Decr2 (2,4-dienoyl-CoA reductase 2) - Rat Genome Database

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Gene: Decr2 (2,4-dienoyl-CoA reductase 2) Chinchilla lanigera
Analyze
Symbol: Decr2
Name: 2,4-dienoyl-CoA reductase 2
RGD ID: 8807101
Description: ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); trans-2-enoyl-CoA reductase (NADPH) activity (ortholog); INVOLVED IN unsaturated fatty acid biosynthetic process (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); idiopathic generalized epilepsy (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 2,4-dienoyl CoA reductase 2, peroxisomal; 2,4-dienoyl-CoA reductase 2, peroxisomal; peroxisomal 2,4-dienoyl-CoA reductase
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544216,797,190 - 16,807,199 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544216,799,927 - 16,807,199 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Decr2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544216,797,190 - 16,807,199 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544216,799,927 - 16,807,199 (-)NCBIChiLan1.0ChiLan1.0
DECR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3816401,885 - 412,482 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl16401,858 - 412,487 (+)EnsemblGRCh38hg38GRCh38
GRCh3716451,885 - 462,482 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3616391,859 - 402,488 (+)NCBINCBI36Build 36hg18NCBI36
Build 3416391,858 - 402,487NCBI
Celera16652,405 - 662,884 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef16370,920 - 381,537 (+)NCBIHuRef
CHM1_116451,798 - 462,431 (+)NCBICHM1_1
T2T-CHM13v2.016398,130 - 408,668 (+)NCBIT2T-CHM13v2.0
Decr2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391726,300,182 - 26,309,096 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1726,300,182 - 26,309,311 (-)EnsemblGRCm39 Ensembl
GRCm381726,081,208 - 26,090,322 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1726,081,208 - 26,090,337 (-)EnsemblGRCm38mm10GRCm38
MGSCv371726,218,156 - 26,227,109 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361725,808,811 - 25,817,764 (-)NCBIMGSCv36mm8
Celera1726,615,219 - 26,624,120 (-)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1713.06NCBI
Decr2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81015,609,389 - 15,617,779 (-)NCBIGRCr8
mRatBN7.21015,104,907 - 15,113,281 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1015,002,926 - 15,118,479 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1019,844,315 - 19,852,298 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01019,333,200 - 19,341,185 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01014,832,983 - 14,841,013 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01015,451,850 - 15,460,227 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1015,431,638 - 15,465,413 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01015,265,550 - 15,273,903 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41015,350,593 - 15,358,640 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11015,351,563 - 15,359,609 (-)NCBI
Celera1014,773,344 - 14,781,377 (-)NCBICelera
Cytogenetic Map10q12NCBI
DECR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v218631,096 - 642,162 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1164,420,568 - 4,430,821 (+)NCBINHGRI_mPanPan1
PanPan1.116395,041 - 406,832 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl16395,158 - 405,928 (+)Ensemblpanpan1.1panPan2
DECR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1640,108,878 - 40,118,760 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl640,111,215 - 40,115,726 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha641,371,650 - 41,381,329 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0640,450,318 - 40,460,010 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl640,450,920 - 40,460,105 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1640,138,713 - 40,148,393 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0640,098,911 - 40,108,594 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0640,578,136 - 40,587,824 (-)NCBIUU_Cfam_GSD_1.0
Decr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344112,444,262 - 112,454,980 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936501547,063 - 552,914 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936501542,365 - 553,541 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DECR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl341,295,648 - 41,304,032 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1341,291,038 - 41,304,044 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2341,124,047 - 41,137,274 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DECR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.15342,006 - 357,369 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl5342,038 - 357,392 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606830,819,836 - 30,830,433 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Decr2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249131,238,173 - 1,244,374 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249131,237,797 - 1,246,723 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000021357   ⟹   ENSCLAP00000021156
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544216,797,190 - 16,807,199 (-)Ensembl
RefSeq Acc Id: XM_005391647   ⟹   XP_005391704
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544216,800,093 - 16,807,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005391648   ⟹   XP_005391705
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544216,799,927 - 16,807,199 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005391704 (Get FASTA)   NCBI Sequence Viewer  
  XP_005391705 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000021156
  ENSCLAP00000021156.1
Reference Protein Sequences
RefSeq Acc Id: XP_005391705   ⟸   XM_005391648
- UniProtKB: A0A8C2VXZ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005391704   ⟸   XM_005391647
- UniProtKB: A0A8C2VXZ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000021156   ⟸   ENSCLAT00000021357


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000014489 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000021357 ENTREZGENE
  ENSCLAT00000021357.1 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro DECR2-like UniProtKB/TrEMBL
  NAD(P)-bd_dom_sf UniProtKB/TrEMBL
  SDR_fam UniProtKB/TrEMBL
NCBI Gene Decr2 ENTREZGENE
PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE [(3E)-ENOYL-COA-PRODUCING] UniProtKB/TrEMBL
  PTHR43296 UniProtKB/TrEMBL
Pfam adh_short_C2 UniProtKB/TrEMBL
PRINTS GDHRDH UniProtKB/TrEMBL
Superfamily-SCOP SSF51735 UniProtKB/TrEMBL
UniProt A0A8C2VXZ6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-12-13 Decr2  2,4-dienoyl-CoA reductase 2    2,4-dienoyl-CoA reductase 2, peroxisomal  Symbol and/or name change 5135510 APPROVED
2016-08-16 Decr2  2,4-dienoyl-CoA reductase 2, peroxisomal    2,4-dienoyl CoA reductase 2, peroxisomal  Symbol and/or name change 5135510 APPROVED