Morc1 (MORC family CW-type zinc finger 1) - Rat Genome Database

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Gene: Morc1 (MORC family CW-type zinc finger 1) Chinchilla lanigera
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Symbol: Morc1
Name: MORC family CW-type zinc finger 1
RGD ID: 9028959
Description: INVOLVED IN behavioral fear response (ortholog); epigenetic programing of male pronucleus (ortholog); epigenetic regulation of gene expression (ortholog); ASSOCIATED WITH megacolon (ortholog); melancholic depression (ortholog); FOUND IN male germ cell nucleus (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: MORC family CW-type zinc finger protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554279,789,971 - 9,968,613 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554279,790,069 - 9,974,140 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Morc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554279,789,971 - 9,968,613 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554279,790,069 - 9,974,140 (-)NCBIChiLan1.0ChiLan1.0
MORC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383108,958,248 - 109,118,134 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3108,958,248 - 109,118,134 (-)EnsemblGRCh38hg38GRCh38
GRCh373108,677,095 - 108,836,981 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363110,159,776 - 110,319,658 (-)NCBINCBI36Build 36hg18NCBI36
Build 343110,159,780 - 110,319,658NCBI
Celera3107,074,840 - 107,234,730 (-)NCBICelera
Cytogenetic Map3q13.13NCBI
HuRef3106,050,639 - 106,210,559 (-)NCBIHuRef
CHM1_13108,640,979 - 108,801,142 (-)NCBICHM1_1
T2T-CHM13v2.03111,678,481 - 111,838,414 (-)NCBIT2T-CHM13v2.0
Morc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391648,251,600 - 48,451,268 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1648,251,600 - 48,451,263 (+)EnsemblGRCm39 Ensembl
GRCm381648,431,237 - 48,630,905 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1648,431,237 - 48,630,900 (+)EnsemblGRCm38mm10GRCm38
MGSCv371648,431,350 - 48,631,018 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361648,350,863 - 48,550,531 (+)NCBIMGSCv36mm8
Celera1648,791,593 - 48,991,779 (+)NCBICelera
Cytogenetic Map16B5NCBI
cM Map1630.75NCBI
Morc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81165,641,786 - 65,847,257 (-)NCBIGRCr8
mRatBN7.21152,178,769 - 52,384,255 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1152,178,769 - 52,384,255 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1160,941,928 - 61,147,394 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01153,603,718 - 53,809,200 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01152,716,585 - 52,938,563 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01154,762,654 - 55,044,581 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1154,762,654 - 55,044,581 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01157,921,428 - 58,071,702 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01158,179,362 - 58,208,671 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41153,424,929 - 53,653,313 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1151,776,017 - 51,985,152 (-)NCBICelera
Cytogenetic Map11q21NCBI
MORC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22106,943,518 - 107,103,368 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13106,948,297 - 107,108,147 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03106,091,990 - 106,251,790 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13113,021,874 - 113,180,165 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3113,021,874 - 113,180,331 (-)Ensemblpanpan1.1panPan2
MORC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13314,120,370 - 14,302,995 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3314,147,504 - 14,291,024 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3314,225,798 - 14,407,372 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03314,286,395 - 14,470,720 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3314,309,957 - 14,454,632 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13314,155,473 - 14,339,454 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03314,222,690 - 14,406,239 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03314,634,171 - 14,816,395 (-)NCBIUU_Cfam_GSD_1.0
Morc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602140,135,935 - 140,285,971 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366452,560,397 - 2,707,661 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366452,570,071 - 2,725,796 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MORC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13150,268,234 - 150,560,867 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113150,387,942 - 150,561,808 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213159,468,092 - 159,609,868 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MORC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12271,664,183 - 71,828,879 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604194,631,843 - 94,793,589 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Morc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473139,984,649 - 40,191,042 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473140,014,713 - 40,191,395 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000016563   ⟹   ENSCLAP00000016399
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554279,789,971 - 9,968,613 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000016564   ⟹   ENSCLAP00000016400
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554279,789,971 - 9,960,309 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000016565   ⟹   ENSCLAP00000016401
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554279,789,971 - 9,955,347 (-)Ensembl
RefSeq Acc Id: XM_013515033   ⟹   XP_013370487
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554279,790,069 - 9,968,236 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013515034   ⟹   XP_013370488
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554279,790,069 - 9,968,236 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013515035   ⟹   XP_013370489
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554279,790,069 - 9,974,140 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013515036   ⟹   XP_013370490
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554279,790,069 - 9,955,261 (-)NCBI
Sequence:
RefSeq Acc Id: XP_013370489   ⟸   XM_013515035
- Peptide Label: isoform X3
- UniProtKB: A0A8C2VN68 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013370488   ⟸   XM_013515034
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013370487   ⟸   XM_013515033
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VL74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013370490   ⟸   XM_013515036
- Peptide Label: isoform X3
- UniProtKB: A0A8C2VN68 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000016399   ⟸   ENSCLAT00000016563
RefSeq Acc Id: ENSCLAP00000016401   ⟸   ENSCLAT00000016565
RefSeq Acc Id: ENSCLAP00000016400   ⟸   ENSCLAT00000016564
Protein Domains
CW-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000011276 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000016563 ENTREZGENE
  ENSCLAT00000016563.1 UniProtKB/TrEMBL
  ENSCLAT00000016564 ENTREZGENE
  ENSCLAT00000016564.1 UniProtKB/TrEMBL
  ENSCLAT00000016565 ENTREZGENE
  ENSCLAT00000016565.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.100 UniProtKB/TrEMBL
  3.30.565.10 UniProtKB/TrEMBL
InterPro HATPase_C_sf UniProtKB/TrEMBL
  Morc_S5 UniProtKB/TrEMBL
  Znf_CW UniProtKB/TrEMBL
NCBI Gene Morc1 ENTREZGENE
PANTHER MORC FAMILY CW-TYPE ZINC FINGER PROTEIN 1 UniProtKB/TrEMBL
  ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 1 UniProtKB/TrEMBL
Pfam HATPase_c_3 UniProtKB/TrEMBL
  Morc6_S5 UniProtKB/TrEMBL
  zf-CW UniProtKB/TrEMBL
PROSITE ZF_CW UniProtKB/TrEMBL
Superfamily-SCOP SSF55874 UniProtKB/TrEMBL
UniProt A0A8C2VL74 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2VN68 ENTREZGENE, UniProtKB/TrEMBL