Tmem33 (transmembrane protein 33) - Rat Genome Database

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Gene: Tmem33 (transmembrane protein 33) Mus musculus
Analyze
Symbol: Tmem33
Name: transmembrane protein 33
RGD ID: 733060
MGI Page MGI
Description: Predicted to be involved in several processes, including endoplasmic reticulum tubular network organization; positive regulation of endoplasmic reticulum unfolded protein response; and regulation of endoplasmic reticulum tubular network organization. Predicted to act upstream of or within innate immune response. Predicted to be located in endoplasmic reticulum membrane; melanosome; and nuclear envelope. Predicted to be active in endoplasmic reticulum. Is expressed in several structures, including central nervous system; nasal cavity epithelium; retina; submandibular gland primordium; and trigeminal nerve. Orthologous to human TMEM33 (transmembrane protein 33).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110006G02Rik; 1600019D15Rik; 2410089A21Rik; 2700052H22Rik; 5430406L04Rik; AA388285; AI314185; AI426615; db83
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39567,417,908 - 67,448,804 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl567,417,908 - 67,448,804 (+)EnsemblGRCm39 Ensembl
GRCm38567,260,565 - 67,291,461 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl567,260,565 - 67,291,461 (+)EnsemblGRCm38mm10GRCm38
MGSCv37567,651,891 - 67,682,700 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36567,539,787 - 67,570,596 (+)NCBIMGSCv36mm8
Celera564,569,775 - 64,594,015 (+)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map536.0NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11591653   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16602821  
PMID:18799693   PMID:21267068   PMID:21873635   PMID:24457600   PMID:25044020   PMID:27113764   PMID:28378742   PMID:29530978   PMID:30457570   PMID:30550785   PMID:31048699   PMID:36114006  
PMID:36417873   PMID:36808153   PMID:38355793  


Genomics

Comparative Map Data
Tmem33
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39567,417,908 - 67,448,804 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl567,417,908 - 67,448,804 (+)EnsemblGRCm39 Ensembl
GRCm38567,260,565 - 67,291,461 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl567,260,565 - 67,291,461 (+)EnsemblGRCm38mm10GRCm38
MGSCv37567,651,891 - 67,682,700 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36567,539,787 - 67,570,596 (+)NCBIMGSCv36mm8
Celera564,569,775 - 64,594,015 (+)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map536.0NCBI
TMEM33
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38441,935,137 - 41,960,803 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl441,935,129 - 41,960,803 (+)EnsemblGRCh38hg38GRCh38
GRCh37441,937,446 - 41,962,820 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36441,631,926 - 41,652,580 (+)NCBINCBI36Build 36hg18NCBI36
Build 34441,778,096 - 41,798,751NCBI
Celera442,381,148 - 42,406,836 (+)NCBICelera
Cytogenetic Map4p13NCBI
HuRef441,259,038 - 41,284,726 (+)NCBIHuRef
CHM1_1441,937,631 - 41,963,316 (+)NCBICHM1_1
T2T-CHM13v2.0441,908,187 - 41,934,614 (+)NCBIT2T-CHM13v2.0
Tmem33
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81441,242,358 - 41,264,586 (-)NCBIGRCr8
mRatBN7.21440,888,485 - 40,910,715 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1440,885,712 - 40,910,715 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1441,234,616 - 41,256,847 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01442,534,696 - 42,556,927 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01441,015,491 - 41,037,722 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01442,537,352 - 42,559,580 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1442,535,701 - 42,560,174 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01442,333,379 - 42,355,562 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41443,495,963 - 43,516,901 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11443,498,867 - 43,519,292 (-)NCBI
Celera1440,042,568 - 40,064,657 (-)NCBICelera
Cytogenetic Map14p11NCBI
Tmem33
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554435,747,699 - 5,773,773 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554435,747,681 - 5,773,759 (-)NCBIChiLan1.0ChiLan1.0
