Il17a (interleukin 17A) - Rat Genome Database

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Gene: Il17a (interleukin 17A) Rattus norvegicus
Analyze
Symbol: Il17a
Name: interleukin 17A
RGD ID: 2888
Description: Predicted to enable cytokine activity; protein heterodimerization activity; and protein homodimerization activity. Involved in cellular response to glucocorticoid stimulus; positive regulation of transcription by RNA polymerase II; and response to amino acid. Located in extracellular space. Used to study anti-basement membrane glomerulonephritis; congestive heart failure; myocarditis; pleurisy; and uveitis. Biomarker of several diseases, including acute necrotizing pancreatitis; inflammatory bowel disease (multiple); lung disease (multiple); myocardial infarction (multiple); and periodontal disease (multiple). Human ortholog(s) of this gene implicated in Mycobacterium avium complex disease; autoimmune disease (multiple); bronchial disease (multiple); macular degeneration; and rhinitis (multiple). Orthologous to human IL17A (interleukin 17A); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; INTERACTS WITH 1-chloro-2,4-dinitrobenzene; 2,4,6-trinitrobenzenesulfonic acid; 7,12-dimethyltetraphene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: CTLA-8; cytotoxic T-lymphocyte-associated antigen 8; hypothetical protein LOC301289; IL-17; IL-17A; Il17; interleukin 17; Interleukin 17 (cytotoxic T-lymphocyte-associated serine esterase 8); interleukin-17A; LOC301289; similar to Interleukin-17 precursor (IL-17) (Cytotoxic T lymphocyte-associated antigen 8) (CTLA-8)
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8930,640,844 - 30,644,331 (+)NCBIGRCr8
mRatBN7.2923,144,402 - 23,147,889 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl923,144,402 - 23,147,889 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx931,641,574 - 31,645,060 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0936,762,293 - 36,765,779 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0935,077,566 - 35,081,052 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0926,841,299 - 26,844,786 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl926,841,299 - 26,844,786 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0925,696,865 - 25,700,352 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4919,454,979 - 19,458,467 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1919,453,469 - 19,455,797 (+)NCBI
Celera920,720,899 - 20,724,386 (+)NCBICelera
Cytogenetic Map9q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
Il17aRatacne  ISOIL17A (Homo sapiens)8698671protein:increased expression:pilosebaceous unit and dermis (human)RGD 
Il17aRatacute myocardial infarction amelioratesIEP 267358468 RGD 
Il17aRatacute necrotizing pancreatitis  IEP 9068935protein:increased expression:pancreas and serum (rat)RGD 
Il17aRatAcute Otitis Media disease_progressionIEP 40818299protein:increased expression:serum (rat)RGD 
Il17aRatallergic rhinitis  ISOIL17A (Homo sapiens)5147409mRNA:increased expression:peripheral blood mononuclear cell (human)RGD 
Il17aRatallergic rhinitis susceptibilityISOIL17A (Homo sapiens)9068429DNA:snp:promoter:c.-444A>G (human)RGD 
Il17aRatAnimal Toxoplasmosis  ISOIl17a (Mus musculus)38501105mRNA and protein:increased expression:placenta:RGD 
Il17aRatankylosing spondylitis treatmentISOIL17A (Homo sapiens)9068448 RGD 
Il17aRatanti-basement membrane glomerulonephritis treatmentIDA 7365004 RGD 
Il17aRatArterial Thrombosis  ISOIl17a (Mus musculus)9068933mouse protein in a rat modelRGD 
Il17aRatasthma  ISOIL17A (Homo sapiens)4889114protein:increased expression:sputumRGD 
Il17aRatasthma  ISOIl17a (Mus musculus)4888527 RGD 
Il17aRatasthma  ISOIL17A (Homo sapiens)4889152protein:increased expression:alveolar macrophageRGD 
Il17aRatasthma susceptibilityISOIL17A (Homo sapiens)4889139DNA:SNP:promoter:rs2275913 (human)RGD 
Il17aRatasthma  IEP 4839043mRNA more ...RGD 
Il17aRatatherosclerosis treatmentISOIl17a (Mus musculus)9170237 RGD 
Il17aRatatopic dermatitis severityISOIL17A (Homo sapiens)9068436protein:increased expression:dermis and lymphocyte (human)RGD 
Il17aRatatopic dermatitis treatmentISOIl17a (Mus musculus)8698670 RGD 
Il17aRatatopic dermatitis  ISOIl17a (Mus musculus)9068417protein:increased expression:epidermis (mouse)RGD 
Il17aRatautoimmune thyroiditis  ISOIl17a (Mus musculus)4841878protein:increased expression:thyroid glandRGD 
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Original Reference(s)
Il17aRatAcute Lung Injury  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:28600744
Il17aRatacute promyelocytic leukemia  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:22617429
Il17aRatallergic disease  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21625544
Il17aRatautoimmune disease  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21227906
Il17aRatbrain ischemia  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15829914
Il17aRatcardiovascular system disease  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:29114965
Il17aRatcentral nervous system disease  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19940258
Il17aRatcerebrovascular disease  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:29114965
