TMEM268 (transmembrane protein 268) - Rat Genome Database

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Gene: TMEM268 (transmembrane protein 268) Homo sapiens
Analyze
Symbol: TMEM268
Name: transmembrane protein 268
RGD ID: 1312125
HGNC Page HGNC:24513
Description: Predicted to be located in membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C9orf91; chromosome 9 open reading frame 91; DKFZp547P234; FLJ38045; MGC129868; MGC129869; RP11-402G3.2; transmembrane protein C9orf91
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389114,603,904 - 114,646,422 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9114,611,206 - 114,646,422 (+)EnsemblGRCh38hg38GRCh38
GRCh379117,373,571 - 117,408,702 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369116,413,527 - 116,448,524 (+)NCBINCBI36Build 36hg18NCBI36
Build 349114,453,193 - 114,487,518NCBI
Celera988,021,359 - 88,056,348 (+)NCBICelera
Cytogenetic Map9q32NCBI
HuRef986,978,868 - 87,013,612 (+)NCBIHuRef
CHM1_19117,520,317 - 117,555,292 (+)NCBICHM1_1
T2T-CHM13v2.09126,796,322 - 126,838,835 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:8619474   PMID:9110174   PMID:11076863   PMID:11230166   PMID:14702039   PMID:15489336   PMID:16344560   PMID:16381901   PMID:16712791   PMID:19322201   PMID:21988832   PMID:28514442  
PMID:30361615   PMID:33961781   PMID:35748872  


Genomics

Comparative Map Data
TMEM268
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389114,603,904 - 114,646,422 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9114,611,206 - 114,646,422 (+)EnsemblGRCh38hg38GRCh38
GRCh379117,373,571 - 117,408,702 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369116,413,527 - 116,448,524 (+)NCBINCBI36Build 36hg18NCBI36
Build 349114,453,193 - 114,487,518NCBI
Celera988,021,359 - 88,056,348 (+)NCBICelera
Cytogenetic Map9q32NCBI
HuRef986,978,868 - 87,013,612 (+)NCBIHuRef
CHM1_19117,520,317 - 117,555,292 (+)NCBICHM1_1
T2T-CHM13v2.09126,796,322 - 126,838,835 (+)NCBIT2T-CHM13v2.0
Tmem268
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39463,472,410 - 63,504,594 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl463,477,018 - 63,504,594 (+)EnsemblGRCm39 Ensembl
GRCm38463,554,595 - 63,586,357 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl463,558,781 - 63,586,357 (+)EnsemblGRCm38mm10GRCm38
MGSCv37463,221,394 - 63,247,387 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36463,046,717 - 63,072,716 (+)NCBIMGSCv36mm8
Celera462,220,497 - 62,246,496 (+)NCBICelera
Cytogenetic Map4B3NCBI
cM Map434.02NCBI
Tmem268
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8581,990,314 - 82,016,970 (+)NCBIGRCr8
mRatBN7.2576,974,827 - 77,001,457 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl576,977,310 - 77,001,452 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx579,376,857 - 79,399,405 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0581,194,015 - 81,216,596 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0581,169,513 - 81,192,092 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0579,380,987 - 79,407,435 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl579,382,096 - 79,407,433 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0583,496,166 - 83,521,434 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4580,531,483 - 80,555,551 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1580,537,321 - 80,558,939 (+)NCBI
Celera575,911,346 - 75,935,194 (+)NCBICelera
Cytogenetic Map5q24NCBI
Tmem268
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541913,003,302 - 13,033,242 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541913,003,302 - 13,037,942 (-)NCBIChiLan1.0ChiLan1.0
TMEM268
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21124,732,298 - 24,766,814 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1924,724,949 - 24,768,522 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0985,709,124 - 85,743,723 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19114,071,930 - 114,106,330 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9114,076,644 - 114,108,086 (+)Ensemblpanpan1.1panPan2
TMEM268
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11168,767,517 - 68,793,164 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1168,767,504 - 68,791,368 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1167,168,639 - 67,194,756 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01169,890,513 - 69,916,650 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1169,890,513 - 69,916,641 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11168,405,545 - 68,431,684 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01168,445,815 - 68,471,917 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01169,176,702 - 69,203,116 (+)NCBIUU_Cfam_GSD_1.0