TMEM33
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2342,120,006 - 42,145,850 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1442,313,370 - 42,348,116 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0436,260,669 - 36,281,546 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1442,108,335 - 42,133,910 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl442,108,335 - 42,127,575 (+)Ensemblpanpan1.1panPan2
TMEM33
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11339,013,799 - 39,039,059 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1339,013,855 - 39,052,547 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1338,989,700 - 39,027,859 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01339,504,153 - 39,542,337 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1339,504,178 - 39,542,911 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11339,194,205 - 39,232,343 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01339,305,198 - 39,343,358 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01339,770,675 - 39,808,630 (+)NCBIUU_Cfam_GSD_1.0
Tmem33
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528537,131,680 - 37,159,499 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364829,137,920 - 9,166,860 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364829,138,752 - 9,166,555 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM33
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl833,012,390 - 33,036,993 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1833,012,540 - 33,036,448 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2834,667,109 - 34,688,275 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM33
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1278,402,481 - 8,423,306 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl278,404,044 - 8,423,314 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604754,712,138 - 54,733,780 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem33
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476124,987,555 - 25,014,993 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476124,983,553 - 25,014,582 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tmem33
1068 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3166
Count of miRNA genes:844
Interacting mature miRNAs:1138
Transcripts:ENSMUST00000037918, ENSMUST00000160352, ENSMUST00000161233, ENSMUST00000161369, ENSMUST00000162074, ENSMUST00000162543, ENSMUST00000163028
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5889069387841837Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
4141219W10q16_mweight 10 weeks QTL 16 (mouse)Not determined32133234100777931Mouse
10043995Hbnr9_mHeligmosomoides bakeri nematode resistance 9 (mouse)Not determined53348866767488876Mouse
1301845Lxw4_mlupus BXSB x NZW 4 (mouse)Not determined53569446269694594Mouse
11049561Lmr24e_mleishmaniasis resistance 24e (mouse)53569446269694594Mouse
11049559Lmr24c_mleishmaniasis resistance 24c (mouse)53569446269694594Mouse
11049558Lmr24b_mleishmaniasis resistance 24b (mouse)53569446269694594Mouse
1301223Hdlq7_mHDL QTL 7 (mouse)Not determined53585456869854714Mouse
13464252Ahl10_mage related hearing loss, early onset 10 (mouse)53585456869854714Mouse
4141647Hrvhf1_mheart rate variability, high frequency 1 (mouse)Not determined3643342370433423Mouse
1301170Lith13_mlithogenic gene 13 (mouse)Not determined53649448670494598Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
13464246Ahl11_mage related hearing loss, early onset 11 (mouse)53764377771643896Mouse
1300951Gbvq1_mgallstone bladder volume QTL 1 (mouse)Not determined53811168172111798Mouse
13464245Ahl12_mage related hearing loss, early onset 12 (mouse)53811168172111798Mouse
1301698Pcfm4_mperiosteal circumference and femur length 4 (mouse)Not determined54458584378585965Mouse
13207584Mwmlpt4_mMorris water maze latency to platform, training, 4 (mouse)54632260680322606Mouse
13207588Mwmlpa4_mMorris water maze latency to platform, all, 4 (mouse)54632260680322606Mouse
14746981Manh57_mmandible shape 57 (mouse)54716974281169742Mouse
