Rangap1 (Ran GTPase activating protein 1)

Gene: Rangap1 (Ran GTPase activating protein 1) Chinchilla lanigera

Analyze

Symbol:

Rangap1

Name:

Ran GTPase activating protein 1

RGD ID:

8703988

Description:

ENCODES a protein that exhibits GTPase activator activity (ortholog); RNA binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to peptide hormone stimulus (ortholog); cellular response to vasopressin (ortholog); negative regulation of protein export from nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH adenylosuccinase lyase deficiency (ortholog); Carotid Artery Injuries (ortholog); common variable immunodeficiency 4 (ortholog); FOUND IN aggresome (ortholog); axon cytoplasm (ortholog); cytoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ran GTPase-activating protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	26,867,812 - 26,890,284 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	26,869,487 - 26,894,192 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenylosuccinase lyase deficiency (ISO)

Carotid Artery Injuries (ISO)

common variable immunodeficiency 4 (ISO)

diffuse large B-cell lymphoma (ISO)

genetic disease (ISO)

nephronophthisis-like nephropathy 1 (ISO)

sciatic neuropathy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to peptide hormone stimulus (ISO)

cellular response to vasopressin (ISO)

negative regulation of protein export from nucleus (ISO)

nuclear export (ISO)

protein sumoylation (ISO)

response to axon injury (ISO)

Cellular Component

aggresome (ISO)

axon cytoplasm (ISO)

cytoplasm (ISO)

cytoplasmic periphery of the nuclear pore complex (ISO)

cytosol (ISO)

dendrite (ISO)

intracellular membrane-bounded organelle (ISO)

kinetochore (ISO)

mitotic spindle (ISO)

nuclear envelope (ISO)

nuclear membrane (ISO)

nuclear pore (ISO)

nuclear pore cytoplasmic filaments (ISO)

perinuclear region of cytoplasm (ISO)

SUMO ligase complex (ISO)

Molecular Function

GTPase activator activity (ISO)

protein binding (ISO)

RNA binding (ISO)

small GTPase binding (ISO)

ubiquitin protein ligase binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

CRM1 export pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Rangap1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	26,867,812 - 26,890,284 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	26,869,487 - 26,894,192 (-)	NCBI	ChiLan1.0	ChiLan1.0

RANGAP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	41,244,779 - 41,302,369 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	41,244,779 - 41,286,187 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	41,640,783 - 41,698,373 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	39,971,561 - 40,012,162 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	39,966,115 - 40,006,716	NCBI
Celera	22	25,447,987 - 25,488,613 (-)	NCBI		Celera
Cytogenetic Map	22	q13.2	NCBI
HuRef	22	24,605,244 - 24,646,120 (-)	NCBI		HuRef
CHM1_1	22	41,600,469 - 41,641,957 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	41,719,708 - 41,781,201 (-)	NCBI		T2T-CHM13v2.0

Rangap1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	81,588,449 - 81,614,120 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	81,588,449 - 81,629,731 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	81,704,248 - 81,730,798 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	81,704,248 - 81,745,530 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	81,534,678 - 81,560,349 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	81,531,508 - 81,557,156 (-)	NCBI		MGSCv36	mm8
Celera	15	83,823,354 - 83,848,746 (-)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	38.21	NCBI

Rangap1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	115,104,820 - 115,130,564 (-)	NCBI		GRCr8
mRatBN7.2	7	113,224,695 - 113,250,441 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	113,224,703 - 113,250,438 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	114,987,321 - 115,013,059 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	117,210,820 - 117,236,558 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	117,180,248 - 117,205,987 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	122,939,266 - 122,967,178 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	122,940,376 - 122,967,178 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	122,913,894 - 122,942,464 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	120,056,065 - 120,080,018 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	120,090,297 - 120,114,248 (-)	NCBI
Celera	7	109,543,716 - 109,569,417 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

RANGAP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	51,078,320 - 51,135,017 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	53,778,242 - 53,834,871 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	22,142,644 - 22,199,268 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	40,233,357 - 40,286,677 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	40,233,357 - 40,272,671 (-)	Ensembl	panpan1.1		panPan2

RANGAP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	23,953,877 - 23,985,622 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	23,953,912 - 24,003,162 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	23,886,012 - 23,917,770 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	24,698,293 - 24,730,051 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	24,698,297 - 24,747,502 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	24,414,746 - 24,446,498 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	24,735,632 - 24,767,361 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	24,910,123 - 24,941,882 (+)	NCBI		UU_Cfam_GSD_1.0