Tmem268
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947184,050,317 - 184,073,599 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364873,805,423 - 3,841,304 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364873,818,853 - 3,844,043 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM268
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1255,171,244 - 255,193,638 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11255,168,666 - 255,195,980 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21286,221,263 - 286,241,272 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM268
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11224,945,496 - 24,981,045 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1224,947,908 - 24,976,239 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603517,850,114 - 17,887,791 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem268
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476020,589,648 - 20,617,455 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476020,588,944 - 20,617,070 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TMEM268
10 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 9q22.33-33.1(chr9:99138048-115011033)x1 copy number loss See cases [RCV000050315] Chr9:99138048..115011033 [GRCh38]
Chr9:101900330..117773312 [GRCh37]
Chr9:100940151..116813133 [NCBI36]
Chr9:9q22.33-33.1		 pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain See cases [RCV000050348] Chr9:193412..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3		 pathogenic
GRCh38/hg38 9q32(chr9:114246876-114637081)x3 copy number gain See cases [RCV000052236] Chr9:114246876..114637081 [GRCh38]
Chr9:117009156..117399361 [GRCh37]
Chr9:116048977..116439182 [NCBI36]
Chr9:9q32		 uncertain significance
GRCh38/hg38 9q32(chr9:114270395-114677524)x3 copy number gain See cases [RCV000052237] Chr9:114270395..114677524 [GRCh38]
Chr9:117032675..117439804 [GRCh37]
Chr9:116072496..116479625 [NCBI36]
Chr9:9q32		 uncertain significance
GRCh38/hg38 9q22.33-33.1(chr9:99349916-115767475)x1 copy number loss See cases [RCV000052921] Chr9:99349916..115767475 [GRCh38]
Chr9:102112198..118529754 [GRCh37]
Chr9:101152019..117569575 [NCBI36]
Chr9:9q22.33-33.1		 pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124532)x3 copy number gain See cases [RCV000053745] Chr9:193412..138124532 [GRCh38]
Chr9:204193..141018984 [GRCh37]
Chr9:194193..140138805 [NCBI36]
Chr9:9p24.3-q34.3		 pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138114463)x3 copy number gain See cases [RCV000053746] Chr9:193412..138114463 [GRCh38]
Chr9:214367..141008915 [GRCh37]
Chr9:204367..140128736 [NCBI36]
Chr9:9p24.3-q34.3		 pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|See cases [RCV000053748] Chr9:193412..138179445 [GRCh38]
Chr9:266045..141073897 [GRCh37]
Chr9:256045..140193718 [NCBI36]
Chr9:9p24.3-q34.3		 pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:204193-138179445) copy number gain See cases [RCV000133791] Chr9:204193..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3		 pathogenic
GRCh38/hg38 9q32(chr9:114246889-114637174)x3 copy number gain See cases [RCV000138841] Chr9:114246889..114637174 [GRCh38]
Chr9:117009169..117399454 [GRCh37]
Chr9:116048990..116439275 [NCBI36]
Chr9:9q32		 likely benign
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124524)x3 copy number gain See cases [RCV000138783] Chr9:193412..138124524 [GRCh38]
Chr9:204090..141018976 [GRCh37]
Chr9:194090..140138797 [NCBI36]
Chr9:9p24.3-q34.3		 pathogenic
GRCh38/hg38 9p11.2-q34.3(chr9:193412-138159073)x3 copy number gain See cases [RCV000139207] Chr9:193412..138159073 [GRCh38]
Chr9:68420641..141053525 [GRCh37]
Chr9:67910461..140173346 [NCBI36]
Chr9:9p11.2-q34.3		 pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138159073)x3 copy number gain See cases [RCV000138962] Chr9:193412..138159073 [GRCh38]
Chr9:204104..141053525 [GRCh37]
Chr9:194104..140173346 [NCBI36]
Chr9:9p24.3-q34.3		 pathogenic|conflicting data from submitters
GRCh38/hg38 9q31.2-33.1(chr9:107530314-117965944)x1 copy number loss See cases [RCV000140794] Chr9:107530314..117965944 [GRCh38]
Chr9:110292595..120728222 [GRCh37]
Chr9:109332416..119768043 [NCBI36]
Chr9:9q31.2-33.1		 pathogenic
