Arpp19 (cAMP regulated phosphoprotein 19)

Gene: Arpp19 (cAMP regulated phosphoprotein 19) Chinchilla lanigera

Analyze

Symbol:

Arpp19

Name:

cAMP regulated phosphoprotein 19

RGD ID:

8962153

Description:

ENCODES a protein that exhibits potassium channel regulator activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN dopamine receptor signaling pathway (ortholog); G2/M transition of mitotic cell cycle (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); genetic disease (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

cAMP-regulated phosphoprotein 19; cAMP-regulated phosphoprotein, 19kDa

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	2,354,988 - 2,369,846 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955409	2,354,988 - 2,369,846 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

genetic disease (ISO)

paraplegia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

dopamine receptor signaling pathway (ISO)

G2/M transition of mitotic cell cycle (ISO)

mitotic cell cycle (ISO)

positive regulation of gluconeogenesis (ISO)

positive regulation of Ras protein signal transduction (ISO)

Molecular Function

potassium channel regulator activity (ISO)

protein binding (ISO)

signaling receptor binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Arpp19
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	2,354,988 - 2,369,846 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955409	2,354,988 - 2,369,846 (+)	NCBI	ChiLan1.0	ChiLan1.0

ARPP19
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	52,547,045 - 52,569,446 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	52,547,045 - 52,569,883 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	52,839,242 - 52,861,643 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	50,626,724 - 50,648,505 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	29,734,478 - 29,756,262 (-)	NCBI		Celera
Cytogenetic Map	15	q21.2	NCBI
HuRef	15	29,670,423 - 29,691,905 (-)	NCBI		HuRef
CHM1_1	15	52,957,377 - 52,979,161 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	50,355,343 - 50,377,746 (-)	NCBI		T2T-CHM13v2.0

Arpp19
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	74,944,896 - 74,967,595 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	74,944,896 - 74,967,595 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	75,037,614 - 75,060,313 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	75,037,614 - 75,060,313 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	74,885,421 - 74,908,120 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	74,824,337 - 74,846,918 (+)	NCBI		MGSCv36	mm8
Celera	9	72,191,852 - 72,214,220 (+)	NCBI		Celera
Cytogenetic Map	9	D	NCBI
cM Map	9	42.25	NCBI

Arpp19
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	84,660,166 - 84,683,012 (+)	NCBI		GRCr8
mRatBN7.2	8	75,779,640 - 75,802,474 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	110,813,545 - 110,814,012 (-)	Ensembl		mRatBN7.2 Ensembl
mRatBN7.2 Ensembl	8	75,779,523 - 75,802,452 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	81,286,292 - 81,309,040 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	79,551,923 - 79,574,709 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	77,385,620 - 77,408,368 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	81,949,577 - 81,972,054 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	81,949,877 - 81,968,589 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	81,566,027 - 81,588,675 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	79,824,737 - 79,846,702 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	79,843,790 - 79,865,756 (+)	NCBI
Celera	8	75,572,284 - 75,591,379 (+)	NCBI		Celera
Cytogenetic Map	8	q24	NCBI

ARPP19
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	41,783,713 - 41,814,106 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	45,964,075 - 45,994,440 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	31,488,156 - 31,510,404 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	49,813,313 - 49,835,051 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	49,813,447 - 49,835,051 (-)	Ensembl	panpan1.1		panPan2

ARPP19
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	18,190,358 - 18,213,054 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	18,118,585 - 18,141,456 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	18,338,280 - 18,361,704 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	18,338,286 - 18,361,665 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	18,256,897 - 18,280,056 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	18,374,907 - 18,398,057 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	18,480,413 - 18,503,568 (-)	NCBI		UU_Cfam_GSD_1.0

Arpp19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	96,486,786 - 96,505,080 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936471	14,334,667 - 14,353,131 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARPP19
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	119,134,851 - 119,157,352 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	119,134,318 - 119,157,169 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	132,202,587 - 132,221,849 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ARPP19
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	30,825,846 - 30,844,005 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	30,826,359 - 30,843,251 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	110,384,413 - 110,404,565 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Arpp19
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	8,081,894 - 8,103,429 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624731	8,081,940 - 8,103,429 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005376632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01009197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01002871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000010278 ⟹ ENSCLAP00000010148

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955409	2,354,988 - 2,369,846 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000010279 ⟹ ENSCLAP00000010149

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955409	2,355,138 - 2,368,304 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000010280 ⟹ ENSCLAP00000010150

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955409	2,355,268 - 2,368,304 (+)	Ensembl

RefSeq Acc Id:

XM_005376632 ⟹ XP_005376689

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955409	2,354,988 - 2,369,846 (+)	NCBI

Sequence:

