Hspa13 (heat shock protein 70 family, member 13) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Hspa13 (heat shock protein 70 family, member 13) Mus musculus
Analyze
Symbol: Hspa13
Name: heat shock protein 70 family, member 13
RGD ID: 735530
MGI Page MGI
Description: Predicted to enable ATP hydrolysis activity; heat shock protein binding activity; and protein folding chaperone. Predicted to be involved in chaperone cofactor-dependent protein refolding and protein refolding. Predicted to be located in endoplasmic reticulum. Predicted to be active in cytosol; nucleus; and plasma membrane. Is expressed in several structures, including genitourinary system; gut; nervous system; sensory organ; and thymus. Orthologous to human HSPA13 (heat shock protein family A (Hsp70) member 13).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1600002I10Rik; 60kD; AV006182; B230217N24Rik; heat shock 70 kDa protein 13; heat shock protein 70kDa family, member 13; microsomal stress 70 protein ATPase core; microsomal stress-70 protein ATPase core; Stc; Stch; stress 70 protein chaperone microsome-associated 60 kDa protein; stress 70 protein chaperone, microsome-associated, 60kD human homolog; stress 70 protein chaperone, microsome-associated, human homolog; stress-70 protein chaperone microsome-associated 60 kDa protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391675,552,078 - 75,564,575 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1675,542,319 - 75,563,992 (-)EnsemblGRCm39 Ensembl
GRCm381675,755,190 - 75,767,276 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1675,745,431 - 75,767,104 (-)EnsemblGRCm38mm10GRCm38
MGSCv371675,755,435 - 75,767,063 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361675,637,874 - 75,649,458 (-)NCBIMGSCv36mm8
Celera1675,974,819 - 75,986,466 (-)NCBICelera
Cytogenetic Map16C3.1NCBI
cM Map1643.36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
1H-pyrazole  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4,6-tribromophenol  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3H-1,2-dithiole-3-thione  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (EXP)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
Bisphenol B  (ISO)
buspirone  (ISO)
butyric acid  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
cannabidiol  (ISO)
carbon nanotube  (EXP)
celastrol  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
cyproconazole  (EXP)
D-glucose  (EXP)
dicrotophos  (ISO)
dimethylarsinous acid  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP)
fenofibrate  (EXP)
flavonoids  (ISO)
flutamide  (ISO)
formaldehyde  (ISO)
gedunin  (ISO)
genistein  (EXP)
glafenine  (ISO)
glucose  (EXP)
glycidyl methacrylate  (ISO)
gold atom  (ISO)
gold(0)  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
hypochlorous acid  (EXP)
ivermectin  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
mifepristone  (ISO)
nickel atom  (ISO)
nimesulide  (ISO)
paracetamol  (EXP,ISO)
perfluorononanoic acid  (ISO)
phenobarbital  (EXP,ISO)
phlorizin  (EXP)
picoxystrobin  (ISO)
pirinixic acid  (EXP)
potassium dichromate  (EXP)
propiconazole  (EXP)
rac-lactic acid  (ISO)
silicon dioxide  (EXP)
sodium arsenate  (EXP)
sulforaphane  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (EXP,ISO)
thimerosal  (ISO)
triadimefon  (EXP)
trichostatin A  (ISO)
tunicamycin  (EXP)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. A gene expression map of human chromosome 21 orthologues in the mouse. Gitton Y, etal., Nature 2002 Dec 5;420(6915):586-90.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. Human chromosome 21 gene expression atlas in the mouse. Reymond A, etal., Nature 2002 Dec 5;420(6915):582-6.
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9570963   PMID:10349636   PMID:10395793   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:18700840   PMID:18973680   PMID:21873635   PMID:22869728   PMID:32325033   PMID:32547538   PMID:32968282   PMID:34837777  