GRCh38/hg38 9q32(chr9:114193726-114677465)x3 copy number gain See cases [RCV000140795] Chr9:114193726..114677465 [GRCh38]
Chr9:116956006..117439745 [GRCh37]
Chr9:115995827..116479566 [NCBI36]
Chr9:9q32		 benign
GRCh38/hg38 9p24.3-q34.3(chr9:203861-138125937)x3 copy number gain See cases [RCV000141876] Chr9:203861..138125937 [GRCh38]
Chr9:203861..141020389 [GRCh37]
Chr9:193861..140140210 [NCBI36]
Chr9:9p24.3-q34.3		 pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:203862-138125937)x3 copy number gain See cases [RCV000143476] Chr9:203862..138125937 [GRCh38]
Chr9:203862..141020389 [GRCh37]
Chr9:193862..140140210 [NCBI36]
Chr9:9p24.3-q34.3		 pathogenic
GRCh38/hg38 9q22.33-33.1(chr9:99138048-115011033)x1 copy number loss See cases [RCV000148264] Chr9:99138048..115011033 [GRCh38]
Chr9:101900330..117773312 [GRCh37]
Chr9:100940151..116813133 [NCBI36]
Chr9:9q22.33-33.1		 pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain See cases [RCV000148113] Chr9:193412..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:163131-141122114)x3 copy number gain See cases [RCV000240081] Chr9:163131..141122114 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:62525-141006407) copy number gain See cases [RCV000449375] Chr9:62525..141006407 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9q31.3-33.1(chr9:111348809-118687200)x1 copy number loss See cases [RCV000449308] Chr9:111348809..118687200 [GRCh37]
Chr9:9q31.3-33.1		 pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020389)x3 copy number gain not specified [RCV003986800] Chr9:203861..141020389 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203864-141020389)x3 copy number gain See cases [RCV000448978] Chr9:203864..141020389 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9q31.1-33.3(chr9:104604851-126253089)x1 copy number loss See cases [RCV000447763] Chr9:104604851..126253089 [GRCh37]
Chr9:9q31.1-33.3		 pathogenic
GRCh37/hg19 9q31.3-33.2(chr9:114299780-123267736)x1 copy number loss See cases [RCV000511049] Chr9:114299780..123267736 [GRCh37]
Chr9:9q31.3-33.2		 pathogenic
GRCh37/hg19 9q21.11-34.3(chr9:71069743-140999928) copy number gain Global developmental delay [RCV000626548] Chr9:71069743..140999928 [GRCh37]
Chr9:9q21.11-34.3		 likely pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203862-141020389) copy number gain See cases [RCV000512392] Chr9:203862..141020389 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141114095)x2 copy number gain not provided [RCV000748054] Chr9:10590..141114095 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9q31.3-33.3(chr9:113083182-126779494)x1 copy number loss not provided [RCV000748606] Chr9:113083182..126779494 [GRCh37]
Chr9:9q31.3-33.3		 pathogenic
GRCh37/hg19 9q32(chr9:117054195-117502242)x3 copy number gain not provided [RCV000748633] Chr9:117054195..117502242 [GRCh37]
Chr9:9q32		 benign
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141122247)x3 copy number gain not provided [RCV000748055] Chr9:10590..141122247 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141107672)x3 copy number gain not provided [RCV000748053] Chr9:10590..141107672 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:46587-141066491)x3 copy number gain not provided [RCV000748063] Chr9:46587..141066491 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9q32(chr9:116936770-117450535)x3 copy number gain not provided [RCV000848120] Chr9:116936770..117450535 [GRCh37]
Chr9:9q32		 uncertain significance
GRCh37/hg19 9q32(chr9:116642144-117613527)x1 copy number loss not provided [RCV001006255] Chr9:116642144..117613527 [GRCh37]
Chr9:9q32		 uncertain significance
GRCh37/hg19 9q21.11-34.3(chr9:71416475-141020389)x3 copy number gain not provided [RCV000847808] Chr9:71416475..141020389 [GRCh37]
Chr9:9q21.11-34.3		 pathogenic
GRCh37/hg19 9q31.3-32(chr9:113982711-117443628)x1 copy number loss not provided [RCV000847543] Chr9:113982711..117443628 [GRCh37]
Chr9:9q31.3-32		 uncertain significance
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020388)x3 copy number gain not provided [RCV000845900] Chr9:203861..141020388 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9q32(chr9:117270143-117497954)x1 copy number loss not provided [RCV001006257] Chr9:117270143..117497954 [GRCh37]
Chr9:9q32		 uncertain significance
GRCh37/hg19 9q32(chr9:117324844-117443628)x1 copy number loss not provided [RCV001259042] Chr9:117324844..117443628 [GRCh37]
Chr9:9q32		 uncertain significance