show sequence

GATGTGAAGGAGCCTCTAGGCGGAAATGAGGCTGTCCCGGGCGGATGTGAGGCGAGCGCGCGCC
GCGACCTTTGAAGGGAAGAGGAAGTGTTCGGCGTCTCGCGGCCCGAGGAAGGGTTGGCGAGGTG
GGGGCGCGGCCGGGACCGCCGGGTCGCAGGGTCGCAGGGCCTGGAGTCACAGGCAGTGGCCACT
TCCGAGGCGGCGGCCGGGCGCGGGGAGGGGTCGGCGACGGCCCCCGTCATCTCGACTCCTCTGG
CGACTCACCCGCAGAGGGAGCACGATGTCCGCCGAGGTTCCGGAGGCGGCGTCCGCCGAGGAGC
AGAAGGAAATGGAAGATAAAGTGACCAGTCCAGAGAAAGCGGAAGAAGCAAAACTAAAAGCAAG
ATATCCTCACCTGGGACAGAAGCCTGGAGGTTCTGATTTTCTAAGGAAACGATTGCAGAAAGGG
CAAAAATATTTTGATTCTGGGGATTACAACATGGCTAAGGCAAAGATGAAGAACAAGCAACTGC
CTACTGCAACCCCGGATAAGACCGAGGTCACTGGTGACCACATTCCCACTCCACAGGACCTTCC
TCAGCGGAAACCATCCCTTGTCACAAGCAAGCTGGCTGGCTGATTAAAAGAGCTAAACTGCATG
GATCTTCTAATTCCCTTTGTTCCTCCTTATCTGTTACTTACCCACTTTATACTTTCTTTCATTC
ACTAAGTCATTTGAAACTGACAGCTTTGGAGGTAGCGGTAGGGCATAGACTGTGTAGAAGTTCT
GAGTAGTTTACCAGTGCACTGACCAGGAGGACACATTGAGCAACACAAGTCATCTACTTGAAAA
TGGCTGTACATATCACCTAACCCCTAGTGTAGAGCTGGTTCCAACAAGTAACAAGCAAGTTCTA
CAAGTCTGTTTTTGCTTCTCCTTCCTTCACCTTAGTGCTAGCTTGTATGTAAGTTCCATTTAAC
ATAACCTGTATTGTATGATTTCTTCTGAATTTTCCTTTTGGATTTTGTAAAACAAGTTTAAGAT
TACAGGTTAGAAGAAAGGTCACATAATCAAACACGAAGAGGTGGGAACCCTGTAAGATTGGCGT
GAACTTGAATGGCCTCAAACCTGTTTCAGCTTTACCAATGGCATTTCACTTGGGCAATATTTGC
CCTTCCGGTGTGACTTCTGTGACTTCAGTGCTTACCAGCTGCCACTGAAGCCCGCATTCTTCTC
AGTTCTGTAGCGTCGGAACACTTTCCTTGTAAGATGTGAATGAAGTATGCATGTGCATCGACTG
TTGAATTCACTTTTGTGCCATTTTTGTAAATATAATAGTTTTGCACAACCTTTCACAAATGTCT
GCATTAATTTCACCTATGAGAAAGTATATAATGTGCCAACCTGAAGCACAAAAGTTCCTACACA
AAACTCTGTCATTACAACTTTTGTGTAATAAGAGCAGTTTGCAAGCTTGGGTTTATAGAATACC
AAGTGGAAGTCTTTGCTCAGTCTGCTATAGAATTAAGCTTCATTTGTTCCTCACATCTGTTACA
TTCAGTGGCCTTGTGCAGATACGATATGTGGCTTAGGCATATCTTTGTCCTATGCAGAACATTT
CCTTTTGACTTTTATGAAAGTTGTAATTCATATGATTTACATAAATTTTTAAAATGTAGCTACT
TTTTACTTCCATACCTCCTTTGGGGACACAACATAAAAGGCTTTCATACTCTGCCCTGCATCCC
TGCCCCACCCTGGCTTTTTCCTTTTTTCTCTGCTTCTCTGACTCACGGTATTGGCTGTTGAGTA
CATCTGAAAGCACCAGTGTCTCTATTCTTACTCTCTAAACTTGCTGTGCTAAACACTGTTTTGT
AACACAATAATAGTCTTTTCCTTCTAATTTCTCAGTTGTTAATTGATCACTCAATCCTGTGTTA
TTTACTAACATTTGACAGTAGTTTAAATAAATGGAACTTTATAGTGAAACAGACATGAGAAGAC
TGGCCCAGGGATCTTTGTCAGGATGAACTGGATTCTGGTAAATGATTTGAAGGACTTATGATGA
GCTTAGAGGAATGTGACAATTAGAGCAACTCACATGATAGGGAAAACTTGTATTAAAAGTATCC
AGATGTTAGTGTTACAGGTGCCACTTTAATAAATATCAATTTCATTTTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005376689	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000010148.1
	ENSCLAP00000010149.1
	ENSCLAP00000010150.1

RefSeq Acc Id:	XP_005376689 ⟸ XM_005376632
- Sequence:	show sequence MRLSRADVRRARAATFEGKRKCSASRGPRKGWRGGGAAGTAGSQGRRAWSHRQWPLPRRRPGAG RGRRRPPSSRLLWRLTRRGSTMSAEVPEAASAEEQKEMEDKVTSPEKAEEAKLKARYPHLGQKP GGSDFLRKRLQKGQKYFDSGDYNMAKAKMKNKQLPTATPDKTEVTGDHIPTPQDLPQRKPSLVT SKLAG hide sequence

RefSeq Acc Id:

ENSCLAP00000010150 ⟸ ENSCLAT00000010280

RefSeq Acc Id:

ENSCLAP00000010148 ⟸ ENSCLAT00000010278

RefSeq Acc Id:

ENSCLAP00000010149 ⟸ ENSCLAT00000010279

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000007027	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000010278.1	UniProtKB/TrEMBL
	ENSCLAT00000010279.1	UniProtKB/TrEMBL
	ENSCLAT00000010280.1	UniProtKB/TrEMBL
InterPro	Endosulphine	UniProtKB/TrEMBL
NCBI Gene	Arpp19	ENTREZGENE
PANTHER	CAMP-REGULATED PHOSPHOPROTEIN 19	UniProtKB/TrEMBL
	PTHR10358	UniProtKB/TrEMBL
Pfam	Endosulfine	UniProtKB/TrEMBL
UniProt	A0A8C2V4G3_CHILA	UniProtKB/TrEMBL
	A0A8C2V4I5_CHILA	UniProtKB/TrEMBL
	A0A8C2V9I0_CHILA	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Arpp19	cAMP regulated phosphoprotein 19		cAMP-regulated phosphoprotein, 19kDa	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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