D5S1632E Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: D5S1632E

Symbol: D5S1632E
Previously known as: Cda0wa03; GDB:442971; GDB:448601; 
RGD ID: 2132581
Expected Size: 109 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375148,748,986 - 148,749,094UniSTSGRCh37
Build 365148,729,179 - 148,729,287RGDNCBI36
Celera5144,830,963 - 144,831,071RGD
Cytogenetic Map5q32UniSTS
HuRef5143,895,312 - 143,895,420UniSTS
GeneMap99-GB4 RH Map5575.09UniSTS
NCBI RH Map5891.6UniSTS
Is Marker For: Genes:   PCYOX1L  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CTAACCTCTGAAGAATCC
Reverse Primer TAAAGAAGAGAAGTCCCC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_024028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC008681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK090410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK127281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001613.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G22472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297847.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976330.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 78991 UniSTS
UniSTS D5S1632E UniSTS SSLP Pipeline