Il17aRatChemical and Drug Induced Liver Injury  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19633216 and PMID:24949944
Il17aRatChemically-Induced Disorders  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:36108500
Il17aRatcolitis  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:24548422
Il17aRatDrug Eruptions  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:31150805
Il17aRatEmphysema  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:27380433
Il17aRatExperimental Arthritis  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:20974942
Il17aRatgraft-versus-host disease  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:22077062
Il17aRatGraves' disease  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:33132244
Il17aRatInflammation  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:22617429
Il17aRatkidney disease  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:37815028
Il17aRatlymphoproliferative syndrome  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:22617429
Il17aRatMPTP Poisoning  ISOIL17A (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:31351185
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Original Reference(s)
Il17aRat(+)-Tetrandrine multiple interactionsISOIl17a (Mus musculus)6480464resveratrol inhibits the reaction [tetrandrine inhibits the reaction [COL2A1 protein results in increased expression of IL17A protein]] and tetrandrine inhibits the reaction [COL2A1 protein results in increased expression of IL17A protein]CTDPMID:26640276
Il17aRat(+)-Tetrandrine decreases expressionISOIl17a (Mus musculus)6480464tetrandrine results in decreased expression of IL17A mRNACTDPMID:26640276
Il17aRat(R,R,R)-alpha-tocopherol multiple interactionsISOIl17a (Mus musculus)6480464alpha-Tocopherol inhibits the reaction [Ozone promotes the reaction [Ovalbumin results in increased expression of IL17A mRNA]]CTDPMID:29284473
Il17aRat(S)-nicotine multiple interactionsISOIL17A (Homo sapiens)6480464[Lipopolysaccharides co-treated with Nicotine] results in increased expression of IL17A mRNA more ...CTDPMID:23199342
Il17aRat(Z)-ligustilide multiple interactionsISOIl17a (Mus musculus)6480464ligustilide inhibits the reaction [Dextran Sulfate results in increased expression of IL17A mRNA]CTDPMID:33130971
Il17aRat1-(4'-hydroxy-3'-methoxyphenyl)-7-phenyl-3-heptanone multiple interactionsISOIl17a (Mus musculus)6480464yakuchinone-A inhibits the reaction [[Tetradecanoylphorbol Acetate co-treated with Ionomycin] results in increased expression of and results in increased secretion of IL17A protein]CTDPMID:31001353
Il17aRat1-chloro-2,4-dinitrobenzene multiple interactionsISOIl17a (Mus musculus)6480464[Antigens more ...CTDPMID:23133493 and PMID:23499868
Il17aRat1-chloro-2,4-dinitrobenzene increases expressionEXP 6480464Dinitrochlorobenzene results in increased expression of IL17A mRNACTDPMID:25449201
Il17aRat1-chloro-2,4-dinitrobenzene increases expressionISOIl17a (Mus musculus)6480464Dinitrochlorobenzene results in increased expression of IL17A mRNACTDPMID:23133493
Il17aRat1-fluoro-2,4-dinitrobenzene increases expressionISOIl17a (Mus musculus)6480464Dinitrofluorobenzene results in increased expression of IL17A mRNACTDPMID:23499868
Il17aRat1-fluoro-2,4-dinitrobenzene multiple interactionsISOIl17a (Mus musculus)6480464oleanolic acid 3-acetate inhibits the reaction [Dinitrofluorobenzene results in increased expression of IL17A mRNA]CTDPMID:23499868
Il17aRat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine increases expressionISOIl17a (Mus musculus)64804641-Methyl-4-phenyl-1 more ...CTDPMID:31351185
Il17aRat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine multiple interactionsISOIl17a (Mus musculus)6480464IL17A protein promotes the reaction [1-Methyl-4-phenyl-1 more ...CTDPMID:31351185
Il17aRat1-naphthyl isothiocyanate increases expressionISOIl17a (Mus musculus)64804641-Naphthylisothiocyanate results in increased expression of IL17A proteinCTDPMID:20594950
Il17aRat17alpha-ethynylestradiol multiple interactionsISOIl17a (Mus musculus)6480464[Ethinyl Estradiol co-treated with IL17A protein] results in increased secretion of ALPL protein more ...CTDPMID:36329302
Il17aRat17alpha-ethynylestradiol increases expressionISOIl17a (Mus musculus)6480464Ethinyl Estradiol results in increased expression of IL17A mRNA and Ethinyl Estradiol results in increased expression of IL17A proteinCTDPMID:36329302
Il17aRat17beta-estradiol multiple interactionsISOIl17a (Mus musculus)6480464Estradiol inhibits the reaction [Halothane results in increased expression of IL17A protein] and fulvestrant inhibits the reaction [Estradiol inhibits the reaction [Halothane results in increased expression of IL17A protein]]CTDPMID:21501669
Il17aRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOIl17a (Mus musculus)64804642-methyl-2H-pyrazole-3-carboxylic acid (2-methyl-4-o-tolylazophenyl)amide inhibits the reaction [Tetrachlorodibenzodioxin results in increased secretion of IL17A protein] more ...CTDPMID:21804081 more ...
Il17aRat2,3,7,8-tetrachlorodibenzodioxine increases secretionISOIl17a (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased secretion of IL17A proteinCTDPMID:32911021
Il17aRat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOIl17a (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of IL17A proteinCTDPMID:25716673