Rangap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	7,585,629 - 7,615,805 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936492	595,938 - 626,213 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936492	595,905 - 626,219 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RANGAP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	7,211,010 - 7,241,003 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	7,210,974 - 7,240,965 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	4,545,694 - 4,555,008 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RANGAP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	23,789,839 - 23,829,653 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	23,788,241 - 23,829,631 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	101,593,587 - 101,634,522 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rangap1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	7,246,193 - 7,277,701 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	7,246,161 - 7,277,702 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005379343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005379344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013511354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01014485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01275353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000025475 ⟹ ENSCLAP00000025229

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955413	26,867,812 - 26,890,284 (-)	Ensembl

RefSeq Acc Id:

XM_005379343 ⟹ XP_005379400

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955413	26,869,487 - 26,890,003 (-)	NCBI

Sequence:

show sequence

GGAACCCCAGAGGGGCCACCATGGCCTGCCGTCTCTTGGGTTAACACCAGATGTGCAGTGGGCT
GAGCCCTGTGCCCCAGTCCCAGAGTCATGCCAGCGGGGGCAGCAGGGAAGTCCCTGGGATGGAT
GGCCTAGACCCCTTAGCCATCTCTGTCCTGTTTGAGGAATGGGGCCCTCAAACAGAGAGCTGCC
CAGATGATCAGGCAGTTTGCAGATCTCCAGGGGAGCCCACCGTTGTGGCCAGCATGGCCTCCGA
AGACATCACCAAGCTGGCAGAGACCTTGGCCAAAACCCAGGTGGCCGGGGGACAGCTGAGCTTC
AAGGGCAAGAGCCTCAAGCTGAACACCGCGGAAGATGCTAAGGACGTGATTAAAGAGATTGAAG
ACTTTGACAGCTTGGAGGCGCTGCGCTTAGAGGGCAACACGGTGGGCGTGGAAGCGGCCCGGGT
CATCGCCAAGGCCTTAGAGAAGAAGTCAGAGTTGAAGCGATGCCACTGGAGCGACATGTTCACA
GGGCGCCTGCGGTCTGAGATCCCCCCGGCACTGATCTCACTAGGGGAGGGACTCATCACCGCTG