GRCh37/hg19 9p24.3-q34.3(chr9:353349-141020389) copy number gain not specified [RCV002053823] Chr9:353349..141020389 [GRCh37]
Chr9:9p24.3-q34.3		 pathogenic
GRCh37/hg19 9q31.1-33.3(chr9:104604851-126253089) copy number loss not specified [RCV002052825] Chr9:104604851..126253089 [GRCh37]
Chr9:9q31.1-33.3		 pathogenic
GRCh37/hg19 9q32-34.11(chr9:116422275-131713233) copy number gain not specified [RCV002052831] Chr9:116422275..131713233 [GRCh37]
Chr9:9q32-34.11		 pathogenic
GRCh37/hg19 9q32-33.1(chr9:116506015-119942279) copy number loss not specified [RCV002052832] Chr9:116506015..119942279 [GRCh37]
Chr9:9q32-33.1		 uncertain significance
GRCh37/hg19 9q31.2-32(chr9:109265628-117650999) copy number loss not specified [RCV002052828] Chr9:109265628..117650999 [GRCh37]
Chr9:9q31.2-32		 likely pathogenic
GRCh37/hg19 9q21.11-33.2(chr9:71349994-122603410) copy number gain not specified [RCV002053853] Chr9:71349994..122603410 [GRCh37]
Chr9:9q21.11-33.2		 likely pathogenic
GRCh37/hg19 9p22.1-q33.1(chr9:19356861-119513311) copy number loss Distal tetrasomy 15q [RCV002280776] Chr9:19356861..119513311 [GRCh37]
Chr9:9p22.1-q33.1		 uncertain significance
GRCh37/hg19 9p24.3-q34.11(chr9:203861-131603223)x3 copy number gain See cases [RCV002292402] Chr9:203861..131603223 [GRCh37]
Chr9:9p24.3-q34.11		 pathogenic
NM_153045.4(TMEM268):c.421G>A (p.Ala141Thr) single nucleotide variant not specified [RCV004093215] Chr9:114628197 [GRCh38]
Chr9:117390477 [GRCh37]
Chr9:9q32		 uncertain significance
NM_153045.4(TMEM268):c.1012C>T (p.Pro338Ser) single nucleotide variant not specified [RCV004113625] Chr9:114643296 [GRCh38]
Chr9:117405576 [GRCh37]
Chr9:9q32		 uncertain significance
NM_153045.4(TMEM268):c.788C>T (p.Pro263Leu) single nucleotide variant not specified [RCV004111320] Chr9:114638665 [GRCh38]
Chr9:117400945 [GRCh37]
Chr9:9q32		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2071
Count of miRNA genes:940
Interacting mature miRNAs:1105
Transcripts:ENST00000288502, ENST00000374049, ENST00000471206, ENST00000482552
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
CHLC.GGAT3C11  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379117,392,540 - 117,392,706UniSTSGRCh37
Build 369116,432,361 - 116,432,527RGDNCBI36
Celera988,040,196 - 88,040,362RGD
Cytogenetic Map9q32UniSTS
HuRef986,997,603 - 86,997,777UniSTS
Whitehead-YAC Contig Map9 UniSTS
NIB917  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379117,407,503 - 117,407,665UniSTSGRCh37
Build 369116,447,324 - 116,447,486RGDNCBI36
Celera988,055,148 - 88,055,310RGD
Cytogenetic Map9q32UniSTS
HuRef987,012,412 - 87,012,574UniSTS
GeneMap99-GB4 RH Map9357.94UniSTS
Whitehead-RH Map9429.0UniSTS
NCBI RH Map91004.2UniSTS
G35303  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379117,406,547 - 117,406,653UniSTSGRCh37
Build 369116,446,368 - 116,446,474RGDNCBI36
Celera988,054,192 - 88,054,298RGD
Cytogenetic Map9q32UniSTS
HuRef987,011,456 - 87,011,562UniSTS
SHGC-154091  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379117,390,394 - 117,390,728UniSTSGRCh37
Build 369116,430,215 - 116,430,549RGDNCBI36
Celera988,038,050 - 88,038,384RGD
Cytogenetic Map9q32UniSTS
HuRef986,995,457 - 86,995,791UniSTS
TNG Radiation Hybrid Map99998.0UniSTS
RH11942  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379117,408,445 - 117,408,603UniSTSGRCh37
Build 369116,448,266 - 116,448,424RGDNCBI36
Celera988,056,090 - 88,056,248RGD
Cytogenetic Map9q32UniSTS
HuRef987,013,354 - 87,013,512UniSTS
GeneMap99-GB4 RH Map9357.94UniSTS
NCBI RH Map91004.2UniSTS
G35510  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1q21UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map2p25-p24UniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map6pter-q22.33UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map11q14.2-q21UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map9p21.3UniSTS
Cytogenetic Map7p15.1UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map5q31-q32UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map18p11.22-p11.21UniSTS
Cytogenetic Map5q34-q35UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic MapXp22.32UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map6pter-p12.1UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map20q13.33UniSTS
