Morc4 (MORC family CW-type zinc finger 4) - Rat Genome Database

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Gene: Morc4 (MORC family CW-type zinc finger 4) Chinchilla lanigera
Analyze
Symbol: Morc4
Name: MORC family CW-type zinc finger 4
RGD ID: 9050797
Description: ENCODES a protein that exhibits methylated histone binding (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Charcot-Marie-Tooth disease type X (ortholog); Macrocephaly (ortholog); FOUND IN nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: MORC family CW-type zinc finger protein 4
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554909,045,590 - 9,111,716 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554909,045,306 - 9,112,446 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleoplasm  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Morc4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554909,045,590 - 9,111,716 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554909,045,306 - 9,112,446 (+)NCBIChiLan1.0ChiLan1.0
MORC4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X106,940,738 - 107,000,212 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX106,813,871 - 107,000,212 (-)EnsemblGRCh38hg38GRCh38
GRCh37X106,183,968 - 106,243,442 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X106,070,620 - 106,130,098 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X105,990,113 - 106,034,618NCBI
CeleraX106,655,351 - 106,714,844 (-)NCBICelera
Cytogenetic MapXq22.3NCBI
HuRefX95,811,934 - 95,871,281 (-)NCBIHuRef
CHM1_1X106,094,770 - 106,154,304 (-)NCBICHM1_1
T2T-CHM13v2.0X105,377,254 - 105,436,736 (-)NCBIT2T-CHM13v2.0
Morc4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X138,722,384 - 138,772,440 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX138,722,381 - 138,772,426 (-)EnsemblGRCm39 Ensembl
GRCm38X139,821,635 - 139,871,692 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX139,821,632 - 139,871,677 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X136,357,385 - 136,406,047 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X135,167,999 - 135,218,018 (-)NCBIMGSCv36mm8
CeleraX123,085,534 - 123,135,372 (-)NCBICelera
Cytogenetic MapXF1NCBI
cM MapX61.35NCBI
Morc4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X108,269,197 - 108,317,611 (-)NCBIGRCr8
mRatBN7.2X103,477,366 - 103,529,026 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX103,480,603 - 103,528,956 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0X111,143,537 - 111,191,993 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX111,142,602 - 111,191,936 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0353,403,152 - 53,454,821 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X127,559,355 - 127,607,731 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera344,398,586 - 44,447,138 (+)NCBICelera
Cytogenetic MapXq32NCBI
MORC4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X106,424,227 - 106,483,817 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X106,427,828 - 106,487,448 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X96,040,992 - 96,100,570 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X106,418,348 - 106,470,758 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX106,418,348 - 106,472,561 (-)Ensemblpanpan1.1panPan2
MORC4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X80,497,473 - 80,550,625 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX80,497,504 - 80,551,569 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX66,616,564 - 66,669,726 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X82,140,864 - 82,194,102 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX82,140,895 - 82,194,095 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X79,605,771 - 79,658,931 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X81,315,640 - 81,368,605 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X81,094,634 - 81,147,807 (-)NCBIUU_Cfam_GSD_1.0
Morc4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X79,846,743 - 79,902,577 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364997,755,368 - 7,811,282 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364997,755,405 - 7,811,718 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MORC4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX87,369,319 - 87,427,253 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X87,369,311 - 87,427,296 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X101,815,542 - 101,816,412 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MORC4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X94,773,194 - 94,833,949 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX94,774,205 - 94,833,647 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606519,857,817 - 19,918,580 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Morc4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248039,760,407 - 9,818,738 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248039,760,440 - 9,867,349 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000003487   ⟹   ENSCLAP00000003417
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554909,045,590 - 9,111,716 (+)Ensembl
RefSeq Acc Id: XM_013504554   ⟹   XP_013360008
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554909,045,306 - 9,112,446 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013360008 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000003417
  ENSCLAP00000003417.1
Reference Protein Sequences
RefSeq Acc Id: XP_013360008   ⟸   XM_013504554
- UniProtKB: A0A8C2UPX4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000003417   ⟸   ENSCLAT00000003487
Protein Domains
CW-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000002445 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000003487 ENTREZGENE
  ENSCLAT00000003487.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.100 UniProtKB/TrEMBL
  3.30.565.10 UniProtKB/TrEMBL
InterPro HATPase_C_sf UniProtKB/TrEMBL
  MORC_ATPase UniProtKB/TrEMBL
  Morc_S5 UniProtKB/TrEMBL
  Znf_CW UniProtKB/TrEMBL
NCBI Gene Morc4 ENTREZGENE
PANTHER MORC FAMILY CW-TYPE ZINC FINGER PROTEIN 4 UniProtKB/TrEMBL
  PTHR23336 UniProtKB/TrEMBL
Pfam HATPase_c_3 UniProtKB/TrEMBL
  Morc6_S5 UniProtKB/TrEMBL
  zf-CW UniProtKB/TrEMBL
PROSITE ZF_CW UniProtKB/TrEMBL
Superfamily-SCOP SSF55874 UniProtKB/TrEMBL
UniProt A0A8C2UPX4 ENTREZGENE, UniProtKB/TrEMBL