GGGCCCAGCTGGTGGAGCTGGACCTGAGTGACAACGCATTTGGTCCCGATGGTGTCCGCGGCTT
CGAGGCTCTGCTCAAGAGCCCAGCGTGCTTCACCCTGCACGAGCTCAAGCTCAACAACTGTGGC
ATGGGCATCGGTGGTGGCAAGATCCTGGCAGCAGCTCTGACCGAGTGTCACCGCAAGTCCAGTG
CCCAAGGCAAGCCGCTGGCCCTGAAGGTCTTTGTGGCCGGCAGGAACCGGCTGGAGAACGACGG
AGCCACTGCCTTGGCAGAAGCTTTTGGGATCATCGGGACACTGAGGGAGGTGCACATGCCGCAG
AACGGGATCAACCACCCTGGTGTCATGGCCCTGGCCCAGGCCTTTGCCATCAACCCCCTGCTGC
AGGTCATCAACCTCAACGACAACACCTTCACTGAGAAGGGCGCGGTGGCCATGGCTGAGACCCT
GAAGACCTTGCGGCAGGTGGAAGTGATCAACTTCGGGGACTGCCTGGTGCGCTCCAAGGGGGCC
GTGGCCATCGCGGACGCTGTGCGCGGGGGTCTGCCCAAGCTCAAGGAGCTAAACCTGTCCTTCT
GTGAAATCAAGCGAGATGCTGCCCTGGCCGTGGCAGAAGCCGTGGCTGACAAGGCCGAGCTGGA
GAAGCTGGACCTCAACGGCAACGCCCTGGGAGAGGAGGGCTGTGAGCAGCTCCAGGAGGTGCTG
GACGGCTTCAACATGGCCAGGGTGCTGGCGTCCCTCAGTGACGACGAGGGTGAGGATGAGGATG
AGGAGGAAGATGAGGAGGAAGGAGAAGAGGACGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGA
AGACGAAGAGGAGGAGCCACAGCAAAGACAAGGAGAGGAACCAGCCACACCCTCGAGGAAGATT
CTGAACTCCAGCACTGGGGAGCCGGCCTCCTCCCTGTCCTCCCCGATGCCTCCCGATGTCTCCA
CTTTCCTGGCCTTCCCCTCCCCTGAGAAGCTGCTGCGCCTTGGGCCCAAGAGCTCAGTGCTGAT
AGCCCAGCAGACTGACACGTCGGACCCGGAGAAGGTGGTCTCCGCCTTCCTGAAGGTGTCGTCA
GTGTTCAAGGACGAGGCCACAGTGAGGACGGCAGTGCAGGATGCAGTAGACGCCCTCATGAGGA
AGGCCTTCGGCTCCTCAGCCTTCAACGCCAACGCCTTCCTCACCAGGCTGCTGGTCCACATGGG
CCTGCTCAAGAGTGAAGACAAGGTCAAGGCCATCACCAACCTCTACGGCCCCCTGATGGCCCTG
AACCACATGGTGCAGCAGGACTATTTTCCCAAGGCCCTTGCGCCCCTGCTGCTGGCCTTTATCA
CCAAGCCCAACGGCGCCCTGGAGTCCTGCTCCTTCGCCCGCCACAGCCTGCTGCAGACGCTTTA
CAAGGTGTAGCCTCCCGGCCACCTCTTCTGTCCCCCGACCCACGCCAGGAACGGGGACCGGGAG
GAACCGAGCTGCAGCCCTTGCGTCCCCAGGACAGGACTCTGACCAGAGGCAGGGAGGGTCTTTG
TTTGATGTCGTGTGGTGTCCCATGTGTACGTCGGTGCGGTGCCTGTGCCCTGTGTCGGGATTGG
GGTTTTTTCTGTCTCCCTGGCCCTGGTCTGTCGTGGGGCGCTGCAGGCTGCTTTGCCATTAAAG
ACTCAAGCCACCTGAGGGTGCCCTGCGCTCCTGGACGCAGCTGCCCCCCGCCCTGCTGTCCTAC
CTCCCGGGCTGCGCCAAAGCCTGGGACATTGCTGTCCACGTGCTCCGCTGTTTCTCTGTGTCAC
GTTGGGCTGCCTTCTACGTGGCCTGGGCCCGCGGCAGCTGCTGTCCCCACTGTGCAAGCCTGTT
GTGTGAACTGAGCGGCCTGTGGAGCAGAGGCCACGGGCTGGGGCTGTCGTGGGGGGCAGGACCC
TAGCCCCTGCTCAGGTGGACCAGAGGAGACACCAGGGGTGCCACCAGGGGTCCAGGAGCGGCAG
GGCCTGCGGCTGTCCTGGCTCCCGCAGCCAGCGGGGGCCGAGCCAGAGGGGACGCTGTGCTAGA
CGCAGGCCTGTTCTGCCCAGGGAGAAAGAGCCATTGCTCTGATGCCAGCGCTGCGTCTGGGGCT
GCCCCCCGAGGACCCCCGTGGGAGGGTGGGGCCAGGCCCGGCAGCCCCGGGGCCACCTTGTGAT
TCCAGTGTGCTCTCTGTGTGTCTGGGCTGTGCCTGGCAGCTTCATGAATAAAGTCACCTGTGGC
AGCTGGGGA