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Biological Process
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Original Reference(s)
Il17aRatadaptive immune response involved_inIEAUniProtKB-KW:KW-10641600115GO_REF:0000043UniProtGO_REF:0000043
Il17aRatcellular response to glucocorticoid stimulus  IMP 4888522 RGD 
Il17aRatcellular response to interleukin-1 acts_upstream_of_or_withinIEAUniProtKB:Q62386 and ensembl:ENSMUSP000000270611600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatcellular response to interleukin-1 acts_upstream_of_or_withinISOIl17a (Mus musculus)1624291 PMID:19666510RGDPMID:19666510
Il17aRatdefense response to fungus involved_inIEAUniProtKB:Q62386 and ensembl:ENSMUSP000000270611600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatdefense response to fungus involved_inISOIl17a (Mus musculus)1624291 PMID:20554964RGDPMID:20554964
Il17aRatdefense response to Gram-negative bacterium involved_inISOIl17a (Mus musculus)1624291 PMID:19144317RGDPMID:19144317
Il17aRatdefense response to Gram-negative bacterium involved_inIEAUniProtKB:Q62386 and ensembl:ENSMUSP000000270611600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatdefense response to Gram-positive bacterium involved_inIEAUniProtKB:Q62386 and ensembl:ENSMUSP000000270611600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatdefense response to Gram-positive bacterium involved_inISOIl17a (Mus musculus)1624291 PMID:19144317 and PMID:20364087RGDPMID:19144317 and PMID:20364087
Il17aRatfibroblast activation involved_inIEAUniProtKB:Q16552 and ensembl:ENSP000004979681600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatfibroblast activation involved_inISOIL17A (Homo sapiens)1624291 PMID:21145111RGDPMID:21145111
Il17aRatgene expression involved_inIEAUniProtKB:Q62386 and ensembl:ENSMUSP000000270611600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatgene expression involved_inISOIl17a (Mus musculus)1624291 PMID:31164412RGDPMID:31164412
Il17aRatgranulocyte migration involved_inISOIl17a (Mus musculus)1624291UniProtKB:P97797 and PMID:24026300RGDPMID:24026300
Il17aRatgranulocyte migration involved_inIEAUniProtKB:Q62386 and ensembl:ENSMUSP000000270611600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatimmune system process involved_inIEAUniProtKB-KW:KW-03911600115GO_REF:0000043UniProtGO_REF:0000043
Il17aRatinflammatory response involved_inIEAInterPro:IPR0204401600115GO_REF:0000002InterProGO_REF:0000002
Il17aRatinflammatory response involved_inIEAUniProtKB-KW:KW-03951600115GO_REF:0000043UniProtGO_REF:0000043
Il17aRatinnate immune response involved_inIEAUniProtKB-KW:KW-03991600115GO_REF:0000043UniProtGO_REF:0000043
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Cellular Component
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Molecular Function
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Original Reference(s)
Il17aRatcytokine activity enablesISOIL17A (Homo sapiens)1624291 PMID:12297109 and PMID:22727489RGDPMID:12297109 and PMID:22727489
Il17aRatcytokine activity enablesIEAInterPro:IPR010345 and InterPro:IPR0204401600115GO_REF:0000002InterProGO_REF:0000002
Il17aRatcytokine activity enablesISOIl17a (Mus musculus)1624291 PMID:22727489 and PMID:27830702RGDPMID:22727489 and PMID:27830702
Il17aRatcytokine activity enablesIEAUniProtKB:Q62386 and ensembl:ENSMUSP000000270611600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatcytokine activity enablesIEAUniProtKB-KW:KW-02021600115GO_REF:0000043UniProtGO_REF:0000043
Il17aRatcytokine activity enablesIEAUniProtKB:Q16552 and ensembl:ENSP000004979681600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatprotein binding enablesISOIL17A (Homo sapiens)1624291UniProtKB:Q6PIL6 more ...RGDPMID:23695682 more ...
Il17aRatprotein binding enablesISOIl17a (Mus musculus)1624291UniProtKB:Q7TNI7 and PMID:18025225RGDPMID:18025225
Il17aRatprotein heterodimerization activity enablesISOIl17a (Mus musculus)1624291 PMID:18025225RGDPMID:18025225
Il17aRatprotein heterodimerization activity enablesIEAUniProtKB:Q62386 and ensembl:ENSMUSP000000270611600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatprotein homodimerization activity enablesIEAUniProtKB:Q62386 and ensembl:ENSMUSP000000270611600115GO_REF:0000107EnsemblGO_REF:0000107
Il17aRatprotein homodimerization activity enablesISOIl17a (Mus musculus)1624291 PMID:18025225RGDPMID:18025225
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Imported Annotations - PID (archival)