L18426  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map18q12.1-q21.1UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map20q13.1UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map10p11UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map19p13.1-p12UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map2p23.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map9q21.32UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map8p23-p22UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic Map17q21-q22UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map5p13UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map2p25UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map1p21.3UniSTS
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map4q22.1-q23UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map17q22-q23.2UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map12q24.1-q24.3UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map9p24.2UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map1q42.1-q43UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map6q25.1-q26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17q23.1UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map1q41-q42.2UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map11p11.11UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map21q22.1UniSTS
Cytogenetic Map4q25-q27UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map6q25UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map21q21.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map12p12.3UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map22q12UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map1p13-p12UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map10q21.1UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map20p11.21UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map16p13.13-p13.12UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map14q22-q24UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map10q11UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map12q21.31UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map9p21.1UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1084 360 776 159 1083 25 980 401 1439 142 1002 1109 144 709 256 1
Low 1355 2585 950 465 856 440 3376 1759 2295 277 458 504 30 1 495 2532 5 2
Below cutoff 46 12 37

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001330760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_153045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001746225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001746226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007061260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF038174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK095364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK098022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK289383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL160275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL557166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL834412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW963631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC107133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC107134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI553818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ049157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX649023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB121579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB199443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY066490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000288502   ⟹   ENSP00000288502
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9114,611,291 - 114,646,422 (+)Ensembl
RefSeq Acc Id: ENST00000374049   ⟹   ENSP00000363161
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9114,611,206 - 114,646,422 (+)Ensembl
RefSeq Acc Id: ENST00000471206
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9114,611,458 - 114,628,225 (+)Ensembl
RefSeq Acc Id: ENST00000482552
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9114,643,267 - 114,644,704 (+)Ensembl
RefSeq Acc Id: NM_001330760   ⟹   NP_001317689
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,646,422 (+)NCBI
T2T-CHM13v2.09126,803,709 - 126,838,835 (+)NCBI
Sequence:
RefSeq Acc Id: NM_153045   ⟹   NP_694590
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,646,422 (+)NCBI
GRCh379117,373,706 - 117,408,703 (+)RGD
Build 369116,413,527 - 116,448,524 (+)NCBI Archive
Celera988,021,359 - 88,056,348 (+)RGD
HuRef986,978,868 - 87,013,612 (+)ENTREZGENE
CHM1_19117,520,317 - 117,555,292 (+)NCBI
T2T-CHM13v2.09126,803,709 - 126,838,835 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518350   ⟹   XP_011516652