hide sequence

RefSeq Acc Id:

XM_005379344 ⟹ XP_005379401

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955413	26,869,487 - 26,894,192 (-)	NCBI

Sequence:

show sequence

GGACTTCTTTACCCGATGAGCCCCGCGCGCCGAACCGAGGGAAGCCGGCTCGGGCTCGAACAAA
TCAAATCAAAGGAAAGAAACTGCCGGCTTTCAAAATCCTCCTCCTCCGCCATCATCCGCCGCCC
TGCCGAGAGCAGGTGGTGTAGGAGACGCGAGTGACGAGGGACCCCGGGAGCGCGGACAGACAGA
CAGACAGGCGGGCTGGGCACCGGGACCGCTGAACCCAGGGAAGCGACGCGGCCGGACCTGACCT
GACCCCAGATCGGCGTCCGTCCCGCCCGGCTGACGCGCGCGCTCGGATCGCCCCACGCGGCGCC
GCCTGTTCACGTTTGCAGATCTCCAGGGGAGCCCACCGTTGTGGCCAGCATGGCCTCCGAAGAC
ATCACCAAGCTGGCAGAGACCTTGGCCAAAACCCAGGTGGCCGGGGGACAGCTGAGCTTCAAGG
GCAAGAGCCTCAAGCTGAACACCGCGGAAGATGCTAAGGACGTGATTAAAGAGATTGAAGACTT
TGACAGCTTGGAGGCGCTGCGCTTAGAGGGCAACACGGTGGGCGTGGAAGCGGCCCGGGTCATC
GCCAAGGCCTTAGAGAAGAAGTCAGAGTTGAAGCGATGCCACTGGAGCGACATGTTCACAGGGC
GCCTGCGGTCTGAGATCCCCCCGGCACTGATCTCACTAGGGGAGGGACTCATCACCGCTGGGGC
CCAGCTGGTGGAGCTGGACCTGAGTGACAACGCATTTGGTCCCGATGGTGTCCGCGGCTTCGAG
GCTCTGCTCAAGAGCCCAGCGTGCTTCACCCTGCACGAGCTCAAGCTCAACAACTGTGGCATGG
GCATCGGTGGTGGCAAGATCCTGGCAGCAGCTCTGACCGAGTGTCACCGCAAGTCCAGTGCCCA
AGGCAAGCCGCTGGCCCTGAAGGTCTTTGTGGCCGGCAGGAACCGGCTGGAGAACGACGGAGCC
ACTGCCTTGGCAGAAGCTTTTGGGATCATCGGGACACTGAGGGAGGTGCACATGCCGCAGAACG
GGATCAACCACCCTGGTGTCATGGCCCTGGCCCAGGCCTTTGCCATCAACCCCCTGCTGCAGGT
CATCAACCTCAACGACAACACCTTCACTGAGAAGGGCGCGGTGGCCATGGCTGAGACCCTGAAG
ACCTTGCGGCAGGTGGAAGTGATCAACTTCGGGGACTGCCTGGTGCGCTCCAAGGGGGCCGTGG
CCATCGCGGACGCTGTGCGCGGGGGTCTGCCCAAGCTCAAGGAGCTAAACCTGTCCTTCTGTGA
AATCAAGCGAGATGCTGCCCTGGCCGTGGCAGAAGCCGTGGCTGACAAGGCCGAGCTGGAGAAG
CTGGACCTCAACGGCAACGCCCTGGGAGAGGAGGGCTGTGAGCAGCTCCAGGAGGTGCTGGACG
