Gene: Trhde (thyrotropin releasing hormone degrading enzyme) Chinchilla lanigera |
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Analyze |
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Symbol: |
Trhde |
Name: |
thyrotropin releasing hormone degrading enzyme |
RGD ID: |
8735671 |
Description: |
ASSOCIATED WITH long QT syndrome (ortholog) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
thyrotropin-releasing hormone degrading enzyme; thyrotropin-releasing hormone-degrading ectoenzyme |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955405 | 12,229,448 - 12,623,675 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955405 | 12,229,448 - 12,624,753 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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Imported Disease Annotations - ClinVar
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References
Additional References at PubMed
Genomics
Comparative Map Data
Trhde (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955405 | 12,229,448 - 12,623,675 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955405 | 12,229,448 - 12,624,753 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TRHDE (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 72,087,266 - 72,670,758 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 72,087,266 - 72,670,758 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 72,666,150 - 73,064,538 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 70,952,730 - 71,345,689 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 70,952,729 - 71,345,688 | NCBI | | | | | Celera | 12 | 72,329,850 - 72,723,987 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | q21.1 | NCBI | | | | | HuRef | 12 | 69,714,852 - 70,107,634 (+) | NCBI | | HuRef | | | CHM1_1 | 12 | 72,632,089 - 73,024,946 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 72,063,195 - 72,646,521 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Trhde (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 10 | 114,234,725 - 114,638,207 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 114,234,726 - 114,638,212 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 114,398,820 - 114,802,302 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 114,398,821 - 114,802,307 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 114,398,823 - 114,802,307 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 113,835,877 - 114,238,426 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 113,803,133 - 114,205,474 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 116,334,960 - 116,737,119 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | D2 | NCBI | | | | | cM Map | 10 | 61.59 | NCBI | | | | |