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,646,422 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518351   ⟹   XP_011516653
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,603,904 - 114,646,422 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518352   ⟹   XP_011516654
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,646,422 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518353   ⟹   XP_011516655
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,646,422 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518354   ⟹   XP_011516656
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,617,214 - 114,646,422 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518355   ⟹   XP_011516657
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,617,214 - 114,646,422 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017014430   ⟹   XP_016869919
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,617,214 - 114,646,422 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024447441   ⟹   XP_024303209
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,571 - 114,646,422 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047422923   ⟹   XP_047278879
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,646,422 (+)NCBI
RefSeq Acc Id: XM_047422924   ⟹   XP_047278880
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,620 - 114,646,422 (+)NCBI
RefSeq Acc Id: XM_047422925   ⟹   XP_047278881
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,603,918 - 114,646,422 (+)NCBI
RefSeq Acc Id: XM_047422927   ⟹   XP_047278883
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,646,422 (+)NCBI
RefSeq Acc Id: XM_047422928   ⟹   XP_047278884
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,646,422 (+)NCBI
RefSeq Acc Id: XM_047422929   ⟹   XP_047278885
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,617,214 - 114,646,422 (+)NCBI
RefSeq Acc Id: XM_054362257   ⟹   XP_054218232
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,803,709 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362258   ⟹   XP_054218233
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,796,322 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362259   ⟹   XP_054218234
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,803,709 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362260   ⟹   XP_054218235
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,803,709 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362261   ⟹   XP_054218236
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,803,709 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362262   ⟹   XP_054218237
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,804,038 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362263   ⟹   XP_054218238
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,796,336 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362264   ⟹   XP_054218239
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,803,989 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362265   ⟹   XP_054218240
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,809,632 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362266   ⟹   XP_054218241
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,809,632 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362267   ⟹   XP_054218242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,803,709 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362268   ⟹   XP_054218243
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,803,709 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362269   ⟹   XP_054218244
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,809,632 - 126,838,835 (+)NCBI
RefSeq Acc Id: XM_054362270   ⟹   XP_054218245
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,809,632 - 126,838,835 (+)NCBI
RefSeq Acc Id: XR_001746225
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,645,689 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001746226
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,645,689 (+)NCBI
Sequence:
RefSeq Acc Id: XR_007061260
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,645,689 (+)NCBI
RefSeq Acc Id: XR_008487959
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,803,709 - 126,838,102 (+)NCBI
RefSeq Acc Id: XR_008487960
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,803,709 - 126,838,102 (+)NCBI
RefSeq Acc Id: XR_008487961