GCTTCAACATGGCCAGGGTGCTGGCGTCCCTCAGTGACGACGAGGGTGAGGATGAGGATGAGGA
GGAAGATGAGGAGGAAGGAGAAGAGGACGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAAGAC
GAAGAGGAGGAGCCACAGCAAAGACAAGGAGAGGAACCAGCCACACCCTCGAGGAAGATTCTGA
ACTCCAGCACTGGGGAGCCGGCCTCCTCCCTGTCCTCCCCGATGCCTCCCGATGTCTCCACTTT
CCTGGCCTTCCCCTCCCCTGAGAAGCTGCTGCGCCTTGGGCCCAAGAGCTCAGTGCTGATAGCC
CAGCAGACTGACACGTCGGACCCGGAGAAGGTGGTCTCCGCCTTCCTGAAGGTGTCGTCAGTGT
TCAAGGACGAGGCCACAGTGAGGACGGCAGTGCAGGATGCAGTAGACGCCCTCATGAGGAAGGC
CTTCGGCTCCTCAGCCTTCAACGCCAACGCCTTCCTCACCAGGCTGCTGGTCCACATGGGCCTG
CTCAAGAGTGAAGACAAGGTCAAGGCCATCACCAACCTCTACGGCCCCCTGATGGCCCTGAACC
ACATGGTGCAGCAGGACTATTTTCCCAAGGCCCTTGCGCCCCTGCTGCTGGCCTTTATCACCAA
GCCCAACGGCGCCCTGGAGTCCTGCTCCTTCGCCCGCCACAGCCTGCTGCAGACGCTTTACAAG
GTGTAGCCTCCCGGCCACCTCTTCTGTCCCCCGACCCACGCCAGGAACGGGGACCGGGAGGAAC
CGAGCTGCAGCCCTTGCGTCCCCAGGACAGGACTCTGACCAGAGGCAGGGAGGGTCTTTGTTTG
ATGTCGTGTGGTGTCCCATGTGTACGTCGGTGCGGTGCCTGTGCCCTGTGTCGGGATTGGGGTT
TTTTCTGTCTCCCTGGCCCTGGTCTGTCGTGGGGCGCTGCAGGCTGCTTTGCCATTAAAGACTC
AAGCCACCTGAGGGTGCCCTGCGCTCCTGGACGCAGCTGCCCCCCGCCCTGCTGTCCTACCTCC
CGGGCTGCGCCAAAGCCTGGGACATTGCTGTCCACGTGCTCCGCTGTTTCTCTGTGTCACGTTG
GGCTGCCTTCTACGTGGCCTGGGCCCGCGGCAGCTGCTGTCCCCACTGTGCAAGCCTGTTGTGT
GAACTGAGCGGCCTGTGGAGCAGAGGCCACGGGCTGGGGCTGTCGTGGGGGGCAGGACCCTAGC
CCCTGCTCAGGTGGACCAGAGGAGACACCAGGGGTGCCACCAGGGGTCCAGGAGCGGCAGGGCC
TGCGGCTGTCCTGGCTCCCGCAGCCAGCGGGGGCCGAGCCAGAGGGGACGCTGTGCTAGACGCA
GGCCTGTTCTGCCCAGGGAGAAAGAGCCATTGCTCTGATGCCAGCGCTGCGTCTGGGGCTGCCC
CCCGAGGACCCCCGTGGGAGGGTGGGGCCAGGCCCGGCAGCCCCGGGGCCACCTTGTGATTCCA
GTGTGCTCTCTGTGTGTCTGGGCTGTGCCTGGCAGCTTCATGAATAAAGTCACCTGTGGCAGCT
GGGGA