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Original Reference(s)
Il17aRatinterleukin-23 signaling pathway  ISOIL17A (Homo sapiens)9068941 PIDPID:200154
Il17aRatinterleukin-27 signaling pathway  ISOIL17A (Homo sapiens)9068941 PIDPID:200028

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#
Reference Title
Reference Citation
1. IL-17A gene transfer induces bone loss and epidermal hyperplasia associated with psoriatic arthritis. Adamopoulos IE, etal., Ann Rheum Dis. 2014 Feb 23. doi: 10.1136/annrheumdis-2013-204782.
2. Propionibacterium acnes Induces an IL-17 Response in Acne Vulgaris that Is Regulated by Vitamin A and Vitamin D. Agak GW, etal., J Invest Dermatol. 2014 Feb;134(2):366-73. doi: 10.1038/jid.2013.334. Epub 2013 Aug 7.
3. Proteomic analysis indicates altered expression of plasma proteins in a rat nephropathy model. Ai S, etal., Clin Exp Nephrol. 2013 Feb;17(1):24-31. doi: 10.1007/s10157-012-0662-y. Epub 2012 Jul 7.
4. IL-17A levels increase in the infarcted region of the left ventricle in a rat model of myocardial infarction. Avalos AM, etal., Biol Res. 2012;45(2):193-200. doi: 10.4067/S0716-97602012000200012.
5. Interleukin-17A expression in patients presenting with nasal polyposis. Avelino MA, etal., Braz J Otorhinolaryngol. 2013 Sep-Oct;79(5):616-9. doi: 10.5935/1808-8694.20130110.
6. Anti-interleukin-17A monoclonal antibody secukinumab in treatment of ankylosing spondylitis: a randomised, double-blind, placebo-controlled trial. Baeten D, etal., Lancet. 2013 Nov 23;382(9906):1705-13. doi: 10.1016/S0140-6736(13)61134-4. Epub 2013 Sep 13.
7. IL-17/Th17 promotes type 1 T cell immunity against pulmonary intracellular bacterial infection through modulating dendritic cell function. Bai H, etal., J Immunol. 2009 Nov 1;183(9):5886-95. Epub 2009 Oct 7.
8. Interleukin-17 in sputum correlates with airway hyperresponsiveness to methacholine. Barczyk A, etal., Respir Med. 2003 Jun;97(6):726-33.
9. Enhanced IL-17 signalling following myocardial ischaemia/reperfusion injury. Barry SP, etal., Int J Cardiol. 2013 Mar 10;163(3):326-34. doi: 10.1016/j.ijcard.2011.08.849. Epub 2011 Oct 24.
10. IL-17 producing gammadelta T cells are required for a controlled inflammatory response after bleomycin-induced lung injury. Braun RK, etal., Inflammation. 2008 Jun;31(3):167-79. Epub 2008 Mar 13.
11. Raised interleukin-17 is immuno-localised to neutrophils in cystic fibrosis lung disease. Brodlie M, etal., Eur Respir J. 2010 Nov 25.
12. Active trachoma is associated with increased conjunctival expression of IL17A and profibrotic cytokines. Burton MJ, etal., Infect Immun. 2011 Dec;79(12):4977-83. doi: 10.1128/IAI.05718-11. Epub 2011 Sep 12.
