Morc4 (MORC family CW-type zinc finger 4) - Rat Genome Database

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Gene: Morc4 (MORC family CW-type zinc finger 4) Heterocephalus glaber
Analyze
Symbol: Morc4
Name: MORC family CW-type zinc finger 4
RGD ID: 18912096
Description: ENCODES a protein that exhibits ATP hydrolysis activity (inferred); metal ion binding (inferred); methylated histone binding (inferred); ASSOCIATED WITH autistic disorder (ortholog); Charcot-Marie-Tooth disease type X (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: MORC family CW-type zinc finger protein 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248039,760,407 - 9,818,738 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248039,760,440 - 9,867,349 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleoplasm  (IEA)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Morc4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248039,760,407 - 9,818,738 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248039,760,440 - 9,867,349 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MORC4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X106,940,738 - 107,000,212 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX106,813,871 - 107,000,212 (-)EnsemblGRCh38hg38GRCh38
GRCh37X106,183,968 - 106,243,442 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X106,070,620 - 106,130,098 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X105,990,113 - 106,034,618NCBI
CeleraX106,655,351 - 106,714,844 (-)NCBICelera
Cytogenetic MapXq22.3NCBI
HuRefX95,811,934 - 95,871,281 (-)NCBIHuRef
CHM1_1X106,094,770 - 106,154,304 (-)NCBICHM1_1
T2T-CHM13v2.0X105,377,254 - 105,436,736 (-)NCBIT2T-CHM13v2.0
Morc4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X138,722,384 - 138,772,440 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX138,722,381 - 138,772,426 (-)EnsemblGRCm39 Ensembl
GRCm38X139,821,635 - 139,871,692 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX139,821,632 - 139,871,677 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X136,357,385 - 136,406,047 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X135,167,999 - 135,218,018 (-)NCBIMGSCv36mm8
CeleraX123,085,534 - 123,135,372 (-)NCBICelera
Cytogenetic MapXF1NCBI
cM MapX61.35NCBI
Morc4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X108,269,197 - 108,317,611 (-)NCBIGRCr8
mRatBN7.2X103,477,366 - 103,529,026 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX103,480,603 - 103,528,956 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0X111,143,537 - 111,191,993 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX111,142,602 - 111,191,936 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0353,403,152 - 53,454,821 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X127,559,355 - 127,607,731 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera344,398,586 - 44,447,138 (+)NCBICelera
Cytogenetic MapXq32NCBI
Morc4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554909,045,590 - 9,111,716 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554909,045,306 - 9,112,446 (+)NCBIChiLan1.0ChiLan1.0
MORC4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X106,424,227 - 106,483,817 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X106,427,828 - 106,487,448 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X96,040,992 - 96,100,570 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X106,418,348 - 106,470,758 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX106,418,348 - 106,472,561 (-)Ensemblpanpan1.1panPan2
MORC4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X80,497,473 - 80,550,625 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX80,497,504 - 80,551,569 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX66,616,564 - 66,669,726 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X82,140,864 - 82,194,102 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX82,140,895 - 82,194,095 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X79,605,771 - 79,658,931 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X81,315,640 - 81,368,605 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X81,094,634 - 81,147,807 (-)NCBIUU_Cfam_GSD_1.0
Morc4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X79,846,743 - 79,902,577 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364997,755,368 - 7,811,282 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364997,755,405 - 7,811,718 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MORC4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX87,369,319 - 87,427,253 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X87,369,311 - 87,427,296 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X101,815,542 - 101,816,412 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MORC4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X94,773,194 - 94,833,949 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX94,774,205 - 94,833,647 