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Trhde (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 51,829,473 - 52,236,843 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 49,943,271 - 50,350,613 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 49,945,766 - 50,367,371 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 51,852,771 - 52,257,524 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 54,055,893 - 54,460,654 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 53,833,748 - 54,238,531 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 57,253,023 - 57,679,795 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 57,253,023 - 57,679,795 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 57,265,684 - 57,693,174 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 53,591,770 - 54,021,219 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 53,612,156 - 54,024,183 (-) | NCBI | | | | | Celera | 7 | 46,740,631 - 47,161,218 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q22 | NCBI | | | | |
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TRHDE (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 80,300,714 - 80,696,949 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 80,297,114 - 80,693,349 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 69,795,208 - 70,191,298 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 72,652,776 - 73,047,182 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 72,652,958 - 73,073,418 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TRHDE (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 10 | 13,744,907 - 14,118,023 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 10 | 13,744,591 - 14,115,437 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 10 | 13,685,019 - 14,055,891 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 10 | 13,883,046 - 14,254,797 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 10 | 13,883,046 - 14,249,827 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 10 | 13,743,941 - 14,115,272 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 10 | 13,995,000 - 14,365,815 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 10 | 14,116,319 - 14,488,005 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Trhde (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404945 | 44,067,297 - 44,437,562 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936568 | 1,290,774 - 1,662,542 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936568 | 1,290,758 - 1,660,520 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TRHDE (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 5 | 36,274,165 - 36,658,701 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 36,266,883 - 36,663,208 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 39,289,649 - 39,520,695 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TRHDE (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 67,912,122 - 68,313,509 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 67,912,138 - 68,315,962 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 177,295,134 - 177,727,707 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Trhde (Heterocephalus glaber - naked mole-rat) |
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Expression
Sequence
RefSeq Acc Id: |
ENSCLAT00000008467 ⟹ ENSCLAP00000008340 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
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ChiLan1.0 Ensembl | NW_004955405 | 12,229,448 - 12,623,675 (+) | Ensembl |
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RefSeq Acc Id: |