hide sequence

RefSeq Acc Id:

XM_013511354 ⟹ XP_013366808

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955413	26,869,487 - 26,890,003 (-)	NCBI

Sequence:

show sequence

GGAACCCCAGAGGGGCCACCATGGCCTGCCGTCTCTTGGGTTAACACCAGATGTGCAGTGGGCT
GAGCCCTGTGCCCCAGTCCCAGAGTCATGCCAGCGGGGGCAGCAGGGAAGTCCCTGGGATGGAT
GGCCTAGACCCCTTAGCCATCTCTGTCCTGTTTGAGGAATGGGGCCCTCAAACAGAGAGCTGCC
CAGATGATCAGGCAGTTTGCAGATCTCCAGGGGAGCCCACCGTTGTGGCCAGCATGGCCTCCGA
AGACATCACCAAGCTGGCAGAGACCTTGGCCAAAACCCAGGTGGCCGGGGGACAGCTGAGCTTC
AAGGGCAAGAGCCTCAAGCTGAACACCGCGGAAGATGCTAAGGACGTGATTAAAGAGATTGAAG
ACTTTGACAGCTTGGAGGCGCTGCGCTTAGAGGGCAACACGGTGGGCGTGGAAGCGGCCCGGGT
CATCGCCAAGGCCTTAGAGAAGAAGTCAGAGTTGAAGCGATGCCACTGGAGCGACATGTTCACA
GGGCGCCTGCGGTCTGAGATCCCCCCGGCACTGATCTCACTAGGGGAGGGACTCATCACCGCTG
GGGCCCAGCTGGTGGAGCTGGACCTGAGTGACAACGCATTTGGTCCCGATGGTGTCCGCGGCTT
CGAGGCTCTGCTCAAGAGCCCAGCGTGCTTCACCCTGCACGAGCTCAAGCTCAACAACTGTGGC
ATGGGCATCGGTGGTGGCAAGATCCTGGCAGCAGCTCTGACCGAGTGTCACCGCAAGTCCAGTG
CCCAAGGCAAGCCGCTGGCCCTGAAGGTCTTTGTGGCCGGCAGGAACCGGCTGGAGAACGACGG
AGCCACTGCCTTGGCAGAAGCTTTTGGGATCATCGGGACACTGAGGGAGGTGCACATGCCGCAG
AACGGGATCAACCACCCTGGTGTCATGGCCCTGGCCCAGGCCTTTGCCATCAACCCCCTGCTGC
AGGTCATCAACCTCAACGACAACACCTTCACTGAGAAGGGCGCGGTGGCCATGGCTGAGACCCT
GAAGACCTTGCGGCAGGTGGAAGTGATCAACTTCGGGGACTGCCTGGTGCGCTCCAAGGGGGCC
GTGGCCATCGCGGACGCTGTGCGCGGGGGTCTGCCCAAGCTCAAGGAGCTAAACCTGTCCTTCT
GTGAAATCAAGCGAGATGCTGCCCTGGCCGTGGCAGAAGCCGTGGCTGACAAGGCCGAGCTGGA
GAAGCTGGACCTCAACGGCAACGCCCTGGGAGAGGAGGGCTGTGAGCAGCTCCAGGAGGTGCTG
GACGGCTTCAACATGGCCAGGGTGCTGGCGTCCCTCAGTGACGACGAGGGTGAGGATGAGGATG
AGGAGGAAGATGAGGAGGAAGGAGAAGAGGACGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGA
AGACGAAGAGGAGGAGCCACAGCAAAGACAAGGAGAGGAACCAGCCACACCCTCGAGGAAGATT
CTGAACTCCAGCACTGGGACTGACACGTCGGACCCGGAGAAGGTGGTCTCCGCCTTCCTGAAGG
TGTCGTCAGTGTTCAAGGACGAGGCCACAGTGAGGACGGCAGTGCAGGATGCAGTAGACGCCCT
CATGAGGAAGGCCTTCGGCTCCTCAGCCTTCAACGCCAACGCCTTCCTCACCAGGCTGCTGGTC
CACATGGGCCTGCTCAAGAGTGAAGACAAGGTCAAGGCCATCACCAACCTCTACGGCCCCCTGA
TGGCCCTGAACCACATGGTGCAGCAGGACTATTTTCCCAAGGCCCTTGCGCCCCTGCTGCTGGC
CTTTATCACCAAGCCCAACGGCGCCCTGGAGTCCTGCTCCTTCGCCCGCCACAGCCTGCTGCAG
ACGCTTTACAAGGTGTAGCCTCCCGGCCACCTCTTCTGTCCCCCGACCCACGCCAGGAACGGGG
ACCGGGAGGAACCGAGCTGCAGCCCTTGCGTCCCCAGGACAGGACTCTGACCAGAGGCAGGGAG
GGTCTTTGTTTGATGTCGTGTGGTGTCCCATGTGTACGTCGGTGCGGTGCCTGTGCCCTGTGTC
GGGATTGGGGTTTTTTCTGTCTCCCTGGCCCTGGTCTGTCGTGGGGCGCTGCAGGCTGCTTTGC
CATTAAAGACTCAAGCCACCTGAGGGTGCCCTGCGCTCCTGGACGCAGCTGCCCCCCGCCCTGC
TGTCCTACCTCCCGGGCTGCGCCAAAGCCTGGGACATTGCTGTCCACGTGCTCCGCTGTTTCTC
TGTGTCACGTTGGGCTGCCTTCTACGTGGCCTGGGCCCGCGGCAGCTGCTGTCCCCACTGTGCA
AGCCTGTTGTGTGAACTGAGCGGCCTGTGGAGCAGAGGCCACGGGCTGGGGCTGTCGTGGGGGG
CAGGACCCTAGCCCCTGCTCAGGTGGACCAGAGGAGACACCAGGGGTGCCACCAGGGGTCCAGG
AGCGGCAGGGCCTGCGGCTGTCCTGGCTCCCGCAGCCAGCGGGGGCCGAGCCAGAGGGGACGCT
GTGCTAGACGCAGGCCTGTTCTGCCCAGGGAGAAAGAGCCATTGCTCTGATGCCAGCGCTGCGT
CTGGGGCTGCCCCCCGAGGACCCCCGTGGGAGGGTGGGGCCAGGCCCGGCAGCCCCGGGGCCAC
CTTGTGATTCCAGTGTGCTCTCTGTGTGTCTGGGCTGTGCCTGGCAGCTTCATGAATAAAGTCA
CCTGTGGCAGCTGGGGA

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Protein Sequences


Protein RefSeqs	XP_005379400	(Get FASTA)	NCBI Sequence Viewer
	XP_005379401	(Get FASTA)	NCBI Sequence Viewer
	XP_013366808	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000025229
	ENSCLAP00000025229.1