13. Alteration of IL-17 related protein expressions in experimental autoimmune myocarditis and inhibition of IL-17 by IL-10-Ig fusion gene transfer. Chang H, etal., Circ J. 2008 May;72(5):813-9.
14. Anti-IL-17A therapy protects against bone erosion in experimental models of rheumatoid arthritis. Chao CC, etal., Autoimmunity. 2010 Oct 7.
15. The polymorphism of IL-17 G-152A was associated with childhood asthma and bacterial colonization of the hypopharynx in bronchiolitis. Chen J, etal., J Clin Immunol. 2010 Jul;30(4):539-45. Epub 2010 May 2.
16. Decreasing TNF-alpha results in less fibrosis and earlier resolution of granulomatous experimental autoimmune thyroiditis. Chen K, etal., J Leukoc Biol. 2007 Jan;81(1):306-14. Epub 2006 Oct 17.
17. Inhibition of IL-17A in atherosclerosis. Cheng X, etal., Atherosclerosis. 2011 Apr;215(2):471-4. doi: 10.1016/j.atherosclerosis.2010.12.034. Epub 2011 Jan 19.
18. Role of group 3 innate lymphoid cells during experimental otitis media in a rat model. Cho CG, etal., Int J Pediatr Otorhinolaryngol. 2016 Sep;88:146-52. doi: 10.1016/j.ijporl.2016.07.001. Epub 2016 Jul 6.
19. The nature of innate and adaptive interleukin-17A responses in sham or bacterial inoculation. Chong DL, etal., Immunology. 2012 Jul;136(3):325-33. doi: 10.1111/j.1365-2567.2012.03584.x.
20. Transcriptomic and Innate Immune Responses to Yersinia pestis in the Lymph Node during Bubonic Plague. Comer JE, etal., Infect Immun. 2010 Dec;78(12):5086-5098. Epub 2010 Sep 27.
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PMID:8390535   PMID:8877732   PMID:15642151   PMID:16239543   PMID:16785495   PMID:16982811   PMID:17827167   PMID:17888176   PMID:17969033   PMID:17982105   PMID:18792410   PMID:18997793  
PMID:19666510   PMID:19714651   PMID:19838199   PMID:20554964   PMID:20706986   PMID:21143599   PMID:21145111   PMID:21316418   PMID:21317395   PMID:21693307   PMID:21996014   PMID:21996044  
PMID:22152774   PMID:22355716   PMID:22851861   PMID:23034280   PMID:23147107   PMID:23285072   PMID:23334376   PMID:24026300   PMID:24548428   PMID:24914249   PMID:25231257   PMID:25331672  
PMID:25470037   PMID:25867387   PMID:25955429   PMID:26002979   PMID:26062421   PMID:26153393   PMID:26704184   PMID:27049496   PMID:27055905   PMID:27889748   PMID:27959414   PMID:27980343  
PMID:28104249   PMID:28359934   PMID:28759646   PMID:28916896   PMID:28919411   PMID:29469038   PMID:29734196   PMID:30097894   PMID:30216518   PMID:30401564   PMID:31190552   PMID:31351185  
PMID:32531822   PMID:33099553   PMID:33677419   PMID:33834668   PMID:34491653   PMID:34596585   PMID:34725639   PMID:37021908   PMID:38070418   PMID:38240234   PMID:38860366  