XM_005374325 ⟹ XP_005374382 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
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ChiLan1.0 | NW_004955405 | 12,229,448 - 12,624,753 (+) | NCBI |
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Sequence: |
GGGGGGCCCGCCCGCGGGGGGTGCCGGAGGGGGCGGGGGAAGAGGAGGAGGCGGCGTGATGGCC CTGGACGGCGAGCGGGGGGAGCGGGAGGAGGAGAAGATAAAGAAGAAGAAGAAAAAGAAGAGGA AGAAGAAGAAGGAGGAGGAGGAGGAGGGGGCCCGGACGAGCGGCTCACCCTTCGCGGCCACCAT GGGCGAGGACGCCTCGGCGCTCCGGGCCGGCGGCGGGGGCCTCTCGGACCCGTGGGCGGACTCG GTGGGAGTGCGACCCCGCACCACCGAGCGCCACATCGCGGTGCACAAGCGGCTCGTGCTGGCCT TCGCCGTGTCCATCGTGGCGCTGCTCGCGGTCACCATGCTCGCCGTGCTGCTCAGCCTGCGCTT CGACGAGTGCGGGGCCAGCGCTGCGCCGGGCGCCGACGGGGGCCCCGCGAGCTTCCCAGAGGGC GGCCGCAACGCGAGCCTCCCGGGATCGGCTCGGCGCAACCACCACGCGGGCGGGGACTCCTTGC AGCCGGAGACGAGCGGGGTGGGCACCCCAGAAACCCCCTCTGCCCAGCCGCCGTCGGAGGAGGA GCGGGAGCAGCCGCCCCCCTGGACGCAGCTGCGCCTCTCGGGCCATCTCAAGCCGCTGCACTAC AATCTGATGCTCATCGCCTTCATGGAGAACTTCACCTTCTCCGGGGAGGTCAACGTGGAGATCG CGTGCCGGAACGCCACCCGCTACGTCGTGCTGCACGCTTCCCGGGTGGCGGTGGAGAAGGTGCA GGTGGCGGAGGACCGGGCGGCTGGGGCTGTCCCTGTGGCCGGCTTTTTCCTTTACCCGCAAACC CAGGTTCTGGTGGTAGTGCTCAATAGGACCCTGGACGCGCAGCGAAATTACAACCTGAAGATCA TCTACAACGCCCTCATAGAGAACGAGCTTCTCGGCTTCTTCCGCAGCTCCTACGTGCTCCACGG GGAGAGAAGATTCCTTGGTGTGACACAGTTTTCACCTACACATGCCAGAAAGGCATTTCCATGT TTTGATGAGCCAATCTACAAGGCCACTTTCAAAATCAGCATCAAGCATCAAGCAACCTATTTAT CTCTATCCAACATGCCAGTGGAGACTTCTGTGTTTGAGGAAGATGGATGGGTAACAGATCACTT TTCACAGACCCCTCTCATGTCCACATATTATTTAGCCTGGGCGATTTGCAACTTCACATACAGA GAAACTACTACCAAGAGTGGGGTTGTAGTACGGTTATATGCAAGACCTGATGCGATCAGAAGAG GATCTGGGGACTATGCTCTTCATATTACAAAGAGATTAATAGAATTTTATGAAGACTACTTTAA AGTGCCCTATTCCTTGCCAAAACTAGATCTTTTAGCTGTGCCTAAGCATCCGTATGCTGCTATG GAGAACTGGGGACTAAGTATTTTTGTGGAACAAAGAATACTGCTGGATCCCAGTGTTTCATCTA TTTCTTATTTGCTGGATGTCACCATGGTCATTGTTCATGAGATATGTCACCAGTGGTTTGGTGA CCTTGTGACTCCTGTGTGGTGGGAAGATGTGTGGCTGAAGGAAGGTTTTGCTCACTACTTTGAA TTTGTGGGTACAGACTACCTCTACCCTGGCTGGAACATGGAAAAGCAGAGGTTTCTCACAGACG TTCTGCACGAAGTGATGCTGCTGGATGGTTTGGCCAGCTCCCACCCGGTATCCCAGGAAGTGCT GCAAGCAACAGACATCGACAGGGTGTTTGACTGGATCGCCTACAAAAAGGGTGCTGCTTTAATT AGAATGCTGGCTAATTTTATGGGCCATTCAGTTTTTCAGAGGGGTTTGCAAGATTATTTAACCA TTCATAAGTATGGCAATGCAGCCAGAAATGATCTCTGGAATACATTATCAGAGGCATTAAAAAG GAATGGAAAATATGTAAATATTCAAGAAGTAATGGATCAATGGACACTGCAGATGGGCTATCCT GTCATCACTATCTTGGGAAATACAACAACAGAAAACAAAATAATAATCACCCAACAACATTTTA TTTATGACATCAGTGCTAAAACTAAGGCACACGAACTTCGAAATGACAGTTACCTGTGGCAGAT TCCATTAACTATTGTGGTAGGAAATAGAAGCCATGTGTCTTCAGAAGCAATTATTTGGGTGTCT AACAAATCAGAGCATCACAGAATAACTTATTTGGACAAAGGAAGCTGGATTCTGGGGAACATCA ATCAAACAGGATACTTTAGAGTCAACTATGACCTAAGGAATTGGAGATTATTAATTGATCAGTT AATCAGGAACCATGAGGTTCTTTCTGTCAGTAACCGTGCAGGTTTGATCGACGATGCTTTCAGC CTGGCCAGGGCTGGCTATTTGCCTCAGAATATTCCCCTGGAGATTATCAGATACCTGTCTGAGG AGAAGGATTTTCTTCCTTGGCATGCTGCCAGCCGAGCTCTTTATCCTCTAGATAAATTACTGGA CCGCATGGAAAACTACAATGTCTTCAATGAATATATATTAAAACAAGTTGCAACCACATACATC AAGCTTGGATGGCCAAAAAATAATTTTAATGGATCTCTTGTTCAAGCTTCCTACCAACATGAAG AACTACGCAGAGAGGTGATCATGCTGGCCTGCAGCTTTGGCAACAAGCACTGTCATCAGCAGGC GTCCACTCTTATTTCAGATTGGATTTCCAGCAACAGGAACAGAATACCACTAAATGTTAGAGAC ATCGTCTACTGCACAGGAGTGTCGCTCCTGGATGAGGATGTCTGGGAATTCATATGGATGAAAT TCCACTCCACCACAGCAATTTCTGAAAAGAAGATACTACTGGAGGCCTTAACTTGCAGTGATGA