Genomics

Comparative Map Data
Hspa13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391675,552,078 - 75,564,575 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1675,542,319 - 75,563,992 (-)EnsemblGRCm39 Ensembl
GRCm381675,755,190 - 75,767,276 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1675,745,431 - 75,767,104 (-)EnsemblGRCm38mm10GRCm38
MGSCv371675,755,435 - 75,767,063 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361675,637,874 - 75,649,458 (-)NCBIMGSCv36mm8
Celera1675,974,819 - 75,986,466 (-)NCBICelera
Cytogenetic Map16C3.1NCBI
cM Map1643.36NCBI
HSPA13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382114,371,115 - 14,383,146 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2114,371,115 - 14,383,484 (-)EnsemblGRCh38hg38GRCh38
GRCh372115,743,436 - 15,755,467 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362114,665,307 - 14,677,380 (-)NCBINCBI36Build 36hg18NCBI36
Build 342114,665,309 - 14,677,380NCBI
Celera21900,677 - 912,750 (-)NCBICelera
Cytogenetic Map21q11.2NCBI
HuRef211,113,800 - 1,125,871 (-)NCBIHuRef
CHM1_12115,303,921 - 15,315,993 (-)NCBICHM1_1
T2T-CHM13v2.02112,713,857 - 12,725,888 (-)NCBIT2T-CHM13v2.0
Hspa13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81127,862,717 - 27,876,898 (-)NCBIGRCr8
mRatBN7.21114,375,669 - 14,389,853 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1114,373,275 - 14,389,895 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1123,001,434 - 23,015,613 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01115,727,804 - 15,741,983 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01114,895,675 - 14,909,854 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01114,146,515 - 14,160,697 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1114,144,130 - 14,160,892 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01117,802,649 - 17,816,830 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41114,521,734 - 14,535,915 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11114,521,609 - 14,535,915 (-)NCBI
Celera1114,388,645 - 14,402,826 (-)NCBICelera
Cytogenetic Map11p11NCBI
Hspa13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540716,195,308 - 16,206,100 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540716,195,366 - 16,205,371 (-)NCBIChiLan1.0ChiLan1.0
HSPA13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22210,852,296 - 10,864,421 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1215,686,034 - 5,698,158 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0211,101,715 - 1,113,865 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12114,468,887 - 14,480,986 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2114,468,887 - 14,480,986 (-)Ensemblpanpan1.1panPan2
HSPA13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13111,365,374 - 11,377,896 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3111,367,788 - 11,377,828 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3111,376,570 - 11,389,273 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03111,390,307 - 11,403,009 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3111,389,844 - 11,402,716 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13111,363,132 - 11,375,866 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03111,400,638 - 11,413,475 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03111,797,157 - 11,809,886 (-)NCBIUU_Cfam_GSD_1.0
Hspa13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497112,476,191 - 12,486,942 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365057,394,075 - 7,406,692 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365057,395,962 - 7,406,662 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HSPA13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13179,310,727 - 179,321,491 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113179,309,746 - 179,321,297 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213189,549,394 - 189,560,925 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HSPA13
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1278,136,291 - 78,148,457 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl278,136,170 - 78,148,991 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605075,771,695 - 75,783,945 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hspa13
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247452,840,513 - 2,852,255 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247452,841,736 - 2,851,844 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Hspa13
440 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1433
Count of miRNA genes:547
Interacting mature miRNAs:658
Transcripts:ENSMUST00000046283, ENSMUST00000114244, ENSMUST00000137806
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1357517Bwtn1_mbody weight at necropsy 1 (mouse)Not determined162001932985600826Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
26884416Bzwq5_mbi-zygomatic width QTL 5, 5 week (mouse)163732036284696888Mouse
11522747Eae41_mexperimental allergic encephalomyelitis susceptibility 41 (mouse)164039913478015472Mouse
1357778Diobq_mdiet-induced obesity QTL (mouse)Not determined164219781782331174Mouse
4141212Imraq3_mimmune response to AAV2 QTL 3 (mouse)Not determined164438335078383506Mouse
1301719Remslp3_mrapid eye movement sleep 3 (mouse)Not determined164438335078383506Mouse
14928310Manh80_mmandible shape 80 (mouse)164821984182219841Mouse
1301394Eae11_msusceptibility to experimental allergic encephalomyelitis 11 (mouse)Not determined165356189187562035Mouse
1301364Lith14_mlithogenic gene 14 (mouse)Not determined165566184689661961Mouse
1301125Sluc27_msusceptibility to lung cancer 27 (mouse)Not determined166160864495608764Mouse
4141113Tgq28_mtriglyceride QTL 28 (mouse)Not determined6298664696986646Mouse
1300928Etia_methanol induced activation (mouse)Not determined166331390797314016Mouse
1558740Bpq9_mblood pressure QTL 9 (mouse)Not determined166332733697327472Mouse
1302194Pgia10_mproteoglycan induced arthritis 10 (mouse)Not determined166860072298008968Mouse
1301032Tauph_mtau phosphorylation (mouse)Not determined166907613298008968Mouse
11049573Lmr18b_mleishmaniasis resistance 18b (mouse)166912761198008968Mouse
11049574Lmr18a_mleishmaniasis resistance 18a (mouse)166912761198008968Mouse
4142262Lmr18_mleishmaniasis resistance 18 (mouse)Not determined166912761198008968Mouse
11522753Cocia19_mcocaine-induced activity, QTL 19 (mouse)166925448298008968Mouse
1301598Renf2_mrenal failure 2 (mouse)Not determined167038025298008968Mouse
10412076Pod_mplasticity of ocular dominance (mouse)Not determined167354484584350326Mouse
12880403Sefq1_mstress effect QTL 1 (mouse)167469664378896643Mouse