Il17a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8930,640,844 - 30,644,331 (+)NCBIGRCr8
mRatBN7.2923,144,402 - 23,147,889 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl923,144,402 - 23,147,889 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx931,641,574 - 31,645,060 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0936,762,293 - 36,765,779 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0935,077,566 - 35,081,052 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0926,841,299 - 26,844,786 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl926,841,299 - 26,844,786 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0925,696,865 - 25,700,352 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4919,454,979 - 19,458,467 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1919,453,469 - 19,455,797 (+)NCBI
Celera920,720,899 - 20,724,386 (+)NCBICelera
Cytogenetic Map9q13NCBI
IL17A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38652,186,375 - 52,190,638 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl652,186,375 - 52,190,638 (+)EnsemblGRCh38hg38GRCh38
GRCh37652,051,173 - 52,055,436 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36652,159,144 - 52,163,395 (+)NCBINCBI36Build 36hg18NCBI36
Build 34652,159,143 - 52,163,395NCBI
Celera653,712,308 - 53,716,559 (+)NCBICelera
Cytogenetic Map6p12.2NCBI
HuRef651,882,254 - 51,886,505 (+)NCBIHuRef
CHM1_1652,053,438 - 52,057,689 (+)NCBICHM1_1
T2T-CHM13v2.0652,025,075 - 52,029,336 (+)NCBIT2T-CHM13v2.0
Il17a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39120,801,129 - 20,804,720 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl120,801,129 - 20,804,720 (+)EnsemblGRCm39 Ensembl
GRCm38120,730,905 - 20,734,496 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl120,730,905 - 20,734,496 (+)EnsemblGRCm38mm10GRCm38
MGSCv37120,720,986 - 20,724,577 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36120,716,056 - 20,719,647 (+)NCBIMGSCv36mm8
Celera120,604,456 - 20,608,046 (+)NCBICelera
Cytogenetic Map1A4NCBI
cM Map16.45NCBI
Il17a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554115,896,702 - 5,900,962 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554115,896,435 - 5,899,911 (-)NCBIChiLan1.0ChiLan1.0
IL17A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2566,651,896 - 66,656,165 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1662,528,730 - 62,532,997 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0651,736,269 - 51,740,538 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1653,004,820 - 53,009,074 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl653,004,820 - 53,009,074 (+)Ensemblpanpan1.1panPan2
IL17A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11219,854,129 - 19,862,521 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1219,854,129 - 19,862,513 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1219,751,596 - 19,759,988 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01220,353,311 - 20,361,254 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11219,859,850 - 19,868,228 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01219,962,726 - 19,971,118 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01220,100,900 - 20,109,292 (+)NCBIUU_Cfam_GSD_1.0
Il17a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494655,335,194 - 55,338,342 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364768,621,860 - 8,625,008 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364768,621,860 - 8,625,008 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL17A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl746,013,584 - 46,017,153 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1746,013,584 - 46,017,161 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2752,463,736 - 52,467,313 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IL17A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11720,314,082 - 20,319,917 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1720,315,773 - 20,318,785 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604452,087,244 - 52,091,712 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il17a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248553,911,349 - 3,913,136 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248553,911,349 - 3,914,214 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Il17a
18 total Variants


Assembly: mRatBN7.2

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
9 23147262 23147263 T G snv European Variation Archive Release 3, European Variation Archive Release 4, European Variation Archive Release 6, RCS/LavRrrcMcwi (2021), M520/N (2020), M520/NRrrcMcwi (2019NG), M520/NRrrcMcwi (2019) View more Information