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09126,803,709 - 126,838,102 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001317689 (Get FASTA)   NCBI Sequence Viewer  
  NP_694590 (Get FASTA)   NCBI Sequence Viewer  
  XP_011516652 (Get FASTA)   NCBI Sequence Viewer  
  XP_011516653 (Get FASTA)   NCBI Sequence Viewer  
  XP_011516654 (Get FASTA)   NCBI Sequence Viewer  
  XP_011516655 (Get FASTA)   NCBI Sequence Viewer  
  XP_011516656 (Get FASTA)   NCBI Sequence Viewer  
  XP_011516657 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869919 (Get FASTA)   NCBI Sequence Viewer  
  XP_024303209 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278879 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278880 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278881 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278883 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278884 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278885 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218232 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218233 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218234 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218235 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218236 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218237 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218238 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218239 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218240 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218241 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218242 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218243 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218244 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218245 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH19913 (Get FASTA)   NCBI Sequence Viewer  
  AAH62550 (Get FASTA)   NCBI Sequence Viewer  
  AAI07134 (Get FASTA)   NCBI Sequence Viewer  
  AAI07135 (Get FASTA)   NCBI Sequence Viewer  
  BAC04537 (Get FASTA)   NCBI Sequence Viewer  
  BAF82072 (Get FASTA)   NCBI Sequence Viewer  
  CAD39074 (Get FASTA)   NCBI Sequence Viewer  
  EAW87426 (Get FASTA)   NCBI Sequence Viewer  
  EAW87427 (Get FASTA)   NCBI Sequence Viewer  
  EAW87428 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000288502
  ENSP00000288502.4
  ENSP00000363161
  ENSP00000363161.4
GenBank Protein Q5VZI3 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_694590   ⟸   NM_153045
- Peptide Label: isoform 1
- UniProtKB: Q8N1P3 (UniProtKB/Swiss-Prot),   Q6P5Z7 (UniProtKB/Swiss-Prot),   Q5VZI2 (UniProtKB/Swiss-Prot),   Q3KNS4 (UniProtKB/Swiss-Prot),   A0PJA3 (UniProtKB/Swiss-Prot),   Q8ND43 (UniProtKB/Swiss-Prot),   Q5VZI3 (UniProtKB/Swiss-Prot),   A8K018 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011516653   ⟸   XM_011518351
- Peptide Label: isoform X1
- UniProtKB: A8K018 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011516656   ⟸   XM_011518354
- Peptide Label: isoform X7
- UniProtKB: A8K018 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011516657   ⟸   XM_011518355
- Peptide Label: isoform X8
- UniProtKB: A8K018 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011516652   ⟸   XM_011518350
- Peptide Label: isoform X1
- UniProtKB: A8K018 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011516655   ⟸   XM_011518353
- Peptide Label: isoform X3
- UniProtKB: A8K018 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011516654   ⟸   XM_011518352
- Peptide Label: isoform X2
- UniProtKB: A8K018 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016869919   ⟸   XM_017014430
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: NP_001317689   ⟸   NM_001330760
- Peptide Label: isoform 2
- UniProtKB: A8K018 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024303209   ⟸   XM_024447441
- Peptide Label: isoform X6
- UniProtKB: Q8N1P3 (UniProtKB/Swiss-Prot),   Q6P5Z7 (UniProtKB/Swiss-Prot),   Q5VZI3 (UniProtKB/Swiss-Prot),   Q5VZI2 (UniProtKB/Swiss-Prot),   Q3KNS4 (UniProtKB/Swiss-Prot),   A0PJA3 (UniProtKB/Swiss-Prot),   Q8ND43 (UniProtKB/Swiss-Prot),   A8K018 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000363161   ⟸   ENST00000374049
RefSeq Acc Id: ENSP00000288502   ⟸   ENST00000288502
RefSeq Acc Id: XP_047278881   ⟸   XM_047422925
- Peptide Label: isoform X6