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606519,857,817 - 19,918,580 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013078338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021241565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021241566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021241567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021241568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021241569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021241570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021241571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021241573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021241574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021241575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002388296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002388297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01072197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01072198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GEBF01005614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000004335   ⟹   ENSHGLP00000004275
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248039,760,407 - 9,818,738 (+)Ensembl
RefSeq Acc Id: XM_013078338   ⟹   XP_012933792
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,821,576 (+)NCBI
RefSeq Acc Id: XM_021241565   ⟹   XP_021097224
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,867,349 (+)NCBI
RefSeq Acc Id: XM_021241566   ⟹   XP_021097225
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,867,349 (+)NCBI
RefSeq Acc Id: XM_021241567   ⟹   XP_021097226
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,867,349 (+)NCBI
RefSeq Acc Id: XM_021241568   ⟹   XP_021097227
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,867,349 (+)NCBI
RefSeq Acc Id: XM_021241569   ⟹   XP_021097228
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,867,349 (+)NCBI
RefSeq Acc Id: XM_021241570   ⟹   XP_021097229
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,821,576 (+)NCBI
RefSeq Acc Id: XM_021241571   ⟹   XP_021097230
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,821,576 (+)NCBI
RefSeq Acc Id: XM_021241573   ⟹   XP_021097232
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,861,667 (+)NCBI
RefSeq Acc Id: XM_021241574   ⟹   XP_021097233
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,976 - 9,867,349 (+)NCBI
RefSeq Acc Id: XM_021241575   ⟹   XP_021097234
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,821,576 (+)NCBI
RefSeq Acc Id: XR_002388296
Type: NON-CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,861,585 (+)NCBI
RefSeq Acc Id: XR_002388297
Type: NON-CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248039,760,440 - 9,852,740 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_021097224   ⟸   XM_021241565
- Peptide Label: isoform X1
- UniProtKB: G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021097228   ⟸   XM_021241569
- Peptide Label: isoform X5
- UniProtKB: G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021097226   ⟸   XM_021241567
- Peptide Label: isoform X3
- UniProtKB: G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021097225   ⟸   XM_021241566
- Peptide Label: isoform X2
- UniProtKB: G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021097227   ⟸   XM_021241568
- Peptide Label: isoform X4
- UniProtKB: G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021097232   ⟸   XM_021241573
- Peptide Label: isoform X8
- UniProtKB: G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012933792   ⟸   XM_013078338
- Peptide Label: isoform X6
- UniProtKB: G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021097230   ⟸   XM_021241571
- Peptide Label: isoform X8
- UniProtKB: G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021097229   ⟸   XM_021241570
- Peptide Label: isoform X7
- UniProtKB: A0A0P6J3N5 (UniProtKB/TrEMBL),   G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021097234   ⟸   XM_021241575
- Peptide Label: isoform X10
- UniProtKB: G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021097233   ⟸   XM_021241574
- Peptide Label: isoform X9
- UniProtKB: G5C3Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000004275   ⟸   ENSHGLT00000004335


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000003128 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000004335 ENTREZGENE
Gene3D-CATH 3.30.40.100 UniProtKB/TrEMBL
  3.30.565.10 UniProtKB/TrEMBL
InterPro HATPase_C_sf UniProtKB/TrEMBL
  MORC_ATPase UniProtKB/TrEMBL
  Morc_S5 UniProtKB/TrEMBL
  Znf_CW UniProtKB/TrEMBL
NCBI Gene Morc4 ENTREZGENE
PANTHER MORC FAMILY CW-TYPE ZINC FINGER PROTEIN 4 UniProtKB/TrEMBL
  PTHR23336 UniProtKB/TrEMBL
Pfam HATPase_c_3 UniProtKB/TrEMBL
  Morc6_S5 UniProtKB/TrEMBL
  zf-CW UniProtKB/TrEMBL
PROSITE ZF_CW UniProtKB/TrEMBL
Superfamily-SCOP SSF55874 UniProtKB/TrEMBL
UniProt A0A0P6J3N5 ENTREZGENE, UniProtKB/TrEMBL
  G5C3Z3 ENTREZGENE, UniProtKB/TrEMBL