CAGGAATTTATTAAATAGGCTTCTAAATCTGTCCCTGAACTCAGAGGTTGTGCTGGATCAAGAT GCAATTGATGTCATAATTCATGTAGCTCGAAATCCACATGGCCGAGATCTTGCCTGGAAGTTTT TCCGAGATAAATGGAAGATATTAAATACCAGGTATGGAGAAGCATTATTTATGAATTCCAAACT TATCAGTGGAGTTACAGAATTTCTTAATACTGAAGGTGAACTCAAAGAGCTAAAGAACTTCATG AAGAACTACGATGGAGTTGCTGCAGCATCTTTCACACGAGCTGTAGAAACCGTTGAAGCCAATG TCCGCTGGAAAATGCTCTATCAAGATGAGCTTTTCCAATGGCTGGGGAAAGCTCTAAGACACTA ATATGTATCTTTTGCAAACATTTAAACTCAGAATTTTGTGAGAGGATCTACTTTACGTGGAATG AGGAAAATGGCTGAATTTTCAGTGTTAACATGTGGGAGGAATCCTTCTTCTTCTTCTTCTTCTT TTTTTTTTTTTTGGTTTTGGGAGATATTATTTGTTTCATTCATTCCATTTGTTTCTCTACTCGG TGTTCTCTAAAGAAACCTTTGCAAGTGAAACTGGCTGTGGCTGCTTCAGCTGTACATTCCTTGC TGTACAAGACCAAATATGGTAGTGGTGCATGTCAATGTTGCAGTCAGTTTGGAAAATCATATTC AGAATACTCTGTGCATGGATGTGTGGTCTGCCTGTGTTCCAGCATGCTTATTTAAAATGTCCAA CGTTTTATGTGAATATATGTTACATCCAAGATGGGCATTATACAAAAGCACAAAGGTTGTTGGT GACAATCAGTGTTGCAATGAAAGAAAACCTGAAAAGGAATTTATTCTCAGTCTTGGACAATGGA GGGATAAATTAGCTCTGTAAGTAATCATTGTTACTTATTTCAGCATTTGGATTGTCTGGCAATG ATTACTGGTTGATAACTCACTTTCGTTGAGTTAAAGCTGTGTATACATTTAAAAGAAATATAGA TAGTGTATACATATGTACATAGGGGCTGCCATATGTATATAGAATGTTGTACACTGCACATGTG TGGAAAATCTCTTCAGATCAAAGAAAATTTATCTCTTTTTATAAATGAATGGACATTTGGAAGA GGTTTAAAAGAATTTATCTCAATATTATCCTTCTTAATTCCTAAATTCTCGTCTACTCATTTTT CATCTACTTTCCAAATGCTTCTAGTCCATGATGCATTTTAACACAATTTGCTTGTAAACAAACA CCATTATAATTCTCCTAAGTCAATGGCAACCTTGCATATAGATTCTGTCATTGTTTGGTTCAAG TTTCATATTGCACAAAGCAGTTGTGTAAATGTAGAATTGTTAGTGCTGAGAAAGTATTTATTTT TTATCTTGTTTGTCCATCTTATTCTTTTTCTCTTTCCTTTTTTTTTTTTGTACCG
hide sequence
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RefSeq Acc Id: |
XP_005374382 ⟸ XM_005374325 |
- UniProtKB: |
A0A8C2YLX7 (UniProtKB/TrEMBL) |
- Sequence: |
MALDGERGEREEEKIKKKKKKKRKKKKEEEEEGARTSGSPFAATMGEDASALRAGGGGLSDPWA DSVGVRPRTTERHIAVHKRLVLAFAVSIVALLAVTMLAVLLSLRFDECGASAAPGADGGPASFP EGGRNASLPGSARRNHHAGGDSLQPETSGVGTPETPSAQPPSEEEREQPPPWTQLRLSGHLKPL HYNLMLIAFMENFTFSGEVNVEIACRNATRYVVLHASRVAVEKVQVAEDRAAGAVPVAGFFLYP QTQVLVVVLNRTLDAQRNYNLKIIYNALIENELLGFFRSSYVLHGERRFLGVTQFSPTHARKAF PCFDEPIYKATFKISIKHQATYLSLSNMPVETSVFEEDGWVTDHFSQTPLMSTYYLAWAICNFT YRETTTKSGVVVRLYARPDAIRRGSGDYALHITKRLIEFYEDYFKVPYSLPKLDLLAVPKHPYA AMENWGLSIFVEQRILLDPSVSSISYLLDVTMVIVHEICHQWFGDLVTPVWWEDVWLKEGFAHY FEFVGTDYLYPGWNMEKQRFLTDVLHEVMLLDGLASSHPVSQEVLQATDIDRVFDWIAYKKGAA LIRMLANFMGHSVFQRGLQDYLTIHKYGNAARNDLWNTLSEALKRNGKYVNIQEVMDQWTLQMG YPVITILGNTTTENKIIITQQHFIYDISAKTKAHELRNDSYLWQIPLTIVVGNRSHVSSEAIIW VSNKSEHHRITYLDKGSWILGNINQTGYFRVNYDLRNWRLLIDQLIRNHEVLSVSNRAGLIDDA FSLARAGYLPQNIPLEIIRYLSEEKDFLPWHAASRALYPLDKLLDRMENYNVFNEYILKQVATT YIKLGWPKNNFNGSLVQASYQHEELRREVIMLACSFGNKHCHQQASTLISDWISSNRNRIPLNV RDIVYCTGVSLLDEDVWEFIWMKFHSTTAISEKKILLEALTCSDDRNLLNRLLNLSLNSEVVLD QDAIDVIIHVARNPHGRDLAWKFFRDKWKILNTRYGEALFMNSKLISGVTEFLNTEGELKELKN FMKNYDGVAAASFTRAVETVEANVRWKMLYQDELFQWLGKALRH
hide sequence
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RefSeq Acc Id: |
ENSCLAP00000008340 ⟸ ENSCLAT00000008467 |
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2016-08-03 |
Trhde |
thyrotropin releasing hormone degrading enzyme |
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thyrotropin-releasing hormone degrading enzyme |
Symbol and/or name change |
5135510 |
APPROVED |
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