- UniProtKB: Q8N1P3 (UniProtKB/Swiss-Prot),   Q6P5Z7 (UniProtKB/Swiss-Prot),   Q5VZI3 (UniProtKB/Swiss-Prot),   Q5VZI2 (UniProtKB/Swiss-Prot),   Q3KNS4 (UniProtKB/Swiss-Prot),   A0PJA3 (UniProtKB/Swiss-Prot),   Q8ND43 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047278879   ⟸   XM_047422923
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047278883   ⟸   XM_047422927
- Peptide Label: isoform X9
RefSeq Acc Id: XP_047278884   ⟸   XM_047422928
- Peptide Label: isoform X10
RefSeq Acc Id: XP_047278880   ⟸   XM_047422924
- Peptide Label: isoform X5
RefSeq Acc Id: XP_047278885   ⟸   XM_047422929
- Peptide Label: isoform X11
RefSeq Acc Id: XP_054218233   ⟸   XM_054362258
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054218238   ⟸   XM_054362263
- Peptide Label: isoform X6
- UniProtKB: Q8N1P3 (UniProtKB/Swiss-Prot),   Q6P5Z7 (UniProtKB/Swiss-Prot),   Q5VZI3 (UniProtKB/Swiss-Prot),   Q5VZI2 (UniProtKB/Swiss-Prot),   Q3KNS4 (UniProtKB/Swiss-Prot),   A0PJA3 (UniProtKB/Swiss-Prot),   Q8ND43 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054218232   ⟸   XM_054362257
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054218235   ⟸   XM_054362260
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054218234   ⟸   XM_054362259
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054218236   ⟸   XM_054362261
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054218242   ⟸   XM_054362267
- Peptide Label: isoform X9
RefSeq Acc Id: XP_054218243   ⟸   XM_054362268
- Peptide Label: isoform X10
RefSeq Acc Id: XP_054218239   ⟸   XM_054362264
- Peptide Label: isoform X6
- UniProtKB: Q8N1P3 (UniProtKB/Swiss-Prot),   Q6P5Z7 (UniProtKB/Swiss-Prot),   Q5VZI3 (UniProtKB/Swiss-Prot),   Q5VZI2 (UniProtKB/Swiss-Prot),   Q3KNS4 (UniProtKB/Swiss-Prot),   A0PJA3 (UniProtKB/Swiss-Prot),   Q8ND43 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054218237   ⟸   XM_054362262
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054218240   ⟸   XM_054362265
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054218244   ⟸   XM_054362269
- Peptide Label: isoform X11
RefSeq Acc Id: XP_054218241   ⟸   XM_054362266
- Peptide Label: isoform X8
RefSeq Acc Id: XP_054218245   ⟸   XM_054362270
- Peptide Label: isoform X12

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5VZI3-F1-model_v2 AlphaFold Q5VZI3 1-342 view protein structure

Promoters
RGD ID:7215981
Promoter ID:EPDNEW_H13736
Type:initiation region
Name:C9orf91_1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H13737  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,611,291 - 114,611,351EPDNEW
RGD ID:7215985
Promoter ID:EPDNEW_H13737
Type:multiple initiation site
Name:C9orf91_2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H13736  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh389114,614,032 - 114,614,092EPDNEW
RGD ID:6807354
Promoter ID:HG_KWN:64653
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000053779,   OTTHUMT00000053780,   OTTHUMT00000053781,   UC004BJE.2
Position:
Human AssemblyChrPosition (strand)Source
Build 369116,412,741 - 116,413,557 (+)MPROMDB
RGD ID:6813591
Promoter ID:HG_ACW:82067
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:C9ORF91.AAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 369116,418,964 - 116,419,464 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:24513 AgrOrtholog
COSMIC TMEM268 COSMIC
Ensembl Genes ENSG00000157693 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000288502 ENTREZGENE
  ENST00000288502.9 UniProtKB/Swiss-Prot
  ENST00000374049 ENTREZGENE
  ENST00000374049.4 UniProtKB/Swiss-Prot
GTEx ENSG00000157693 GTEx
HGNC ID HGNC:24513 ENTREZGENE
Human Proteome Map TMEM268 Human Proteome Map
InterPro DUF4481 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:203197 UniProtKB/Swiss-Prot
NCBI Gene 203197 ENTREZGENE
PANTHER PTHR31193 UniProtKB/Swiss-Prot
  TRANSMEMBRANE PROTEIN 268 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN C9ORF91 UniProtKB/TrEMBL
Pfam DUF4481 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134931542 PharmGKB
UniProt A0PJA3 ENTREZGENE
  A8K018 ENTREZGENE, UniProtKB/TrEMBL
  Q3KNS4 ENTREZGENE
  Q5VZI2 ENTREZGENE
  Q5VZI3 ENTREZGENE
  Q6P5Z7 ENTREZGENE
  Q8N1P3 ENTREZGENE
  Q8ND43 ENTREZGENE
  TM268_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A0PJA3 UniProtKB/Swiss-Prot
  Q3KNS4 UniProtKB/Swiss-Prot
  Q5VZI2 UniProtKB/Swiss-Prot
  Q6P5Z7 UniProtKB/Swiss-Prot
  Q8N1P3 UniProtKB/Swiss-Prot
  Q8ND43 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-28 TMEM268  transmembrane protein 268  C9orf91  chromosome 9 open reading frame 91  Symbol and/or name change 5135510 APPROVED