Assembly: Rnor_5.0

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
9 25699725 25699726 T G snv SBH/Ygl (MCW), MHS/Gib (KNAW), M520/N (KNAW), RCS/Kyo (KyushuU), SDLEF7/Barth (UDEL), NIG-III/Hok (KyushuU), HTX/Kyo (KyushuU), SBH/Ygl (KNAW) View more Information


Assembly: Rnor_6.0

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
9 26844159 26844160 T G snv CDS, SBH/Ygl (MCW), M520/N (MCW), M520/N (2020), SBH/Ygl (RGD), M520/NRrrcMcwi (2019), MHS/Gib (RGD) View more Information

Predicted Target Of
Summary Value
Count of predictions:52
Count of miRNA genes:43
Interacting mature miRNAs:51
Transcripts:ENSRNOT00000016664
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 22 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat

1 to 10 of 22 rows



alimentary part of gastrointestinal system
appendage
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
mesenchyme
mesoderm
reproductive system
respiratory system
2 1 6 11 1 11 1 15 11 5 10



Ensembl Acc Id: ENSRNOT00000016664   ⟹   ENSRNOP00000016664
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl923,144,402 - 23,147,889 (+)Ensembl
Rnor_6.0 Ensembl926,841,299 - 26,844,786 (+)Ensembl
RefSeq Acc Id: NM_001106897   ⟹   NP_001100367
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8930,640,844 - 30,644,331 (+)NCBI
mRatBN7.2923,144,402 - 23,147,889 (+)NCBI
Rnor_6.0926,841,299 - 26,844,786 (+)NCBI
Rnor_5.0925,696,865 - 25,700,352 (+)NCBI
RGSC_v3.4919,454,979 - 19,458,467 (+)RGD
Celera920,720,899 - 20,724,386 (+)RGD
Sequence:
Protein RefSeqs NP_001100367 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM18652 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000016664
GenBank Protein Q61453 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001100367   ⟸   NM_001106897
- Peptide Label: precursor
- UniProtKB: Q61453 (UniProtKB/Swiss-Prot),   A6JJ80 (UniProtKB/TrEMBL),   G3V7M4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000016664   ⟸   ENSRNOT00000016664

Name Modeler Protein Id AA Range Protein Structure
AF-Q61453-F1-model_v2 AlphaFold Q61453 1-150 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 16 of 16 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-28034 BioCyc
Ensembl Genes ENSRNOG00000012467 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000016664 ENTREZGENE
Gene3D-CATH 2.10.90.10 UniProtKB/Swiss-Prot
InterPro Cystine-knot_cytokine UniProtKB/Swiss-Prot
  IL-17_chr UniProtKB/Swiss-Prot
  IL-17_fam UniProtKB/Swiss-Prot
NCBI Gene Il17a ENTREZGENE
Pfam IL17 UniProtKB/Swiss-Prot
PhenoGen Il17a PhenoGen
PRINTS INTRLEUKIN17 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000012467 RatGTEx
Superfamily-SCOP SSF57501 UniProtKB/Swiss-Prot
UniProt A6JJ80 ENTREZGENE, UniProtKB/TrEMBL
  G3V7M4 ENTREZGENE, UniProtKB/TrEMBL
  IL17_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 16 of 16 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-05-26 Il17a  interleukin 17A  LOC301289  similar to Interleukin-17 precursor (IL-17) (Cytotoxic T lymphocyte-associated antigen 8) (CTLA-8)  Data merged from RGD:1587366 737654 APPROVED
2008-02-15 Il17a  interleukin 17A  Il17  interleukin 17  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC301289  similar to Interleukin-17 precursor (IL-17) (Cytotoxic T lymphocyte-associated antigen 8) (CTLA-8)      Symbol and Name status set to provisional 70820 PROVISIONAL
2002-11-06 Il17  interleukin 17    Interleukin 17 (cytotoxic T-lymphocyte-associated serine esterase 8)  Name updated 625702 APPROVED
2002-06-10 Il17  Interleukin 17 (cytotoxic T-lymphocyte-associated serine esterase 8)      Symbol and Name status set to approved 70586 APPROVED

Note Type Note Reference
gene_expression expressed in activated T cells 729041
gene_protein 150 amino acids 729041