RefSeq Acc Id:	XP_005379401 ⟸ XM_005379344
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2W4W8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASEDITKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGVE AARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLSDNAFGPDG VRGFEALLKSPACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRL ENDGATALAEAFGIIGTLREVHMPQNGINHPGVMALAQAFAINPLLQVINLNDNTFTEKGAVAM AETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALAVAEAVADK AELEKLDLNGNALGEEGCEQLQEVLDGFNMARVLASLSDDEGEDEDEEEDEEEGEEDEEEEEEE EEEEDEEEEPQQRQGEEPATPSRKILNSSTGEPASSLSSPMPPDVSTFLAFPSPEKLLRLGPKS SVLIAQQTDTSDPEKVVSAFLKVSSVFKDEATVRTAVQDAVDALMRKAFGSSAFNANAFLTRLL VHMGLLKSEDKVKAITNLYGPLMALNHMVQQDYFPKALAPLLLAFITKPNGALESCSFARHSLL QTLYKV hide sequence

RefSeq Acc Id:	XP_005379400 ⟸ XM_005379343
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2W4W8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCSGLSPVPQSQSHASGGSREVPGMDGLDPLAISVLFEEWGPQTESCPDDQAVCRSPGEPTVVA SMASEDITKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGV EAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLSDNAFGPD GVRGFEALLKSPACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNR LENDGATALAEAFGIIGTLREVHMPQNGINHPGVMALAQAFAINPLLQVINLNDNTFTEKGAVA MAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD KAELEKLDLNGNALGEEGCEQLQEVLDGFNMARVLASLSDDEGEDEDEEEDEEEGEEDEEEEEE EEEEEDEEEEPQQRQGEEPATPSRKILNSSTGEPASSLSSPMPPDVSTFLAFPSPEKLLRLGPK SSVLIAQQTDTSDPEKVVSAFLKVSSVFKDEATVRTAVQDAVDALMRKAFGSSAFNANAFLTRL LVHMGLLKSEDKVKAITNLYGPLMALNHMVQQDYFPKALAPLLLAFITKPNGALESCSFARHSL LQTLYKV hide sequence

RefSeq Acc Id:	XP_013366808 ⟸ XM_013511354
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2W4W8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCSGLSPVPQSQSHASGGSREVPGMDGLDPLAISVLFEEWGPQTESCPDDQAVCRSPGEPTVVA SMASEDITKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGV EAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLSDNAFGPD GVRGFEALLKSPACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNR LENDGATALAEAFGIIGTLREVHMPQNGINHPGVMALAQAFAINPLLQVINLNDNTFTEKGAVA MAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD KAELEKLDLNGNALGEEGCEQLQEVLDGFNMARVLASLSDDEGEDEDEEEDEEEGEEDEEEEEE EEEEEDEEEEPQQRQGEEPATPSRKILNSSTGTDTSDPEKVVSAFLKVSSVFKDEATVRTAVQD AVDALMRKAFGSSAFNANAFLTRLLVHMGLLKSEDKVKAITNLYGPLMALNHMVQQDYFPKALA PLLLAFITKPNGALESCSFARHSLLQTLYKV hide sequence

RefSeq Acc Id:

ENSCLAP00000025229 ⟸ ENSCLAT00000025475

Protein Domains

Ran-GTPase activating protein 1 C-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000017330	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000025475	ENTREZGENE
	ENSCLAT00000025475.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.200	UniProtKB/TrEMBL
	3.80.10.10	UniProtKB/TrEMBL
InterPro	Leu-rich_rpt	UniProtKB/TrEMBL
	LRR_dom_sf	UniProtKB/TrEMBL
	Ran_GTPase_activating_1_C	UniProtKB/TrEMBL
	RanGap	UniProtKB/TrEMBL
	RanGAP1_C_sf	UniProtKB/TrEMBL
NCBI Gene	Rangap1	ENTREZGENE
PANTHER	RAN GTPASE-ACTIVATING PROTEIN 1	UniProtKB/TrEMBL
	RAN GTPASE-ACTIVATING PROTEIN 1	UniProtKB/TrEMBL
Pfam	LRR_6	UniProtKB/TrEMBL
	RanGAP1_C	UniProtKB/TrEMBL
SMART	LRR_RI	UniProtKB/TrEMBL
Superfamily-SCOP	RNI-like	UniProtKB/TrEMBL
	SSF69099	UniProtKB/TrEMBL
UniProt	A0A8C2W4W8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

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