11041665Lmr24_mleishmaniasis resistance 24 (mouse)552694462107321041Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552694462107321041Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
1301243Bmd2_mbone mineral density 2 (mouse)Not determined555388334100455525Mouse
4142317Rgcs1_mretinal ganglion cell susceptible 1 (mouse)Not determined55388334108762627Mouse
13464248Ahl13_mage related hearing loss, early onset 13 (mouse)55564587489645995Mouse
10043962Obq27_mobesity QTL 27 (mouse)Not determined55628565590285655Mouse
10044005Ahl7_mage related hearing loss 7 (mouse)Not determined55833050292330641Mouse
11040591Lmr3c_mleishmaniasis resistance 3c (mouse)55960280193602980Mouse
11040592Lmr3d_mleishmaniasis resistance 3d (mouse)55960280193602980Mouse
11040589Lmr3a_mleishmaniasis resistance 3a (mouse)55960280193602980Mouse
11040590Lmr3b_mleishmaniasis resistance 3b (mouse)55960280193602980Mouse
1301843Listr1_mlisteriosis resistance 1 (mouse)Not determined56024608194246203Mouse
13464247Ahl14_mage related hearing loss, early onset 14 (mouse)56040306294403160Mouse
11252124Modvl6_mmodifier of vacuolated lens 6 (mouse)56265056896650688Mouse
4142428Modvl1_mmodifier of vacuolated lens 1 (mouse)Not determined6265056896650688Mouse
1301010ahl2_mage related hearing loss 2 (mouse)Not determined56265056896650688Mouse
13464250Ahl15_mage related hearing loss, early onset 15 (mouse)56265056896650688Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse
11049560Lmr24d_mleishmaniasis resistance 24d (mouse)56437487798374996Mouse
12904739M2fscn2_mmodifier 2 of FSCN2 (mouse)566529661100529661Mouse
12904740M1fscn2_mmodifier 1 of Fscn2 (mouse)566529661100529661Mouse

Markers in Region
AI426615  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38567,291,109 - 67,291,260UniSTSGRCm38
MGSCv37567,682,348 - 67,682,499UniSTSGRCm37
Celera564,593,663 - 64,593,814UniSTS
Cytogenetic Map5DUniSTS
Whitehead/MRC_RH5958.08UniSTS
AI314185  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38567,287,163 - 67,287,300UniSTSGRCm38
MGSCv37567,678,402 - 67,678,539UniSTSGRCm37
Celera564,589,717 - 64,589,854UniSTS
Cytogenetic Map5DUniSTS
Whitehead/MRC_RH5957.34UniSTS
UniSTS:235192  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38567,288,785 - 67,289,031UniSTSGRCm38
MGSCv37567,680,024 - 67,680,270UniSTSGRCm37
Celera564,591,339 - 64,591,585UniSTS
Cytogenetic Map5DUniSTS
UniSTS:235193  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38567,268,722 - 67,269,073UniSTSGRCm38
MGSCv37567,659,961 - 67,660,312UniSTSGRCm37
Celera564,577,837 - 64,578,188UniSTS
Cytogenetic Map5DUniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001285452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_028975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC102896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ103460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000037918   ⟹   ENSMUSP00000042852
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl567,417,908 - 67,448,804 (+)Ensembl
GRCm38.p6 Ensembl567,260,565 - 67,291,461 (+)Ensembl
RefSeq Acc Id: ENSMUST00000160352   ⟹   ENSMUSP00000124766
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl567,418,040 - 67,448,804 (+)Ensembl
GRCm38.p6 Ensembl567,260,697 - 67,291,461 (+)Ensembl
RefSeq Acc Id: ENSMUST00000161233   ⟹   ENSMUSP00000124623
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl567,418,039 - 67,425,911 (+)Ensembl
GRCm38.p6 Ensembl567,260,696 - 67,268,568 (+)Ensembl
RefSeq Acc Id: ENSMUST00000161369   ⟹   ENSMUSP00000124390
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl567,418,148 - 67,448,804 (+)Ensembl
GRCm38.p6 Ensembl567,260,805 - 67,291,461 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162074   ⟹   ENSMUSP00000123834
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl567,418,047 - 67,421,622 (+)Ensembl
GRCm38.p6 Ensembl567,260,704 - 67,264,279 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162543   ⟹   ENSMUSP00000124765
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl567,417,994 - 67,421,955 (+)Ensembl
GRCm38.p6 Ensembl567,260,651 - 67,264,612 (+)Ensembl
RefSeq Acc Id: ENSMUST00000163028
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl567,418,239 - 67,426,349 (+)Ensembl
GRCm38.p6 Ensembl567,260,896 - 67,269,006 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201979   ⟹   ENSMUSP00000144531
