPAEQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVLVWANIYSTSQMFAL
GNQWAGVLLATLAAVSLTLTLVLVFERQQRKANTNTDLRLVAANGALLRHRVLLGVTDTVEGCQ
SVIQLWFVYFDLENCVQFLSDHVQEMKRSQESLLRSRLSQLCVVMETGVSPVVERPEDLEDSPL
LPRTPGPQERPLTQTELYQLVPEAEPEEMARQLLAVFGGYYTRLLVTSQLPQPMGTRHMDSARI
PCPCQLIEVHILGTGCCPFLAR

hide sequence

RefSeq Acc Id:

XP_017448742 ⟸ XM_017593253

- Peptide Label:

isoform X1

- Sequence:

show sequence

MACEPPSDPGGAAGPLPTSTLGCSTLPQGNPPGWGEELHNGQVLSVLRIDNTCAPISFDLRVAE
EQLQAWGIQVPAEQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVLVWANIYSTSQMFAL
GNQWAGVLLATLAAVSLTLTLVLVFERQQRKANTNTDLRLVAANGALLRHRVLLGVTDTVEGCQ
SVIQLWFVYFDLENCVQFLSDHVQEMKRSQESLLRSRLSQLCVVMETGVSPVVERPEDLEDSPL
LPRTPGPQERPLTQTELYQLVPEAEPEEMARQLLAVFGGYYTRLLVTSQLPQPMGTRHMDSARI
PCPCQLIEVHILGTGCCPFLAR

hide sequence

RefSeq Acc Id:

XP_017448741 ⟸ XM_017593252

- Peptide Label:

isoform X1

- Sequence:

show sequence

MACEPPSDPGGAAGPLPTSTLGCSTLPQGNPPGWGEELHNGQVLSVLRIDNTCAPISFDLRVAE
EQLQAWGIQVPAEQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVLVWANIYSTSQMFAL
GNQWAGVLLATLAAVSLTLTLVLVFERQQRKANTNTDLRLVAANGALLRHRVLLGVTDTVEGCQ
SVIQLWFVYFDLENCVQFLSDHVQEMKRSQESLLRSRLSQLCVVMETGVSPVVERPEDLEDSPL
LPRTPGPQERPLTQTELYQLVPEAEPEEMARQLLAVFGGYYTRLLVTSQLPQPMGTRHMDSARI
PCPCQLIEVHILGTGCCPFLAR

hide sequence

RefSeq Acc Id:

XP_017448744 ⟸ XM_017593255

- Peptide Label:

isoform X1

- Sequence:

show sequence

MACEPPSDPGGAAGPLPTSTLGCSTLPQGNPPGWGEELHNGQVLSVLRIDNTCAPISFDLRVAE
EQLQAWGIQVPAEQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVLVWANIYSTSQMFAL
GNQWAGVLLATLAAVSLTLTLVLVFERQQRKANTNTDLRLVAANGALLRHRVLLGVTDTVEGCQ
SVIQLWFVYFDLENCVQFLSDHVQEMKRSQESLLRSRLSQLCVVMETGVSPVVERPEDLEDSPL
LPRTPGPQERPLTQTELYQLVPEAEPEEMARQLLAVFGGYYTRLLVTSQLPQPMGTRHMDSARI
PCPCQLIEVHILGTGCCPFLAR

hide sequence

Ensembl Acc Id:

ENSRNOP00000011799 ⟸ ENSRNOT00000011799

Ensembl Acc Id:

ENSRNOP00000072407 ⟸ ENSRNOT00000085461

RefSeq Acc Id:	XP_038965403 ⟸ XM_039109475
- Peptide Label:	isoform X1
- UniProtKB:	D3ZSU8 (UniProtKB/TrEMBL), A6J7Y8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038965404 ⟸ XM_039109476
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038965405 ⟸ XM_039109477
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063143425 ⟸ XM_063287355
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063143423 ⟸ XM_063287353
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063143424 ⟸ XM_063287354
- Peptide Label:	isoform X1
- UniProtKB:	A6J7Y8 (UniProtKB/TrEMBL), D3ZSU8 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZSU8-F1-model_v2	AlphaFold	D3ZSU8	1-342	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693808

Promoter ID:

EPDNEW_R4327

Type:

single initiation site

Name:

Tmem268_1

Description:

transmembrane protein 268

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	79,382,062 - 79,382,122	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304595	AgrOrtholog
BioCyc Gene	G2FUF-41061	BioCyc
Ensembl Genes	ENSRNOG00000008712	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000011799	ENTREZGENE
	ENSRNOT00000011799.6	UniProtKB/TrEMBL
InterPro	DUF4481	UniProtKB/TrEMBL
KEGG Report	rno:298104	UniProtKB/TrEMBL
NCBI Gene	298104	ENTREZGENE
PANTHER	PTHR31193	UniProtKB/TrEMBL
	TRANSMEMBRANE PROTEIN 268	UniProtKB/TrEMBL
Pfam	DUF4481	UniProtKB/TrEMBL
PhenoGen	Tmem268	PhenoGen
RatGTEx	ENSRNOG00000008712	RatGTEx
UniProt	A6J7Y8	ENTREZGENE, UniProtKB/TrEMBL
	D3ZSU8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-06-29	Tmem268	transmembrane protein 268	RGD1304595	similar to RIKEN cDNA 6330416G13 gene	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1304595	similar to RIKEN cDNA 6330416G13 gene	RGD1304595_predicted	similar to RIKEN cDNA 6330416G13 gene (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1304595_predicted	similar to RIKEN cDNA 6330416G13 gene (predicted)	LOC298104_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC298104_predicted	similar to RIKEN cDNA 6330416G13 gene (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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