Markers in Region
AV006182  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381675,755,422 - 75,755,511UniSTSGRCm38
MGSCv371675,755,667 - 75,755,756UniSTSGRCm37
Celera1675,975,051 - 75,975,140UniSTS
Cytogenetic Map16C3.2UniSTS
Whitehead/MRC_RH16826.29UniSTS
UniSTS:237530  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381675,757,597 - 75,757,870UniSTSGRCm38
MGSCv371675,757,842 - 75,758,115UniSTSGRCm37
Celera1675,977,233 - 75,977,506UniSTS
Cytogenetic Map16C3.2UniSTS
Stch  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16C3.2UniSTS
cM Map1647.2UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000046283   ⟹   ENSMUSP00000048817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1675,551,910 - 75,563,709 (-)Ensembl
GRCm38.p6 Ensembl1675,755,022 - 75,766,821 (-)Ensembl
RefSeq Acc Id: ENSMUST00000114244   ⟹   ENSMUSP00000109882
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1675,553,528 - 75,563,679 (-)Ensembl
GRCm38.p6 Ensembl1675,756,640 - 75,766,791 (-)Ensembl
RefSeq Acc Id: ENSMUST00000137806
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1675,556,076 - 75,563,670 (-)Ensembl
GRCm38.p6 Ensembl1675,759,188 - 75,766,782 (-)Ensembl
RefSeq Acc Id: ENSMUST00000232633   ⟹   ENSMUSP00000156320
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1675,542,319 - 75,563,992 (-)Ensembl
GRCm38.p6 Ensembl1675,745,431 - 75,767,104 (-)Ensembl
RefSeq Acc Id: NM_030201   ⟹   NP_084477
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391675,552,078 - 75,563,706 (-)NCBI
GRCm381675,755,190 - 75,766,818 (-)NCBI
MGSCv371675,755,435 - 75,767,063 (-)RGD
Celera1675,974,819 - 75,986,466 (-)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_027492
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391675,552,078 - 75,563,706 (-)NCBI
GRCm381675,755,190 - 75,766,818 (-)NCBI
MGSCv371675,755,435 - 75,767,063 (-)RGD
Celera1675,974,819 - 75,986,466 (-)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006522849   ⟹   XP_006522912
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391675,555,519 - 75,564,575 (-)NCBI
GRCm381675,758,631 - 75,767,276 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_084477   ⟸   NM_030201
- Peptide Label: precursor
- UniProtKB: Q3TII6 (UniProtKB/Swiss-Prot),   Q9D1X5 (UniProtKB/Swiss-Prot),   Q8BM72 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006522912   ⟸   XM_006522849
- Peptide Label: isoform X1
- UniProtKB: D3Z0Y0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000048817   ⟸   ENSMUST00000046283
RefSeq Acc Id: ENSMUSP00000156320   ⟸   ENSMUST00000232633
RefSeq Acc Id: ENSMUSP00000109882   ⟸   ENSMUST00000114244

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BM72-F1-model_v2 AlphaFold Q8BM72 1-471 view protein structure

Promoters
RGD ID:13674242
Promoter ID:EPDNEW_M21270
Type:multiple initiation site
Name:Hspa13_1
Description:Mus musculus heat shock protein 70 family, member 13 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381675,766,791 - 75,766,851EPDNEW
RGD ID:6827136
Promoter ID:MM_KWN:21441
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000114244,   NR_027492_HSPA13,   OTTMUST00000057467,   OTTMUST00000057468
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361675,766,926 - 75,768,002 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1309463 AgrOrtholog
Ensembl Genes ENSMUSG00000032932 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000046283 ENTREZGENE
  ENSMUST00000046283.16 UniProtKB/Swiss-Prot
  ENSMUST00000114244 ENTREZGENE
  ENSMUST00000114244.2 UniProtKB/TrEMBL
  ENSMUST00000232633.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.30.30 UniProtKB/Swiss-Prot
  3.30.420.40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ATPase_NBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Heat_shock_70_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hsp_70_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSPA13 UniProtKB/Swiss-Prot
KEGG Report mmu:110920 UniProtKB/Swiss-Prot
MGD MGI:1309463 ENTREZGENE
NCBI Gene 110920 ENTREZGENE
PANTHER HEAT SHOCK 70 KDA PROTEIN 13 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR19375 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HSP70 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Hspa13 PhenoGen
PRINTS HEATSHOCK70 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE HSP70_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_3 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF53067 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3Z0Y0 ENTREZGENE, UniProtKB/TrEMBL
  HSP13_MOUSE UniProtKB/Swiss-Prot
  Q3TII6 ENTREZGENE
  Q8BM72 ENTREZGENE
  Q9D1X5 ENTREZGENE
UniProt Secondary Q3TII6 UniProtKB/Swiss-Prot
  Q9D1X5 UniProtKB/Swiss-Prot