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl567,418,039 - 67,444,002 (+)Ensembl
GRCm38.p6 Ensembl567,260,696 - 67,286,659 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202324
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl567,418,097 - 67,420,416 (+)Ensembl
GRCm38.p6 Ensembl567,260,754 - 67,263,073 (+)Ensembl
RefSeq Acc Id: NM_001285452   ⟹   NP_001272381
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39567,417,908 - 67,448,804 (+)NCBI
GRCm38567,260,565 - 67,291,461 (+)NCBI
Celera564,569,688 - 64,594,015 (+)NCBI
Sequence:
RefSeq Acc Id: NM_028975   ⟹   NP_083251
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39567,417,908 - 67,448,804 (+)NCBI
GRCm38567,260,565 - 67,291,461 (+)NCBI
MGSCv37567,651,891 - 67,682,700 (+)RGD
Celera564,569,688 - 64,594,015 (+)NCBI
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_030108   ⟹   NP_084384
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39567,417,908 - 67,448,804 (+)NCBI
GRCm38567,260,565 - 67,291,461 (+)NCBI
MGSCv37567,651,891 - 67,682,700 (+)RGD
Celera564,569,688 - 64,594,015 (+)NCBI
cM Map5 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_083251   ⟸   NM_028975
- Peptide Label: isoform 1
- UniProtKB: Q9D3M3 (UniProtKB/Swiss-Prot),   Q544Q3 (UniProtKB/Swiss-Prot),   Q9DAV4 (UniProtKB/Swiss-Prot),   Q9CR67 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_084384   ⟸   NM_030108
- Peptide Label: isoform 2
- UniProtKB: A0A0R4J1Z3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272381   ⟸   NM_001285452
- Peptide Label: isoform 1
- UniProtKB: Q9D3M3 (UniProtKB/Swiss-Prot),   Q544Q3 (UniProtKB/Swiss-Prot),   Q9DAV4 (UniProtKB/Swiss-Prot),   Q9CR67 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000124766   ⟸   ENSMUST00000160352
RefSeq Acc Id: ENSMUSP00000124765   ⟸   ENSMUST00000162543
RefSeq Acc Id: ENSMUSP00000144531   ⟸   ENSMUST00000201979
RefSeq Acc Id: ENSMUSP00000123834   ⟸   ENSMUST00000162074
RefSeq Acc Id: ENSMUSP00000124623   ⟸   ENSMUST00000161233
RefSeq Acc Id: ENSMUSP00000124390   ⟸   ENSMUST00000161369
RefSeq Acc Id: ENSMUSP00000042852   ⟸   ENSMUST00000037918

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9CR67-F1-model_v2 AlphaFold Q9CR67 1-247 view protein structure

Promoters
RGD ID:6886816
Promoter ID:EPDNEW_M6859
Type:initiation region
Name:Tmem33_1
Description:Mus musculus transmembrane protein 33 , transcript variant 3,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38567,260,683 - 67,260,743EPDNEW
RGD ID:6838528
Promoter ID:MM_KWN:42455
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000117764,   NM_030108,   OTTMUST00000069645,   OTTMUST00000069650,   OTTMUST00000069651,   UC008XPR.1,   UC008XPS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36567,651,276 - 67,652,257 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915128 AgrOrtholog
Ensembl Genes ENSMUSG00000037720 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000037918 ENTREZGENE
  ENSMUST00000037918.12 UniProtKB/Swiss-Prot
  ENSMUST00000160352 ENTREZGENE
  ENSMUST00000160352.8 UniProtKB/TrEMBL
  ENSMUST00000161233.8 UniProtKB/TrEMBL
  ENSMUST00000161369 ENTREZGENE
  ENSMUST00000161369.3 UniProtKB/Swiss-Prot
  ENSMUST00000162074.8 UniProtKB/TrEMBL
  ENSMUST00000162543.8 UniProtKB/TrEMBL
  ENSMUST00000201979.4 UniProtKB/TrEMBL
InterPro TMEM33/Pom33 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67878 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1915128 ENTREZGENE
NCBI Gene 67878 ENTREZGENE
PANTHER TRANSMEMBRANE PROTEIN 33 UniProtKB/Swiss-Prot
  TRANSMEMBRANE PROTEIN 33 UniProtKB/Swiss-Prot
  TRANSMEMBRANE PROTEIN 33 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 33 UniProtKB/TrEMBL
Pfam UPF0121 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tmem33 PhenoGen
UniProt A0A0J9YV78_MOUSE UniProtKB/TrEMBL
  A0A0R4J1Z3 ENTREZGENE, UniProtKB/TrEMBL
  E0CXY5_MOUSE UniProtKB/TrEMBL
  E0CYW6_MOUSE UniProtKB/TrEMBL
  Q544Q3 ENTREZGENE
  Q9CR67 ENTREZGENE
  Q9CV90_MOUSE UniProtKB/TrEMBL
  Q9CWD1_MOUSE UniProtKB/TrEMBL
  Q9CZM3_MOUSE UniProtKB/TrEMBL
  Q9D3M3 ENTREZGENE
  Q9DAV4 ENTREZGENE
  TMM33_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q544Q3 UniProtKB/Swiss-Prot
  Q9D3M3 UniProtKB/Swiss-Prot
  Q9DAV4 UniProtKB/Swiss-Prot